Cucsa.349000 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.349000
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	ROP-interactive CRIB motif-containing protein 6, putative
Location	scaffold03487 : 374650 .. 375565 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAATGAGAAAGAAGCTGAGATGAAAATTGGGCATCCAACAGATGTTAAACATGTTGCTCATATTGGTTGGGATGGTCCTTCTGTCAATTCTCCAAGCTGGGTAAGATTTCGAAAATCAATATTGATTTAGTTTTTAACCATATGCATATATAATCAAAATTTGTTCTCAATCTTATATTGTATTGTTTGTCATATAAAACGGGTCACTAATTTTGTAGATGAATGAATTTAAAGCGCCACCATCGTTTTCATCTGCTCCGTTGAGTCTGCATGCCTCTGGAGACAACAAAGAGGATGTTTCTGTTAAATGGGTATCAGAAGGTTTGCTTACTTACTTGTCTGACTCCTCATCAACTTTATTTAAATTTTGTTTAATAAGTCTTTTGACACAATTTTATTTTTTAAAACCAAAAACACATATTGTTCGTCGCACGTTGGTTTAATTTTTTTCAAAATTGAAAATTTGCATTGCACGTAAAAAAATTCTTGAAATTGACACCTTATGAGTTTGTGTGTGTAGATCGTCCTAGCAGAAGAGTAGCGAAGGGTTCAAGTTCATCAGCAAAAAATTTAACGGCGGACGTAACAAAAACATCAAAACACCCTTCTTCTTCCTCCACCACCTCCTCCTCAACGGAGTCTCCCACATGCAGAGAAAGGTCATCGGAAAGACAAAAAACAAGACGATCTTCAAAGTCCAAGGAACCATCGTCGTCGGACAACAACAACAACAACCACTCCCCCACCTTAAGCCTACCGGACGTCCCAAGACAAACCCGTCGCAAGAAAACAACCCGAACCAAACCCCACCTGGCTCCAGAAACTTACAAGTCCCCTCATTCCGACCCTGGCTCCACCACCGCTACCGGCTCCATTTCTTTATCCAAAGACAGCGATCTATGTCAGACCCCTTAA

mRNA sequence

ACAATGAGAAAGAAGCTGAGATGAAAATTGGGCATCCAACAGATGTTAAACATGTTGCTCATATTGGTTGGGATGGTCCTTCTGTCAATTCTCCAAGCTGGATGAATGAATTTAAAGCGCCACCATCGTTTTCATCTGCTCCGTTGAGTCTGCATGCCTCTGGAGACAACAAAGAGGATGTTTCTGTTAAATGGGTATCAGAAGATCGTCCTAGCAGAAGAGTAGCGAAGGGTTCAAGTTCATCAGCAAAAAATTTAACGGCGGACGTAACAAAAACATCAAAACACCCTTCTTCTTCCTCCACCACCTCCTCCTCAACGGAGTCTCCCACATGCAGAGAAAGGTCATCGGAAAGACAAAAAACAAGACGATCTTCAAAGTCCAAGGAACCATCGTCGTCGGACAACAACAACAACAACCACTCCCCCACCTTAAGCCTACCGGACGTCCCAAGACAAACCCGTCGCAAGAAAACAACCCGAACCAAACCCCACCTGGCTCCAGAAACTTACAAGTCCCCTCATTCCGACCCTGGCTCCACCACCGCTACCGGCTCCATTTCTTTATCCAAAGACAGCGATCTATGTCAGACCCCTTAA

Coding sequence (CDS)

ACAATGAGAAAGAAGCTGAGATGAAAATTGGGCATCCAACAGATGTTAAACATGTTGCTCATATTGGTTGGGATGGTCCTTCTGTCAATTCTCCAAGCTGGATGAATGAATTTAAAGCGCCACCATCGTTTTCATCTGCTCCGTTGAGTCTGCATGCCTCTGGAGACAACAAAGAGGATGTTTCTGTTAAATGGGTATCAGAAGATCGTCCTAGCAGAAGAGTAGCGAAGGGTTCAAGTTCATCAGCAAAAAATTTAACGGCGGACGTAACAAAAACATCAAAACACCCTTCTTCTTCCTCCACCACCTCCTCCTCAACGGAGTCTCCCACATGCAGAGAAAGGTCATCGGAAAGACAAAAAACAAGACGATCTTCAAAGTCCAAGGAACCATCGTCGTCGGACAACAACAACAACAACCACTCCCCCACCTTAAGCCTACCGGACGTCCCAAGACAAACCCGTCGCAAGAAAACAACCCGAACCAAACCCCACCTGGCTCCAGAAACTTACAAGTCCCCTCATTCCGACCCTGGCTCCACCACCGCTACCGGCTCCATTTCTTTATCCAAAGACAGCGATCTATGTCAGACCCCTTAA

Protein sequence

NEKEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSKSKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSISLSKDSDLCQTP*

Homology

[Close]

BLAST of Cucsa.349000 vs. Swiss-Prot
Match: RIC7_ARATH (CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana GN=RIC7 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 8.2e-20
Identity = 59/159 (37.11%), Postives = 88/159 (55.35%), Query Frame = 1


Query: 2   EKEAEMKIGHPTDVKHVAHIGWDGPSVN--SPSWMNEFKAPPSFSSAPLSLHASGDNKED 61
           EKE EM+IG+PTDVKHVAHIGWDGPS N  +PSWMN+FK+ P   S        G  ++D
Sbjct: 29  EKEEEMQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDFKSSPVMES------IQGLGEDD 88

Query: 62  VSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQ 121
            SVK  SE     R       S +  +++    +K  S  +   +S +  +    SS R 
Sbjct: 89  SSVKCQSEFGGRTRDLPKLPKSTRKSSSEKGSPTKERSDKTKRRTSNKGTS----SSRRT 148

Query: 122 KTRRSSKSKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKT 159
           K   S+ S   ++ D +++    +  LP+VP++++RKK+
Sbjct: 149 KDEDSTSSSRRTTKDEDSSLSQHSAGLPEVPKKSKRKKS 177

[Close]

BLAST of Cucsa.349000 vs. Swiss-Prot
Match: RIC6_ARATH (CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana GN=RIC6 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.8e-19
Identity = 64/165 (38.79%), Postives = 90/165 (54.55%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSVN--SPSWMNEFKAPPSFSSAPLSLHASGDNKE 60
           +EKE E++IG+PTDVKHVAHIGWDGPS N  +PSWM EF +   F S      A G  ++
Sbjct: 26  SEKEEEIQIGNPTDVKHVAHIGWDGPSANATAPSWMTEFNSGGGFES------AEGVGED 85

Query: 61  DVSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSER 120
           D S+K +SE         G S    NL          P S+   +S   SPT +++SS++
Sbjct: 86  DSSIKCMSE-------YGGRSRDLPNL----------PKSTRKAASEKGSPT-KDKSSDK 145

Query: 121 QKTRRSSKSKEPSS------SDNNNNNHSPTLSLPDVPRQTRRKK 158
            K R S+K    SS      ++  +   S    LP++P+++RRKK
Sbjct: 146 TKRRSSNKGTSSSSRRPKEATEEQDELSSWPSGLPEIPKKSRRKK 166

[Close]

BLAST of Cucsa.349000 vs. Swiss-Prot
Match: RIC8_ARATH (CRIB domain-containing protein RIC8 OS=Arabidopsis thaliana GN=RIC8 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.8e-14
Identity = 67/194 (34.54%), Postives = 85/194 (43.81%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSV--NSPSWMNEFKAPPSFSSAPLSLHASGDNKE 60
           NEKEAEM+IG PTDVKHVAHIGWDG SV  N PSWM +FK    +S A +     G+ KE
Sbjct: 9   NEKEAEMQIGTPTDVKHVAHIGWDGGSVNHNPPSWMKDFKVLGGYSPALI-----GNIKE 68

Query: 61  DVSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSER 120
           D S  +    R SR + +   SS +               SST   S      R R S +
Sbjct: 69  DASCIFEDSTR-SRDIPRLPKSSRER--------------SSTLGGSPTKERSRRRGSSQ 128

Query: 121 -----QKTRRSSKSKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSP 180
                + +RRSSK       D   N  S      D      R+ + R +           
Sbjct: 129 YNGNPKVSRRSSKESSAIPQDGGFNKKSRRKKSKDCVDGGSRRSSRRVRGSQVESI---- 177

Query: 181 HSDPGSTTATGSIS 188
            SD  ST+  G ++
Sbjct: 189 -SDSSSTSDAGYLT 177

[Close]

BLAST of Cucsa.349000 vs. Swiss-Prot
Match: RIC5_ARATH (CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana GN=RIC5 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.5e-13
Identity = 55/167 (32.93%), Postives = 76/167 (45.51%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDV 60
           +EKE EM+IG PTDVKHVAHIGW+GPS  +PSWM++FK                 ++   
Sbjct: 21  DEKEPEMQIGIPTDVKHVAHIGWEGPSATTPSWMHDFKP---------------TDQTKT 80

Query: 61  SVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPT---CRERSSE 120
             K  S  +P      GSS              KH      TS+   SPT    R   S 
Sbjct: 81  ETKGTSNKKP------GSSG------------EKHRKGRRKTSTGNNSPTESPSRVGGSV 140

Query: 121 RQKTRRSSKSKEPSSSDNNNNNHSPTLSLPD------VPRQTRRKKT 159
           R   R + K +E ++   + +     L LP       VP+Q+++KK+
Sbjct: 141 RPSKRNTGKQREQNTGSGSESGSG--LELPQQTDQFVVPKQSKQKKS 152

[Close]

BLAST of Cucsa.349000 vs. Swiss-Prot
Match: RIC3_ARATH (CRIB domain-containing protein RIC3 OS=Arabidopsis thaliana GN=RIC3 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-12
Identity = 59/204 (28.92%), Postives = 89/204 (43.63%), Query Frame = 1


Query: 2   EKEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVS 61
           EK+ +M+IG PTDVKHVAHIG DGP+ N PSWM +FK P    +  +   A  +N +   
Sbjct: 21  EKDKDMQIGFPTDVKHVAHIGSDGPATNVPSWMGDFK-PQENENGQVVSRADANNNQIGE 80

Query: 62  VKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKT 121
              + E  P     K   +  K+ T  V++    P  +S+ S+S   P         + T
Sbjct: 81  GVGLQELLPPTDKPKHKKTRRKSET--VSQNGSPPRRNSSASASDMQP---------KNT 140

Query: 122 RRSSKSKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGST- 181
           RR  +S+  S   +N+         P V R+     TT       P +  S HS   ++ 
Sbjct: 141 RRHHRSRHGSIDSSND---------PSVRRRRVVSVTTNDMEGSYPLSDSSTHSRKSTSR 200

Query: 182 ------TATGSISLSKDSDLCQTP 199
                 +  G +S+ K     + P
Sbjct: 201 HRKPKGSGGGELSMKKTKGKTENP 203

[Close]

BLAST of Cucsa.349000 vs. TrEMBL
Match: A0A0A0KF43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G088140 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 3.1e-106
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1


Query: 7   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 66
           MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS
Sbjct: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 60

Query: 67  EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK 126
           EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK
Sbjct: 61  EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK 120

Query: 127 SKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSI 186
           SKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSI
Sbjct: 121 SKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSI 180

Query: 187 SLSKDSDLCQTP 199
           SLSKDSDLCQTP
Sbjct: 181 SLSKDSDLCQTP 192

[Close]

BLAST of Cucsa.349000 vs. TrEMBL
Match: B9SV18_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0259080 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 8.2e-35
Identity = 95/206 (46.12%), Postives = 128/206 (62.14%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPP-SFSSAPLSLHASGDNKED 60
           NEKE EM+IG+PTDVKHVAHIGWDGPSV SPSWMNEFKAP   FSSAP  L+++G+ KED
Sbjct: 43  NEKEPEMQIGYPTDVKHVAHIGWDGPSVTSPSWMNEFKAPAGGFSSAP--LNSNGEPKED 102

Query: 61  VSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQ 120
            S+ WVSED  SRR ++  S        ++ K S+ P  SST     ESPT RE++ + +
Sbjct: 103 NSITWVSEDSSSRRGSR--SRGIDRDLPELPKASRKP--SSTERLDGESPT-REKTDKPK 162

Query: 121 KTRRSSKSKEPSSSDNNNNNHSPTLS--------LPDVPRQTRRKKTTRTKPHLAPETYK 180
           ++R+SS++     +D  +  HS   S        LPD+P++TRRKK+       A    K
Sbjct: 163 QSRKSSRNATKDLADGKSTRHSKDQSQASDSLSNLPDIPKKTRRKKSKDGSNSKASRA-K 222

Query: 181 SPHSDPGSTTATGSISLSKDSDLCQT 198
           +   D    + +GSIS S + +LC+T
Sbjct: 223 AQALDADCGSDSGSISNSLNGELCET 240

[Close]

BLAST of Cucsa.349000 vs. TrEMBL
Match: U5GNR4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s03680g PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.9e-33
Identity = 92/209 (44.02%), Postives = 124/209 (59.33%), Query Frame = 1


Query: 3   KEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSV 62
           KE EM+IG+PTDVKHVAHIGWDGPS+NSPSWM EFK+PP FSSAPLSL    D+KE+ SV
Sbjct: 25  KEPEMQIGYPTDVKHVAHIGWDGPSINSPSWMTEFKSPPEFSSAPLSL--DQDSKEEGSV 84

Query: 63  KWVSE--DRPSRRV------AKGSSSSAKNLTA-DVTKTSKHPSSSSTTSSSTESPTCRE 122
           KWVSE   R   R       A GS   ++N  A D+ +  K     S+T +S ESP+ +E
Sbjct: 85  KWVSEGSSRKGSRAPNSPPGAPGSPVGSQNSPARDLPELPKSSRRRSSTGTSAESPS-KE 144

Query: 123 RSSERQKTRRSSK--SKEPSSSDNNNNNH-------SPTLSLPDVPRQTRRKKTTRTKPH 182
           +S + +++RRSS+  +K+       + NH        P   LP++P++TRRKK+      
Sbjct: 145 KSDKPKQSRRSSRNGTKDLLDGSKTSRNHKDPSVENKPPSDLPEIPKKTRRKKSKDASVG 204

Query: 183 LAPETYKSPHSDPGSTTATGSISLSKDSD 194
            +    +S    P S    GS  +SK S+
Sbjct: 205 ESSSRSRSRSKVPASEGDEGSEMISKSSN 230

[Close]

BLAST of Cucsa.349000 vs. TrEMBL
Match: M5W154_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023388mg PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.0e-32
Identity = 85/200 (42.50%), Postives = 121/200 (60.50%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPS--VNSPSWMNEFKAPPSFSSAPLSLHASGDNKE 60
           + K  EM+IG PTDVKHVAHIGW+GPS    SPSWMNEF+APP +SS PLS   +G+ KE
Sbjct: 17  DNKGQEMQIGFPTDVKHVAHIGWEGPSTAAGSPSWMNEFQAPPGYSSGPLS---NGETKE 76

Query: 61  DVSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSER 120
           D  VKWVS+D   +  ++G+ S A + T D+ + S   +SS       +SP  RERS + 
Sbjct: 77  DPGVKWVSQDSSRKGSSRGARSPAHD-TPDLPRASPQQTSSGHGDGGIDSPK-RERSDKP 136

Query: 121 QKTRRSSKSKEPSSS---------DNNNNNHSPTLSLPDVPRQTRRKK---------TTR 180
           ++TRRSSK+++ + S         ++ + + SP  + PD+P++TRRKK         + +
Sbjct: 137 KQTRRSSKNRDTTDSITRGIRQSMESIHGSESPQ-NPPDIPKKTRRKKSKDSSVGGASRK 196

[Close]

BLAST of Cucsa.349000 vs. TrEMBL
Match: A0A0A0L7D1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G374200 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.9e-31
Identity = 96/210 (45.71%), Postives = 119/210 (56.67%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDV 60
           NEKE EM+IG PTDVKHVAHIGWDGPSVNSPSWMNEFK P            +GD K+D 
Sbjct: 22  NEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKHP-----------NNGDIKQDA 81

Query: 61  SVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQK 120
           S + VS+D      +K   +       ++ K+SK   SS+   S  ESPT R++ SE+ K
Sbjct: 82  SAQCVSQD------SKRDMAVTSRDMPELPKSSKR-QSSTVGGSVAESPTMRDK-SEKVK 141

Query: 121 TRRSSKSKEPSSSDN----------NNNNHSPTLSLPDVPRQTRRKK------TTRTKPH 180
           +++SSK++E SSSDN          N  + SPT SLP VP++ RRKK      T      
Sbjct: 142 SKKSSKARESSSSDNIGPSRRNSDLNQGSESPTESLPGVPKKGRRKKSKEEGSTKSRSKA 201

Query: 181 LAPETYKSPHSDPGSTTATGSISLSKDSDL 195
            A ET  S  S+  S    GSIS S D DL
Sbjct: 202 TAAETCSSQFSNNASD--VGSISRSNDDDL 210

[Close]

BLAST of Cucsa.349000 vs. TAIR10
Match: AT4G28556.1 (AT4G28556.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 98.6 bits (244), Expect = 4.6e-21
Identity = 59/159 (37.11%), Postives = 88/159 (55.35%), Query Frame = 1


Query: 2   EKEAEMKIGHPTDVKHVAHIGWDGPSVN--SPSWMNEFKAPPSFSSAPLSLHASGDNKED 61
           EKE EM+IG+PTDVKHVAHIGWDGPS N  +PSWMN+FK+ P   S        G  ++D
Sbjct: 29  EKEEEMQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDFKSSPVMES------IQGLGEDD 88

Query: 62  VSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQ 121
            SVK  SE     R       S +  +++    +K  S  +   +S +  +    SS R 
Sbjct: 89  SSVKCQSEFGGRTRDLPKLPKSTRKSSSEKGSPTKERSDKTKRRTSNKGTS----SSRRT 148

Query: 122 KTRRSSKSKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKT 159
           K   S+ S   ++ D +++    +  LP+VP++++RKK+
Sbjct: 149 KDEDSTSSSRRTTKDEDSSLSQHSAGLPEVPKKSKRKKS 177

[Close]

BLAST of Cucsa.349000 vs. TAIR10
Match: AT2G20430.1 (AT2G20430.1 ROP-interactive CRIB motif-containing protein 6)

HSP 1 Score: 97.4 bits (241), Expect = 1.0e-20
Identity = 64/165 (38.79%), Postives = 90/165 (54.55%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSVN--SPSWMNEFKAPPSFSSAPLSLHASGDNKE 60
           +EKE E++IG+PTDVKHVAHIGWDGPS N  +PSWM EF +   F S      A G  ++
Sbjct: 26  SEKEEEIQIGNPTDVKHVAHIGWDGPSANATAPSWMTEFNSGGGFES------AEGVGED 85

Query: 61  DVSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSER 120
           D S+K +SE         G S    NL          P S+   +S   SPT +++SS++
Sbjct: 86  DSSIKCMSE-------YGGRSRDLPNL----------PKSTRKAASEKGSPT-KDKSSDK 145

Query: 121 QKTRRSSKSKEPSS------SDNNNNNHSPTLSLPDVPRQTRRKK 158
            K R S+K    SS      ++  +   S    LP++P+++RRKK
Sbjct: 146 TKRRSSNKGTSSSSRRPKEATEEQDELSSWPSGLPEIPKKSRRKK 166

[Close]

BLAST of Cucsa.349000 vs. TAIR10
Match: AT1G03982.1 (AT1G03982.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 80.9 bits (198), Expect = 9.9e-16
Identity = 67/194 (34.54%), Postives = 85/194 (43.81%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSV--NSPSWMNEFKAPPSFSSAPLSLHASGDNKE 60
           NEKEAEM+IG PTDVKHVAHIGWDG SV  N PSWM +FK    +S A +     G+ KE
Sbjct: 9   NEKEAEMQIGTPTDVKHVAHIGWDGGSVNHNPPSWMKDFKVLGGYSPALI-----GNIKE 68

Query: 61  DVSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSER 120
           D S  +    R SR + +   SS +               SST   S      R R S +
Sbjct: 69  DASCIFEDSTR-SRDIPRLPKSSRER--------------SSTLGGSPTKERSRRRGSSQ 128

Query: 121 -----QKTRRSSKSKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSP 180
                + +RRSSK       D   N  S      D      R+ + R +           
Sbjct: 129 YNGNPKVSRRSSKESSAIPQDGGFNKKSRRKKSKDCVDGGSRRSSRRVRGSQVESI---- 177

Query: 181 HSDPGSTTATGSIS 188
            SD  ST+  G ++
Sbjct: 189 -SDSSSTSDAGYLT 177

[Close]

BLAST of Cucsa.349000 vs. TAIR10
Match: AT3G23380.1 (AT3G23380.1 ROP-interactive CRIB motif-containing protein 5)

HSP 1 Score: 77.8 bits (190), Expect = 8.4e-15
Identity = 55/167 (32.93%), Postives = 76/167 (45.51%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDV 60
           +EKE EM+IG PTDVKHVAHIGW+GPS  +PSWM++FK                 ++   
Sbjct: 21  DEKEPEMQIGIPTDVKHVAHIGWEGPSATTPSWMHDFKP---------------TDQTKT 80

Query: 61  SVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPT---CRERSSE 120
             K  S  +P      GSS              KH      TS+   SPT    R   S 
Sbjct: 81  ETKGTSNKKP------GSSG------------EKHRKGRRKTSTGNNSPTESPSRVGGSV 140

Query: 121 RQKTRRSSKSKEPSSSDNNNNNHSPTLSLPD------VPRQTRRKKT 159
           R   R + K +E ++   + +     L LP       VP+Q+++KK+
Sbjct: 141 RPSKRNTGKQREQNTGSGSESGSG--LELPQQTDQFVVPKQSKQKKS 152

[Close]

BLAST of Cucsa.349000 vs. TAIR10
Match: AT1G04450.1 (AT1G04450.1 ROP-interactive CRIB motif-containing protein 3)

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13
Identity = 59/204 (28.92%), Postives = 89/204 (43.63%), Query Frame = 1


Query: 2   EKEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVS 61
           EK+ +M+IG PTDVKHVAHIG DGP+ N PSWM +FK P    +  +   A  +N +   
Sbjct: 21  EKDKDMQIGFPTDVKHVAHIGSDGPATNVPSWMGDFK-PQENENGQVVSRADANNNQIGE 80

Query: 62  VKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKT 121
              + E  P     K   +  K+ T  V++    P  +S+ S+S   P         + T
Sbjct: 81  GVGLQELLPPTDKPKHKKTRRKSET--VSQNGSPPRRNSSASASDMQP---------KNT 140

Query: 122 RRSSKSKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGST- 181
           RR  +S+  S   +N+         P V R+     TT       P +  S HS   ++ 
Sbjct: 141 RRHHRSRHGSIDSSND---------PSVRRRRVVSVTTNDMEGSYPLSDSSTHSRKSTSR 200

Query: 182 ------TATGSISLSKDSDLCQTP 199
                 +  G +S+ K     + P
Sbjct: 201 HRKPKGSGGGELSMKKTKGKTENP 203

[Close]

BLAST of Cucsa.349000 vs. NCBI nr
Match: gi|700191182|gb|KGN46386.1| (hypothetical protein Csa_6G088140 [Cucumis sativus])

HSP 1 Score: 392.5 bits (1007), Expect = 4.4e-106
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1


Query: 7   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 66
           MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS
Sbjct: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 60

Query: 67  EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK 126
           EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK
Sbjct: 61  EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK 120

Query: 127 SKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSI 186
           SKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSI
Sbjct: 121 SKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSI 180

Query: 187 SLSKDSDLCQTP 199
           SLSKDSDLCQTP
Sbjct: 181 SLSKDSDLCQTP 192

[Close]

BLAST of Cucsa.349000 vs. NCBI nr
Match: gi|659120438|ref|XP_008460194.1| (PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis melo])

HSP 1 Score: 331.3 bits (848), Expect = 1.2e-87
Identity = 176/197 (89.34%), Postives = 182/197 (92.39%), Query Frame = 1


Query: 7   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 66
           M+IG+PTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSL A GDNKEDVSVK VS
Sbjct: 1   MQIGYPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLPAPGDNKEDVSVKGVS 60

Query: 67  EDRPSRRVAKG-SSSSAKNLTAD--VTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRR 126
           EDR SRRV KG SSSSAKNLTAD  VTKTSKHPSSSSTT SST+SPTCRERSSERQKTRR
Sbjct: 61  EDR-SRRVEKGRSSSSAKNLTADDVVTKTSKHPSSSSTTPSSTDSPTCRERSSERQKTRR 120

Query: 127 SSKSKEPSSSDNNNNNHSPTLSLPDVPRQT-RRKKTTRTKPHLAPETYKSPHSDPG-STT 186
           SSKSKE SSS +NNNNHSPTLSLPDVPRQ  RRKKTTRTKPHLAPETYKSP+SDPG STT
Sbjct: 121 SSKSKESSSSSDNNNNHSPTLSLPDVPRQNPRRKKTTRTKPHLAPETYKSPYSDPGASTT 180

Query: 187 ATGSISLSKDSDLCQTP 199
           AT SISLSKD+DLCQTP
Sbjct: 181 ATDSISLSKDTDLCQTP 196

[Close]

BLAST of Cucsa.349000 vs. NCBI nr
Match: gi|223530665|gb|EEF32538.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-34
Identity = 95/206 (46.12%), Postives = 128/206 (62.14%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPP-SFSSAPLSLHASGDNKED 60
           NEKE EM+IG+PTDVKHVAHIGWDGPSV SPSWMNEFKAP   FSSAP  L+++G+ KED
Sbjct: 43  NEKEPEMQIGYPTDVKHVAHIGWDGPSVTSPSWMNEFKAPAGGFSSAP--LNSNGEPKED 102

Query: 61  VSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQ 120
            S+ WVSED  SRR ++  S        ++ K S+ P  SST     ESPT RE++ + +
Sbjct: 103 NSITWVSEDSSSRRGSR--SRGIDRDLPELPKASRKP--SSTERLDGESPT-REKTDKPK 162

Query: 121 KTRRSSKSKEPSSSDNNNNNHSPTLS--------LPDVPRQTRRKKTTRTKPHLAPETYK 180
           ++R+SS++     +D  +  HS   S        LPD+P++TRRKK+       A    K
Sbjct: 163 QSRKSSRNATKDLADGKSTRHSKDQSQASDSLSNLPDIPKKTRRKKSKDGSNSKASRA-K 222

Query: 181 SPHSDPGSTTATGSISLSKDSDLCQT 198
           +   D    + +GSIS S + +LC+T
Sbjct: 223 AQALDADCGSDSGSISNSLNGELCET 240

[Close]

BLAST of Cucsa.349000 vs. NCBI nr
Match: gi|1000945521|ref|XP_015581245.1| (PREDICTED: CRIB domain-containing protein RIC7 [Ricinus communis])

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-34
Identity = 95/206 (46.12%), Postives = 128/206 (62.14%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPP-SFSSAPLSLHASGDNKED 60
           NEKE EM+IG+PTDVKHVAHIGWDGPSV SPSWMNEFKAP   FSSAP  L+++G+ KED
Sbjct: 22  NEKEPEMQIGYPTDVKHVAHIGWDGPSVTSPSWMNEFKAPAGGFSSAP--LNSNGEPKED 81

Query: 61  VSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQ 120
            S+ WVSED  SRR ++  S        ++ K S+ P  SST     ESPT RE++ + +
Sbjct: 82  NSITWVSEDSSSRRGSR--SRGIDRDLPELPKASRKP--SSTERLDGESPT-REKTDKPK 141

Query: 121 KTRRSSKSKEPSSSDNNNNNHSPTLS--------LPDVPRQTRRKKTTRTKPHLAPETYK 180
           ++R+SS++     +D  +  HS   S        LPD+P++TRRKK+       A    K
Sbjct: 142 QSRKSSRNATKDLADGKSTRHSKDQSQASDSLSNLPDIPKKTRRKKSKDGSNSKASRA-K 201

Query: 181 SPHSDPGSTTATGSISLSKDSDLCQT 198
           +   D    + +GSIS S + +LC+T
Sbjct: 202 AQALDADCGSDSGSISNSLNGELCET 219

[Close]

BLAST of Cucsa.349000 vs. NCBI nr
Match: gi|566156070|ref|XP_006386214.1| (hypothetical protein POPTR_0002s03680g [Populus trichocarpa])

HSP 1 Score: 149.1 bits (375), Expect = 8.4e-33
Identity = 92/209 (44.02%), Postives = 124/209 (59.33%), Query Frame = 1


Query: 3   KEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSV 62
           KE EM+IG+PTDVKHVAHIGWDGPS+NSPSWM EFK+PP FSSAPLSL    D+KE+ SV
Sbjct: 25  KEPEMQIGYPTDVKHVAHIGWDGPSINSPSWMTEFKSPPEFSSAPLSL--DQDSKEEGSV 84

Query: 63  KWVSE--DRPSRRV------AKGSSSSAKNLTA-DVTKTSKHPSSSSTTSSSTESPTCRE 122
           KWVSE   R   R       A GS   ++N  A D+ +  K     S+T +S ESP+ +E
Sbjct: 85  KWVSEGSSRKGSRAPNSPPGAPGSPVGSQNSPARDLPELPKSSRRRSSTGTSAESPS-KE 144

Query: 123 RSSERQKTRRSSK--SKEPSSSDNNNNNH-------SPTLSLPDVPRQTRRKKTTRTKPH 182
           +S + +++RRSS+  +K+       + NH        P   LP++P++TRRKK+      
Sbjct: 145 KSDKPKQSRRSSRNGTKDLLDGSKTSRNHKDPSVENKPPSDLPEIPKKTRRKKSKDASVG 204

Query: 183 LAPETYKSPHSDPGSTTATGSISLSKDSD 194
            +    +S    P S    GS  +SK S+
Sbjct: 205 ESSSRSRSRSKVPASEGDEGSEMISKSSN 230

The following BLAST results are available for this feature:

BLAST of Cucsa.349000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RIC7_ARATH	8.2e-20	37.11	CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana GN=RIC7 PE=1 SV=1	[more]
RIC6_ARATH	1.8e-19	38.79	CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana GN=RIC6 PE=1 SV=1	[more]
RIC8_ARATH	1.8e-14	34.54	CRIB domain-containing protein RIC8 OS=Arabidopsis thaliana GN=RIC8 PE=2 SV=1	[more]
RIC5_ARATH	1.5e-13	32.93	CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana GN=RIC5 PE=1 SV=1	[more]
RIC3_ARATH	2.2e-12	28.92	CRIB domain-containing protein RIC3 OS=Arabidopsis thaliana GN=RIC3 PE=1 SV=1	[more]

BLAST of Cucsa.349000 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF43_CUCSA	3.1e-106	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G088140 PE=4 SV=1	[more]
B9SV18_RICCO	8.2e-35	46.12	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0259080 PE=4 SV=1	[more]
U5GNR4_POPTR	5.9e-33	44.02	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s03680g PE=4 SV=1	[more]
M5W154_PRUPE	5.0e-32	42.50	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023388mg PE=4 SV=1	[more]
A0A0A0L7D1_CUCSA	1.9e-31	45.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G374200 PE=4 SV=1	[more]

BLAST of Cucsa.349000 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28556.1	4.6e-21	37.11	PAK-box/P21-Rho-binding family protein	[more]
AT2G20430.1	1.0e-20	38.79	ROP-interactive CRIB motif-containing protein 6	[more]
AT1G03982.1	9.9e-16	34.54	PAK-box/P21-Rho-binding family protein	[more]
AT3G23380.1	8.4e-15	32.93	ROP-interactive CRIB motif-containing protein 5	[more]
AT1G04450.1	1.2e-13	28.92	ROP-interactive CRIB motif-containing protein 3	[more]

BLAST of Cucsa.349000 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700191182\|gb\|KGN46386.1\|	4.4e-106	100.00	hypothetical protein Csa_6G088140 [Cucumis sativus]	[more]
gi\|659120438\|ref\|XP_008460194.1\|	1.2e-87	89.34	PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis melo]	[more]
gi\|223530665\|gb\|EEF32538.1\|	1.2e-34	46.12	conserved hypothetical protein [Ricinus communis]	[more]
gi\|1000945521\|ref\|XP_015581245.1\|	1.2e-34	46.12	PREDICTED: CRIB domain-containing protein RIC7 [Ricinus communis]	[more]
gi\|566156070\|ref\|XP_006386214.1\|	8.4e-33	44.02	hypothetical protein POPTR_0002s03680g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000095	CRIB_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009860	pollen tube growth
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016324	apical plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.349000.1	Cucsa.349000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000095	CRIB domain	GENE3D	G3DSA:3.90.810.10		coord: 2..38 score: 4.6
IPR000095	CRIB domain	PFAM	PF00786	PBD	coord: 8..39 score: 4.
IPR000095	CRIB domain	SMART	SM00285	PBD_5	coord: 9..40 score: 4.
IPR000095	CRIB domain	PROFILE	PS50108	CRIB	coord: 9..22 score: 8
None	No IPR available	PANTHER	PTHR23177	MKIAA1688 PROTEIN	coord: 141..160 score: 4.4E-29coord: 1..76 score: 4.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.349000	Cla021507	Watermelon (97103) v1	cgywmB625
Cucsa.349000	Csa6G088140	Cucumber (Chinese Long) v2	cgycuB490
Cucsa.349000	Csa3G134890	Cucumber (Chinese Long) v2	cgycuB489
Cucsa.349000	MELO3C022379	Melon (DHL92) v3.5.1	cgymeB564
Cucsa.349000	ClCG06G001550	Watermelon (Charleston Gray)	cgywcgB595
Cucsa.349000	CSPI06G07120	Wild cucumber (PI 183967)	cgycpiB517
Cucsa.349000	CSPI03G11800	Wild cucumber (PI 183967)	cgycpiB516
Cucsa.349000	CmaCh17G013850	Cucurbita maxima (Rimu)	cgycmaB0951
Cucsa.349000	CmoCh17G013380	Cucurbita moschata (Rifu)	cgycmoB0951
Cucsa.349000	Lsi09G017900	Bottle gourd (USVL1VR-Ls)	cgylsiB562
Cucsa.349000	Cp4.1LG12g10050	Cucurbita pepo (Zucchini)	cgycpeB0907
Cucsa.349000	Cp4.1LG17g09430	Cucurbita pepo (Zucchini)	cgycpeB0911
Cucsa.349000	MELO3C022379.2	Melon (DHL92) v3.6.1	cgymedB565
Cucsa.349000	CsaV3_3G011950	Cucumber (Chinese Long) v3	cgycucB531
Cucsa.349000	CsaV3_6G007520	Cucumber (Chinese Long) v3	cgycucB532
Cucsa.349000	Cla97C06G110830	Watermelon (97103) v2	cgywmbB596
Cucsa.349000	Carg11549	Silver-seed gourd	carcgyB0012
Cucsa.349000	Carg03793	Silver-seed gourd	carcgyB1099

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cucsa.349000	Cucsa.255540	Cucumber (Gy14) v1	cgycgyB129

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.349000	Wax gourd	cgywgoB696
Cucsa.349000	Cucurbita maxima (Rimu)	cgycmaB0955
Cucsa.349000	Cucurbita moschata (Rifu)	cgycmoB0955
Cucsa.349000	Watermelon (97103) v1	cgywmB626