CsaV3_3G007550 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCGACGGCGACTGAATTAGAGAGAAAGTCAGGCAAAAGCGGAGAAGAGAGATGGAGGAGAACGGAGGAAGCGACGCTGGTAGCAACGCCCATTGGTGGTGGGCTTTCGCCGGTGCAGCGCAGTTAGGTTGGGGTATCGCCTCTTTCCGGCGAGGATTTATCGGTGATTCCAGCAACATGCCCCTCAAGGCCTTCGCCGTCGCTTCGCTTTTCGTCGGCGCTGCCGCCTCGTCTACAATTGCTTCCCTCAAGGCCTCTGGCATCCACAAGGTTCACCTCACTGCTTTTCTACTGTGTATTTATCAGTCGCATTTTTTCTTCTTCCCTCCCCCTCATCCTGGATTAGGTTAGAGGTTAATTGGACGACTTTGATCAGTCTGGTTTTGTACTCGTATCGGACTTTGGTGAATTAACTGAACAGATTAGTTTTGATTCGTCAGTATGCCGTGAATTTAGCTAATTTCCAGGAGGAATGGGATTTTGAGTTTTTGGCAGCTTAGTTAGCTTAATTTGTTAATGTTTGATTCGAACTATCAACCTTGTTGAAGTGAACAGTGAAATTGATCAGGGGATGAAAAAATACTTCAGTGGGTGTCAGTTTCTTTGGTCGCATTAGATTATTTGTTGCTGATGCCTGATTTTAGTCATGCTGTTTATCTTGGGCAGTTTGTTCGCTTGGCTTGATGTTGTGCTTAAATTCGAGAATCTTCTTAGTTGAATTTAGGTGTTTTGATTTTGAGTGGTTGATTCATGCCTATTTTTCATGTCGTTTTTTTCTGTTGGTATTATCCGCTTCTTTAAATTTAGAGGTTTAGGGTGTGGGATAAAACTAAAAGTTCTAACTTTCATAAACCTCATTTCAAAACTACTCATAGAATATAATATTTTAGAATGTTGAACAGAAAGTGTAATGATGGAGTTAAGTCTAAAAGAATGACATTCAAGCACAAACCTTTTGTCCAAAATTCTAATGTTTTTTCTACTTCAAGATAATTTTGAAACCTTTATGGAGCATTTTTTAATAAAGGACAAAGTTCAAGAGTGTTTTTTTCAAATAAAATAAAATATAGTCTAAATTCTGGTACACTTGGAAACCGCATACAAGTTGAGGCTTTGCCTCCTTCAAGTGGCAATCCTTATGGTAAAGGTTTGATGCTTTGGGTGGGAATTTAACCTTTCATTGTCTTTCCGTAGAAAGCGGTGTTGAACTCAATTCTGAAGCCTTCTGTCAGTTCAATGCACAAGTAACAGATGCTTTTTTCGGTTAATAAGAATAACTGTAGAGTATCTGTTGTTTGTTTAGGAGTATGAATGGTTTATTTGTTTGTTTTTAATATCATAGCTTCACTGTAATTGGTATGTGATAGGCAGAGGTAATTTGAACATATTAAGAGCGATGCTTTTTCACATAGGTGAAAGCCTCCATGATCAACAAGGTGGTAGGTAGCATTCATGGTTATGAGAGGCTTGTGATATAGAAATAGGATATCGATGACACTGTTATGAACTTAGAAGAACTTTGACGACCAGAAATGGTTTTCCTTTTCCCTTGTTGTTCTAATGGGTGAACAAACGAAGCCATTGTTATCAGTTCTTACAAAATCATGGGTTGGCGAAACGATTTCAATGGATGCAGAATTTCTTAAGAAGTGTTTTGATCTGGACGAAAGAAAAGGAGAACACGTCTGAAAAAGAAATTTACTAGATCTAGAAATGGGTGATGAAGTGAATGGTACGATTACTAATGTTTGGTTTTGGGGTGTACTGGAACAGGTGGAAGACGTGATGGAAGTAGGGGCCAGAATCAGAAGTGGATTGGGGATTCGTTCAAGGGCACAAGATAAATGAATAAATGAATATGGCAGCCTTTGTTATTCTATTCTGTGGGTAACTGGGAACATCTTCACTTTCACTTTGAGGAGTGCATATTCTCACCCACATGAGTCAACTAAAGTCATTCCATAGCAGACTGAGCACTTTCTTCGATGGTGAAAGAGTCACGAAGGGTCAGATTCCATTTTTCTTTATCAACCCTTAATTTGGTACTTCCTCTTATAGAGAGGTCTCCTATAATTATTTTGCTGTGTAGCAATGATATCAGATAACTGATTAAGGGCTTAGAAAGTTCTTCTAAATTGCCCTTAATTTACTTTAGATGTCCAACCTTCCTAAAGCAGCGATTTCTTTCTTCATTTAAGTAAAATCCTCTGCCGATTTATCCATCTTTGTTATACTTTCTTTTCTTTCTTGGTCATGCAA ATGGAGGAGAACGGAGGAAGCGACGCTGGTAGCAACGCCCATTGGTGGTGGGCTTTCGCCGGTGCAGCGCAGTTAGGTTGGGGTATCGCCTCTTTCCGGCGAGGATTTATCGGTGATTCCAGCAACATGCCCCTCAAGGCCTTCGCCGTCGCTTCGCTTTTCGTCGGCGCTGCCGCCTCGTCTACAATTGCTTCCCTCAAGGCCTCTGGCATCCACAAGGTGGAAGACGTGATGGAAGTAGGGGCCAGAATCAGAAGTGGATTGGGGATTCGTTCAAGGGCACAAGATAAATGA ATGGAGGAGAACGGAGGAAGCGACGCTGGTAGCAACGCCCATTGGTGGTGGGCTTTCGCCGGTGCAGCGCAGTTAGGTTGGGGTATCGCCTCTTTCCGGCGAGGATTTATCGGTGATTCCAGCAACATGCCCCTCAAGGCCTTCGCCGTCGCTTCGCTTTTCGTCGGCGCTGCCGCCTCGTCTACAATTGCTTCCCTCAAGGCCTCTGGCATCCACAAGGTGGAAGACGTGATGGAAGTAGGGGCCAGAATCAGAAGTGGATTGGGGATTCGTTCAAGGGCACAAGATAAATGA MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAASSTIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK
BLAST of CsaV3_3G007550 vs. NCBI nr
Match: XP_004133779.1 (PREDICTED: uncharacterized protein LOC101221895 [Cucumis sativus] >KGN56372.1 hypothetical protein Csa_3G118070 [Cucumis sativus]) HSP 1 Score: 190.3 bits (482), Expect = 3.2e-45 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of CsaV3_3G007550 vs. NCBI nr
Match: XP_022974845.1 (uncharacterized protein LOC111473617 isoform X1 [Cucurbita maxima] >XP_022975308.1 uncharacterized protein LOC111474468 isoform X1 [Cucurbita maxima]) HSP 1 Score: 160.6 bits (405), Expect = 2.7e-36 Identity = 81/97 (83.51%), Postives = 86/97 (88.66%), Query Frame = 0
BLAST of CsaV3_3G007550 vs. NCBI nr
Match: XP_022941577.1 (uncharacterized protein LOC111446882 isoform X2 [Cucurbita moschata]) HSP 1 Score: 160.2 bits (404), Expect = 3.5e-36 Identity = 81/97 (83.51%), Postives = 85/97 (87.63%), Query Frame = 0
BLAST of CsaV3_3G007550 vs. NCBI nr
Match: XP_023540026.1 (uncharacterized protein LOC111800524 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 159.8 bits (403), Expect = 4.6e-36 Identity = 80/97 (82.47%), Postives = 85/97 (87.63%), Query Frame = 0
BLAST of CsaV3_3G007550 vs. NCBI nr
Match: XP_022145350.1 (uncharacterized protein LOC111014824 [Momordica charantia]) HSP 1 Score: 159.1 bits (401), Expect = 7.8e-36 Identity = 81/97 (83.51%), Postives = 87/97 (89.69%), Query Frame = 0
BLAST of CsaV3_3G007550 vs. TAIR10
Match: AT3G60480.1 (unknown protein) HSP 1 Score: 102.1 bits (253), Expect = 2.1e-22 Identity = 50/102 (49.02%), Postives = 70/102 (68.63%), Query Frame = 0
BLAST of CsaV3_3G007550 vs. TrEMBL
Match: tr|A0A0A0L700|A0A0A0L700_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118070 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 2.1e-45 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of CsaV3_3G007550 vs. TrEMBL
Match: tr|A0A1S3AUW2|A0A1S3AUW2_CUCME (uncharacterized protein LOC103483131 OS=Cucumis melo OX=3656 GN=LOC103483131 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.0e-31 Identity = 76/80 (95.00%), Postives = 77/80 (96.25%), Query Frame = 0
BLAST of CsaV3_3G007550 vs. TrEMBL
Match: tr|A0A2I4HDZ6|A0A2I4HDZ6_9ROSI (uncharacterized protein LOC109016350 OS=Juglans regia OX=51240 GN=LOC109016350 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 4.8e-26 Identity = 64/96 (66.67%), Postives = 77/96 (80.21%), Query Frame = 0
BLAST of CsaV3_3G007550 vs. TrEMBL
Match: tr|F6GV86|F6GV86_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g02030 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 6.3e-26 Identity = 63/93 (67.74%), Postives = 74/93 (79.57%), Query Frame = 0
BLAST of CsaV3_3G007550 vs. TrEMBL
Match: tr|A0A2P5YGW3|A0A2P5YGW3_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA05737 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 3.1e-25 Identity = 63/97 (64.95%), Postives = 78/97 (80.41%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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