Cp4.1LG03g15780 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAGAACGGAGGAAGCGACGGTGTTAGCAACGCCCACTGGTGGTGGGCTTTGGCCGGCGCAACACAGCTTGGTTGGGGTATCGCCTCTTTTCGGCGAGGATTGATCGGCAATTCCAGCCTCATGCCCTTAAAGGCCTTCGCCGTTGCTTCGCTTTTCGTCGGCGGCGGCGCCTCGTGTGCCATCGCTTCCCTCAAGGCCTCTGGCATCCACAAGGTTCACTTCACTTCACTTCACTTCACTTCACTTCTTTCACACTGCATTTACCAGTCGCGTTTCTTCATTTCTGGAATTAGGTTACACGTTAATTCGGTACACTTATCAATCTGGTTATGTACTCGTATCGGCATTTGCAGAATTAACTGAGCAAACCAAATCTCATTTGTCAGTATACTGTGAATTTAGGTATTATTCAGGAGATATGCAAGTTAGCTTGGTTAATTTTTAATTGAACTATCAATTTCGTTGAATTGAATACTGAAATGGAACAAGGAATGAACCTAATATAGGAGGAGTTCCACTCATTGTTGTGAGTCTTAAGTTTTTTAGGATACTTTGTTCCTGATATTAGTCGTGTTGTTTACTTTGAGCATCTTTTTTCACCTGGCTTGATGTTAGAATTTAGTAAATTTTTTCTCAGGTTTTTGAGTATTGGATGGTTTATGCATAAATTTTGAATCCAGGGTTTGATTAGTAGTTTTTGGTTTTGGTTGGGGTGCATTGGAACAGGTGGAAGACGTGATGGAAGTAGGGGCTAGTATTAGGAGTGGATTGGGGATTCGTCCAAGGCCACAAGATGAATGAATCTTATTCTATTCTATTGGTAACCTGAGAACATCTTCTCCTTCACCTTCACCTTCTCCTTCACCTTCACTTTCAGGAATCCAAATTCATACCACAGACGACTGTGCACCTTCTTTGATGGTGAAACAGTCACGAGGGGTCCGATTCCTTAATTAAAGGACTCCTGAAATTATTTTGTGTGTACCACTGAAATGGCATTAAGGATTAAGAACCTGTTGGAATCACTTTTTTCTATCTCCATTACTTTACTTCACTGCTTACTTTTATATGTCCATGACCTTCCTTCGCTTACATTTCCTTTTTTTCCTTCTATTTTGGTAAAATCATCTTTTCTGAATCTGTCAATCTTGGTAAAATCCTCATGACTTCCAAGAATACAATAGATTTACTGTGCGTAATTGACCTCATAAGCCTACTGCTATAAGCATAA ATGGAGGAGAACGGAGGAAGCGACGGTGTTAGCAACGCCCACTGGTGGTGGGCTTTGGCCGGCGCAACACAGCTTGGTTGGGGTATCGCCTCTTTTCGGCGAGGATTGATCGGCAATTCCAGCCTCATGCCCTTAAAGGCCTTCGCCGTTGCTTCGCTTTTCGTCGGCGGCGGCGCCTCGTGTGCCATCGCTTCCCTCAAGGCCTCTGGCATCCACAAGGTTCACTTCACTTCACTTCACTTCACTTCACTTCTTTCACACTGCATTTACCAGTCGCGTTTCTTCATTTCTGGAATTAGGTTACACGTTAATTCGGTGGAAGACGTGATGGAAGTAGGGGCTAGTATTAGGAGTGGATTGGGGATTCGTCCAAGGCCACAAGATGAATGAATCTTATTCTATTCTATTGGTAACCTGAGAACATCTTCTCCTTCACCTTCACCTTCTCCTTCACCTTCACTTTCAGGAATCCAAATTCATACCACAGACGACTGTGCACCTTCTTTGATGGTGAAACAGTCACGAGGGGTCCGATTCCTTAATTAAAGGACTCCTGAAATTATTTTGTGTGTACCACTGAAATGGCATTAAGGATTAAGAACCTGTTGGAATCACTTTTTTCTATCTCCATTACTTTACTTCACTGCTTACTTTTATATGTCCATGACCTTCCTTCGCTTACATTTCCTTTTTTTCCTTCTATTTTGGTAAAATCATCTTTTCTGAATCTGTCAATCTTGGTAAAATCCTCATGACTTCCAAGAATACAATAGATTTACTGTGCGTAATTGACCTCATAAGCCTACTGCTATAAGCATAA ATGGAGGAGAACGGAGGAAGCGACGGTGTTAGCAACGCCCACTGGTGGTGGGCTTTGGCCGGCGCAACACAGCTTGGTTGGGGTATCGCCTCTTTTCGGCGAGGATTGATCGGCAATTCCAGCCTCATGCCCTTAAAGGCCTTCGCCGTTGCTTCGCTTTTCGTCGGCGGCGGCGCCTCGTGTGCCATCGCTTCCCTCAAGGCCTCTGGCATCCACAAGGTTCACTTCACTTCACTTCACTTCACTTCACTTCTTTCACACTGCATTTACCAGTCGCGTTTCTTCATTTCTGGAATTAGGTTACACGTTAATTCGGTGGAAGACGTGATGGAAGTAGGGGCTAGTATTAGGAGTGGATTGGGGATTCGTCCAAGGCCACAAGATGAATGA MEENGGSDGVSNAHWWWALAGATQLGWGIASFRRGLIGNSSLMPLKAFAVASLFVGGGASCAIASLKASGIHKVHFTSLHFTSLLSHCIYQSRFFISGIRLHVNSVEDVMEVGASIRSGLGIRPRPQDE
BLAST of Cp4.1LG03g15780 vs. TrEMBL
Match: A0A0A0L700_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118070 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 5.5e-32 Identity = 82/129 (63.57%), Postives = 84/129 (65.12%), Query Frame = 1
BLAST of Cp4.1LG03g15780 vs. TrEMBL
Match: F6GV86_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02030 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 3.0e-22 Identity = 63/125 (50.40%), Postives = 74/125 (59.20%), Query Frame = 1
BLAST of Cp4.1LG03g15780 vs. TrEMBL
Match: A0A0B0PN24_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_12557 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 2.6e-21 Identity = 62/129 (48.06%), Postives = 77/129 (59.69%), Query Frame = 1
BLAST of Cp4.1LG03g15780 vs. TrEMBL
Match: A0A0D2QYT2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G039500 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 3.3e-21 Identity = 62/129 (48.06%), Postives = 77/129 (59.69%), Query Frame = 1
BLAST of Cp4.1LG03g15780 vs. TrEMBL
Match: A0A061E2A0_THECC (StAR-related lipid transfer protein 9, putative OS=Theobroma cacao GN=TCM_005656 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 5.3e-19 Identity = 58/131 (44.27%), Postives = 74/131 (56.49%), Query Frame = 1
BLAST of Cp4.1LG03g15780 vs. TAIR10
Match: AT3G60480.1 (AT3G60480.1 unknown protein) HSP 1 Score: 75.1 bits (183), Expect = 3.5e-14 Identity = 39/81 (48.15%), Postives = 48/81 (59.26%), Query Frame = 1
BLAST of Cp4.1LG03g15780 vs. NCBI nr
Match: gi|659074821|ref|XP_008437814.1| (PREDICTED: uncharacterized protein LOC103483131 [Cucumis melo]) HSP 1 Score: 148.7 bits (374), Expect = 7.1e-33 Identity = 83/129 (64.34%), Postives = 86/129 (66.67%), Query Frame = 1
BLAST of Cp4.1LG03g15780 vs. NCBI nr
Match: gi|449431982|ref|XP_004133779.1| (PREDICTED: uncharacterized protein LOC101221895 [Cucumis sativus]) HSP 1 Score: 145.2 bits (365), Expect = 7.9e-32 Identity = 82/129 (63.57%), Postives = 84/129 (65.12%), Query Frame = 1
BLAST of Cp4.1LG03g15780 vs. NCBI nr
Match: gi|1009140453|ref|XP_015887660.1| (PREDICTED: uncharacterized protein LOC107422691 [Ziziphus jujuba]) HSP 1 Score: 115.9 bits (289), Expect = 5.1e-23 Identity = 65/127 (51.18%), Postives = 76/127 (59.84%), Query Frame = 1
BLAST of Cp4.1LG03g15780 vs. NCBI nr
Match: gi|225453438|ref|XP_002275512.1| (PREDICTED: uncharacterized protein LOC100266789 [Vitis vinifera]) HSP 1 Score: 112.8 bits (281), Expect = 4.3e-22 Identity = 63/125 (50.40%), Postives = 74/125 (59.20%), Query Frame = 1
BLAST of Cp4.1LG03g15780 vs. NCBI nr
Match: gi|728848410|gb|KHG27853.1| (hypothetical protein F383_12557 [Gossypium arboreum]) HSP 1 Score: 109.8 bits (273), Expect = 3.7e-21 Identity = 62/129 (48.06%), Postives = 77/129 (59.69%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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