MELO3C020280 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C020280
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionDouble-stranded RNA-binding 4
Locationchr6 : 13862581 .. 13875376 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCATCCGGTACAGTTGAAGCAGGTGCACCGCAACAATCTCCATTCCGGTCCGACTCAGTTCCAACTGTTGTTACCCCTCCTATTCCGGTACAAAACTTCCATACTCTTCAGTCTCAACCAAATATTCATCCTCCATCTGTTTTACCGGACTTAGTTCTGATTCCAAGTGCGGCTCCAGCTCCGATTCCGTCCCCTAATCTCTCTGATCCTACTCGTAAGTGTAAGGCATTGTTGCCCGTCGTTCCGTTGAGGATGCGTTTTTGTTCTTGGTGTTTGGTTATAATTGTTTAGTGTTTTCATTTCAGCAAATATCTGCTATATTAGATGGATTTCCTCTACATTTCGTGTAGTTAAATTCTCTATCTGTTTTTGTTTTCTGTTAGAGAGAGAAGCAAATGCGAGCCATTTGTGTGTGTTGAAAGAATTATTTTGTTCTCAGTATGTGTCTATGAGGTCCTGAGAATTCAATCATAAGTTGCTATGTTTTACTTCCATTTCCATCTTCTTTCCACAAATTTTGGATGGTAGGTTATTTTGTAAGTTAGAATACTGGTAGTTGTGTGGCGATGATCTAGATATTCCTTCCTTGTTCGGTCTTTAGAAAACAATTTGGAGAATTCTCTTGAAAAAAACTTCTACCGGGTTTAATTCTGGCCTAGCTTCTTAACCATAATGAATTGACTTAATGGTAAAAAAAGAAGACTTAATATCAAAAAATGGCTAAGAACTTATGGGTTCAATTCATGGGAACCACCTATCTAGAAATTAATTTACTACGAGTTTCTTTGACACCAAAATGTTGTAGGGTCAGATGGATTGTTTCGTGGATTAGTCGAAGTGTGCATAAGCTGACCCACACCCACATATATAAAAAAAAGTTCTAGCCTATCATCTTGCCCTCGATCCTTAGTGGTGTGTTCTTCGCAAGAAGAATAGTGAGACTATTTATTCACCTTCACCTCATAAGGCTGCTTTTTCTACATTCTGCTGTGTGCCTTTTGGGAGATGGAGAAACTAAAGATTAGTCGCTTCAGGCATTGGTGGATTTGACTTATAATGGGGATGCTATCTTGACAATTCTTTGGTGGATTTGATATTATTTCTTTTTTCTCACGTGATTTTTCTTTCTCTATAATTAAAGACGTGGGATCCTTTTCTTATAGTTTCTTTTGCCAGATTTGCTTGTTGGTTAGGCACTCAGGGCTATGCTTTTGTATGGTCTTTTTGTTCTTCCATTTCCCTCAATGACCATAACAGAAATGAAAGGCAAAAAGAATAGTTGTTAACTGAAGTGGAGGGTTTTGCATTGGGTTTTTCTGAGTACTTGTAACCTGACGTTGCAAATTGAGAAACCTGTAATTTTCTACCGTCGTTCGTACACGTGGACTCTTCTAATGTTCCTCCTTTCACTTTTGGGCTTCAATTTGTTTGAGTATTACTTCAATGCCTCCATCTTTATGTATCACACTCTCATCACACAAACAGAGAGAATTAAAATATTTCAAAAATGGTGTTAGAAGAATTTGGTGGGGTGTACACAGATAGCTGTTTTTCTAGATGCACATGAGTATTTTTTTTATTCATATTTTGTTCTAGTTGTGTAATACAAGACAAAGGTCCCCTCAGTTCTATTGTGCACAAATTTGTTATTTGGTGGATTTTTGTTCTTTATAAGAATGGAAGAGAAACCAATGTTATGGTTTTGCAGAAATCTTCGTGTACAAAAATCATTTGCACGAGTATGCTCAAAAGGCAAGGATTGCAGTACCAGTATACCAGACTATTGATGAGGGGTCCCCAGGTCTGCCTAAATTCAGGTCAACTGTGTTGCTTGATGAGGTACATTATGTGTCTCCTAATACCTTCCGTAATCGAAGGGCGGCTGAGCAAGATGCTGCGAGAATTGCTTTTGAGTACATATCAAAAAAGACAAAGGACGATGCCTTTCTTCTACTTCGTGAGGTACAAGTTATATAGTGATATTGAAAATTGATTTGTGGCCTTTAATTTTCAATATGCGTATAACTGTGCTTCTTTCTTTCTTTCTTTATTTCATTTCTTAAAATTTTAGTACAACATATGTGGTGGAAACTTTAGATTTAAGCTTTCTGACCGTAATGGAAGGAATAGATGCCTTCACCACTATATTATGCTCACGTGGCCATAA

mRNA sequence

ATGGAAGCATCCGGTACAGTTGAAGCAGGTGCACCGCAACAATCTCCATTCCGGTCCGACTCAGTTCCAACTGTTGTTACCCCTCCTATTCCGGTACAAAACTTCCATACTCTTCAGTCTCAACCAAATATTCATCCTCCATCTGTTTTACCGGACTTAGTTCTGATTCCAAGTGCGGCTCCAGCTCCGATTCCGTCCCCTAATCTCTCTGATCCTACTCAAATCTTCGTGTACAAAAATCATTTGCACGAGTATGCTCAAAAGGCAAGGATTGCAGTACCAGTATACCAGACTATTGATGAGGGGTCCCCAGGTCTGCCTAAATTCAGGTCAACTGTGTTGCTTGATGAGGTACATTATGTGTCTCCTAATACCTTCCGTAATCGAAGGGCGGCTGAGCAAGATGCTGCGAGAATTGCTTTTGAGTACATATCAAAAAAGACAAAGGACGATGCCTTTCTTCTACTTCGTGAGTACAACATATGTGGTGGAAACTTTAGATTTAAGCTTTCTGACCGTAATGGAAGGAATAGATGCCTTCACCACTATATTATGCTCACGTGGCCATAA

Coding sequence (CDS)

ATGGAAGCATCCGGTACAGTTGAAGCAGGTGCACCGCAACAATCTCCATTCCGGTCCGACTCAGTTCCAACTGTTGTTACCCCTCCTATTCCGGTACAAAACTTCCATACTCTTCAGTCTCAACCAAATATTCATCCTCCATCTGTTTTACCGGACTTAGTTCTGATTCCAAGTGCGGCTCCAGCTCCGATTCCGTCCCCTAATCTCTCTGATCCTACTCAAATCTTCGTGTACAAAAATCATTTGCACGAGTATGCTCAAAAGGCAAGGATTGCAGTACCAGTATACCAGACTATTGATGAGGGGTCCCCAGGTCTGCCTAAATTCAGGTCAACTGTGTTGCTTGATGAGGTACATTATGTGTCTCCTAATACCTTCCGTAATCGAAGGGCGGCTGAGCAAGATGCTGCGAGAATTGCTTTTGAGTACATATCAAAAAAGACAAAGGACGATGCCTTTCTTCTACTTCGTGAGTACAACATATGTGGTGGAAACTTTAGATTTAAGCTTTCTGACCGTAATGGAAGGAATAGATGCCTTCACCACTATATTATGCTCACGTGGCCATAA

Protein sequence

MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAAPAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHYVSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREYNICGGNFRFKLSDRNGRNRCLHHYIMLTWP*
Homology
[Close]
BLAST of MELO3C020280 vs. Swiss-Prot
Match: DRB4_ORYSJ (Double-stranded RNA-binding protein 4 OS=Oryza sativa subsp. japonica GN=DRB4 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.8e-23
Identity = 74/195 (37.95%), Postives = 108/195 (55.38%), Query Frame = 1 

Query: 58  SAAPAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDE 117
           S AP P P P+ +       YK+ L EY Q+A   +P+Y T  +G     KF+STV++D 
Sbjct: 26  SPAPLPPPPPHCN-------YKSKLQEYLQQANKQLPIYCTKCKGEHHQLKFKSTVMVDG 85

Query: 118 VHYVSPNTFRNRRAAEQDAARIAFEYISKKTKD-----DAFLLLREDLILCKSILSEYTD 177
             + S    R  + AEQDAA++A++ + ++ +      D F L+ +D++  KSIL EYT 
Sbjct: 86  EEFSSTFCHRRVKDAEQDAAKVAYDTLLERKETETDDTDVFELIDQDVVFSKSILHEYTT 145

Query: 178 KMGLERPIYTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAI 237
           K   ++P Y+    +GSV  + S++ F G  YT   +R KK+AEQ AARAA+ SL   A 
Sbjct: 146 KTKTDQPEYSVTKTEGSVTPYVSSVSFAGHTYTGGAARNKKDAEQKAARAAVKSLL--AT 205

Query: 238 NIKSQKTLADIIASK 248
           N  S   +A I+ SK
Sbjct: 206 NYTS---MAKIVRSK 208

[Close]
BLAST of MELO3C020280 vs. Swiss-Prot
Match: DRB3_ORYSJ (Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica GN=DRB3 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.5e-22
Identity = 67/171 (39.18%), Postives = 91/171 (53.22%), Query Frame = 1 

Query: 58  SAAPAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDE 117
           + +PAPI +         +V+K+ L EYAQKA +  P Y T  EG    P F+STV+++ 
Sbjct: 16  NTSPAPIGATAGIRVENCYVFKSRLQEYAQKAGLQTPEYHTSKEGPSHEPVFKSTVVINN 75

Query: 118 VHYVSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLE 177
             Y S   F NR+AAEQ AA +A   I K    +A +   ++  LCK++L EY  KM   
Sbjct: 76  TSYGSLPGFSNRKAAEQSAAEVALMEIVKSIPANANIPAVQETGLCKNLLQEYAQKMNYA 135

Query: 178 RPIY-TTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSL 228
            P Y  TK   G  P F  T+   G+ Y    +RTKK+AE  AAR A+L++
Sbjct: 136 IPSYICTKPASGLAP-FLCTVEIGGIQYIGAAARTKKDAEIKAARTALLAI 185

[Close]
BLAST of MELO3C020280 vs. Swiss-Prot
Match: DRB7_ORYSJ (Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica GN=DRB7 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 5.8e-22
Identity = 70/183 (38.25%), Postives = 95/183 (51.91%), Query Frame = 1 

Query: 46  PPSVLPDLVLIPSAAPAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPG 105
           PP+ LP      + +PAP  +         +V+K+ L EYAQKA +  P Y T  EG   
Sbjct: 4   PPTPLPPETA--NTSPAPNGATAGIRVENCYVFKSRLQEYAQKAGLQTPEYHTFKEGPSH 63

Query: 106 LPKFRSTVLLDEVHYVSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKS 165
            P F+STV+++   Y S   F NR+AAEQ AA +A   I K    +A +   ++  LCK+
Sbjct: 64  EPVFKSTVVINNTSYDSLPGFFNRKAAEQSAAEVALMEIVKSIPANANIPAVQETGLCKN 123

Query: 166 ILSEYTDKMGLERPIY-TTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAI 225
           +L EY  KM    P Y  TK   G  P F  T+   G+ Y    +RTKK+AE  AAR A+
Sbjct: 124 LLQEYAQKMNYAIPSYICTKSASGLAP-FICTVEIGGIQYIGAAARTKKDAEIKAARTAL 183

Query: 226 LSL 228
           L++
Sbjct: 184 LAI 183

[Close]
BLAST of MELO3C020280 vs. Swiss-Prot
Match: DRB1_ARATH (Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana GN=DRB1 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 5.8e-22
Identity = 63/167 (37.72%), Postives = 90/167 (53.89%), Query Frame = 1 

Query: 70  SDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHYVSPNTFRNR 129
           S  +  +V+K+ L EYAQK ++  PVY+ + EG      F+STV+LD V Y S   F NR
Sbjct: 8   SGVSNCYVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNR 67

Query: 130 RAAEQDAARIAFEYISKKTK-DDAFLLLREDLILCKSILSEYTDKMGLERPIYTTKHHK- 189
           +AAEQ AA +A   ++K ++          +  LCK++L EY  KM    P+Y  +  + 
Sbjct: 68  KAAEQSAAEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLYQCQKVET 127

Query: 190 -GSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAIN 234
            G V  F  T+   G+ YT   +RTKK+AE  A R A+L++  D  N
Sbjct: 128 LGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQSDTKN 174

[Close]
BLAST of MELO3C020280 vs. Swiss-Prot
Match: DRB8_ORYSJ (Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica GN=DRB8 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.7e-21
Identity = 69/183 (37.70%), Postives = 94/183 (51.37%), Query Frame = 1 

Query: 46  PPSVLPDLVLIPSAAPAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPG 105
           PP+ LP      + +PAP  +         +V+K+ L EYAQK  +  P Y T  EG   
Sbjct: 4   PPTPLPPETA--NTSPAPNGATAGIRVENCYVFKSRLQEYAQKTGLQTPEYHTFKEGPSH 63

Query: 106 LPKFRSTVLLDEVHYVSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKS 165
            P F+STV+++   Y S   F NR+AAEQ AA +A   I K    +A +   ++  LCK+
Sbjct: 64  EPVFKSTVVINNTSYDSLPGFFNRKAAEQSAAEVALMEIVKSIPANANIPAVQETGLCKN 123

Query: 166 ILSEYTDKMGLERPIY-TTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAI 225
           +L EY  KM    P Y  TK   G  P F  T+   G+ Y    +RTKK+AE  AAR A+
Sbjct: 124 LLQEYAQKMNYAIPSYICTKSASGLAP-FICTVEIGGIQYIGAAARTKKDAEIKAARTAL 183

Query: 226 LSL 228
           L++
Sbjct: 184 LAI 183

[Close]
BLAST of MELO3C020280 vs. TrEMBL
Match: A0A0A0LCN7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G345370 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 3.2e-104
Identity = 197/229 (86.03%), Postives = 210/229 (91.70%), Query Frame = 1 

Query: 157 REDLILCKSILSEYTDKMGLERPIYTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAE 216
           + DL+LCKSILSEYTDKMGLERPIYTTKH++GSV  FQSTLVFDGVVYTSDL RTKKEAE
Sbjct: 97  KHDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAE 156

Query: 217 QLAARAAILSLHEDAINIKSQKTLADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVE 276
           QLAARAAILSLHEDA N KSQK L DIIASKVRFHAMLQKVKDS+FSQ QPKSMPENTVE
Sbjct: 157 QLAARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVE 216

Query: 277 RVAMTVNEDKNVKDAVSDSGVVCGAISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPS 336
           RVAMTVNE K +KDAV D G+VCGAISEACPTS F+PEFS+TKP+GSSPL+RLPIEFV S
Sbjct: 217 RVAMTVNEGKELKDAVLDGGMVCGAISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRS 276

Query: 337 TLEVPVGDHATTGSKRRSKNKRKARKKLCMENGVATETSQTAAPCSVAQ 386
           TLE PVG HAT GSKR+SKNKRKARKKLCMEN VATETSQTAAPCSVA+
Sbjct: 277 TLEEPVGYHATIGSKRKSKNKRKARKKLCMENRVATETSQTAAPCSVAR 325

[Close]
BLAST of MELO3C020280 vs. TrEMBL
Match: A0A0A0LAZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G345380 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.6e-74
Identity = 141/158 (89.24%), Postives = 149/158 (94.30%), Query Frame = 1 

Query: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60
           ME SGTVEAGAPQQSPF SDSVPTVVTPPIPV+N +T Q QP+IHPPSVLPDLV IPSAA
Sbjct: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120
           PAPIPSPNLSD TQIFVYKNHLHEY QKA+IAVPVYQTIDEGSP LPK+RSTV++DEVHY
Sbjct: 61  PAPIPSPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLRE 159
           VSPNTFRNRRAAEQDAAR+AFEYISKKTKDDAFLLLRE
Sbjct: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLRE 158

[Close]
BLAST of MELO3C020280 vs. TrEMBL
Match: D7TSR3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g01440 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.5e-61
Identity = 150/335 (44.78%), Postives = 199/335 (59.40%), Query Frame = 1 

Query: 59  AAPAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEV 118
           AA    P+P+ +   +  ++KN L EY Q++ I +P+YQT++EG    PKFRSTVL+D  
Sbjct: 4   AAKVDCPAPSSTRLPEHLMHKNRLQEYTQRSAIPLPIYQTVNEGFQHAPKFRSTVLVDGA 63

Query: 119 HYVSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLER 178
            Y SPNTF +R+AAEQD AR+A E+ISKK KD+   L+RED + CKSIL+E+  KM LE+
Sbjct: 64  TYTSPNTFSHRKAAEQDVARLALEFISKKIKDEGCPLIREDTVFCKSILNEFAVKMNLEK 123

Query: 179 PIYTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAINIKSQK 238
           P YTT   +G +P+F S+LVF+GV YT D  R KKEAEQLAAR  ILS+     N  S  
Sbjct: 124 PTYTTVQPEGLLPVFVSSLVFNGVTYTGDAGRNKKEAEQLAARTVILSI---LGNSGSGT 183

Query: 239 TLADIIASKVRFHAMLQKVKDSHF--SQIQP----KSMPENTVERVAMTVNEDKNVKDAV 298
            L++II SKV+ +A L +VKD  +  + I P      +P    + V +    D+ +  AV
Sbjct: 184 LLSEIIKSKVKLYAALHRVKDPSYIHTGILPIGLTSGIPPCKGKEVEVAPGTDQLLPTAV 243

Query: 299 SDSGVVCGAISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKR 358
           S    + G +     T     E    KP  SS ++  PI FVPS  E P+    TTG KR
Sbjct: 244 SVP--LSGQLVHVPVTHPPVHELEKPKPNVSSEVIAPPISFVPSVFEQPLVVSPTTGRKR 303

Query: 359 RSKNKRKARKKLCMEN--GVATETSQTAAPCSVAQ 386
             KNK+KA KKL  +    VA      A+PCSVAQ
Sbjct: 304 NRKNKKKANKKLRTDAQLPVAVLPLNQASPCSVAQ 333

[Close]
BLAST of MELO3C020280 vs. TrEMBL
Match: A0A0B0MSI8_GOSAR (Double-stranded RNA-binding 4 OS=Gossypium arboreum GN=F383_22957 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.1e-50
Identity = 135/353 (38.24%), Postives = 187/353 (52.97%), Query Frame = 1 

Query: 42  PNIHPPSVLPDLVLIPSAA----------PAPIPSPNLSDPTQIFVYKNHLHEYAQKARI 101
           P  H P   P+LV  PSA            +P+P    S P + F++KN L E+ Q++ I
Sbjct: 4   PLAHFPQ--PELVDQPSAPVLASSNVPPLASPLPHSLRSRPPESFMHKNRLQEFTQRSSI 63

Query: 102 AVPVYQTIDEGSPGLPKFRSTVLLDEVHYVSPNTFRNRRAAEQDAARIAFEYISKKTKDD 161
            +PVYQT++EGS   P+FRS+VL+D V Y S  TF NR+AAEQD A+ A E ISKK KD+
Sbjct: 64  QLPVYQTVNEGSVHAPQFRSSVLVDGVTYTSETTFSNRKAAEQDVAKHALECISKKLKDE 123

Query: 162 AFLLLREDLILCKSILSEYTDKMGLERPIYTTKHHKGSVPLFQSTLVFDGVVYTSDLSRT 221
              L+RED + CKSIL+E+  KM LE P Y T    G +PLF STLVF+G  Y  +  R 
Sbjct: 124 GCPLIREDTVFCKSILNEFVVKMNLELPTYNTIQSGGVLPLFVSTLVFNGATYRGETGRN 183

Query: 222 KKEAEQLAARAAILSLHEDAINIKSQKTLADIIASKVRFHAMLQKVKDSHFSQIQPKSMP 281
           KKEAEQLAAR  I SL  D    +    +++II SK + +  L K KDS F         
Sbjct: 184 KKEAEQLAARVVIQSLLADD---RYGTVVSEIIKSKAKLYDALNKAKDSSF--------- 243

Query: 282 ENTVERVAMTVNEDKNVKDAVSDSGVVCGAISEACPTSLFRPEFSSTKPEGSSPLVRLPI 341
            +T    A  +N +    +  + +  V      +      R EF  +K    +  + LPI
Sbjct: 244 -DTTLAGANRLNHNNTEVENNAVTNHVPNTTHPSSGAKHLRHEFKISKSGEGTDCIDLPI 303

Query: 342 EFVPSTLEVPVGDHATTGSKRRSKNKRKARKKLCMENGVATETSQTAAPCSVA 385
            FVP+ +     D   + SK++ K K++A+     ++ VA        PCS+A
Sbjct: 304 AFVPAVIG-QGSDAGESSSKKQRKKKKRAKLNTTSQSVVAGSPFNQTTPCSLA 340

[Close]
BLAST of MELO3C020280 vs. TrEMBL
Match: A0A061EHS9_THECC (DsRNA-binding domain-like superfamily protein, putative OS=Theobroma cacao GN=TCM_019209 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.0e-50
Identity = 126/297 (42.42%), Postives = 181/297 (60.94%), Query Frame = 1 

Query: 66  SPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHYVSPNT 125
           +PN S   +  ++KN L EY Q++ I +PVYQT +EGS   P+FRSTVL+D   Y S +T
Sbjct: 19  APNPSRAPEPLMHKNRLQEYTQRSSIPLPVYQTTNEGSLHAPRFRSTVLVDGTSYTSLDT 78

Query: 126 FRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPIYTTKH 185
           F +R+AAEQDAA++A + I+KK KD+   ++RED + CKSIL+E+  KM +E P Y T  
Sbjct: 79  FSHRKAAEQDAAKVALDCITKKIKDEGCPIIREDTVFCKSILNEFAVKMNMEMPSYNTIQ 138

Query: 186 HKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAINIKSQKTLADIIA 245
            +G +PLF S+LVF+ V Y+    R KKEAEQLAARAA+LSL +D+   +    L++II 
Sbjct: 139 SEGLIPLFVSSLVFNDVTYSGKTGRNKKEAEQLAARAALLSLLDDS---RYGTFLSEIIK 198

Query: 246 SKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCGAISEA 305
           SK + +  L KVKDS  S I       NT      ++++++ ++ AV  + V    I  +
Sbjct: 199 SKAKLYVALNKVKDSSISHIGTTPAGANT------SIHKNEEIETAVVTNSVPNTVILPS 258

Query: 306 CPTSLFRPE--FSSTKPEGSSPLVRLPIEFVPSTL--EVPVGDHATTGSKRRSKNKR 359
             +   RP   F   K E  S  + LPI FVP+ +   +PVG+  ++  KRR K KR
Sbjct: 259 -SSGAKRPHHVFKIEKLEEGSEHIDLPIVFVPTAVAESLPVGE--SSSRKRRRKKKR 303

[Close]
BLAST of MELO3C020280 vs. TAIR10
Match: AT1G09700.1 (AT1G09700.1 dsRNA-binding domain-like superfamily protein)

HSP 1 Score: 106.7 bits (265), Expect = 3.3e-23
Identity = 63/167 (37.72%), Postives = 90/167 (53.89%), Query Frame = 1 

Query: 70  SDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHYVSPNTFRNR 129
           S  +  +V+K+ L EYAQK ++  PVY+ + EG      F+STV+LD V Y S   F NR
Sbjct: 8   SGVSNCYVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNR 67

Query: 130 RAAEQDAARIAFEYISKKTK-DDAFLLLREDLILCKSILSEYTDKMGLERPIYTTKHHK- 189
           +AAEQ AA +A   ++K ++          +  LCK++L EY  KM    P+Y  +  + 
Sbjct: 68  KAAEQSAAEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLYQCQKVET 127

Query: 190 -GSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAIN 234
            G V  F  T+   G+ YT   +RTKK+AE  A R A+L++  D  N
Sbjct: 128 LGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQSDTKN 174

[Close]
BLAST of MELO3C020280 vs. TAIR10
Match: AT3G26932.1 (AT3G26932.1 dsRNA-binding protein 3)

HSP 1 Score: 80.5 bits (197), Expect = 2.5e-15
Identity = 48/155 (30.97%), Postives = 81/155 (52.26%), Query Frame = 1 

Query: 77  VYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHYVSPNTFRNRRAAEQDA 136
           +YKN L E AQ++  ++P Y    EG    P+F+++V  +   + SP      R AE  A
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 137 ARIAFEYISKKTKDDAFLL-LREDLILCKSILSEYTDKMGLERPIYTT-KHHKGSVPLFQ 196
           A +A   +S K    +    + ++  + K++L E   + GL+ P+YT+ +   G +P F 
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 197 STLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHE 230
            T+   G+ +  + ++TKK+AE+ AA AA  SL +
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRK 155


HSP 2 Score: 41.2 bits (95), Expect = 1.7e-03
Identity = 32/121 (26.45%), Postives = 57/121 (47.11%), Query Frame = 1 

Query: 53  LVLIPSAAPAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRST 112
           L  + S  P+   +  + D T I  YKN L E A +A + +PVY ++  G   +P F  T
Sbjct: 65  LSALSSKGPSKSLTARVLDETGI--YKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFSCT 124

Query: 113 VLLDEVHYVSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTD 172
           V L  + + +  + + ++ AE++AA  A+  + K  + D      ++  +   +LS +  
Sbjct: 125 VELAGMSF-NGESAKTKKQAEKNAAIAAWFSLRKMPRLDPLRGEEKEQEIVARVLSRFRP 182

Query: 173 K 174
           K
Sbjct: 185 K 182

[Close]
BLAST of MELO3C020280 vs. TAIR10
Match: AT2G28380.1 (AT2G28380.1 dsRNA-binding protein 2)

HSP 1 Score: 80.5 bits (197), Expect = 2.5e-15
Identity = 50/155 (32.26%), Postives = 79/155 (50.97%), Query Frame = 1 

Query: 77  VYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHYVSPNTFRNRRAAEQDA 136
           +YKN L E AQ++   +P Y  I EG    P+F++TV  +   + SP      R AE  A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 137 ARIAFEYISKKTKDDAFLL-LREDLILCKSILSEYTDKMGLERPIYTT-KHHKGSVPLFQ 196
           A +A   +S +    +    + ++  + K++L E   ++G   P YTT +   G  P+F 
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 197 STLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHE 230
            T+   G+ +T D ++ KK+AE+ AA AA  SL +
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQ 155

[Close]
BLAST of MELO3C020280 vs. TAIR10
Match: AT5G41070.1 (AT5G41070.1 dsRNA-binding protein 5)

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-13
Identity = 47/153 (30.72%), Postives = 79/153 (51.63%), Query Frame = 1 

Query: 77  VYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHYVSPNTFRNRRAAEQDA 136
           +YKN L E AQ++   +P Y  I EG    P+F+++V  +   + SP      R AE  A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 137 ARIAFEYISKKTKDDAFLL-LREDLILCKSILSEYTDKMGLERPIYTT-KHHKGSVPLFQ 196
           A ++   +S +    +    + ++  + K++L E   + GL+ P+YT+ +      P F 
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 197 STLVFDGVVYTSDLSRTKKEAEQLAARAAILSL 228
            T+   G+ +T + ++TKK+AE+ AA AA  SL
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSL 153


HSP 2 Score: 42.0 bits (97), Expect = 9.9e-04
Identity = 29/100 (29.00%), Postives = 50/100 (50.00%), Query Frame = 1 

Query: 53  LVLIPSAAPAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRST 112
           L ++ S  P+   +  + D T I  YKN L E A +A + +P+Y ++  GS   P F  T
Sbjct: 65  LNVLSSRVPSKSLTAKILDETGI--YKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFSCT 124

Query: 113 VLLDEVHYVSPNTFRNRRAAEQDAARIAFEYISKKTKDDA 153
           V L  + +   +  + ++ AE++AA  A+  + K +  D+
Sbjct: 125 VELAGMTFTGESA-KTKKQAEKNAAIAAWSSLKKMSSLDS 161

[Close]
BLAST of MELO3C020280 vs. NCBI nr
Match: gi|659114468|ref|XP_008457066.1| (PREDICTED: uncharacterized protein LOC103496837 isoform X1 [Cucumis melo])

HSP 1 Score: 760.8 bits (1963), Expect = 1.2e-216
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 1 

Query: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60
           MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120
           PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAINIKSQKTL 240
           YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAINIKSQKTL
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAINIKSQKTL 240

Query: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300
           ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCG
Sbjct: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300

Query: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360
           AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA
Sbjct: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360

Query: 361 RKKLCMENGVATETSQTAAPCSVAQ 386
           RKKLCMENGVATETSQTAAPCSVAQ
Sbjct: 361 RKKLCMENGVATETSQTAAPCSVAQ 385

[Close]
BLAST of MELO3C020280 vs. NCBI nr
Match: gi|659114470|ref|XP_008457067.1| (PREDICTED: double-stranded RNA-binding protein 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 754.2 bits (1946), Expect = 1.1e-214
Identity = 384/385 (99.74%), Postives = 384/385 (99.74%), Query Frame = 1 

Query: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60
           MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120
           PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAINIKSQKTL 240
           YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH DAINIKSQKTL
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH-DAINIKSQKTL 240

Query: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300
           ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCG
Sbjct: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300

Query: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360
           AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA
Sbjct: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360

Query: 361 RKKLCMENGVATETSQTAAPCSVAQ 386
           RKKLCMENGVATETSQTAAPCSVAQ
Sbjct: 361 RKKLCMENGVATETSQTAAPCSVAQ 384

[Close]
BLAST of MELO3C020280 vs. NCBI nr
Match: gi|449464150|ref|XP_004149792.1| (PREDICTED: uncharacterized protein LOC101213863 isoform X1 [Cucumis sativus])

HSP 1 Score: 669.5 bits (1726), Expect = 3.6e-189
Identity = 338/385 (87.79%), Postives = 358/385 (92.99%), Query Frame = 1 

Query: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60
           ME SGTVEAGAPQQSPF SDSVPTVVTPPIPV+N +T Q QP+IHPPSVLPDLV IPSAA
Sbjct: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120
           PAPIPSPNLSD TQIFVYKNHLHEY QKA+IAVPVYQTIDEGSP LPK+RSTV++DEVHY
Sbjct: 61  PAPIPSPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAAR+AFEYISKKTKDDAFLLLREDL+LCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAINIKSQKTL 240
           YTTKH++GSV  FQSTLVFDGVVYTSDL RTKKEAEQLAARAAILSLHEDA N KSQK L
Sbjct: 181 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKAL 240

Query: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300
            DIIASKVRFHAMLQKVKDS+FSQ QPKSMPENTVERVAMTVNE K +KDAV D G+VCG
Sbjct: 241 GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGMVCG 300

Query: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360
           AISEACPTS F+PEFS+TKP+GSSPL+RLPIEFV STLE PVG HAT GSKR+SKNKRKA
Sbjct: 301 AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA 360

Query: 361 RKKLCMENGVATETSQTAAPCSVAQ 386
           RKKLCMEN VATETSQTAAPCSVA+
Sbjct: 361 RKKLCMENRVATETSQTAAPCSVAR 385

[Close]
BLAST of MELO3C020280 vs. NCBI nr
Match: gi|778680845|ref|XP_011651405.1| (PREDICTED: double-stranded RNA-binding protein 4 isoform X2 [Cucumis sativus])

HSP 1 Score: 662.9 bits (1709), Expect = 3.4e-187
Identity = 337/385 (87.53%), Postives = 357/385 (92.73%), Query Frame = 1 

Query: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60
           ME SGTVEAGAPQQSPF SDSVPTVVTPPIPV+N +T Q QP+IHPPSVLPDLV IPSAA
Sbjct: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120
           PAPIPSPNLSD TQIFVYKNHLHEY QKA+IAVPVYQTIDEGSP LPK+RSTV++DEVHY
Sbjct: 61  PAPIPSPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAAR+AFEYISKKTKDDAFLLLREDL+LCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAINIKSQKTL 240
           YTTKH++GSV  FQSTLVFDGVVYTSDL RTKKEAEQLAARAAILSLH DA N KSQK L
Sbjct: 181 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLH-DATNPKSQKAL 240

Query: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300
            DIIASKVRFHAMLQKVKDS+FSQ QPKSMPENTVERVAMTVNE K +KDAV D G+VCG
Sbjct: 241 GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGMVCG 300

Query: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360
           AISEACPTS F+PEFS+TKP+GSSPL+RLPIEFV STLE PVG HAT GSKR+SKNKRKA
Sbjct: 301 AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA 360

Query: 361 RKKLCMENGVATETSQTAAPCSVAQ 386
           RKKLCMEN VATETSQTAAPCSVA+
Sbjct: 361 RKKLCMENRVATETSQTAAPCSVAR 384

[Close]
BLAST of MELO3C020280 vs. NCBI nr
Match: gi|659114472|ref|XP_008457068.1| (PREDICTED: double-stranded RNA-binding protein 4-like isoform X3 [Cucumis melo])

HSP 1 Score: 456.1 bits (1172), Expect = 6.3e-125
Identity = 238/283 (84.10%), Postives = 248/283 (87.63%), Query Frame = 1 

Query: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60
           MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120
           PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAINIKSQKTL 240
           YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH     +   K +
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH-----VNEDKNV 240

Query: 241 ADIIA-SKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTV 283
            D ++ S V   A+ +    S F      + PE +   V + +
Sbjct: 241 KDAVSDSGVVCGAISEACPTSLFRPEFSSTKPEGSSPLVRLPI 278

The following BLAST results are available for this feature:
BLAST of MELO3C020280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DRB4_ORYSJ1.8e-2337.95Double-stranded RNA-binding protein 4 OS=Oryza sativa subsp. japonica GN=DRB4 PE... [more]
DRB3_ORYSJ4.5e-2239.18Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica GN=DRB3 PE... [more]
DRB7_ORYSJ5.8e-2238.25Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica GN=DRB7 PE... [more]
DRB1_ARATH5.8e-2237.72Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana GN=DRB1 PE=1 SV=1[more]
DRB8_ORYSJ1.7e-2137.70Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica GN=DRB8 PE... [more]
BLAST of MELO3C020280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCN7_CUCSA3.2e-10486.03Uncharacterized protein OS=Cucumis sativus GN=Csa_3G345370 PE=4 SV=1[more]
A0A0A0LAZ4_CUCSA1.6e-7489.24Uncharacterized protein OS=Cucumis sativus GN=Csa_3G345380 PE=4 SV=1[more]
D7TSR3_VITVI1.5e-6144.78Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g01440 PE=4 SV=... [more]
A0A0B0MSI8_GOSAR2.1e-5038.24Double-stranded RNA-binding 4 OS=Gossypium arboreum GN=F383_22957 PE=4 SV=1[more]
A0A061EHS9_THECC6.0e-5042.42DsRNA-binding domain-like superfamily protein, putative OS=Theobroma cacao GN=TC... [more]
BLAST of MELO3C020280 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09700.13.3e-2337.72 dsRNA-binding domain-like superfamily protein[more]
AT3G26932.12.5e-1530.97 dsRNA-binding protein 3[more]
AT2G28380.12.5e-1532.26 dsRNA-binding protein 2[more]
AT5G41070.11.4e-1330.72 dsRNA-binding protein 5[more]
BLAST of MELO3C020280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114468|ref|XP_008457066.1|1.2e-216100.00PREDICTED: uncharacterized protein LOC103496837 isoform X1 [Cucumis melo][more]
gi|659114470|ref|XP_008457067.1|1.1e-21499.74PREDICTED: double-stranded RNA-binding protein 4-like isoform X2 [Cucumis melo][more]
gi|449464150|ref|XP_004149792.1|3.6e-18987.79PREDICTED: uncharacterized protein LOC101213863 isoform X1 [Cucumis sativus][more]
gi|778680845|ref|XP_011651405.1|3.4e-18787.53PREDICTED: double-stranded RNA-binding protein 4 isoform X2 [Cucumis sativus][more]
gi|659114472|ref|XP_008457068.1|6.3e-12584.10PREDICTED: double-stranded RNA-binding protein 4-like isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR014720dsRBD_dom
IPR014720dsRBD_dom
IPR014720dsRBD_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0035194 posttranscriptional gene silencing by RNA
biological_process GO:0070918 production of small RNA involved in gene silencing by RNA
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0016075 rRNA catabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003725 double-stranded RNA binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0004525 ribonuclease III activity
molecular_function GO:0003723 RNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU51939melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020280T2MELO3C020280T2mRNA
MELO3C020280T3MELO3C020280T3mRNA
MELO3C020280T1MELO3C020280T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU51939MU51939transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014720Double-stranded RNA-binding domainGENE3DG3DSA:3.30.160.20coord: 78..144
score: 3.5
IPR014720Double-stranded RNA-binding domainPFAMPF00035dsrmcoord: 78..143
score: 5.1
IPR014720Double-stranded RNA-binding domainSMARTSM00358DRBM_3coord: 78..145
score: 2.0
IPR014720Double-stranded RNA-binding domainPROFILEPS50137DS_RBDcoord: 77..146
score: 11
NoneNo IPR availablePANTHERPTHR11207RIBONUCLEASE IIIcoord: 2..156
score: 4.2
NoneNo IPR availablePANTHERPTHR11207:SF8SUBFAMILY NOT NAMEDcoord: 2..156
score: 4.2
NoneNo IPR availableunknownSSF54768dsRNA-binding domain-likecoord: 72..145
score: 1.32