MELO3C018592 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C018592
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionConserved peptide upstream open reading frame 37
Locationchr1 : 1329252 .. 1329527 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTGCCAAGCAGCGAGTCAAACACGATTTCGGGCATTGAAACATGAAAATGGGATTGCTGGGAAGCCAACAATTATTGTTAAAGTGATAGCATGTTTTCAACCTTTGCAGAATTGCCAGGTATCCACAGCTTGGTTTCTAAACCCTATAAATGGTCAATTAATTTCGGTACTGAATATCATTGACTCCTGGAACTATATGGTTAACCTTCCTGTGGAATTTTTTTTTTAACAGGCTGAGTACTTCCGTCATTTGCTCAAACCTGTCACGTAG

mRNA sequence

ATGGTGTGCCAAGCAGCGAGTCAAACACGATTTCGGGCATTGAAACATGAAAATGGGATTGCTGGGAAGCCAACAATTATTGTTAAAGTGATAGCATGTTTTCAACCTTTGCAGAATTGCCAGGCTGAGTACTTCCGTCATTTGCTCAAACCTGTCACGTAG

Coding sequence (CDS)

ATGGTGTGCCAAGCAGCGAGTCAAACACGATTTCGGGCATTGAAACATGAAAATGGGATTGCTGGGAAGCCAACAATTATTGTTAAAGTGATAGCATGTTTTCAACCTTTGCAGAATTGCCAGGCTGAGTACTTCCGTCATTTGCTCAAACCTGTCACGTAG

Protein sequence

MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT*
Homology
[Close]
BLAST of MELO3C018592 vs. TrEMBL
Match: A0A0A0K458_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066260 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.2e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 53

[Close]
BLAST of MELO3C018592 vs. TrEMBL
Match: W9R7U4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011398 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.8e-21
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAASQTRFRALKHENGIAGKPTIIV+VIACFQPLQ+CQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]
BLAST of MELO3C018592 vs. TrEMBL
Match: A0A0B0MJS2_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_26115 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 9.1e-21
Identity = 48/53 (90.57%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAASQTRFRALKHENGIAGKPTI+V+VIACFQP+++CQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPMEDCQAEYFRHLLKPVT 53

[Close]
BLAST of MELO3C018592 vs. TrEMBL
Match: A0A0D2RD15_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G224400 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 9.1e-21
Identity = 48/53 (90.57%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAASQTRFRALKHENGIAGKPTI+V+VIACFQP+++CQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPMEDCQAEYFRHLLKPVT 53

[Close]
BLAST of MELO3C018592 vs. TrEMBL
Match: A0A0A0KVT2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G113180 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.6e-20
Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 1 

Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAA+QTRFRALKHENGIAGKPTIIV+VIACFQPLQNCQA+YFR LLKPVT
Sbjct: 1  MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAKYFRQLLKPVT 53

[Close]
BLAST of MELO3C018592 vs. TAIR10
Match: AT5G50011.1 (AT5G50011.1 conserved peptide upstream open reading frame 37)

HSP 1 Score: 86.3 bits (212), Expect = 6.4e-18
Identity = 41/53 (77.36%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQ+A QTRFR LKHE+GI G   I+V+VIACFQPLQ+CQAEYFR LLKPVT
Sbjct: 1  MVCQSAGQTRFRTLKHEHGITGN--IVVRVIACFQPLQDCQAEYFRQLLKPVT 51

[Close]
BLAST of MELO3C018592 vs. TAIR10
Match: AT5G09461.1 (AT5G09461.1 conserved peptide upstream open reading frame 43)

HSP 1 Score: 83.2 bits (204), Expect = 5.4e-17
Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 1 

Query: 1  MVCQAASQTRFRALKHEN-GIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MV Q+A QTRFR  K+EN G + +PTI+V+VIACFQP+ NCQAEYFRH+LKPVT
Sbjct: 1  MVSQSAGQTRFRTFKYENNGDSSRPTIVVRVIACFQPMDNCQAEYFRHILKPVT 54

[Close]
BLAST of MELO3C018592 vs. TAIR10
Match: AT5G64341.1 (AT5G64341.1 conserved peptide upstream open reading frame 40)

HSP 1 Score: 78.6 bits (192), Expect = 1.3e-15
Identity = 35/53 (66.04%), Postives = 41/53 (77.36%), Query Frame = 1 

Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQ+  +TRFR LK+E G A + TI+V+VI C+QP+ NCQAEYFR LLKPVT
Sbjct: 1  MVCQSPGKTRFRGLKYETGNANESTIVVRVIECYQPMDNCQAEYFRLLLKPVT 53

[Close]
BLAST of MELO3C018592 vs. NCBI nr
Match: gi|700188536|gb|KGN43769.1| (hypothetical protein Csa_7G066260 [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 3.1e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 53

[Close]
BLAST of MELO3C018592 vs. NCBI nr
Match: gi|703093100|ref|XP_010094825.1| (hypothetical protein L484_011398 [Morus notabilis])

HSP 1 Score: 109.0 bits (271), Expect = 2.6e-21
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAASQTRFRALKHENGIAGKPTIIV+VIACFQPLQ+CQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]
BLAST of MELO3C018592 vs. NCBI nr
Match: gi|728817163|gb|KHG02368.1| (hypothetical protein F383_26115 [Gossypium arboreum])

HSP 1 Score: 106.7 bits (265), Expect = 1.3e-20
Identity = 48/53 (90.57%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAASQTRFRALKHENGIAGKPTI+V+VIACFQP+++CQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPMEDCQAEYFRHLLKPVT 53

[Close]
BLAST of MELO3C018592 vs. NCBI nr
Match: gi|763760272|gb|KJB27526.1| (hypothetical protein B456_005G224400 [Gossypium raimondii])

HSP 1 Score: 106.7 bits (265), Expect = 1.3e-20
Identity = 48/53 (90.57%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAASQTRFRALKHENGIAGKPTI+V+VIACFQP+++CQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPMEDCQAEYFRHLLKPVT 53

[Close]
BLAST of MELO3C018592 vs. NCBI nr
Match: gi|700198577|gb|KGN53735.1| (hypothetical protein Csa_4G113180 [Cucumis sativus])

HSP 1 Score: 105.1 bits (261), Expect = 3.8e-20
Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 1 

Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAA+QTRFRALKHENGIAGKPTIIV+VIACFQPLQNCQA+YFR LLKPVT
Sbjct: 1  MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAKYFRQLLKPVT 53

The following BLAST results are available for this feature:
BLAST of MELO3C018592 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K458_CUCSA2.2e-22100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066260 PE=4 SV=1[more]
W9R7U4_9ROSA1.8e-2196.23Uncharacterized protein OS=Morus notabilis GN=L484_011398 PE=4 SV=1[more]
A0A0B0MJS2_GOSAR9.1e-2190.57Uncharacterized protein OS=Gossypium arboreum GN=F383_26115 PE=4 SV=1[more]
A0A0D2RD15_GOSRA9.1e-2190.57Uncharacterized protein OS=Gossypium raimondii GN=B456_005G224400 PE=4 SV=1[more]
A0A0A0KVT2_CUCSA2.6e-2092.45Uncharacterized protein OS=Cucumis sativus GN=Csa_4G113180 PE=4 SV=1[more]
BLAST of MELO3C018592 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G50011.16.4e-1877.36 conserved peptide upstream open reading frame 37[more]
AT5G09461.15.4e-1770.37 conserved peptide upstream open reading frame 43[more]
AT5G64341.11.3e-1566.04 conserved peptide upstream open reading frame 40[more]
BLAST of MELO3C018592 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188536|gb|KGN43769.1|3.1e-22100.00hypothetical protein Csa_7G066260 [Cucumis sativus][more]
gi|703093100|ref|XP_010094825.1|2.6e-2196.23hypothetical protein L484_011398 [Morus notabilis][more]
gi|728817163|gb|KHG02368.1|1.3e-2090.57hypothetical protein F383_26115 [Gossypium arboreum][more]
gi|763760272|gb|KJB27526.1|1.3e-2090.57hypothetical protein B456_005G224400 [Gossypium raimondii][more]
gi|700198577|gb|KGN53735.1|3.8e-2092.45hypothetical protein Csa_4G113180 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU50910melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018592T1MELO3C018592T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU50910MU50910transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35281FAMILY NOT NAMEDcoord: 2..53
score: 1.3
NoneNo IPR availablePANTHERPTHR35281:SF1CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATEDcoord: 2..53
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C018592Csa7G066260Cucumber (Chinese Long) v2cumeB530
MELO3C018592Cla001297Watermelon (97103) v1mewmB217
MELO3C018592ClCG09G015900Watermelon (Charleston Gray)mewcgB176
MELO3C018592Cla97C10G192610Watermelon (97103) v2mewmbB174
MELO3C018592Bhi11G000860Wax gourdmewgoB198
MELO3C018592Bhi05G000746Wax gourdmewgoB219
MELO3C018592CmoCh11G014760Cucurbita moschata (Rifu)cmomeB094
MELO3C018592CmoCh04G004230Cucurbita moschata (Rifu)cmomeB665
MELO3C018592Lsi03G007250Bottle gourd (USVL1VR-Ls)lsimeB250
MELO3C018592CsGy7G005720Cucumber (Gy14) v2cgybmeB468
MELO3C018592Carg08072Silver-seed gourdcarmeB0378
MELO3C018592CsaV3_7G007020Cucumber (Chinese Long) v3cucmeB548
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018592Silver-seed gourdcarmeB0289
MELO3C018592Silver-seed gourdcarmeB0290
MELO3C018592Silver-seed gourdcarmeB0726
MELO3C018592Watermelon (97103) v2mewmbB224
MELO3C018592Wax gourdmewgoB220
MELO3C018592Melon (DHL92) v3.5.1memeB094
MELO3C018592Cucumber (Gy14) v1cgymeB379
MELO3C018592Cucurbita maxima (Rimu)cmameB096
MELO3C018592Cucurbita maxima (Rimu)cmameB098
MELO3C018592Cucurbita maxima (Rimu)cmameB457
MELO3C018592Cucurbita maxima (Rimu)cmameB463
MELO3C018592Cucurbita moschata (Rifu)cmomeB085
MELO3C018592Cucurbita moschata (Rifu)cmomeB449
MELO3C018592Cucurbita moschata (Rifu)cmomeB454
MELO3C018592Wild cucumber (PI 183967)cpimeB538
MELO3C018592Watermelon (97103) v1mewmB207
MELO3C018592Cucurbita pepo (Zucchini)cpemeB220
MELO3C018592Cucurbita pepo (Zucchini)cpemeB604
MELO3C018592Cucurbita pepo (Zucchini)cpemeB613
MELO3C018592Bottle gourd (USVL1VR-Ls)lsimeB247