MELO3C032871.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATTAAAATCCATGCTTGTTACTTTTACCTTTCAACTTCCAATTTTGCCCTCCCAAACTCCCTTTATATTCATCCACAGTCCTTCCTCTTCCCAAGCTCTCTCTCTCTCTCTCTCATATGGCCTCCAAACTTTTCACCTCCATCTACCCTTTTCTCTTCCTCTTCCTCTTTTTTTCCTCCTCCTCAACCACCCCCGTAGCTGCTCGGCCGGTGCCCGGTTTTTCAAACGCTTTTCTCGATACTTCTCGAGATGGGGTATGAAATTTATCACCCAATTCCTCAGCTTGTTCATTCATTAATAATATATATATGTTTCTTAAAAGAATAGAAGTGTTTTTGTTTTTGAAGGTTGTGGATGATGTTTTGGAGGAGGAGAGTTGTGATGAAATTGGAGAAGATTATTGCTTGATGAGGAAAACTGTTGCAGCTCATGTTGATTATATCTACACAGATAGCCAGAAGCCATGAGATATTATTTAGTTTTCACTTTTGTCCCAATTGTACATTCTCACCAGTTTTTAATAAATAGATTTTGAGGGAAAATTAAAATGAAAAATGGTGACAAAAGACAAGACATTCTTTTGTATTTTTCTCTTCATTTTTGGAAAAATTGATAGTCATTAATTGCATCAACCTATATGGTACTTATATCTCTAATTATT GATTAAAATCCATGCTTGTTACTTTTACCTTTCAACTTCCAATTTTGCCCTCCCAAACTCCCTTTATATTCATCCACAGTCCTTCCTCTTCCCAAGCTCTCTCTCTCTCTCTCTCATATGGCCTCCAAACTTTTCACCTCCATCTACCCTTTTCTCTTCCTCTTCCTCTTTTTTTCCTCCTCCTCAACCACCCCCGTAGCTGCTCGGCCGGTGCCCGGTTTTTCAAACGCTTTTCTCGATACTTCTCGAGATGGGGTTGTGGATGATGTTTTGGAGGAGGAGAGTTGTGATGAAATTGGAGAAGATTATTGCTTGATGAGGAAAACTGTTGCAGCTCATGTTGATTATATCTACACAGATAGCCAGAAGCCATGAGATATTATTTAGTTTTCACTTTTGTCCCAATTGTACATTCTCACCAGTTTTTAATAAATAGATTTTGAGGGAAAATTAAAATGAAAAATGGTGACAAAAGACAAGACATTCTTTTGTATTTTTCTCTTCATTTTTGGAAAAATTGATAGTCATTAATTGCATCAACCTATATGGTACTTATATCTCTAATTATT ATGGCCTCCAAACTTTTCACCTCCATCTACCCTTTTCTCTTCCTCTTCCTCTTTTTTTCCTCCTCCTCAACCACCCCCGTAGCTGCTCGGCCGGTGCCCGGTTTTTCAAACGCTTTTCTCGATACTTCTCGAGATGGGGTTGTGGATGATGTTTTGGAGGAGGAGAGTTGTGATGAAATTGGAGAAGATTATTGCTTGATGAGGAAAACTGTTGCAGCTCATGTTGATTATATCTACACAGATAGCCAGAAGCCATGA MASKLFTSIYPFLFLFLFFSSSSTTPVAARPVPGFSNAFLDTSRDGVVDDVLEEESCDEIGEDYCLMRKTVAAHVDYIYTDSQKP
BLAST of MELO3C032871.2 vs. NCBI nr
Match: XP_004150263.1 (PREDICTED: phytosulfokines 3 [Cucumis sativus] >KGN52741.1 hypothetical protein Csa_4G000620 [Cucumis sativus]) HSP 1 Score: 138.3 bits (347), Expect = 1.2e-29 Identity = 79/87 (90.80%), Postives = 83/87 (95.40%), Query Frame = 0
BLAST of MELO3C032871.2 vs. NCBI nr
Match: XP_022922962.1 (phytosulfokines-like [Cucurbita moschata]) HSP 1 Score: 103.6 bits (257), Expect = 3.4e-19 Identity = 57/88 (64.77%), Postives = 64/88 (72.73%), Query Frame = 0
BLAST of MELO3C032871.2 vs. NCBI nr
Match: XP_022984884.1 (phytosulfokines-like [Cucurbita maxima]) HSP 1 Score: 98.6 bits (244), Expect = 1.1e-17 Identity = 55/88 (62.50%), Postives = 62/88 (70.45%), Query Frame = 0
BLAST of MELO3C032871.2 vs. NCBI nr
Match: XP_022149343.1 (phytosulfokines-like [Momordica charantia]) HSP 1 Score: 93.6 bits (231), Expect = 3.5e-16 Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 0
BLAST of MELO3C032871.2 vs. NCBI nr
Match: XP_022941982.1 (phytosulfokines-like [Cucurbita moschata]) HSP 1 Score: 89.4 bits (220), Expect = 6.6e-15 Identity = 60/87 (68.97%), Postives = 68/87 (78.16%), Query Frame = 0
BLAST of MELO3C032871.2 vs. TAIR10
Match: AT3G49780.1 (phytosulfokine 4 precursor) HSP 1 Score: 52.4 bits (124), Expect = 1.6e-07 Identity = 26/59 (44.07%), Postives = 37/59 (62.71%), Query Frame = 0
BLAST of MELO3C032871.2 vs. TAIR10
Match: AT4G37720.1 (phytosulfokine 6 precursor) HSP 1 Score: 45.8 bits (107), Expect = 1.5e-05 Identity = 22/60 (36.67%), Postives = 37/60 (61.67%), Query Frame = 0
BLAST of MELO3C032871.2 vs. TAIR10
Match: AT2G22860.1 (phytosulfokine 2 precursor) HSP 1 Score: 43.5 bits (101), Expect = 7.5e-05 Identity = 25/65 (38.46%), Postives = 37/65 (56.92%), Query Frame = 0
BLAST of MELO3C032871.2 vs. Swiss-Prot
Match: sp|Q9M2Y0|PSK3_ARATH (Phytosulfokines 3 OS=Arabidopsis thaliana OX=3702 GN=PSK3 PE=2 SV=2) HSP 1 Score: 52.4 bits (124), Expect = 2.9e-06 Identity = 26/59 (44.07%), Postives = 37/59 (62.71%), Query Frame = 0
BLAST of MELO3C032871.2 vs. Swiss-Prot
Match: sp|Q9FS10|PSK_ASPOF (Phytosulfokines OS=Asparagus officinalis OX=4686 GN=PSK PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 3.8e-06 Identity = 24/58 (41.38%), Postives = 36/58 (62.07%), Query Frame = 0
BLAST of MELO3C032871.2 vs. Swiss-Prot
Match: sp|Q9SZG4|PSK4_ARATH (Putative phytosulfokines 4 OS=Arabidopsis thaliana OX=3702 GN=PSK4 PE=3 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 2.7e-04 Identity = 22/60 (36.67%), Postives = 37/60 (61.67%), Query Frame = 0
BLAST of MELO3C032871.2 vs. TrEMBL
Match: tr|A0A0A0KY18|A0A0A0KY18_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000620 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 8.2e-30 Identity = 79/87 (90.80%), Postives = 83/87 (95.40%), Query Frame = 0
BLAST of MELO3C032871.2 vs. TrEMBL
Match: tr|B9HFY9|B9HFY9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G006800v3 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.3e-08 Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of MELO3C032871.2 vs. TrEMBL
Match: tr|A0A2R6R5C1|A0A2R6R5C1_ACTCH (Phytosulfokine-beta like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc10254 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 4.0e-08 Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 0
BLAST of MELO3C032871.2 vs. TrEMBL
Match: tr|A0A2N9J195|A0A2N9J195_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58142 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.1e-07 Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 0
BLAST of MELO3C032871.2 vs. TrEMBL
Match: tr|B9IBM1|B9IBM1_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G006900v3 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.0e-07 Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |