Cla011684 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGCCAAAACGGATGAAGATGGGCATTACAGATAACCCAAAGAAGCTTGCCAACTTGATTGATCTTGTTAACCTTCCTTCAACTCTCAGGGAGTTTGTGGGACAGTCCCAAGTTTCTCGTCTGGGATGTTTCAAGTGTGTGTGGTCGTATATCAAAACCAACAATCTTCAGGTTCTTTTTTGTCTTATTTTTATGGGTTTTTTTGTTATCTGCTTTAGATACATATTGATTATGCCGCTATCGACCTGACAGAGACCTCCCTTGTTTAATCTACTTTCAAAATATTTGATGTAGATTCTACGTTTTATGCTGGTGAAAGTATAGATTAAAATGGGGAACAGGGTAGGAGAAGAAAGCCCATAAGTTTAAAGACCCAGGATGAAAAAGAATCTCCTTAAGTGAAAGTTATGAGAAACTGATGGAGGGTCAAGGTCCAAGACAAAATACAGTTAATAAAACCATGTCTTTTCAACGAAATCGTATAGACTGAGAATGAGGTTACAAAGAGAGTCTGATAAAGCCCAACCAGAACTTGGAGGATATTGAAACGTAAAAGATAAACAGCTACAAAATAATTCTAAGTATTCGAGGTACAAGTACCTCCCTGCCTCGAGTATACGCACTCAAGCCTACACCATCTCAACAATTCTCTACTTTCATCCTTTAGCACTCACCCTATTTATGACATCCCCCAACAGTATGCTCTAATAATGTTCCCAACTACTCCCGTCACATTCCTATCCAAGAAGAGATGCTATTGACATTTCTTCAACCATAGGGTCACGTAAGCTTGATTGGCTTACTTTCTTTTTTTTTGTAATATCTGTGAGTGTCCGAGTCAACTTATGTACATCTTGACAAATCTCACTAGATAATCCGCTTGATCCTACAACATTTGGAGGTCAAGAAAACTCGTAGGATATTAAATTTTAAGTAGATGACCACTATGGATTGAACTCATCTCCTCTAAGCCTTTATCAAACTCAATGTCCTTTATTTACTGCTAGGTCAACCATGATGGTTGATTGGCTTACTACTAATACCAACTAACATATATTTTTTCTTATTAAATAAGACCAGAAATTCCTTCAAAAATCTATAAAGTCCTATTATGACTCCCAAAGGCATCTCCTTATGCATAAGGGGAAATAGTATTATAACCCATAAATGAGTTACATGGATGATCTTTGTCCGTCCCAGCAAGCAACCCTTCTACTAAGCCTTTATCCATGCCTCTCAAAATAAGTCTGTTAAGCACATCCACAACCACCCCAAAAGAGAATGATGCTTGATTTTACTTGTAAATTCAATAGCTTTTGGTCTTTGCACTAGTTTGCGGTACACTTTATGACTGTTCCAATGCTATATGATATTATCTTCGGAAGCTGAAAGTACTCGAAACTTTAATGAAGGAGCATTTTTTTTCTTTTCCAAGTGTTATAAATATGTTTCTGCAAACCCATAAGTGGCTTTCTTTATTCTGATAAAAGGTTATGGATGTGTATATTTCTTGCTTAGGATCCGACGAACAAGAATGTGGTCATTTGTGATGATAAGTTAAAGAGTATATTGCTAGGTAAGCCGAAGGTTGAGCTAGCTGAACTTCCTGCACTGATTAAATTACATTTTCCCAAAAACCCCAAGTGA ATGCTGCCAAAACGGATGAAGATGGGCATTACAGATAACCCAAAGAAGCTTGCCAACTTGATTGATCTTGTTAACCTTCCTTCAACTCTCAGGGAGTTTGTGGGACAGTCCCAAGTTTCTCGTCTGGGATGTTTCAAGTGTGTGTGGTCGTATATCAAAACCAACAATCTTCAGGATCCGACGAACAAGAATGTGGTCATTTGTGATGATAAGTTAAAGAGTATATTGCTAGGTAAGCCGAAGGTTGAGCTAGCTGAACTTCCTGCACTGATTAAATTACATTTTCCCAAAAACCCCAAGTGA ATGCTGCCAAAACGGATGAAGATGGGCATTACAGATAACCCAAAGAAGCTTGCCAACTTGATTGATCTTGTTAACCTTCCTTCAACTCTCAGGGAGTTTGTGGGACAGTCCCAAGTTTCTCGTCTGGGATGTTTCAAGTGTGTGTGGTCGTATATCAAAACCAACAATCTTCAGGATCCGACGAACAAGAATGTGGTCATTTGTGATGATAAGTTAAAGAGTATATTGCTAGGTAAGCCGAAGGTTGAGCTAGCTGAACTTCCTGCACTGATTAAATTACATTTTCCCAAAAACCCCAAGTGA MLPKRMKMGITDNPKKLANLIDLVNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNVVICDDKLKSILLGKPKVELAELPALIKLHFPKNPK
BLAST of Cla011684 vs. Swiss-Prot
Match: UAF30_SCHPO (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spp27 PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.4e-07 Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 1
BLAST of Cla011684 vs. Swiss-Prot
Match: UAF30_YEAST (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UAF30 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.0e-06 Identity = 25/77 (32.47%), Postives = 45/77 (58.44%), Query Frame = 1
BLAST of Cla011684 vs. TrEMBL
Match: A0A0A0L2E1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G493210 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 4.0e-46 Identity = 93/100 (93.00%), Postives = 95/100 (95.00%), Query Frame = 1
BLAST of Cla011684 vs. TrEMBL
Match: A0A151SBL4_CAJCA (Upstream activation factor subunit UAF30 OS=Cajanus cajan GN=KK1_025905 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 9.8e-45 Identity = 88/100 (88.00%), Postives = 95/100 (95.00%), Query Frame = 1
BLAST of Cla011684 vs. TrEMBL
Match: A0A0B2NVJ3_GLYSO (Upstream activation factor subunit spp27 OS=Glycine soja GN=glysoja_006364 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 3.7e-44 Identity = 88/100 (88.00%), Postives = 94/100 (94.00%), Query Frame = 1
BLAST of Cla011684 vs. TrEMBL
Match: C6T3J2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G321900 PE=2 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 3.7e-44 Identity = 88/100 (88.00%), Postives = 94/100 (94.00%), Query Frame = 1
BLAST of Cla011684 vs. TrEMBL
Match: I1N0J4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G090500 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 1.4e-43 Identity = 88/100 (88.00%), Postives = 93/100 (93.00%), Query Frame = 1
BLAST of Cla011684 vs. NCBI nr
Match: gi|659096818|ref|XP_008449303.1| (PREDICTED: upstream activation factor subunit spp27 [Cucumis melo]) HSP 1 Score: 193.4 bits (490), Expect = 2.0e-46 Identity = 92/100 (92.00%), Postives = 97/100 (97.00%), Query Frame = 1
BLAST of Cla011684 vs. NCBI nr
Match: gi|778694879|ref|XP_011653889.1| (PREDICTED: upstream activation factor subunit spp27 [Cucumis sativus]) HSP 1 Score: 191.8 bits (486), Expect = 5.7e-46 Identity = 93/100 (93.00%), Postives = 95/100 (95.00%), Query Frame = 1
BLAST of Cla011684 vs. NCBI nr
Match: gi|700199619|gb|KGN54777.1| (hypothetical protein Csa_4G493210 [Cucumis sativus]) HSP 1 Score: 191.8 bits (486), Expect = 5.7e-46 Identity = 93/100 (93.00%), Postives = 95/100 (95.00%), Query Frame = 1
BLAST of Cla011684 vs. NCBI nr
Match: gi|1012340959|gb|KYP52168.1| (Upstream activation factor subunit UAF30 [Cajanus cajan]) HSP 1 Score: 187.2 bits (474), Expect = 1.4e-44 Identity = 88/100 (88.00%), Postives = 95/100 (95.00%), Query Frame = 1
BLAST of Cla011684 vs. NCBI nr
Match: gi|951056859|ref|XP_014521860.1| (PREDICTED: upstream activation factor subunit spp27 [Vigna radiata var. radiata]) HSP 1 Score: 185.7 bits (470), Expect = 4.1e-44 Identity = 87/100 (87.00%), Postives = 94/100 (94.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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