CsaV3_3G007550 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G007550
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionStAR lipid transfer-like protein
Locationchr3 : 6680039 .. 6682296 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCGACGGCGACTGAATTAGAGAGAAAGTCAGGCAAAAGCGGAGAAGAGAGATGGAGGAGAACGGAGGAAGCGACGCTGGTAGCAACGCCCATTGGTGGTGGGCTTTCGCCGGTGCAGCGCAGTTAGGTTGGGGTATCGCCTCTTTCCGGCGAGGATTTATCGGTGATTCCAGCAACATGCCCCTCAAGGCCTTCGCCGTCGCTTCGCTTTTCGTCGGCGCTGCCGCCTCGTCTACAATTGCTTCCCTCAAGGCCTCTGGCATCCACAAGGTTCACCTCACTGCTTTTCTACTGTGTATTTATCAGTCGCATTTTTTCTTCTTCCCTCCCCCTCATCCTGGATTAGGTTAGAGGTTAATTGGACGACTTTGATCAGTCTGGTTTTGTACTCGTATCGGACTTTGGTGAATTAACTGAACAGATTAGTTTTGATTCGTCAGTATGCCGTGAATTTAGCTAATTTCCAGGAGGAATGGGATTTTGAGTTTTTGGCAGCTTAGTTAGCTTAATTTGTTAATGTTTGATTCGAACTATCAACCTTGTTGAAGTGAACAGTGAAATTGATCAGGGGATGAAAAAATACTTCAGTGGGTGTCAGTTTCTTTGGTCGCATTAGATTATTTGTTGCTGATGCCTGATTTTAGTCATGCTGTTTATCTTGGGCAGTTTGTTCGCTTGGCTTGATGTTGTGCTTAAATTCGAGAATCTTCTTAGTTGAATTTAGGTGTTTTGATTTTGAGTGGTTGATTCATGCCTATTTTTCATGTCGTTTTTTTCTGTTGGTATTATCCGCTTCTTTAAATTTAGAGGTTTAGGGTGTGGGATAAAACTAAAAGTTCTAACTTTCATAAACCTCATTTCAAAACTACTCATAGAATATAATATTTTAGAATGTTGAACAGAAAGTGTAATGATGGAGTTAAGTCTAAAAGAATGACATTCAAGCACAAACCTTTTGTCCAAAATTCTAATGTTTTTTCTACTTCAAGATAATTTTGAAACCTTTATGGAGCATTTTTTAATAAAGGACAAAGTTCAAGAGTGTTTTTTTCAAATAAAATAAAATATAGTCTAAATTCTGGTACACTTGGAAACCGCATACAAGTTGAGGCTTTGCCTCCTTCAAGTGGCAATCCTTATGGTAAAGGTTTGATGCTTTGGGTGGGAATTTAACCTTTCATTGTCTTTCCGTAGAAAGCGGTGTTGAACTCAATTCTGAAGCCTTCTGTCAGTTCAATGCACAAGTAACAGATGCTTTTTTCGGTTAATAAGAATAACTGTAGAGTATCTGTTGTTTGTTTAGGAGTATGAATGGTTTATTTGTTTGTTTTTAATATCATAGCTTCACTGTAATTGGTATGTGATAGGCAGAGGTAATTTGAACATATTAAGAGCGATGCTTTTTCACATAGGTGAAAGCCTCCATGATCAACAAGGTGGTAGGTAGCATTCATGGTTATGAGAGGCTTGTGATATAGAAATAGGATATCGATGACACTGTTATGAACTTAGAAGAACTTTGACGACCAGAAATGGTTTTCCTTTTCCCTTGTTGTTCTAATGGGTGAACAAACGAAGCCATTGTTATCAGTTCTTACAAAATCATGGGTTGGCGAAACGATTTCAATGGATGCAGAATTTCTTAAGAAGTGTTTTGATCTGGACGAAAGAAAAGGAGAACACGTCTGAAAAAGAAATTTACTAGATCTAGAAATGGGTGATGAAGTGAATGGTACGATTACTAATGTTTGGTTTTGGGGTGTACTGGAACAGGTGGAAGACGTGATGGAAGTAGGGGCCAGAATCAGAAGTGGATTGGGGATTCGTTCAAGGGCACAAGATAAATGAATAAATGAATATGGCAGCCTTTGTTATTCTATTCTGTGGGTAACTGGGAACATCTTCACTTTCACTTTGAGGAGTGCATATTCTCACCCACATGAGTCAACTAAAGTCATTCCATAGCAGACTGAGCACTTTCTTCGATGGTGAAAGAGTCACGAAGGGTCAGATTCCATTTTTCTTTATCAACCCTTAATTTGGTACTTCCTCTTATAGAGAGGTCTCCTATAATTATTTTGCTGTGTAGCAATGATATCAGATAACTGATTAAGGGCTTAGAAAGTTCTTCTAAATTGCCCTTAATTTACTTTAGATGTCCAACCTTCCTAAAGCAGCGATTTCTTTCTTCATTTAAGTAAAATCCTCTGCCGATTTATCCATCTTTGTTATACTTTCTTTTCTTTCTTGGTCATGCAA

mRNA sequence

ATGGAGGAGAACGGAGGAAGCGACGCTGGTAGCAACGCCCATTGGTGGTGGGCTTTCGCCGGTGCAGCGCAGTTAGGTTGGGGTATCGCCTCTTTCCGGCGAGGATTTATCGGTGATTCCAGCAACATGCCCCTCAAGGCCTTCGCCGTCGCTTCGCTTTTCGTCGGCGCTGCCGCCTCGTCTACAATTGCTTCCCTCAAGGCCTCTGGCATCCACAAGGTGGAAGACGTGATGGAAGTAGGGGCCAGAATCAGAAGTGGATTGGGGATTCGTTCAAGGGCACAAGATAAATGA

Coding sequence (CDS)

ATGGAGGAGAACGGAGGAAGCGACGCTGGTAGCAACGCCCATTGGTGGTGGGCTTTCGCCGGTGCAGCGCAGTTAGGTTGGGGTATCGCCTCTTTCCGGCGAGGATTTATCGGTGATTCCAGCAACATGCCCCTCAAGGCCTTCGCCGTCGCTTCGCTTTTCGTCGGCGCTGCCGCCTCGTCTACAATTGCTTCCCTCAAGGCCTCTGGCATCCACAAGGTGGAAGACGTGATGGAAGTAGGGGCCAGAATCAGAAGTGGATTGGGGATTCGTTCAAGGGCACAAGATAAATGA

Protein sequence

MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAASSTIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK
BLAST of CsaV3_3G007550 vs. NCBI nr
Match: XP_004133779.1 (PREDICTED: uncharacterized protein LOC101221895 [Cucumis sativus] >KGN56372.1 hypothetical protein Csa_3G118070 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 3.2e-45
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0

Query: 1  MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAAS 60
          MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAAS
Sbjct: 1  MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAAS 60

Query: 61 STIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 98
          STIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK
Sbjct: 61 STIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 97

BLAST of CsaV3_3G007550 vs. NCBI nr
Match: XP_022974845.1 (uncharacterized protein LOC111473617 isoform X1 [Cucurbita maxima] >XP_022975308.1 uncharacterized protein LOC111474468 isoform X1 [Cucurbita maxima])

HSP 1 Score: 160.6 bits (405), Expect = 2.7e-36
Identity = 81/97 (83.51%), Postives = 86/97 (88.66%), Query Frame = 0

Query: 1   MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAAS 60
           M ENGGSD GSNAHWWWA AGA QLGWGIASFRRG IGDSS MP KAFAVASLFVGAA+S
Sbjct: 28  MVENGGSDGGSNAHWWWALAGATQLGWGIASFRRGVIGDSSLMPFKAFAVASLFVGAASS 87

Query: 61  STIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 98
           S IASLKA+GIHKVEDVMEVGA IR+GLGIR R +D+
Sbjct: 88  SAIASLKAAGIHKVEDVMEVGANIRNGLGIRPRTRDE 124

BLAST of CsaV3_3G007550 vs. NCBI nr
Match: XP_022941577.1 (uncharacterized protein LOC111446882 isoform X2 [Cucurbita moschata])

HSP 1 Score: 160.2 bits (404), Expect = 3.5e-36
Identity = 81/97 (83.51%), Postives = 85/97 (87.63%), Query Frame = 0

Query: 1   MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAAS 60
           M ENGGSD GSNAHWWWA AGA Q GWGIASFRRG IGDSS MP KAFAVASLFVGAAAS
Sbjct: 28  MVENGGSDGGSNAHWWWALAGATQFGWGIASFRRGVIGDSSLMPFKAFAVASLFVGAAAS 87

Query: 61  STIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 98
           S IASLKA+GIHKVEDVMEVGA IR+GLGIR R +D+
Sbjct: 88  SAIASLKAAGIHKVEDVMEVGANIRTGLGIRPRTRDE 124

BLAST of CsaV3_3G007550 vs. NCBI nr
Match: XP_023540026.1 (uncharacterized protein LOC111800524 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.8 bits (403), Expect = 4.6e-36
Identity = 80/97 (82.47%), Postives = 85/97 (87.63%), Query Frame = 0

Query: 1   MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAAS 60
           M ENGGSD GSNAHWWWA AGA Q GWGIASFRRG IGDSS MP KAFAVASLFVGAAAS
Sbjct: 6   MVENGGSDGGSNAHWWWALAGATQFGWGIASFRRGVIGDSSLMPFKAFAVASLFVGAAAS 65

Query: 61  STIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 98
           S IASLKA+GIHKVEDVMEVGA IR+GLG+R R +D+
Sbjct: 66  SAIASLKAAGIHKVEDVMEVGANIRTGLGVRPRTRDE 102

BLAST of CsaV3_3G007550 vs. NCBI nr
Match: XP_022145350.1 (uncharacterized protein LOC111014824 [Momordica charantia])

HSP 1 Score: 159.1 bits (401), Expect = 7.8e-36
Identity = 81/97 (83.51%), Postives = 87/97 (89.69%), Query Frame = 0

Query: 1  MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAAS 60
          ME+NGG D GSNAHWWWA AGA Q GWGIASFRRGFIG+SS MP KAFAVASLFVGAAAS
Sbjct: 1  MEDNGG-DGGSNAHWWWALAGATQFGWGIASFRRGFIGNSSLMPFKAFAVASLFVGAAAS 60

Query: 61 STIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 98
          S IASLKASGIHKVEDVME+GA IRSGLG+R RA+D+
Sbjct: 61 SAIASLKASGIHKVEDVMEIGASIRSGLGVRPRARDE 96

BLAST of CsaV3_3G007550 vs. TAIR10
Match: AT3G60480.1 (unknown protein)

HSP 1 Score: 102.1 bits (253), Expect = 2.1e-22
Identity = 50/102 (49.02%), Postives = 70/102 (68.63%), Query Frame = 0

Query: 2   EENGGSDAGSNA------HWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFV 61
           E+N G+ AG ++      HWWWA    AQ+ WGI   RRG+ GD   MPLKAF VASLFV
Sbjct: 3   EQNAGTGAGESSLLDGSGHWWWALGSGAQIMWGIRLIRRGYAGDVRLMPLKAFGVASLFV 62

Query: 62  GAAASSTIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 98
           G+ A+S++A ++A+GIH V+D +++GA IR+ LG+  +  DK
Sbjct: 63  GSLATSSVALVRATGIHTVQDAIDLGANIRTNLGVTPQIPDK 104

BLAST of CsaV3_3G007550 vs. TrEMBL
Match: tr|A0A0A0L700|A0A0A0L700_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118070 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.1e-45
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0

Query: 1  MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAAS 60
          MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAAS
Sbjct: 1  MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAAS 60

Query: 61 STIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 98
          STIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK
Sbjct: 61 STIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 97

BLAST of CsaV3_3G007550 vs. TrEMBL
Match: tr|A0A1S3AUW2|A0A1S3AUW2_CUCME (uncharacterized protein LOC103483131 OS=Cucumis melo OX=3656 GN=LOC103483131 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.0e-31
Identity = 76/80 (95.00%), Postives = 77/80 (96.25%), Query Frame = 0

Query: 18  AFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAASSTIASLKASGIHKVEDV 77
           AFAGA QLGWGIASFRRGF+GDSS MPLKAFAVASLFVGAAASS IASLKASGIHKVEDV
Sbjct: 46  AFAGAGQLGWGIASFRRGFVGDSSTMPLKAFAVASLFVGAAASSAIASLKASGIHKVEDV 105

Query: 78  MEVGARIRSGLGIRSRAQDK 98
           MEVGARIRSGLGIRSRAQDK
Sbjct: 106 MEVGARIRSGLGIRSRAQDK 125

BLAST of CsaV3_3G007550 vs. TrEMBL
Match: tr|A0A2I4HDZ6|A0A2I4HDZ6_9ROSI (uncharacterized protein LOC109016350 OS=Juglans regia OX=51240 GN=LOC109016350 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.8e-26
Identity = 64/96 (66.67%), Postives = 77/96 (80.21%), Query Frame = 0

Query: 2  EENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAASS 61
          E+ GG   G   HWWWA A  AQLG G++S+RRG+ GDS  MPLKAF VASLFVGAAAS+
Sbjct: 5  EKEGGRTYG---HWWWALASGAQLGLGVSSYRRGYAGDSRLMPLKAFVVASLFVGAAAST 64

Query: 62 TIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 98
           ++ LKASGIHKVED+MEVGA IR+GLG+R RA+D+
Sbjct: 65 AVSVLKASGIHKVEDLMEVGANIRAGLGVRPRARDE 97

BLAST of CsaV3_3G007550 vs. TrEMBL
Match: tr|F6GV86|F6GV86_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g02030 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 6.3e-26
Identity = 63/93 (67.74%), Postives = 74/93 (79.57%), Query Frame = 0

Query: 1  MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAAS 60
          MEEN G  +G  +HWWWA A AAQLGWG+ S+RRG +GDSS MP+KAF VASLFVGAAAS
Sbjct: 1  MEEN-GHGSGDGSHWWWALASAAQLGWGVFSYRRGGVGDSSLMPVKAFGVASLFVGAAAS 60

Query: 61 STIASLKASGIHKVEDVMEVGARIRSGLGIRSR 94
          +    L ASGIHKVED+ E+GA IR+GLG+R R
Sbjct: 61 AAFGVLHASGIHKVEDLKEMGANIRTGLGVRPR 92

BLAST of CsaV3_3G007550 vs. TrEMBL
Match: tr|A0A2P5YGW3|A0A2P5YGW3_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA05737 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.1e-25
Identity = 63/97 (64.95%), Postives = 78/97 (80.41%), Query Frame = 0

Query: 3   ENGGSDA--GSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAAS 62
           ENGG +     N+HW+WA A A+QLGW ++S+R+G+ GD   MPLKAFAVASLF+GA+AS
Sbjct: 5   ENGGDNGKIHINSHWYWAIASASQLGWAVSSYRKGYTGDHRFMPLKAFAVASLFLGASAS 64

Query: 63  STIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 98
           +++A LKASGIHKVED+M VGA IRSGLGIR R  DK
Sbjct: 65  ASVAFLKASGIHKVEDLMGVGASIRSGLGIRPRTGDK 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004133779.13.2e-45100.00PREDICTED: uncharacterized protein LOC101221895 [Cucumis sativus] >KGN56372.1 hy... [more]
XP_022974845.12.7e-3683.51uncharacterized protein LOC111473617 isoform X1 [Cucurbita maxima] >XP_022975308... [more]
XP_022941577.13.5e-3683.51uncharacterized protein LOC111446882 isoform X2 [Cucurbita moschata][more]
XP_023540026.14.6e-3682.47uncharacterized protein LOC111800524 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022145350.17.8e-3683.51uncharacterized protein LOC111014824 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT3G60480.12.1e-2249.02unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0L700|A0A0A0L700_CUCSA2.1e-45100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118070 PE=4 SV=1[more]
tr|A0A1S3AUW2|A0A1S3AUW2_CUCME1.0e-3195.00uncharacterized protein LOC103483131 OS=Cucumis melo OX=3656 GN=LOC103483131 PE=... [more]
tr|A0A2I4HDZ6|A0A2I4HDZ6_9ROSI4.8e-2666.67uncharacterized protein LOC109016350 OS=Juglans regia OX=51240 GN=LOC109016350 P... [more]
tr|F6GV86|F6GV86_VITVI6.3e-2667.74Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g02030 PE=4 SV=... [more]
tr|A0A2P5YGW3|A0A2P5YGW3_GOSBA3.1e-2564.95Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA05737 PE=4 SV... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G007550.1CsaV3_3G007550.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37744FAMILY NOT NAMEDcoord: 1..96