CSPI05G14620 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATTTTCTAATTTTTTTTGAAATAAATAAACCTAAATTGCCTTTGGATTCTTTTTTCAACTTGTTTTCGCTATTTTTTATCTATACTCTCTCGAATTCCCATTCGAATAGAACAACGATTTGTATAGGTTTTCTCTCAAATTCAAGAATTTGATATACGGTCAACAAAATGGGGGCAGAAGAAGCAGCTATGGAACAAGAGAAGAATCTCTCATCTCATAATCCAAGGACGGTTCCCATCACAGAGGCTCAATTCCTATCCTGGAAGCGCCGGAAGGTATTTTCCCTTCTTCTTCTTGTTCTTCATCAATCTCTCTCAGGCTCTAAATTTATTGTTTCTTTTGATTGCTGCTCTTTAATGTGTCATTACTCCGCTTGAGTTCTTTAAGGTGCCGATCAATCGTATTTCCATGCCATAACCTGAAAAATTAGAGAATTTAGGGTTGCGTTGAATCACTTTTGGGAATTTGGAAACCTCTAGGATTCATTCAATTTTGAGAGGTAATTAGGAATAAATTCCTCTGTTCTTTGCAGAATAATGGGTCTAAATTTTGTCTAAACTCAATTCGGCTTAAGTTTTGGAAAGGAGAAAAACAAATTTAGAATAAACAACCAAACAGGCAACAAACTCGAAGAAACTACGATATCACATTACTAGACACAAACAAGGTACACCTCCAAACTTTATGCACTTAAAGGGTGCGCTAGTGTATTTTTGGTTGTGGCAAATATCTGATGAGAAAGAGATAATTCTCAATTCACCATCATTACAAGCTTATGCCTTATCAATAAAAAAGAGACTTCTGAAATGTCGACCACATCATCATTTTGGAGCTTAACAATCTCAAAACAGTGAGATTCAGCTAGGATATATTAGGTGAGGAAAAGGAATTAGGCGATGAGAAACTATCGTGTGGGTTGGTTTGACCTAGTGGTAAAAATGGAAATAGTCTCAATAACTCTCAATAACTAACTAAAAGGACATGAGTTCGATCCATGATAGTCACCTACTTAAATTAATTTCTTATGAATTTTGTTGACACCCAAATGTTGTAGGGTAAGGTGAATTGTCGGTGAGATTACTCGAACTGCATGTGAGCTGACTCAGACACTTACAAATATCAGAAAAAGAAAAGAAATGTTTTAATGTATAAAATTACAGAGATAATCCTAGCCTTCTGTCCTTCTGTGAGGGACTAGGATTATTTTGTTTTGTTTTCATTTATTTTTATTAAGAAACCAGCTTTAGGGCCCATAAAAAAAGATAACAACTATTAACGGAGCAAAGTAGAAGTGAAGAAAAAATTTATAATAGAACAAGATTACTAGAGATTGGGTCTACAGTCTCAACTATTAAGAATAAAAAAATGAGGATAGTTATATTGAAATTTGCTGCATTCTAAATCTCTTCCCAAGATTCTTTTTGACTGCTGAAAGGTTCTCTTGATTCTCTCAAGCCATAAATTTCACAATGTAATGAAGAATCTCGCATCCCACGGCCAGATAATAGATATTTTTCGTACTGAAAGGAGGAATTTACCAATACCCCTACAACATCTGGGAGGAACAGTGACTCCAAACTTATTCAAGAAATTTCTCCATAGTGTCAAATATCAATCAATGCAAAGCAGCAACTTCAAATCAGATGAATAATTTCCTCTGTAGATCTTTTTCACACATCATATCCCACACGCCACTCTCAGTGGGACATAAAACCATGGATGTAGATCTTTGAATGAAGTTACAATGTTTAACCTTCCCAAAGAAACCGATAAAGCAAAGAACCTAACCTTTGGATTTTTCCAAATTATGGTGAAGAAAGAGGAGACAAGGATTGGATTCAGACACCTAATGGGCAACAAGAGAATTCCTAGAGAACACTCTGTTAGATATCTGGATTTAGATAGGGCTAAGGGTAGTTAGTTATATAGGCAGTTAGATGGTTATAAATAGAAAGTTGGGGAGGGAAGAAAGGCACGAAGAATTTGGTGAAGATAATGGACTGCAACATTCCTTGAAAGGAAGGAAGGGTAGAGGGTTAGGGTTCTTTTACTTGTTTGTTCTTTTATATTGTAATTTATGTTTGAGATATCAATAAAATGGAAACACTATATCACCGTTTTATCACACTCCTGAAGGATCAAGAGTCCATTTGAAGTTTGACATAGGCACATCCCTTGTAGCAGAAAGGAGATTGGCCTAATATGAGATTCATGATCATTAGTAGTCTTCCAAAATGAAAAGTCATGATCTAGGATGGTCGATGTAGAAGAACTATAATTGAGAGGATTAAGACAGAACTGACAAGCACCTCATTTCCAAGTCAAAATAAAGAGTTAGTTAAGAATAACTTGGGAAGAACTATTAGCGTTCCTAAAGTCCACCGAGAATCAAACATGAGTTCCATTTTCCATGGAAATTTTAATGAAATTGTTAAAGAAGATCAGTGAAATTCTACTAGAAAATACATACTATATGTAAGTGGCTATCTTTGAATTTGGTGGCTATTAACGTTCTAAATCACATGTTTCAACAATTGATAGACCACATGAACTGCAGGTTCATTTTTGTTCGAGTTAACTAACCACTAAAACAAACCTAAGCCATTCCACCAGTCTTTTAAGAGTGATTTGTGTCAGTAGAGTTAATGAGTAGTTGATGTTTGACATCCTATTCCTAACCATTTTCTCTTATTTGCAGGATGCTGAGGCATCTGCTAAAAGAGAGGAAACAGCAAGGAAACGTGCGGAAGATATTGCCTTAGGAGCGGTGCAAATGAATGGGCGAGAGCTTTTCTTGCACCAACCATGGGTGTTTGATAATTCTCAATATTGAGGTTGGTGTGGTTTAAGATTGAAAAATTGTAGTGCTACTTTTTGTTCTCTAGAGAAATTGGCTTTGTACTTTAAAATGCTACCTTGCATTGTCATCGTTCATATAAATTAGTTCATCCGTTCAAAATCATCTTCTCATTGCTATGGTAATACACGAGTCTATTTAGGTTTCATGGCATGGTAAAAACTGTACAAAATGATGAATCCAATTTAAGTGCTGATTTGTTCTTTGCTGTTGACCTAAAATGTCTTACAGGATTCATTTGTGTTGTACCGTCTATAACCCTCATGTAAACAAAATGGTATGTTTTCTTTCTAAAGTAGGTCCTACAGGGCATCAAAATCAAGTTGTATCCATGGTTTTAGCAGCTACGATATTTATCGCCATGTAAATTCAGTCCCCAATCCCAAATTATCTTATGAAGTTATGATGCATGGTTAATGGAATCAAATATTAAGAGACCTCTGTGGATTGGTGCCACTGACTCTAAGGTCCTTGCAAAGAATAAAGGACTTGGAGGAAATTGACAAAAATTAAATTGTAGTGGCCATCAATCTATTGTTGGGATTGCGTTTGTAAATTGAAACAAACTATTCAATAATTTAGGTGTTATTTATTTTCTAATAAATAAAGTGTTATTATTT ATGGGGGCAGAAGAAGCAGCTATGGAACAAGAGAAGAATCTCTCATCTCATAATCCAAGGACGGTTCCCATCACAGAGGCTCAATTCCTATCCTGGAAGCGCCGGAAGGATGCTGAGGCATCTGCTAAAAGAGAGGAAACAGCAAGGAAACGTGCGGAAGATATTGCCTTAGGAGCGGTGCAAATGAATGGGCGAGAGCTTTTCTTGCACCAACCATGGGTGTTTGATAATTCTCAATATTGA ATGGGGGCAGAAGAAGCAGCTATGGAACAAGAGAAGAATCTCTCATCTCATAATCCAAGGACGGTTCCCATCACAGAGGCTCAATTCCTATCCTGGAAGCGCCGGAAGGATGCTGAGGCATCTGCTAAAAGAGAGGAAACAGCAAGGAAACGTGCGGAAGATATTGCCTTAGGAGCGGTGCAAATGAATGGGCGAGAGCTTTTCTTGCACCAACCATGGGTGTTTGATAATTCTCAATATTGA
BLAST of CSPI05G14620 vs. TrEMBL
Match: A0A0A0KN87_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G407070 PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 6.1e-37 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1
BLAST of CSPI05G14620 vs. TrEMBL
Match: A0A061FNI6_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_047076 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 7.2e-22 Identity = 58/80 (72.50%), Postives = 65/80 (81.25%), Query Frame = 1
BLAST of CSPI05G14620 vs. TrEMBL
Match: A0A0D2SMJ9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G044500 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.2e-21 Identity = 55/80 (68.75%), Postives = 64/80 (80.00%), Query Frame = 1
BLAST of CSPI05G14620 vs. TrEMBL
Match: A0A059BKG9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F00482 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 8.0e-21 Identity = 56/80 (70.00%), Postives = 65/80 (81.25%), Query Frame = 1
BLAST of CSPI05G14620 vs. TrEMBL
Match: A0A067K9E1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11994 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.0e-20 Identity = 53/80 (66.25%), Postives = 64/80 (80.00%), Query Frame = 1
BLAST of CSPI05G14620 vs. TAIR10
Match: AT1G22140.1 (AT1G22140.1 unknown protein) HSP 1 Score: 84.7 bits (208), Expect = 2.8e-17 Identity = 40/68 (58.82%), Postives = 51/68 (75.00%), Query Frame = 1
BLAST of CSPI05G14620 vs. NCBI nr
Match: gi|449445110|ref|XP_004140316.1| (PREDICTED: zinc finger CCCH domain-containing protein 15 homolog [Cucumis sativus]) HSP 1 Score: 161.0 bits (406), Expect = 8.7e-37 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1
BLAST of CSPI05G14620 vs. NCBI nr
Match: gi|659121074|ref|XP_008460489.1| (PREDICTED: uncharacterized protein LOC103499290 isoform X2 [Cucumis melo]) HSP 1 Score: 144.4 bits (363), Expect = 8.5e-32 Identity = 74/80 (92.50%), Postives = 77/80 (96.25%), Query Frame = 1
BLAST of CSPI05G14620 vs. NCBI nr
Match: gi|590598327|ref|XP_007018863.1| (Uncharacterized protein isoform 1 [Theobroma cacao]) HSP 1 Score: 110.9 bits (276), Expect = 1.0e-21 Identity = 58/80 (72.50%), Postives = 65/80 (81.25%), Query Frame = 1
BLAST of CSPI05G14620 vs. NCBI nr
Match: gi|823238864|ref|XP_012452086.1| (PREDICTED: zinc finger CCCH domain-containing protein 15 homolog [Gossypium raimondii]) HSP 1 Score: 110.2 bits (274), Expect = 1.8e-21 Identity = 55/80 (68.75%), Postives = 64/80 (80.00%), Query Frame = 1
BLAST of CSPI05G14620 vs. NCBI nr
Match: gi|702362441|ref|XP_010060153.1| (PREDICTED: zinc finger CCCH domain-containing protein 15 homolog [Eucalyptus grandis]) HSP 1 Score: 107.5 bits (267), Expect = 1.1e-20 Identity = 56/80 (70.00%), Postives = 65/80 (81.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |