Cucsa.259720 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTCAGGCAAAAGCGGAGAAGAGAGATGGAGGAGAACGGAGGAAGCGACGCTGGTAGCAACGCCCATTGGTGGTGGGCTTTCGCCGGTGCAGCGCAGTTAGGTTGGGGTATCGCCTCTTTCCGGCGAGGATTTATCGGTGATTCCAGCAACATGCCCCTCAAGGCCTTCGCCGTCGCTTCGCTTTTCGTCGGCGCTGCCGCCTCGTCTACAATTGCTTCCCTCAAGGCCTCTGGCATCCACAAGGTTCACCTCACTGCTTTTCTACTGTGTATTTATCAGTCGCATTTTTTCTTCTTCCCTCCCCCTCATCCTGGATTAGGTTAGAGGTTAATTGGACGACTTTGATCAGTCTGGTTTTGTACTCGTATCGGACTTTGGTGAATTAACTGAACAGATTAGTTTTGATTCGTCAGTATGCCGTGAATTTAGCTAATTTCCAGGAGGAATGGGATTTTGAGTTTTTGGCAGCTTAGTTAGCTTAATTTGTTAATGTTTGATTCGAACTATCAACCTTGTTGAAGTGAACAGTGAAATTGATCAGGGGATGAAAAAATACTTCAGTGGGTGTCAGTTTCTTTGGTCGCATTAGATTATTTGTTGCTGATGCCTGATTTTAGTCATGCTGTTTATCTTGGGCAGTTTGTTCGCTTGGCTTGATGTTGTGCTTAAATTCGAGAATCTTCTTAGTTGAATTTAGGTGTTTTGATTTTGAGTGGTTGATTCATGCCTATTTTTCATGTCGTTTTTTtCTGTTGGTATTATCCGCTTCTTTAAATTTAGAGGTTTAGGGTGTGGGATAAAACTAAAAGTTCTAACTTTCATAAACCTCATTTCAAAACTACTCATAGAATATAATATTTTAGAATGTTGAACAGAAAGTGTAATGATGGAGTTAAGTCTAAAAGAATGACATTCAAGCACAAACCTTTTGTCCAAAATTCTAATGTTTTTTCTACTTCAAGATAATTTTGAAACCTTTATGGAGCATTTTTTAATAAAGGACAAAGTTCAAGAGTGTTTTTTtCAAATAAAaTAAAATATAGTCTAAATTCTGGTACACTTGGAAACCGCATACAAGTTGAGGCTTTGCCTCCTTCAAGTGGCAATCCTTATGGTAAAGGTTTGATGCTTTGGGTGGGAATTTAACCTTTCATTGTCTTTCCGTAGAAAGCGGTGTTGAACTCAATTCTGAAGCCTTCTGTCAGTTCAATGCACAAGTAACAGATGCTTTTTTCGGTTAATAAGAATAACTGTAGAGTATCTGTTGTTTGTTTAGGAGTATGAATGGTTTATTTGTTTGTTTTTAATATCATAGCTTCACTGTAATTGGTATGTGATAGGCAGAGGTAATTTGAACATATTAAGAGCGATGCTTTTTCACATAGGTGAAAGCCTCCATGATCAACAAGGTGGTAGGTAGCATTCATGGTTATGAGAGGCTTGTGATATAGAAATAGGATATCGATGACACTGTTATGAACTTAGAAGAACTTTGACGACCAGAAATGGTTTTCCTTTtCCCTTGTTGTTCTAATGGGTGAACAAACGAAGCCATTGTTATCAGTTCTTACAAAATCATGGGTTGGCGAAACGATTTCAATGGATGCAGAATTTCTTAAGAAGTGTTTTGATCTGGACGAAAGAAAAGGAGAACACGTCTGAAAAAGAAATTTACTAGATCTAGAAATGGGTGATGAAGTGAATGGTACGATTACTAATGTTTGGTTTTGGGGTGTACTGGAACAGGTGGAAGACGTGATGGAAGTAGGGGCCAGAATCAGAAGTGGATTGGGGATTCGTTCAAGGGCACAAGATAAATGAATAAATGAATATGGCAGCCTTTGTTATTCTATTCTGTGGGTAACTGGGAACATCTTCACTTTCACTTTGAGGAGTGCATATTCTCACCCACATGAGTCAACTAAAGTCATTCCATAGCAGACTGAGCACTTTCTTCGATGGTGAAAGAGTCACGAAGGGTCAGATTCCATTTTTCTTTATCAACCCTTAATTTGGTACTTCCTCTTATAGAGAGGTCTCCTATAATTATTTTGCTGTGTAGCAATGATATCAGATAACTGATTAAGGGCTTAGAAAGTTCTTCTAAATTGCCCTTAATTTACTTTAGATGTCCAACCTTCCTAAAGCAGCGATTTCTTTCTTCATTTAAGTAAAATCCTCTGCCGATT AGTCAGGCAAAAGCGGAGAAGAGAGATGGAGGAGAACGGAGGAAGCGACGCTGGTAGCAACGCCCATTGGTGGTGGGCTTTCGCCGGTGCAGCGCAGTTAGGTTGGGGTATCGCCTCTTTCCGGCGAGGATTTATCGGTGATTCCAGCAACATGCCCCTCAAGGCCTTCGCCGTCGCTTCGCTTTTCGTCGGCGCTGCCGCCTCGTCTACAATTGCTTCCCTCAAGGCCTCTGGCATCCACAAGGTGGAAGACGTGATGGAAGTAGGGGCCAGAATCAGAAGTGGATTGGGGATTCGTTCAAGGGCACAAGATAAATGAATAAATGAATATGGCAGCCTTTGTTATTCTATTCTGTGGGTAACTGGGAACATCTTCACTTTCACTTTGAGGAGTGCATATTCTCACCCACATGAGTCAACTAAAGTCATTCCATAGCAGACTGAGCACTTTCTTCGATGGTGAAAGAGTCACGAAGGGTCAGATTCCATTTTTCTTTATCAACCCTTAATTTGGTACTTCCTCTTATAGAGAGGTCTCCTATAATTATTTTGCTGTGTAGCAATGATATCAGATAACTGATTAAGGGCTTAGAAAGTTCTTCTAAATTGCCCTTAATTTACTTTAGATGTCCAACCTTCCTAAAGCAGCGATTTCTTTCTTCATTTAAGTAAAATCCTCTGCCGATT ATGGAGGAGAACGGAGGAAGCGACGCTGGTAGCAACGCCCATTGGTGGTGGGCTTTCGCCGGTGCAGCGCAGTTAGGTTGGGGTATCGCCTCTTTCCGGCGAGGATTTATCGGTGATTCCAGCAACATGCCCCTCAAGGCCTTCGCCGTCGCTTCGCTTTTCGTCGGCGCTGCCGCCTCGTCTACAATTGCTTCCCTCAAGGCCTCTGGCATCCACAAGGTGGAAGACGTGATGGAAGTAGGGGCCAGAATCAGAAGTGGATTGGGGATTCGTTCAAGGGCACAAGATAAATGA MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAASSTIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK*
BLAST of Cucsa.259720 vs. TrEMBL
Match: A0A0A0L700_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118070 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 2.1e-47 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1
BLAST of Cucsa.259720 vs. TrEMBL
Match: F6GV86_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02030 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 6.2e-28 Identity = 63/93 (67.74%), Postives = 74/93 (79.57%), Query Frame = 1
BLAST of Cucsa.259720 vs. TrEMBL
Match: A0A0D2QYT2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G039500 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 4.0e-27 Identity = 63/97 (64.95%), Postives = 77/97 (79.38%), Query Frame = 1
BLAST of Cucsa.259720 vs. TrEMBL
Match: A0A0B0PN24_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_12557 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 5.3e-27 Identity = 62/97 (63.92%), Postives = 77/97 (79.38%), Query Frame = 1
BLAST of Cucsa.259720 vs. TrEMBL
Match: V4U8X0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023020mg PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.2e-25 Identity = 60/92 (65.22%), Postives = 72/92 (78.26%), Query Frame = 1
BLAST of Cucsa.259720 vs. TAIR10
Match: AT3G60480.1 (AT3G60480.1 unknown protein) HSP 1 Score: 108.2 bits (269), Expect = 2.9e-24 Identity = 50/102 (49.02%), Postives = 70/102 (68.63%), Query Frame = 1
BLAST of Cucsa.259720 vs. NCBI nr
Match: gi|449431982|ref|XP_004133779.1| (PREDICTED: uncharacterized protein LOC101221895 [Cucumis sativus]) HSP 1 Score: 196.1 bits (497), Expect = 3.0e-47 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1
BLAST of Cucsa.259720 vs. NCBI nr
Match: gi|659074821|ref|XP_008437814.1| (PREDICTED: uncharacterized protein LOC103483131 [Cucumis melo]) HSP 1 Score: 188.3 bits (477), Expect = 6.2e-45 Identity = 92/97 (94.85%), Postives = 93/97 (95.88%), Query Frame = 1
BLAST of Cucsa.259720 vs. NCBI nr
Match: gi|1009140453|ref|XP_015887660.1| (PREDICTED: uncharacterized protein LOC107422691 [Ziziphus jujuba]) HSP 1 Score: 136.3 bits (342), Expect = 2.8e-29 Identity = 63/93 (67.74%), Postives = 75/93 (80.65%), Query Frame = 1
BLAST of Cucsa.259720 vs. NCBI nr
Match: gi|225453438|ref|XP_002275512.1| (PREDICTED: uncharacterized protein LOC100266789 [Vitis vinifera]) HSP 1 Score: 131.3 bits (329), Expect = 9.0e-28 Identity = 63/93 (67.74%), Postives = 74/93 (79.57%), Query Frame = 1
BLAST of Cucsa.259720 vs. NCBI nr
Match: gi|823146835|ref|XP_012473321.1| (PREDICTED: uncharacterized protein LOC105790317 [Gossypium raimondii]) HSP 1 Score: 128.6 bits (322), Expect = 5.8e-27 Identity = 63/97 (64.95%), Postives = 77/97 (79.38%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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