Bhi12G001100 (gene) Wax gourd

NameBhi12G001100
Typegene
OrganismBenincasa hispida (Wax gourd)
Descriptionzinc finger CCCH domain-containing protein 15 homolog
Locationchr12 : 38797295 .. 38800112 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTTCTCATCTTTATTCGAATAAAACAGAGGCTGCGGCAATTCGTAGAGGTTGTTTATCAAATCCAAGAAATTGATATACAGTAAACAGAATGGGGGCAGAAGGAGCAACGGAACAAGAGAAGTGCGCATCTCATAATCCAAGGACGGTTCCGATCACGGAAGCTCAGTTCCTATCCTGGAAGCGGCAGAAGGTACTTCCCTTCTTCTTCATCAATCTCTCTTAGGTTTCGATTAGGGTTTCTTTTGATCGCTGCTCTTTGATGTGCCATTGCTTTGCTTGAGTTCTTTAAGGTGCCAATTAATTGTATTTCCGTGCCATAGCCTGTAAAATTAGAGAATTTAGGGTTTCGTGGAACGACTTTTGGGGATTTGAAAACCTCTAGGATTCATTCAATTTAGAGAGGTACCTAGGAATTGTTTTCTCTGTTGTTTGTAGAAAGGGTCTCAATTTTTCTCAATTTTGCTTACACCCAATTCGGCTTAAGTTTTGGAAAAGCTTTTTTATTATTTATTTATTTATTTATTTTATTTTTTGGAGAATAAACAACTTAACGGGCAACAAACCTGAACGTACGAGATTACATCACTAAGACACGAACAACTTAAGAACCTAATTTTCCGCTCGGAGTTTGAAGAATGAAAAAGGAGTTTGTAGAATGGAAGATTCTTGCTCCTCAAAAGCTTTATGGGCACTAGAGCGACATTGCATTTTGGTTGCTGCAAACATGAGAAAACGAGACAATTCTCATTTCACTATCTAGAGCCTTTGCCTCATCAATAAAGAAAGGGACTTCATAAATGTCGACCGCTTCATCATTCAACAACTTAAGGACCTCCAGACTATCAGATTCAATTAGAATATTCGATGGATTAATTGAGGAAAAGGAATTGGGTAATGAGAAAGGAAAGGTTTGTCTGTATAAATATAAAATTACTCAGATAGTCCTAGAGTCCTGGCCTTCTATGAGGGACTAGGATTATTTTGTTTTGTTTCCTAAATAAGAAACCAGCTTTATGGCCTACAAAAAAAGTTGCTTCTATAAAAAGGAGCAAAGTAGAAAAGAAGAAAGAAAATAATAATAATAATAATAAAACAAGATTACTAGAGATTGCTTCAACTATTAAGAATAAAAAATAGGATAGTTACAGAGTACCAGAATACCTAGAAGGACATTGAAATTTGCTGCATTCAAAATCTCTTCCCAAGATTCTTTTTAAACGCTGAAAGGTTCTCTTGTTTCTCTCTAGCCATAGATTTCACAATGTAATGAAGAATCTTGCCTGCCAGTGCCAAATAATAAATCTTTTTTACTAAAGGAGGAATTTACCAATACCACCTCCATGGCCCTTCAACCTCTGGGAGGCACATTGGCTCCAAACATATTCAAGAATTTGCTCCATAGTGTCAATGTAAAGTGGCAACTTCAAATCACATGAATGAGAGCCTCTGTAGATCCCTTTCACACATCACATGCCATGATGCAACTCACCACTGTCATCGGGACATAAAACCATGGATGAAGATCTTTGAATGAAGTTAGAGTGTTTAACCTTCCCAAAGAAACCAATGAAGCAAAGAACTTAATCTTCTCTGGATTTTTCCAGATCAGGGAGAAGAAAGAGGAGACAGGAGGAGGATTGGATTCAGACACTAAATGGGCAAGAAGAGACTTCCTAGAGAACGCTCCTGAAGGCTCAAGAATCCATTTGAAGTTCGGGATAGGCAAACCCCTTGTCGAAACAAAAAGGAGATTAGCCAAATCTTCAGATTCATGATCATTAAAGGATCTTCTTAAATGAAAAATCATAATCTTTATGGAGGGTAGAAGTAGAATGTAGACGAACTATAATTGAGAGGATTAAAACAGAATTGACAAGCACTTCATTTCCAAGGATAAAGAAGTGGGGAAGAACAACTTGGGAAGAATTATTTCCGATCGTGAAGTCCTCCGGGAAACAAATACGAGTCCCATTTTCCATGGAAATTTTGATGAAATTGTTAAAGAAGGGGATTAGTGAAAATACCTGCAATACGTAAGTAGCTATCTTTAAATTTGGTGGCTATTAATGTTCTAAATCACATGTTTCAACAATTGATTGTCAGTGACGTGAACTACAGGCTCGGTTTTGTTGGAGTTAACTGACCACTGGAAGGAACCTAAACCGTTCCACCTGTCTTTTATGAGACGATTTGTGTGTCAGTGAAGTAACTGAGTTGTTGATGTTTGACATCTATCACCAGCCACCTCCTCTTATTTGCAGGATGCTGAGGCATCTGCTAAAAGAGATGAAACAGCAAGGAAGCGTGCAGAAGATATAGCCTCGGGAGCGGTGCAAATGAATGGGCGAGAGCTTTTCCTGCACCAACCATGGGTTTTTGACAATACTCAATATTGAGGTTGGTGGTTTAAGATGGAAATATTGTGGTGCTAGTTTTTGTGGTCTCTTGAGAAATTGGCTTTATACTTTAAAATGCTACCTTGTATTGTATTAGATATTCATCATTCATACGAGTTAGTAGTTCTTCCGCTCAAAAAAATTCCTCTCTTTGGTTATGGTAGCCATATATGAATCTGTTTAGGTTTCATCGCATGGTAAAAGTTGTACAATTGGACCAATTGGTTCTAGAAAATGATGCATCCAATTTACGCTGATTTGCCCTATGCTGTTGGGCTAAAATGACTTCATAATATGCATTTGTCTTCTCCAGTCTACAAATCATGCGTAAATAAATGTTATGTTTCCTTTCTAAATAGGTCCTACATGATGAAAGATTTCATTAGGGCATCAAAATCATGTAGTGTCCATGGTTTTGG

mRNA sequence

GTTTTCTCATCTTTATTCGAATAAAACAGAGGCTGCGGCAATTCGTAGAGGTTGTTTATCAAATCCAAGAAATTGATATACAGTAAACAGAATGGGGGCAGAAGGAGCAACGGAACAAGAGAAGTGCGCATCTCATAATCCAAGGACGGTTCCGATCACGGAAGCTCAGTTCCTATCCTGGAAGCGGCAGAAGGATGCTGAGGCATCTGCTAAAAGAGATGAAACAGCAAGGAAGCGTGCAGAAGATATAGCCTCGGGAGCGGTGCAAATGAATGGGCGAGAGCTTTTCCTGCACCAACCATGGGTTTTTGACAATACTCAATATTGAGGTTGGTGGTTTAAGATGGAAATATTGTGGTGCTAGTTTTTGTGGTCTCTTGAGAAATTGGCTTTATACTTTAAAATGCTACCTTGTATTGTATTAGATATTCATCATTCATACGAGTTAGTAGTTCTTCCGCTCAAAAAAATTCCTCTCTTTGGTTATGGTAGCCATATATGAATCTGTTTAGGTTTCATCGCATGGTAAAAGTTGTACAATTGGACCAATTGGTTCTAGAAAATGATGCATCCAATTTACGCTGATTTGCCCTATGCTGTTGGGCTAAAATGACTTCATAATATGCATTTGTCTTCTCCAGTCTACAAATCATGCGTAAATAAATGTTATGTTTCCTTTCTAAATAGGTCCTACATGATGAAAGATTTCATTAGGGCATCAAAATCATGTAGTGTCCATGGTTTTGG

Coding sequence (CDS)

ATGGGGGCAGAAGGAGCAACGGAACAAGAGAAGTGCGCATCTCATAATCCAAGGACGGTTCCGATCACGGAAGCTCAGTTCCTATCCTGGAAGCGGCAGAAGGATGCTGAGGCATCTGCTAAAAGAGATGAAACAGCAAGGAAGCGTGCAGAAGATATAGCCTCGGGAGCGGTGCAAATGAATGGGCGAGAGCTTTTCCTGCACCAACCATGGGTTTTTGACAATACTCAATATTGA

Protein sequence

MGAEGATEQEKCASHNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
BLAST of Bhi12G001100 vs. TAIR10
Match: AT1G22140.1 (unknown protein)

HSP 1 Score: 89.0 bits (219), Expect = 1.4e-18
Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 0

Query: 17 PRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNT 76
          P  + I++ QFL+WKRQKDAE  AK+ E ARKR EDIASG V MNGRELFLH+PWVFD+T
Sbjct: 11 PTQISISKDQFLAWKRQKDAELLAKQAEAARKRQEDIASGRVPMNGRELFLHEPWVFDDT 70

Query: 77 QY 79
           +
Sbjct: 71 HH 72

BLAST of Bhi12G001100 vs. TrEMBL
Match: tr|A0A1S3CCP9|A0A1S3CCP9_CUCME (zinc finger CCCH domain-containing protein 15 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499290 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.7e-29
Identity = 67/75 (89.33%), Postives = 70/75 (93.33%), Query Frame = 0

Query: 4  EGATEQEKCASHNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIASGAVQMNGR 63
          E A EQEK + +NPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIA GAVQMNGR
Sbjct: 5  EAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQMNGR 64

Query: 64 ELFLHQPWVFDNTQY 79
          ELFLHQPWVFDN+QY
Sbjct: 65 ELFLHQPWVFDNSQY 79

BLAST of Bhi12G001100 vs. TrEMBL
Match: tr|A0A0A0KN87|A0A0A0KN87_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G407070 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.4e-28
Identity = 70/80 (87.50%), Postives = 74/80 (92.50%), Query Frame = 0

Query: 1  MGA-EGATEQEK-CASHNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIASGAV 60
          MGA E A EQEK  +SHNPRTVPITEAQFLSWKR+KDAEASAKR+ETARKRAEDIA GAV
Sbjct: 1  MGAEEAAMEQEKNLSSHNPRTVPITEAQFLSWKRRKDAEASAKREETARKRAEDIALGAV 60

Query: 61 QMNGRELFLHQPWVFDNTQY 79
          QMNGRELFLHQPWVFDN+QY
Sbjct: 61 QMNGRELFLHQPWVFDNSQY 80

BLAST of Bhi12G001100 vs. TrEMBL
Match: tr|A0A061FNI6|A0A061FNI6_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_047076 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.5e-22
Identity = 54/74 (72.97%), Postives = 63/74 (85.14%), Query Frame = 0

Query: 5  GATEQEKCASHNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIASGAVQMNGRE 64
          GA E++K     PRT PITE+QFL+WK QKDA+ASAK+ E ARKRAEDIA+G VQMNGRE
Sbjct: 2  GAEEEQKQEKEQPRTNPITESQFLAWKGQKDADASAKKAEAARKRAEDIAAGTVQMNGRE 61

Query: 65 LFLHQPWVFDNTQY 79
          LFLH+PWVFDN+QY
Sbjct: 62 LFLHEPWVFDNSQY 75

BLAST of Bhi12G001100 vs. TrEMBL
Match: tr|A0A2I4FBB1|A0A2I4FBB1_9ROSI (zinc finger CCCH domain-containing protein 15 homolog OS=Juglans regia OX=51240 GN=LOC108997222 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.4e-22
Identity = 55/78 (70.51%), Postives = 65/78 (83.33%), Query Frame = 0

Query: 1  MGAEGATEQEKCASHNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIASGAVQM 60
          MGAEG  EQEK  + NP+   IT+AQFLSWKRQKD++ASA++ E ARKR EDIA+G VQM
Sbjct: 1  MGAEG-EEQEKQGNQNPKPNAITQAQFLSWKRQKDSDASARKAEAARKRGEDIAAGTVQM 60

Query: 61 NGRELFLHQPWVFDNTQY 79
          NGRELF H+PWVFDNT+Y
Sbjct: 61 NGRELFAHEPWVFDNTRY 77

BLAST of Bhi12G001100 vs. TrEMBL
Match: tr|A0A2N9IL86|A0A2N9IL86_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53110 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.7e-21
Identity = 55/77 (71.43%), Postives = 62/77 (80.52%), Query Frame = 0

Query: 1  MGAEGATEQEKCASHNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIASGAVQM 60
          MGAE  T QEK  +  PR   IT AQFLSWKRQKDA+ASA++ E  RKRAEDIASGAVQM
Sbjct: 1  MGAEAETGQEKQGAEKPRPNSITPAQFLSWKRQKDADASARKAEAERKRAEDIASGAVQM 60

Query: 61 NGRELFLHQPWVFDNTQ 78
          NGRELFLH+PWVFD+ +
Sbjct: 61 NGRELFLHEPWVFDDAR 77

BLAST of Bhi12G001100 vs. NCBI nr
Match: XP_022141384.1 (zinc finger CCCH domain-containing protein 15 homolog [Momordica charantia])

HSP 1 Score: 139.0 bits (349), Expect = 6.7e-30
Identity = 71/81 (87.65%), Postives = 73/81 (90.12%), Query Frame = 0

Query: 1  MGAE---GATEQEKCASHNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIASGA 60
          MGAE    A E+EK  SHNPRT PITEAQFLSWKRQKDAEASAKRDETARKRAEDIA+GA
Sbjct: 1  MGAEEAAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGA 60

Query: 61 VQMNGRELFLHQPWVFDNTQY 79
          VQMNGRELFLHQPWVFDNTQY
Sbjct: 61 VQMNGRELFLHQPWVFDNTQY 81

BLAST of Bhi12G001100 vs. NCBI nr
Match: XP_022939418.1 (zinc finger CCCH domain-containing protein 15 homolog [Cucurbita moschata] >XP_023549915.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.0 bits (349), Expect = 6.7e-30
Identity = 70/79 (88.61%), Postives = 73/79 (92.41%), Query Frame = 0

Query: 1  MGA-EGATEQEKCASHNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIASGAVQ 60
          MGA E A EQEK AS NPRT+PITE QFLSWKRQKDAEASAKRDETARKRA+DIASGAVQ
Sbjct: 1  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKDAEASAKRDETARKRADDIASGAVQ 60

Query: 61 MNGRELFLHQPWVFDNTQY 79
          MNGRELFLHQPWVFDN+QY
Sbjct: 61 MNGRELFLHQPWVFDNSQY 79

BLAST of Bhi12G001100 vs. NCBI nr
Match: XP_022992866.1 (zinc finger CCCH domain-containing protein 15 homolog [Cucurbita maxima])

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-29
Identity = 67/75 (89.33%), Postives = 70/75 (93.33%), Query Frame = 0

Query: 4  EGATEQEKCASHNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIASGAVQMNGR 63
          E A EQEK AS NPRT+PITE QFLSWKRQKDAEASAKRDETARKRA+DIASGAVQMNGR
Sbjct: 5  EAAMEQEKLASRNPRTIPITETQFLSWKRQKDAEASAKRDETARKRADDIASGAVQMNGR 64

Query: 64 ELFLHQPWVFDNTQY 79
          ELFLHQPWVFDN+QY
Sbjct: 65 ELFLHQPWVFDNSQY 79

BLAST of Bhi12G001100 vs. NCBI nr
Match: XP_022990599.1 (zinc finger CCCH domain-containing protein 15 homolog [Cucurbita maxima] >XP_023545022.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 136.3 bits (342), Expect = 4.3e-29
Identity = 70/79 (88.61%), Postives = 71/79 (89.87%), Query Frame = 0

Query: 1  MGA-EGATEQEKCASHNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIASGAVQ 60
          MGA E A EQEK ASH+P   PITEAQFLSWKR KDAEASAKRDETARKRAEDIASGAVQ
Sbjct: 1  MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQ 60

Query: 61 MNGRELFLHQPWVFDNTQY 79
          MNGRELFLHQPWVFDNTQY
Sbjct: 61 MNGRELFLHQPWVFDNTQY 79

BLAST of Bhi12G001100 vs. NCBI nr
Match: XP_008460490.1 (PREDICTED: zinc finger CCCH domain-containing protein 15 homolog isoform X2 [Cucumis melo] >XP_016902565.1 PREDICTED: zinc finger CCCH domain-containing protein 15 homolog isoform X2 [Cucumis melo] >XP_016902566.1 PREDICTED: zinc finger CCCH domain-containing protein 15 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 136.0 bits (341), Expect = 5.6e-29
Identity = 67/75 (89.33%), Postives = 70/75 (93.33%), Query Frame = 0

Query: 4  EGATEQEKCASHNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIASGAVQMNGR 63
          E A EQEK + +NPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIA GAVQMNGR
Sbjct: 5  EAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQMNGR 64

Query: 64 ELFLHQPWVFDNTQY 79
          ELFLHQPWVFDN+QY
Sbjct: 65 ELFLHQPWVFDNSQY 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT1G22140.11.4e-1867.74unknown protein[more]
Match NameE-valueIdentityDescription
tr|A0A1S3CCP9|A0A1S3CCP9_CUCME3.7e-2989.33zinc finger CCCH domain-containing protein 15 homolog isoform X2 OS=Cucumis melo... [more]
tr|A0A0A0KN87|A0A0A0KN87_CUCSA1.4e-2887.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G407070 PE=4 SV=1[more]
tr|A0A061FNI6|A0A061FNI6_THECC1.5e-2272.97Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_047076 PE=4 ... [more]
tr|A0A2I4FBB1|A0A2I4FBB1_9ROSI4.4e-2270.51zinc finger CCCH domain-containing protein 15 homolog OS=Juglans regia OX=51240 ... [more]
tr|A0A2N9IL86|A0A2N9IL86_FAGSY1.7e-2171.43Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53110 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022141384.16.7e-3087.65zinc finger CCCH domain-containing protein 15 homolog [Momordica charantia][more]
XP_022939418.16.7e-3088.61zinc finger CCCH domain-containing protein 15 homolog [Cucurbita moschata] >XP_0... [more]
XP_022992866.11.5e-2989.33zinc finger CCCH domain-containing protein 15 homolog [Cucurbita maxima][more]
XP_022990599.14.3e-2988.61zinc finger CCCH domain-containing protein 15 homolog [Cucurbita maxima] >XP_023... [more]
XP_008460490.15.6e-2989.33PREDICTED: zinc finger CCCH domain-containing protein 15 homolog isoform X2 [Cuc... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR032378ZC3H15/TMA46_C
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0008150 biological_process
cellular_component GO:0005829 cytosol
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M001100Bhi12M001100mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032378ZC3H15/TMA46 family, C-terminalPFAMPF16543DFRP_Ccoord: 16..74
e-value: 2.1E-8
score: 34.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR12681ZINC FINGER-CONTAINING PROTEIN P48ZNFcoord: 8..78