MELO3C032871.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C032871.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPhytosulfokines 3 family protein
Locationchr07 : 28669319 .. 28669980 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTAAAATCCATGCTTGTTACTTTTACCTTTCAACTTCCAATTTTGCCCTCCCAAACTCCCTTTATATTCATCCACAGTCCTTCCTCTTCCCAAGCTCTCTCTCTCTCTCTCTCATATGGCCTCCAAACTTTTCACCTCCATCTACCCTTTTCTCTTCCTCTTCCTCTTTTTTTCCTCCTCCTCAACCACCCCCGTAGCTGCTCGGCCGGTGCCCGGTTTTTCAAACGCTTTTCTCGATACTTCTCGAGATGGGGTATGAAATTTATCACCCAATTCCTCAGCTTGTTCATTCATTAATAATATATATATGTTTCTTAAAAGAATAGAAGTGTTTTTGTTTTTGAAGGTTGTGGATGATGTTTTGGAGGAGGAGAGTTGTGATGAAATTGGAGAAGATTATTGCTTGATGAGGAAAACTGTTGCAGCTCATGTTGATTATATCTACACAGATAGCCAGAAGCCATGAGATATTATTTAGTTTTCACTTTTGTCCCAATTGTACATTCTCACCAGTTTTTAATAAATAGATTTTGAGGGAAAATTAAAATGAAAAATGGTGACAAAAGACAAGACATTCTTTTGTATTTTTCTCTTCATTTTTGGAAAAATTGATAGTCATTAATTGCATCAACCTATATGGTACTTATATCTCTAATTATT

mRNA sequence

GATTAAAATCCATGCTTGTTACTTTTACCTTTCAACTTCCAATTTTGCCCTCCCAAACTCCCTTTATATTCATCCACAGTCCTTCCTCTTCCCAAGCTCTCTCTCTCTCTCTCTCATATGGCCTCCAAACTTTTCACCTCCATCTACCCTTTTCTCTTCCTCTTCCTCTTTTTTTCCTCCTCCTCAACCACCCCCGTAGCTGCTCGGCCGGTGCCCGGTTTTTCAAACGCTTTTCTCGATACTTCTCGAGATGGGGTTGTGGATGATGTTTTGGAGGAGGAGAGTTGTGATGAAATTGGAGAAGATTATTGCTTGATGAGGAAAACTGTTGCAGCTCATGTTGATTATATCTACACAGATAGCCAGAAGCCATGAGATATTATTTAGTTTTCACTTTTGTCCCAATTGTACATTCTCACCAGTTTTTAATAAATAGATTTTGAGGGAAAATTAAAATGAAAAATGGTGACAAAAGACAAGACATTCTTTTGTATTTTTCTCTTCATTTTTGGAAAAATTGATAGTCATTAATTGCATCAACCTATATGGTACTTATATCTCTAATTATT

Coding sequence (CDS)

ATGGCCTCCAAACTTTTCACCTCCATCTACCCTTTTCTCTTCCTCTTCCTCTTTTTTTCCTCCTCCTCAACCACCCCCGTAGCTGCTCGGCCGGTGCCCGGTTTTTCAAACGCTTTTCTCGATACTTCTCGAGATGGGGTTGTGGATGATGTTTTGGAGGAGGAGAGTTGTGATGAAATTGGAGAAGATTATTGCTTGATGAGGAAAACTGTTGCAGCTCATGTTGATTATATCTACACAGATAGCCAGAAGCCATGA

Protein sequence

MASKLFTSIYPFLFLFLFFSSSSTTPVAARPVPGFSNAFLDTSRDGVVDDVLEEESCDEIGEDYCLMRKTVAAHVDYIYTDSQKP
BLAST of MELO3C032871.2 vs. NCBI nr
Match: XP_004150263.1 (PREDICTED: phytosulfokines 3 [Cucumis sativus] >KGN52741.1 hypothetical protein Csa_4G000620 [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-29
Identity = 79/87 (90.80%), Postives = 83/87 (95.40%), Query Frame = 0

Query: 1  MASKLFTSIYPFLXXXXXXXXXXXTPVAARPVPGFSNAFLDTSRDGVV--DDVLEEESCD 60
          MASKLFTSIYPFLXXXXXXXXXX TP+AARPVPGFSNAFL TSRDGVV  DDVLEEESCD
Sbjct: 1  MASKLFTSIYPFLXXXXXXXXXXTTPIAARPVPGFSNAFLGTSRDGVVVEDDVLEEESCD 60

Query: 61 EIGEDYCLMRKTVAAHVDYIYTDSQKP 86
          EIGE+YCLMRKT+AAHVDYIYTD+QKP
Sbjct: 61 EIGEEYCLMRKTLAAHVDYIYTDTQKP 87

BLAST of MELO3C032871.2 vs. NCBI nr
Match: XP_022922962.1 (phytosulfokines-like [Cucurbita moschata])

HSP 1 Score: 103.6 bits (257), Expect = 3.4e-19
Identity = 57/88 (64.77%), Postives = 64/88 (72.73%), Query Frame = 0

Query: 1  MASKLFTSIYPFLXXXXXXXXXXXTPVAAR--PVPGFSNAFLDTSRDGVV--DDVLEEES 60
          MASKL TSI+ FL           T + AR  PVPGFSNAF  TSRDG+   DD LEEES
Sbjct: 1  MASKLLTSIFTFL-FLFFSFVSSATTIGARPVPVPGFSNAFPGTSRDGLKAGDDALEEES 60

Query: 61 CDEIGEDYCLMRKTVAAHVDYIYTDSQK 85
          C+EIGE+YCLMRKT+AAH DYIYTDSQ+
Sbjct: 61 CEEIGEEYCLMRKTLAAHADYIYTDSQR 87

BLAST of MELO3C032871.2 vs. NCBI nr
Match: XP_022984884.1 (phytosulfokines-like [Cucurbita maxima])

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-17
Identity = 55/88 (62.50%), Postives = 62/88 (70.45%), Query Frame = 0

Query: 1   MASKLFTSIYPFLXXXXXXXXXXXTPVAAR--PVPGFSNAFLDTSRDGVV--DDVLEEES 60
           MA KL TSI+ FL           T + AR  PVPGFSNAF  TSRD +   DD LEEES
Sbjct: 37  MAPKLLTSIFTFL-FLFFSFVSSVTTIGARPVPVPGFSNAFPGTSRDELKAGDDALEEES 96

Query: 61  CDEIGEDYCLMRKTVAAHVDYIYTDSQK 85
           C+EIGE+YCLMRKT+AAH DYIYTDSQ+
Sbjct: 97  CEEIGEEYCLMRKTLAAHADYIYTDSQR 123

BLAST of MELO3C032871.2 vs. NCBI nr
Match: XP_022149343.1 (phytosulfokines-like [Momordica charantia])

HSP 1 Score: 93.6 bits (231), Expect = 3.5e-16
Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 0

Query: 27 VAARPVPGFSNAFLDTSRDG--VVDDVLEEESCDEIGEDYCLMRKTVAAHVDYIYTDSQK 86
          VAARPVP F NAF  T+R G  VVDDVLEEESC  IGE+YCLMRKT+AAH+DYIYTD+Q+
Sbjct: 28 VAARPVPDFPNAFPATTRHGLKVVDDVLEEESCGGIGEEYCLMRKTLAAHLDYIYTDNQE 87

BLAST of MELO3C032871.2 vs. NCBI nr
Match: XP_022941982.1 (phytosulfokines-like [Cucurbita moschata])

HSP 1 Score: 89.4 bits (220), Expect = 6.6e-15
Identity = 60/87 (68.97%), Postives = 68/87 (78.16%), Query Frame = 0

Query: 1  MASKLFTSIYPFLXXXXXXXXXXXTPVAARPVPGFSNAFLDTSRDG--VVDDVLEEESCD 60
          MASKL TSI+   XXXXXXXXX  T V ARP+PG +N    T+RDG  VVDDVLEEESC 
Sbjct: 1  MASKLVTSIF-XXXXXXXXXXXSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESCG 60

Query: 61 EIGEDYCLMRKTVAAHVDYIYTDSQKP 86
           IGE++CLMRKT+AAH DYIYTD Q+P
Sbjct: 61 -IGEEHCLMRKTLAAHADYIYTDKQRP 85

BLAST of MELO3C032871.2 vs. TAIR10
Match: AT3G49780.1 (phytosulfokine 4 precursor)

HSP 1 Score: 52.4 bits (124), Expect = 1.6e-07
Identity = 26/59 (44.07%), Postives = 37/59 (62.71%), Query Frame = 0

Query: 28 AARPVPGFSNAF-LDTSRDGVVDDVLEEESCDEIGEDYCLMRKTVAAHVDYIYTDSQKP 86
          AAR  P  + A   + S   +  D +EEESC+ IGE+ CL+R+++  H DYIYT + KP
Sbjct: 21 AARLTPTTTTALSRENSVKEIEGDKVEEESCNGIGEEECLIRRSLVLHTDYIYTQNHKP 79

BLAST of MELO3C032871.2 vs. TAIR10
Match: AT4G37720.1 (phytosulfokine 6 precursor)

HSP 1 Score: 45.8 bits (107), Expect = 1.5e-05
Identity = 22/60 (36.67%), Postives = 37/60 (61.67%), Query Frame = 0

Query: 28 AARPVPGFSNAFLDTSRDGVVDDVLEE-------ESCDEIGEDYCLMRKTVAAHVDYIYT 81
          +ARP P +  +F  +  D +  +++E        ESCD+  ++ CL+R+T+ AH+DYIYT
Sbjct: 22 SARPEPAYFASFTTSPADTLSLEMIESKLHEVAGESCDKEDDEDCLVRRTLTAHLDYIYT 81

BLAST of MELO3C032871.2 vs. TAIR10
Match: AT2G22860.1 (phytosulfokine 2 precursor)

HSP 1 Score: 43.5 bits (101), Expect = 7.5e-05
Identity = 25/65 (38.46%), Postives = 37/65 (56.92%), Query Frame = 0

Query: 29 ARPVPGFSNAF--------LDTSRDGVVDDV-LEEESCDEIGEDYCLMRKTVAAHVDYIY 85
          ARP P  S +         ++   +G +DD+ + +E+C    ED CLMR+T+ AH DYIY
Sbjct: 22 ARPEPAISISITTAADPCNMEKKIEGKLDDMHMVDENCGADDED-CLMRRTLVAHTDYIY 81

BLAST of MELO3C032871.2 vs. Swiss-Prot
Match: sp|Q9M2Y0|PSK3_ARATH (Phytosulfokines 3 OS=Arabidopsis thaliana OX=3702 GN=PSK3 PE=2 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 2.9e-06
Identity = 26/59 (44.07%), Postives = 37/59 (62.71%), Query Frame = 0

Query: 28 AARPVPGFSNAF-LDTSRDGVVDDVLEEESCDEIGEDYCLMRKTVAAHVDYIYTDSQKP 86
          AAR  P  + A   + S   +  D +EEESC+ IGE+ CL+R+++  H DYIYT + KP
Sbjct: 21 AARLTPTTTTALSRENSVKEIEGDKVEEESCNGIGEEECLIRRSLVLHTDYIYTQNHKP 79

BLAST of MELO3C032871.2 vs. Swiss-Prot
Match: sp|Q9FS10|PSK_ASPOF (Phytosulfokines OS=Asparagus officinalis OX=4686 GN=PSK PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.8e-06
Identity = 24/58 (41.38%), Postives = 36/58 (62.07%), Query Frame = 0

Query: 28 AARPVPGFSNAFLDTSRDGVVDDVLEEESCDEIGEDYCLMRKTVAAHVDYIYTDSQKP 86
          AARP+    +    T    V+ + + +E+C+ +GE+ CLMR+T+ AHVDYIYT    P
Sbjct: 22 AARPLQPADS----TKSVHVIPEKVHDEACEGVGEEECLMRRTLTAHVDYIYTQDHNP 75

BLAST of MELO3C032871.2 vs. Swiss-Prot
Match: sp|Q9SZG4|PSK4_ARATH (Putative phytosulfokines 4 OS=Arabidopsis thaliana OX=3702 GN=PSK4 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.7e-04
Identity = 22/60 (36.67%), Postives = 37/60 (61.67%), Query Frame = 0

Query: 28 AARPVPGFSNAFLDTSRDGVVDDVLEE-------ESCDEIGEDYCLMRKTVAAHVDYIYT 81
          +ARP P +  +F  +  D +  +++E        ESCD+  ++ CL+R+T+ AH+DYIYT
Sbjct: 22 SARPEPAYFASFTTSPADTLSLEMIESKLHEVAGESCDKEDDEDCLVRRTLTAHLDYIYT 81

BLAST of MELO3C032871.2 vs. TrEMBL
Match: tr|A0A0A0KY18|A0A0A0KY18_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000620 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 8.2e-30
Identity = 79/87 (90.80%), Postives = 83/87 (95.40%), Query Frame = 0

Query: 1  MASKLFTSIYPFLXXXXXXXXXXXTPVAARPVPGFSNAFLDTSRDGVV--DDVLEEESCD 60
          MASKLFTSIYPFLXXXXXXXXXX TP+AARPVPGFSNAFL TSRDGVV  DDVLEEESCD
Sbjct: 1  MASKLFTSIYPFLXXXXXXXXXXTTPIAARPVPGFSNAFLGTSRDGVVVEDDVLEEESCD 60

Query: 61 EIGEDYCLMRKTVAAHVDYIYTDSQKP 86
          EIGE+YCLMRKT+AAHVDYIYTD+QKP
Sbjct: 61 EIGEEYCLMRKTLAAHVDYIYTDTQKP 87

BLAST of MELO3C032871.2 vs. TrEMBL
Match: tr|B9HFY9|B9HFY9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G006800v3 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.3e-08
Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 0

Query: 28 AARPVPGFSNAFLDTSRDGVVD---DVLEEESCDEIGEDYCLMRKTVAAHVDYIYTDSQK 86
          AARP PGF N  L  ++  VVD     + EESC+ +GE+ CLMR+T+AAH DYIYT   K
Sbjct: 24 AARPEPGFPNGSLAKNQQKVVDAEHAEVMEESCEGVGEEECLMRRTLAAHTDYIYTQKHK 83

BLAST of MELO3C032871.2 vs. TrEMBL
Match: tr|A0A2R6R5C1|A0A2R6R5C1_ACTCH (Phytosulfokine-beta like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc10254 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.0e-08
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 0

Query: 29 ARPVPGFSN-AFLDTSRDGVVDDVLEEESCDEIGEDYCLMRKTVAAHVDYIYTDSQKP 86
          ARP P   N   L T   GV  +V+ +ESC+ +G+D CLMR+T+AAHVDYIYT  QKP
Sbjct: 24 ARPEPRLPNDTPLKTQHGGVETEVVVDESCEGVGDDECLMRRTLAAHVDYIYTQKQKP 81

BLAST of MELO3C032871.2 vs. TrEMBL
Match: tr|A0A2N9J195|A0A2N9J195_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58142 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-07
Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 0

Query: 25 TPVAARPVPGFSNAF--LDTSR-DGVVDDVLEEESCDEIGEDYCLMRKTVAAHVDYIYTD 84
          T   ARP PGFS+A   L+T   D  ++ V+EEE+C+ +G++ CL R+T+AAH+DYIYT 
Sbjct: 21 TYATARPDPGFSDATTPLNTQHGDAELEKVMEEENCEGVGKEECLERRTLAAHLDYIYTQ 80

Query: 85 SQKP 86
            KP
Sbjct: 81 KHKP 84

BLAST of MELO3C032871.2 vs. TrEMBL
Match: tr|B9IBM1|B9IBM1_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G006900v3 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.0e-07
Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 0

Query: 28 AARPVPGFSNAFLDTSRDGVVD----DVLEEESCDEIGEDYCLMRKTVAAHVDYIYTDSQ 86
          AARP PGF    L  ++  VV+    +V+EE SC+ +GE+ CLMR+T+AAH DYIYT   
Sbjct: 24 AARPEPGFPGGSLAKNQHKVVEAEHAEVMEEISCEGLGEEECLMRRTLAAHTDYIYTQKN 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004150263.11.2e-2990.80PREDICTED: phytosulfokines 3 [Cucumis sativus] >KGN52741.1 hypothetical protein ... [more]
XP_022922962.13.4e-1964.77phytosulfokines-like [Cucurbita moschata][more]
XP_022984884.11.1e-1762.50phytosulfokines-like [Cucurbita maxima][more]
XP_022149343.13.5e-1675.41phytosulfokines-like [Momordica charantia][more]
XP_022941982.16.6e-1568.97phytosulfokines-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT3G49780.11.6e-0744.07phytosulfokine 4 precursor[more]
AT4G37720.11.5e-0536.67phytosulfokine 6 precursor[more]
AT2G22860.17.5e-0538.46phytosulfokine 2 precursor[more]
Match NameE-valueIdentityDescription
sp|Q9M2Y0|PSK3_ARATH2.9e-0644.07Phytosulfokines 3 OS=Arabidopsis thaliana OX=3702 GN=PSK3 PE=2 SV=2[more]
sp|Q9FS10|PSK_ASPOF3.8e-0641.38Phytosulfokines OS=Asparagus officinalis OX=4686 GN=PSK PE=1 SV=1[more]
sp|Q9SZG4|PSK4_ARATH2.7e-0436.67Putative phytosulfokines 4 OS=Arabidopsis thaliana OX=3702 GN=PSK4 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0KY18|A0A0A0KY18_CUCSA8.2e-3090.80Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000620 PE=4 SV=1[more]
tr|B9HFY9|B9HFY9_POPTR2.3e-0854.10Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G006800v3 PE=... [more]
tr|A0A2R6R5C1|A0A2R6R5C1_ACTCH4.0e-0855.17Phytosulfokine-beta like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY... [more]
tr|A0A2N9J195|A0A2N9J195_FAGSY1.1e-0750.00Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58142 PE=4 SV=1[more]
tr|B9IBM1|B9IBM1_POPTR2.0e-0750.00Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G006900v3 PE=... [more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0008083growth factor activity
Vocabulary: Biological Process
TermDefinition
GO:0008283cell proliferation
Vocabulary: INTERPRO
TermDefinition
IPR009438Phytosulfokine
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008283 cell proliferation
biological_process GO:0040007 growth
biological_process GO:0007165 signal transduction
biological_process GO:0008150 biological_process
cellular_component GO:0005576 extracellular region
cellular_component GO:0005575 cellular_component
molecular_function GO:0008083 growth factor activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032871.2.1MELO3C032871.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009438PhytosulfokinePFAMPF06404PSKcoord: 51..84
e-value: 1.1E-9
score: 39.0
IPR009438PhytosulfokinePANTHERPTHR33285FAMILY NOT NAMEDcoord: 13..85
NoneNo IPR availablePANTHERPTHR33285:SF12SUBFAMILY NOT NAMEDcoord: 13..85

The following gene(s) are paralogous to this gene:

None