MELO3C021616.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C021616.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionDVL11
Locationchr09 : 4481035 .. 4482520 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCCTCTTCACTCTTCAAACCAAAATTAAATTAAATAAATTTCAATATCTTCCTTTTTCTCTTCTCTCTCCCTTCTCCTTTCCTTCAATCCCTCCAATCTCTTCCTCACTGAAACTTGAAAGAGTGTGACCAAAAAAAGCTGTAATCTTCTTCTGCTTCATCCATGGCTTCCATAGTCGCTGCTACTGCAACAACAACAACTACTACTACTACTACTACTTCAACTATTACTCCCACTGATCCCCCTTTTTACTTTGATGAGAAATGGAAGTTCTCCAAGAAGGAAGGTTTAAGCAGATCAACTCGTTCTTCCTCTTTCCCCATCATCAAAAATTCCTCTCACAGACGTTGTTCTTTCACAAGAAAGTGCGCTAGATTAGTCAAAGAGCAGAGAGCTCGATTCTACATCATGAGACGTTGTGTCACCATGCTCATCTGTTGGCACGATTACACCGATTCTTGAGCCTACCCATCTCCTGAAACTCATAAATCTAAAATACACATAAGAGAGAGATTTTTAAAATTTTCTCTCTCTTTCCATCACATGGGTCAGGTCGAGAAACACGCTTCAAAACAGAGAAAACTCCCAGATTGGCGTATTGAAGAAGAAGAAGAAGAAGATGGATGCATACATAGATACACATACATACATACAGCCAGGTGAGAGAAAACAAGATGATCTCTTCTCATAAAAAAAAAGTTGTTAATGTTAAGCGAGATCGATGAAGAAGAAAACCCCCTCGATTGAGAAGAATATGTATGTTTTGTTCTGTTTTCTCTTTGTTTGTTTGTTCGTTCTTGGTCACTGAATCTCCATTAGAGTCGGTGTTTGGTGTAACTTTGTTCAGAGTTGTATGAGAATATGGAGAAAGAGAAAAGAGAGAGTTGAAAAGGATTAAAGAGGGGTTATTTGTGATGTGAAAGAGAATCAGAAAGTGAAAGGAATTTGATTTATGGTGGTGTAAATGGGGATCGAAATTGATGATGAGGAGTCTTTCTCAGATCTCTCTGGATTTACAAATTTTGAGATTTTAGAGAGGAAAGAGATGAAATAAAAATGGTAGAATTTGGGGAGGTGAGTATTTTATGGATCTAGTGTGCTTCTTCTGACAAAAAAACAATTAATAATTAATAAACTTTGTTCCAATTGTTTAATTACTTACACATACAACAATATATAATTATAATTATATATGAAAAACAGAGTGTTTGAACAACATGGATCAACGTGGGGTGTGGGAAACAGTGATGAGATGAGATGAGATGAGATGAGAGGAGGCTCCTTCAATTCAATTCTCCAAGGGCCAAAGGCCAAAGGCCAAACTACTTCCACCCACTTTTCTTATTTTTGTATCTATCAAAGCCCTTACAGATTTGATCCTTCAAACTTTGGAAAGAATATGCCATTAGGTTATGTCACTTCAATATTTCATGAAATTGTTGCCATCACTTTAATCATTAATCCATATGTCAATTCTTGCCTT

mRNA sequence

ATTTCCTCTTCACTCTTCAAACCAAAATTAAATTAAATAAATTTCAATATCTTCCTTTTTCTCTTCTCTCTCCCTTCTCCTTTCCTTCAATCCCTCCAATCTCTTCCTCACTGAAACTTGAAAGAGTGTGACCAAAAAAAGCTGTAATCTTCTTCTGCTTCATCCATGGCTTCCATAGTCGCTGCTACTGCAACAACAACAACTACTACTACTACTACTACTTCAACTATTACTCCCACTGATCCCCCTTTTTACTTTGATGAGAAATGGAAGTTCTCCAAGAAGGAAGGTTTAAGCAGATCAACTCGTTCTTCCTCTTTCCCCATCATCAAAAATTCCTCTCACAGACGTTGTTCTTTCACAAGAAAGTGCGCTAGATTAGTCAAAGAGCAGAGAGCTCGATTCTACATCATGAGACGTTGTGTCACCATGCTCATCTGTTGGCACGATTACACCGATTCTTGAGCCTACCCATCTCCTGAAACTCATAAATCTAAAATACACATAAGAGAGAGATTTTTAAAATTTTCTCTCTCTTTCCATCACATGGGTCAGGTCGAGAAACACGCTTCAAAACAGAGAAAACTCCCAGATTGGCGTATTGAAGAAGAAGAAGAAGAAGATGGATGCATACATAGATACACATACATACATACAGCCAGGTGAGAGAAAACAAGATGATCTCTTCTCATAAAAAAAAAGTTGTTAATGTTAAGCGAGATCGATGAAGAAGAAAACCCCCTCGATTGAGAAGAATATGTATGTTTTGTTCTGTTTTCTCTTTGTTTGTTTGTTCGTTCTTGGTCACTGAATCTCCATTAGAGTCGGTGTTTGGTGTAACTTTGTTCAGAGTTGTATGAGAATATGGAGAAAGAGAAAAGAGAGAGTTGAAAAGGATTAAAGAGGGGTTATTTGTGATGTGAAAGAGAATCAGAAAGTGAAAGGAATTTGATTTATGGTGGTGTAAATGGGGATCGAAATTGATGATGAGGAGTCTTTCTCAGATCTCTCTGGATTTACAAATTTTGAGATTTTAGAGAGGAAAGAGATGAAATAAAAATGGTAGAATTTGGGGAGGTGAGTATTTTATGGATCTAGTGTGCTTCTTCTGACAAAAAAACAATTAATAATTAATAAACTTTGTTCCAATTGTTTAATTACTTACACATACAACAATATATAATTATAATTATATATGAAAAACAGAGTGTTTGAACAACATGGATCAACGTGGGGTGTGGGAAACAGTGATGAGATGAGATGAGATGAGATGAGAGGAGGCTCCTTCAATTCAATTCTCCAAGGGCCAAAGGCCAAAGGCCAAACTACTTCCACCCACTTTTCTTATTTTTGTATCTATCAAAGCCCTTACAGATTTGATCCTTCAAACTTTGGAAAGAATATGCCATTAGGTTATGTCACTTCAATATTTCATGAAATTGTTGCCATCACTTTAATCATTAATCCATATGTCAATTCTTGCCTT

Coding sequence (CDS)

ATGGCTTCCATAGTCGCTGCTACTGCAACAACAACAACTACTACTACTACTACTACTTCAACTATTACTCCCACTGATCCCCCTTTTTACTTTGATGAGAAATGGAAGTTCTCCAAGAAGGAAGGTTTAAGCAGATCAACTCGTTCTTCCTCTTTCCCCATCATCAAAAATTCCTCTCACAGACGTTGTTCTTTCACAAGAAAGTGCGCTAGATTAGTCAAAGAGCAGAGAGCTCGATTCTACATCATGAGACGTTGTGTCACCATGCTCATCTGTTGGCACGATTACACCGATTCTTGA

Protein sequence

MASIVAATATTTTTTTTTTSTITPTDPPFYFDEKWKFSKKEGLSRSTRSSSFPIIKNSSHRRCSFTRKCARLVKEQRARFYIMRRCVTMLICWHDYTDS
BLAST of MELO3C021616.2 vs. NCBI nr
Match: XP_011655374.1 (PREDICTED: uncharacterized protein LOC105435519 [Cucumis sativus] >KGN51326.1 hypothetical protein Csa_5G517730 [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 8.2e-33
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0

Query: 29  FYFDEKWKFSKKEGLSRSTRSSSFPIIKNSSHRRCSFTRKCARLVKEQRARFYIMRRCVT 88
           FYFDEKWKFSKKEGL+RSTRSSSFPIIKNSSHRRCSFTRKCARLVKEQRARFYIMRRCVT
Sbjct: 23  FYFDEKWKFSKKEGLNRSTRSSSFPIIKNSSHRRCSFTRKCARLVKEQRARFYIMRRCVT 82

Query: 89  MLICWHDYTDS 100
           MLICWHDYTDS
Sbjct: 83  MLICWHDYTDS 93

BLAST of MELO3C021616.2 vs. NCBI nr
Match: XP_022938385.1 (uncharacterized protein LOC111444651 [Cucurbita moschata])

HSP 1 Score: 135.2 bits (339), Expect = 1.2e-28
Identity = 64/73 (87.67%), Postives = 69/73 (94.52%), Query Frame = 0

Query: 27  PPFYFDEKWKFSKKEGLSRSTRSSSFPIIKNSSHRRCSFTRKCARLVKEQRARFYIMRRC 86
           P FYFD+KWK SKKEGL+R TRSSSFP+IK SSHRRCSFTRKCARLV++QRARFYIMRRC
Sbjct: 21  PSFYFDDKWKTSKKEGLTR-TRSSSFPLIKTSSHRRCSFTRKCARLVEQQRARFYIMRRC 80

Query: 87  VTMLICWHDYTDS 100
           VTMLICWHDYTDS
Sbjct: 81  VTMLICWHDYTDS 92

BLAST of MELO3C021616.2 vs. NCBI nr
Match: OAY46117.1 (hypothetical protein MANES_07G117800 [Manihot esculenta])

HSP 1 Score: 131.3 bits (329), Expect = 1.8e-27
Identity = 62/73 (84.93%), Postives = 66/73 (90.41%), Query Frame = 0

Query: 27  PPFYFDEKWKFSKKEGLSRSTRSSSFPIIKNSSHRRCSFTRKCARLVKEQRARFYIMRRC 86
           P FYFD+KWK SKKEG SRS+RSSS P +KNSS RRCSFTRKCARLVKEQRARFYIMRRC
Sbjct: 13  PQFYFDQKWKLSKKEGSSRSSRSSSSPFMKNSSQRRCSFTRKCARLVKEQRARFYIMRRC 72

Query: 87  VTMLICWHDYTDS 100
           VTMLICW DY+DS
Sbjct: 73  VTMLICWRDYSDS 85

BLAST of MELO3C021616.2 vs. NCBI nr
Match: EEF30810.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 124.8 bits (312), Expect = 1.6e-25
Identity = 61/76 (80.26%), Postives = 66/76 (86.84%), Query Frame = 0

Query: 27  PPFYFDEKWKFSKKEGLSRSTRSSSFPIIKN---SSHRRCSFTRKCARLVKEQRARFYIM 86
           P FYFDEKWK SKKEG SRS RSS+ P++KN   SS RRCSFTRKCARLVKEQRARFYI+
Sbjct: 13  PQFYFDEKWKLSKKEGSSRSVRSSTSPLMKNSSSSSQRRCSFTRKCARLVKEQRARFYIV 72

Query: 87  RRCVTMLICWHDYTDS 100
           RRCVTMLICW DY+DS
Sbjct: 73  RRCVTMLICWRDYSDS 88

BLAST of MELO3C021616.2 vs. NCBI nr
Match: OAY38611.1 (hypothetical protein MANES_10G028700 [Manihot esculenta])

HSP 1 Score: 124.4 bits (311), Expect = 2.2e-25
Identity = 59/73 (80.82%), Postives = 65/73 (89.04%), Query Frame = 0

Query: 27  PPFYFDEKWKFSKKEGLSRSTRSSSFPIIKNSSHRRCSFTRKCARLVKEQRARFYIMRRC 86
           P FYF+EKWK SKKEG SRS+RSS+ P++KNSS RR SFTRKCARLVKEQRARFYIMRRC
Sbjct: 13  PQFYFNEKWKLSKKEGSSRSSRSSTSPLMKNSSQRRSSFTRKCARLVKEQRARFYIMRRC 72

Query: 87  VTMLICWHDYTDS 100
           V MLICW DY+DS
Sbjct: 73  VAMLICWRDYSDS 85

BLAST of MELO3C021616.2 vs. TAIR10
Match: AT2G39705.1 (ROTUNDIFOLIA like 8)

HSP 1 Score: 90.5 bits (223), Expect = 6.2e-19
Identity = 50/74 (67.57%), Postives = 54/74 (72.97%), Query Frame = 0

Query: 30  YFDEKWKFSKKE-GLSRSTRSS--SFPIIKNSSHRRCSFTRKCARLVKEQRARFYIMRRC 89
           + DEKWK SKK+ G SR TRSS  S          RC+FTRKCARLVKEQRARFYIMRRC
Sbjct: 14  HLDEKWKLSKKDGGASRITRSSSTSSSSFNGKKQGRCAFTRKCARLVKEQRARFYIMRRC 73

Query: 90  VTMLICWHD-YTDS 100
           V MLICW D Y+DS
Sbjct: 74  VIMLICWRDNYSDS 87

BLAST of MELO3C021616.2 vs. TAIR10
Match: AT3G55515.1 (ROTUNDIFOLIA like 7)

HSP 1 Score: 65.9 bits (159), Expect = 1.6e-11
Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = 0

Query: 36  KFSKKEGLSRSTRSSSFPIIKNSSHRRCSFTRKCARLVKEQRARFYIMRRCVTMLICWHD 95
           + SKKE L  +  + +          +  FTRKC RLVKEQRARFYIMRRCV MLICW D
Sbjct: 11  QLSKKESLGDNGGALNTTRSSRQKQGKYGFTRKCGRLVKEQRARFYIMRRCVVMLICWTD 70

Query: 96  YTDS 100
           + ++
Sbjct: 71  HNNN 74

BLAST of MELO3C021616.2 vs. TAIR10
Match: AT2G36985.1 (DVL family protein)

HSP 1 Score: 55.1 bits (131), Expect = 2.9e-08
Identity = 20/32 (62.50%), Postives = 29/32 (90.62%), Query Frame = 0

Query: 64 SFTRKCARLVKEQRARFYIMRRCVTMLICWHD 96
          +F +KC+ +VK+QRA+FYI+RRC+ ML+CWHD
Sbjct: 14 TFGQKCSHVVKKQRAKFYILRRCIAMLVCWHD 45

BLAST of MELO3C021616.2 vs. TAIR10
Match: AT5G59510.1 (ROTUNDIFOLIA like 5)

HSP 1 Score: 54.3 bits (129), Expect = 5.0e-08
Identity = 23/51 (45.10%), Postives = 35/51 (68.63%), Query Frame = 0

Query: 46  STRSSSFPIIKNSSHRRCSFTRKCARLVKEQRARFYIMRRCVTMLICWHDY 97
           ++ +S   I ++ S +  S TRKC  + KE ++RFYIM+RCV ML+CWH +
Sbjct: 90  TSSTSKCSISRSLSQKGASVTRKCRNMAKEHKSRFYIMKRCVLMLVCWHKH 140

BLAST of MELO3C021616.2 vs. TAIR10
Match: AT3G14362.1 (ROTUNDIFOLIA like 10)

HSP 1 Score: 53.5 bits (127), Expect = 8.5e-08
Identity = 24/44 (54.55%), Postives = 31/44 (70.45%), Query Frame = 0

Query: 55 IKNSSHRRCSFTRKCARLVKEQRARFYIMRRCVTMLICWHDYTD 99
          +K   ++  +FT KC  LVKEQRAR YI+RRC TML CW+ + D
Sbjct: 4  LKRKFNKGHAFTSKCVSLVKEQRARLYILRRCATMLCCWYIHGD 47

BLAST of MELO3C021616.2 vs. TrEMBL
Match: tr|A0A0A0KUB0|A0A0A0KUB0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517730 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.4e-33
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0

Query: 29  FYFDEKWKFSKKEGLSRSTRSSSFPIIKNSSHRRCSFTRKCARLVKEQRARFYIMRRCVT 88
           FYFDEKWKFSKKEGL+RSTRSSSFPIIKNSSHRRCSFTRKCARLVKEQRARFYIMRRCVT
Sbjct: 23  FYFDEKWKFSKKEGLNRSTRSSSFPIIKNSSHRRCSFTRKCARLVKEQRARFYIMRRCVT 82

Query: 89  MLICWHDYTDS 100
           MLICWHDYTDS
Sbjct: 83  MLICWHDYTDS 93

BLAST of MELO3C021616.2 vs. TrEMBL
Match: tr|A0A2C9VKL2|A0A2C9VKL2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G117800 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-27
Identity = 62/73 (84.93%), Postives = 66/73 (90.41%), Query Frame = 0

Query: 27  PPFYFDEKWKFSKKEGLSRSTRSSSFPIIKNSSHRRCSFTRKCARLVKEQRARFYIMRRC 86
           P FYFD+KWK SKKEG SRS+RSSS P +KNSS RRCSFTRKCARLVKEQRARFYIMRRC
Sbjct: 13  PQFYFDQKWKLSKKEGSSRSSRSSSSPFMKNSSQRRCSFTRKCARLVKEQRARFYIMRRC 72

Query: 87  VTMLICWHDYTDS 100
           VTMLICW DY+DS
Sbjct: 73  VTMLICWRDYSDS 85

BLAST of MELO3C021616.2 vs. TrEMBL
Match: tr|B9T005|B9T005_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0040480 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-25
Identity = 61/76 (80.26%), Postives = 66/76 (86.84%), Query Frame = 0

Query: 27  PPFYFDEKWKFSKKEGLSRSTRSSSFPIIKN---SSHRRCSFTRKCARLVKEQRARFYIM 86
           P FYFDEKWK SKKEG SRS RSS+ P++KN   SS RRCSFTRKCARLVKEQRARFYI+
Sbjct: 13  PQFYFDEKWKLSKKEGSSRSVRSSTSPLMKNSSSSSQRRCSFTRKCARLVKEQRARFYIV 72

Query: 87  RRCVTMLICWHDYTDS 100
           RRCVTMLICW DY+DS
Sbjct: 73  RRCVTMLICWRDYSDS 88

BLAST of MELO3C021616.2 vs. TrEMBL
Match: tr|A0A2C9V2X7|A0A2C9V2X7_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G028700 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-25
Identity = 59/73 (80.82%), Postives = 65/73 (89.04%), Query Frame = 0

Query: 27  PPFYFDEKWKFSKKEGLSRSTRSSSFPIIKNSSHRRCSFTRKCARLVKEQRARFYIMRRC 86
           P FYF+EKWK SKKEG SRS+RSS+ P++KNSS RR SFTRKCARLVKEQRARFYIMRRC
Sbjct: 13  PQFYFNEKWKLSKKEGSSRSSRSSTSPLMKNSSQRRSSFTRKCARLVKEQRARFYIMRRC 72

Query: 87  VTMLICWHDYTDS 100
           V MLICW DY+DS
Sbjct: 73  VAMLICWRDYSDS 85

BLAST of MELO3C021616.2 vs. TrEMBL
Match: tr|A0A151S170|A0A151S170_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_029800 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.1e-24
Identity = 60/75 (80.00%), Postives = 65/75 (86.67%), Query Frame = 0

Query: 27  PPFYFDEKWKFSKKEGLSRS-TRSSSFPIIK-NSSHRRCSFTRKCARLVKEQRARFYIMR 86
           PP YFDEKWK SKKEG +RS +RSSS P IK NSSHR+C+F  KCARLVKEQRARFYIMR
Sbjct: 13  PPLYFDEKWKLSKKEGSARSCSRSSSTPFIKSNSSHRKCAFASKCARLVKEQRARFYIMR 72

Query: 87  RCVTMLICWHDYTDS 100
           RCVTMLICW DY+DS
Sbjct: 73  RCVTMLICWRDYSDS 87

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011655374.18.2e-3398.59PREDICTED: uncharacterized protein LOC105435519 [Cucumis sativus] >KGN51326.1 hy... [more]
XP_022938385.11.2e-2887.67uncharacterized protein LOC111444651 [Cucurbita moschata][more]
OAY46117.11.8e-2784.93hypothetical protein MANES_07G117800 [Manihot esculenta][more]
EEF30810.11.6e-2580.26conserved hypothetical protein [Ricinus communis][more]
OAY38611.12.2e-2580.82hypothetical protein MANES_10G028700 [Manihot esculenta][more]
Match NameE-valueIdentityDescription
AT2G39705.16.2e-1967.57ROTUNDIFOLIA like 8[more]
AT3G55515.11.6e-1151.56ROTUNDIFOLIA like 7[more]
AT2G36985.12.9e-0862.50DVL family protein[more]
AT5G59510.15.0e-0845.10ROTUNDIFOLIA like 5[more]
AT3G14362.18.5e-0854.55ROTUNDIFOLIA like 10[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KUB0|A0A0A0KUB0_CUCSA5.4e-3398.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517730 PE=4 SV=1[more]
tr|A0A2C9VKL2|A0A2C9VKL2_MANES1.2e-2784.93Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G117800 PE=4 SV=... [more]
tr|B9T005|B9T005_RICCO1.1e-2580.26Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0040480 PE=4 SV=1[more]
tr|A0A2C9V2X7|A0A2C9V2X7_MANES1.4e-2580.82Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G028700 PE=4 SV=... [more]
tr|A0A151S170|A0A151S170_CAJCA2.1e-2480.00Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_029800 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012552DVL
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048367 shoot system development
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021616.2.1MELO3C021616.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012552DVLPFAMPF08137DVLcoord: 74..92
e-value: 2.6E-12
score: 46.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR33102:SF9DVL11-RELATEDcoord: 25..99
NoneNo IPR availablePANTHERPTHR33102FAMILY NOT NAMEDcoord: 25..99