MELO3C022803 (gene) Melon (DHL92) v3.5.1

NameMELO3C022803
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionZinc finger CCCH domain-containing 15
Locationchr9 : 12033577 .. 12036418 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAACTTGTTTTCTTTATTTTTATTTATATTCTCTCGAATTCCCATTCGAATAGAACAACGATTCGTATAGGTTTTCTCTCAAATCCAAGAATTTGATATACGGTCAACAAAATGGGGGATGAAGAAGCAGCTATGGAACAAGAGAAGCTCTCATGTAATAATCCAAGGACGGTTCCCATCACAGAGGCCCAATTCCTATCCTGGAAGCGCCAGAAGGTATTTTCCTTCTTCTTCTTCTTCATCAATCTCTCTCAGGCTCTAAATTTATTGTTTCTTTTAATTGCTGCTCTTTAATGTGTCAATTCTCTGCTTGAGTTTTTTAAGGTGCCAATCAATTGTATTTACCCCGAAAAGTTAGAGAATATAGGGTTGTGTTGAATCACTTTTGGGAATTTGCAAACCTCTAGGATTCATTCAATTTTGAGAGGTAATTAGGAATAAATTCCTCTGTTCTTCGCAGAATAATGGGTCTAAATTTTTTCTAAACTCAATTCGGCTTAACTTTTGGAAAGGGATTTAAGAGAAAAACAAATTTAGAATAAACAACCACACAGGCAACAAACTCGAACAAACTAAGATATCACATTGCTAGAAACAAACAAGGTACACCTCTAAACTTTATGTTCTAAAGGGTGCGCTAGTGTACTTTTGGTTGCGGCAAATATCTGAGGAGACAATTCTCAATTCACCATCATTACAAGCCTATGCCTCATCGATAAAAAAGAGACTTCTGAAATATCGACCACATCATCATTTTGGAGTTTAACAATCTCCAAACAGTGAGATTCAGCTTGGATATATTAATCGAGGAAAATGAATTGGGTGATGAGGAAGGAAAGGTTTGTAGACTACCGGAGATTGGTTTGACCTAGTGGTAAAAGTGGAAACAATCTCAATAACTCTAAATAACTAACTAAAAGGACGTGAGTTCAATCCATTTGTGAGACTAGTTAAGGTGTACATAAGCTTACTCGGACACTCACACAGATATCAGAAAAAGGATAAGAAAGGTTTGTATGTATGAAATAACAGAGATAGTCCTAGCCTTCTATGAGGGACTAGGATTATTTTGTTTTCTTTTCTTTTTTTGTATTTATTAAGAAACCAGCTTCAGGGCCCACAAAAAAAGGTAACACCTATTAACAGAGCAAAGTAGAAGAGAAGAAAAAAATAATAATAATAATAGAACCAGATTACAAGAGATTGCGTCTACGTTCTCAACTATTAAAAATAGAAAAATGAGGATAGTTACAGAGTACTCGAATACGCAGAAGGACATTGAAATTGGCTGCATTCTAAATCTCTTCCCATGATTCTTTTTGACTGCTTAAAGGTTCTCTTGTTTCTCTCAAGACATAAATTTCACAATGTAACAAAGAATCTCGCATCCCACCGCCAGATAATAAATATTTTTCTTACTGAAGGAGGAATTTACCGATACCTCCTCAATGCCCCTACAACTTCCGGGAGGAACAGAGACTCCAAACTTATTCAAGAAATTTCTCCATAGTGTCAAATATCAATCAATGCAAAGAGACAACTTCAAATCAGGTGAATAATTTCCTTTGTAGATCTTTTCCACACATCATATTCCACACGCCACTCTCAATGGGAAATATAACCATGGACGGAGATCTTTGAATGGAGTTACAATGTTTAACTTTCCCAAAGAAACTGAAGAAGCAAAGAACCTAATCTTTGGATTTTTCCAAATCATGATGAAGAAAGAGGAGACGGATTGGATTCAGACACCTAATGGGCAACAAGAGAATTCCTAGAGAACACTCCTGAAGGATCAAGAGTCCATTTGAAGTTTGAGATAGGCACATCCCTTGTAGCAGAAAGGAGATTGGCCAAATATGAGATTCATGATCATTAGTAGTCTTCCAAAATTAAAAGTCCTGATCTTTATGGAGGGTCGATGTAGAAGAAGAACTATAATTGAGAGGCTTAAGACAGAATTGACAAGCACCTCATTTCCAAGTGAAAATAAAGAGTTGCGTAAGAACTTGGGAAGAATTATTACCGTTCCTAAAGTCCACCGAGCATCAAACATGAGTTCCATTTTCCATGGAAATTGTAATAAAATTGTTAAAGAAGATTAGTGAAATTCTACTAGAAAATACTTACTATATGTAAGTGGCTATCTTTGAATTTGGTGGCTATTAACGTTCTAAATCACATGCTTCAACAATTGATAGACCACATGAACTGCAGGTTCATTTTTATTCGAGTTAGCTAACCACCAAAACGAACCTAAGCCATTCCACCAGTCTTTTAAGAGGGATTTGTGTCAGTAAAGTTGATGAGTAGTTGATGTTTGACATCCTATTACTAACCATCTTCTCTTATTTGCAGGATGCTGAGGCATCTGCTAAAAGAGATGAAACAGCAAGGAAACGTGCGGAAGATATTGCCTTAGGAGCGGTGCAAATGAATGGACGTGAGCTTTTCTTGCACCAACCATGGGTGTTTGATAATTCTCAATATTGAGGTTGGTGGTTTAAGATTGAGAAATTGTCGTGCTACTTTTTGTTCTCTGGAGAAATTGGCTTTGTACTTTAAAATGCTACCTTGCATTGTCATCGTTCATATGAATTAGTTCTTCCGCCCAAAATTTTCCTCTTATTGCTATGGTGGCCATACATGAATCTGTATAGGTTTCATCGCATGGTAAAAACTGTACAAAATGATGCATCCAATTTAAGTGCTGATTTGTTCTTTGCTGTTGACCTAAAATGTCTTTACAGGATGCATTTGTCTTGTACCGTCTATAACTCATGTAAATAAATGGCATGTTTTCTTTCTAAAGTATGTCCTACAGGGCATCCAAGTTAAGTT

mRNA sequence

CCAACTTGTTTTCTTTATTTTTATTTATATTCTCTCGAATTCCCATTCGAATAGAACAACGATTCGTATAGGTTTTCTCTCAAATCCAAGAATTTGATATACGGTCAACAAAATGGGGGATGAAGAAGCAGCTATGGAACAAGAGAAGCTCTCATGTAATAATCCAAGGACGGTTCCCATCACAGAGGCCCAATTCCTATCCTGGAAGCGCCAGAAGGATGCTGAGGCATCTGCTAAAAGAGATGAAACAGCAAGGAAACGTGCGGAAGATATTGCCTTAGGAGCGGTGCAAATGAATGGACGTGAGCTTTTCTTGCACCAACCATGGGTGTTTGATAATTCTCAATATTGAGGTTGGTGGTTTAAGATTGAGAAATTGTCGTGCTACTTTTTGTTCTCTGGAGAAATTGGCTTTGTACTTTAAAATGCTACCTTGCATTGTCATCGTTCATATGAATTAGTTCTTCCGCCCAAAATTTTCCTCTTATTGCTATGGTGGCCATACATGAATCTGTATAGGTTTCATCGCATGGTAAAAACTGTACAAAATGATGCATCCAATTTAAGTGCTGATTTGTTCTTTGCTGTTGACCTAAAATGTCTTTACAGGATGCATTTGTCTTGTACCGTCTATAACTCATGTAAATAAATGGCATGTTTTCTTTCTAAAGTATGTCCTACAGGGCATCCAAGTTAAGTT

Coding sequence (CDS)

ATGGGGGATGAAGAAGCAGCTATGGAACAAGAGAAGCTCTCATGTAATAATCCAAGGACGGTTCCCATCACAGAGGCCCAATTCCTATCCTGGAAGCGCCAGAAGGATGCTGAGGCATCTGCTAAAAGAGATGAAACAGCAAGGAAACGTGCGGAAGATATTGCCTTAGGAGCGGTGCAAATGAATGGACGTGAGCTTTTCTTGCACCAACCATGGGTGTTTGATAATTCTCAATATTGA

Protein sequence

MGDEEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQMNGRELFLHQPWVFDNSQY*
BLAST of MELO3C022803 vs. TrEMBL
Match: A0A0A0KN87_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G407070 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 9.0e-33
Identity = 74/80 (92.50%), Postives = 77/80 (96.25%), Query Frame = 1

Query: 1  MGDEEAAMEQEK-LSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAV 60
          MG EEAAMEQEK LS +NPRTVPITEAQFLSWKR+KDAEASAKR+ETARKRAEDIALGAV
Sbjct: 1  MGAEEAAMEQEKNLSSHNPRTVPITEAQFLSWKRRKDAEASAKREETARKRAEDIALGAV 60

Query: 61 QMNGRELFLHQPWVFDNSQY 80
          QMNGRELFLHQPWVFDNSQY
Sbjct: 61 QMNGRELFLHQPWVFDNSQY 80

BLAST of MELO3C022803 vs. TrEMBL
Match: A0A061FNI6_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_047076 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 8.4e-23
Identity = 54/73 (73.97%), Postives = 61/73 (83.56%), Query Frame = 1

Query: 7  AMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQMNGREL 66
          A E++K     PRT PITE+QFL+WK QKDA+ASAK+ E ARKRAEDIA G VQMNGREL
Sbjct: 3  AEEEQKQEKEQPRTNPITESQFLAWKGQKDADASAKKAEAARKRAEDIAAGTVQMNGREL 62

Query: 67 FLHQPWVFDNSQY 80
          FLH+PWVFDNSQY
Sbjct: 63 FLHEPWVFDNSQY 75

BLAST of MELO3C022803 vs. TrEMBL
Match: A0A0D2SMJ9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G044500 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.5e-22
Identity = 55/79 (69.62%), Postives = 61/79 (77.22%), Query Frame = 1

Query: 1  MGDEEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQ 60
          MG EE   +QE      P   PITE+QFL+WKRQKDA+ SAK+ E ARKRAEDIA G VQ
Sbjct: 1  MGAEEDQRKQEN---EQPTNNPITESQFLAWKRQKDADTSAKKAEAARKRAEDIAAGTVQ 60

Query: 61 MNGRELFLHQPWVFDNSQY 80
          MNGRELFLH+PWVFDNSQY
Sbjct: 61 MNGRELFLHEPWVFDNSQY 76

BLAST of MELO3C022803 vs. TrEMBL
Match: F6H0V1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g04880 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.2e-21
Identity = 52/77 (67.53%), Postives = 62/77 (80.52%), Query Frame = 1

Query: 3   DEEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQMN 62
           +EE   E EK   + P   P+++AQFLSWKRQKDA+ SA+RDE ARKR EDIA GAVQMN
Sbjct: 79  EEEKVQENEK---SRPTQNPMSQAQFLSWKRQKDADVSARRDEAARKRVEDIAAGAVQMN 138

Query: 63  GRELFLHQPWVFDNSQY 80
           GRELFLH+PWVFDN++Y
Sbjct: 139 GRELFLHEPWVFDNTRY 152

BLAST of MELO3C022803 vs. TrEMBL
Match: A0A0B0NU02_GOSAR (Zinc finger CCCH domain-containing 15 OS=Gossypium arboreum GN=F383_21880 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.1e-21
Identity = 53/74 (71.62%), Postives = 57/74 (77.03%), Query Frame = 1

Query: 6  AAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQMNGRE 65
          A  EQ K     P   PIT +QFL+WKRQKDAE SAK+ E ARKRAEDIA G VQMNGRE
Sbjct: 3  AEEEQRKQENEQPTNNPITVSQFLAWKRQKDAETSAKKAEAARKRAEDIAAGTVQMNGRE 62

Query: 66 LFLHQPWVFDNSQY 80
          LFLH+PWVFDNSQY
Sbjct: 63 LFLHEPWVFDNSQY 76

BLAST of MELO3C022803 vs. TAIR10
Match: AT1G22140.1 (AT1G22140.1 unknown protein)

HSP 1 Score: 87.4 bits (215), Expect = 4.3e-18
Identity = 40/62 (64.52%), Postives = 47/62 (75.81%), Query Frame = 1

Query: 18 PRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQMNGRELFLHQPWVFDNS 77
          P  + I++ QFL+WKRQKDAE  AK+ E ARKR EDIA G V MNGRELFLH+PWVFD++
Sbjct: 11 PTQISISKDQFLAWKRQKDAELLAKQAEAARKRQEDIASGRVPMNGRELFLHEPWVFDDT 70

Query: 78 QY 80
           +
Sbjct: 71 HH 72

BLAST of MELO3C022803 vs. NCBI nr
Match: gi|659121074|ref|XP_008460489.1| (PREDICTED: uncharacterized protein LOC103499290 isoform X2 [Cucumis melo])

HSP 1 Score: 163.7 bits (413), Expect = 1.3e-37
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1

Query: 1  MGDEEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQ 60
          MGDEEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQ
Sbjct: 1  MGDEEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQ 60

Query: 61 MNGRELFLHQPWVFDNSQY 80
          MNGRELFLHQPWVFDNSQY
Sbjct: 61 MNGRELFLHQPWVFDNSQY 79

BLAST of MELO3C022803 vs. NCBI nr
Match: gi|449445110|ref|XP_004140316.1| (PREDICTED: zinc finger CCCH domain-containing protein 15 homolog [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 1.3e-32
Identity = 74/80 (92.50%), Postives = 77/80 (96.25%), Query Frame = 1

Query: 1  MGDEEAAMEQEK-LSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAV 60
          MG EEAAMEQEK LS +NPRTVPITEAQFLSWKR+KDAEASAKR+ETARKRAEDIALGAV
Sbjct: 1  MGAEEAAMEQEKNLSSHNPRTVPITEAQFLSWKRRKDAEASAKREETARKRAEDIALGAV 60

Query: 61 QMNGRELFLHQPWVFDNSQY 80
          QMNGRELFLHQPWVFDNSQY
Sbjct: 61 QMNGRELFLHQPWVFDNSQY 80

BLAST of MELO3C022803 vs. NCBI nr
Match: gi|590598327|ref|XP_007018863.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-22
Identity = 54/73 (73.97%), Postives = 61/73 (83.56%), Query Frame = 1

Query: 7  AMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQMNGREL 66
          A E++K     PRT PITE+QFL+WK QKDA+ASAK+ E ARKRAEDIA G VQMNGREL
Sbjct: 3  AEEEQKQEKEQPRTNPITESQFLAWKGQKDADASAKKAEAARKRAEDIAAGTVQMNGREL 62

Query: 67 FLHQPWVFDNSQY 80
          FLH+PWVFDNSQY
Sbjct: 63 FLHEPWVFDNSQY 75

BLAST of MELO3C022803 vs. NCBI nr
Match: gi|823238864|ref|XP_012452086.1| (PREDICTED: zinc finger CCCH domain-containing protein 15 homolog [Gossypium raimondii])

HSP 1 Score: 111.3 bits (277), Expect = 7.8e-22
Identity = 55/79 (69.62%), Postives = 61/79 (77.22%), Query Frame = 1

Query: 1  MGDEEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQ 60
          MG EE   +QE      P   PITE+QFL+WKRQKDA+ SAK+ E ARKRAEDIA G VQ
Sbjct: 1  MGAEEDQRKQEN---EQPTNNPITESQFLAWKRQKDADTSAKKAEAARKRAEDIAAGTVQ 60

Query: 61 MNGRELFLHQPWVFDNSQY 80
          MNGRELFLH+PWVFDNSQY
Sbjct: 61 MNGRELFLHEPWVFDNSQY 76

BLAST of MELO3C022803 vs. NCBI nr
Match: gi|731428313|ref|XP_010664299.1| (PREDICTED: uncharacterized protein LOC100247155 [Vitis vinifera])

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-21
Identity = 52/77 (67.53%), Postives = 62/77 (80.52%), Query Frame = 1

Query: 3   DEEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQMN 62
           +EE   E EK   + P   P+++AQFLSWKRQKDA+ SA+RDE ARKR EDIA GAVQMN
Sbjct: 81  EEEKVQENEK---SRPTQNPMSQAQFLSWKRQKDADVSARRDEAARKRVEDIAAGAVQMN 140

Query: 63  GRELFLHQPWVFDNSQY 80
           GRELFLH+PWVFDN++Y
Sbjct: 141 GRELFLHEPWVFDNTRY 154

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KN87_CUCSA9.0e-3392.50Uncharacterized protein OS=Cucumis sativus GN=Csa_5G407070 PE=4 SV=1[more]
A0A061FNI6_THECC8.4e-2373.97Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_047076 PE=4 SV=1[more]
A0A0D2SMJ9_GOSRA5.5e-2269.62Uncharacterized protein OS=Gossypium raimondii GN=B456_010G044500 PE=4 SV=1[more]
F6H0V1_VITVI1.2e-2167.53Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g04880 PE=4 SV=... [more]
A0A0B0NU02_GOSAR2.1e-2171.62Zinc finger CCCH domain-containing 15 OS=Gossypium arboreum GN=F383_21880 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT1G22140.14.3e-1864.52 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659121074|ref|XP_008460489.1|1.3e-37100.00PREDICTED: uncharacterized protein LOC103499290 isoform X2 [Cucumis melo][more]
gi|449445110|ref|XP_004140316.1|1.3e-3292.50PREDICTED: zinc finger CCCH domain-containing protein 15 homolog [Cucumis sativu... [more]
gi|590598327|ref|XP_007018863.1|1.2e-2273.97Uncharacterized protein isoform 1 [Theobroma cacao][more]
gi|823238864|ref|XP_012452086.1|7.8e-2269.62PREDICTED: zinc finger CCCH domain-containing protein 15 homolog [Gossypium raim... [more]
gi|731428313|ref|XP_010664299.1|1.7e-2167.53PREDICTED: uncharacterized protein LOC100247155 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU45888melon EST collection version 4.0transcribed_cluster
MU58532melon EST collection version 4.0transcribed_cluster
MU60936melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022803T1MELO3C022803T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU45888MU45888transcribed_cluster
MU60936MU60936transcribed_cluster
MU58532MU58532transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12681ZINC FINGER-CONTAINING PROTEIN P48ZNFcoord: 17..79
score: 5.6