Bhi05G000746 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi05G000746
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	conserved peptide upstream open reading frame 37
Location	chr5 : 31724639 .. 31724987 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCTTCTGTCTCACATCATTTTCATCCTTCAGCATAGTAAAGGGTTAAAAGTAGTTATGGTGTGCCAAGCAGCGAGTCAAACACGATTTCGGGCTTTGAAACATGAAAATGGTATTGCAGGGAAGCCAACAATTATTGTTAGAGTGATTGCATGTTTTCAACCTTTGCAGAATTGCCAGGTATACACAGCTTGATTTCTTAACTCTTCGATTTCTCTGTGTTTTATATTCATGGTCAATTAATTTGTCACTGAAGATCATCGACTCCTAGAACTATATGGTTAACGTTGCTGTGGTTTTTTTTCTTCAGGCTGAGTACTTCCGTCATTTGCTCAAACCTGTCACGTAG

mRNA sequence

GCCCTTCTGTCTCACATCATTTTCATCCTTCAGCATAGTAAAGGGTTAAAAGTAGTTATGGTGTGCCAAGCAGCGAGTCAAACACGATTTCGGGCTTTGAAACATGAAAATGGTATTGCAGGGAAGCCAACAATTATTGTTAGAGTGATTGCATGTTTTCAACCTTTGCAGAATTGCCAGGCTGAGTACTTCCGTCATTTGCTCAAACCTGTCACGTAG

Coding sequence (CDS)

GCCCTTCTGTCTCACATCATTTTCATCCTTCAGCATAGTAAAGGGTTAAAAGTAGTTATGGTGTGCCAAGCAGCGAGTCAAACACGATTTCGGGCTTTGAAACATGAAAATGGTATTGCAGGGAAGCCAACAATTATTGTTAGAGTGATTGCATGTTTTCAACCTTTGCAGAATTGCCAGGCTGAGTACTTCCGTCATTTGCTCAAACCTGTCACGTAG

Protein sequence

ALLSHIIFILQHSKGLKVVMVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

Homology

[Close]

BLAST of Bhi05G000746 vs. TAIR10
Match: AT5G50011.1 (conserved peptide upstream open reading frame 37)

HSP 1 Score: 89.7 bits (221), Expect = 7.7e-19
Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 20 MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
          MVCQ+A QTRFR LKHE+GI G   I+VRVIACFQPLQ+CQAEYFR LLKPVT
Sbjct: 1  MVCQSAGQTRFRTLKHEHGITG--NIVVRVIACFQPLQDCQAEYFRQLLKPVT 51

[Close]

BLAST of Bhi05G000746 vs. TAIR10
Match: AT5G09461.1 (conserved peptide upstream open reading frame 43)

HSP 1 Score: 87.0 bits (214), Expect = 5.0e-18
Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = 0


Query: 20 MVCQAASQTRFRALKHE-NGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
          MV Q+A QTRFR  K+E NG + +PTI+VRVIACFQP+ NCQAEYFRH+LKPVT
Sbjct: 1  MVSQSAGQTRFRTFKYENNGDSSRPTIVVRVIACFQPMDNCQAEYFRHILKPVT 54

[Close]

BLAST of Bhi05G000746 vs. TAIR10
Match: AT5G64341.1 (conserved peptide upstream open reading frame 40)

HSP 1 Score: 82.4 bits (202), Expect = 1.2e-16
Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 20 MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
          MVCQ+  +TRFR LK+E G A + TI+VRVI C+QP+ NCQAEYFR LLKPVT
Sbjct: 1  MVCQSPGKTRFRGLKYETGNANESTIVVRVIECYQPMDNCQAEYFRLLLKPVT 53

[Close]

BLAST of Bhi05G000746 vs. TrEMBL
Match: tr|A0A1S4E0J3|A0A1S4E0J3_CUCME (uncharacterized protein LOC103495379 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495379 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.8e-22
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 20 MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
          MVCQAASQTRFRALKHENGIAGKPTIIV+VIACFQPLQNCQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 53

[Close]

BLAST of Bhi05G000746 vs. TrEMBL
Match: tr|A0A0A0K458|A0A0A0K458_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066260 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.8e-22
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 20 MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
          MVCQAASQTRFRALKHENGIAGKPTIIV+VIACFQPLQNCQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 53

[Close]

BLAST of Bhi05G000746 vs. TrEMBL
Match: tr|W9R7U4|W9R7U4_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011398 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.1e-22
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 20 MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
          MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQ+CQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of Bhi05G000746 vs. TrEMBL
Match: tr|A0A2P5EP76|A0A2P5EP76_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_168420 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.9e-22
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 20 MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
          MVCQAASQTRFRALKHENGIAG+PTIIVRVIACFQPLQ+CQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGRPTIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of Bhi05G000746 vs. TrEMBL
Match: tr|A0A2P5AUS4|A0A2P5AUS4_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_298860 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.9e-22
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 20 MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
          MVCQAASQTRFRALKHENGIAG+PTIIVRVIACFQPLQ+CQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGRPTIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of Bhi05G000746 vs. NCBI nr
Match: XP_016901746.1 (PREDICTED: uncharacterized protein LOC103495379 isoform X2 [Cucumis melo] >KGN43769.1 hypothetical protein Csa_7G066260 [Cucumis sativus])

HSP 1 Score: 113.6 bits (283), Expect = 2.8e-22
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 20 MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
          MVCQAASQTRFRALKHENGIAGKPTIIV+VIACFQPLQNCQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 53

[Close]

BLAST of Bhi05G000746 vs. NCBI nr
Match: EXB57311.1 (hypothetical protein L484_011398 [Morus notabilis])

HSP 1 Score: 112.8 bits (281), Expect = 4.7e-22
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 20 MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
          MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQ+CQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of Bhi05G000746 vs. NCBI nr
Match: PON40251.1 (hypothetical protein PanWU01x14_298860 [Parasponia andersonii] >PON87350.1 hypothetical protein TorRG33x02_168420 [Trema orientalis])

HSP 1 Score: 111.7 bits (278), Expect = 1.0e-21
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 20 MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
          MVCQAASQTRFRALKHENGIAG+PTIIVRVIACFQPLQ+CQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGRPTIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of Bhi05G000746 vs. NCBI nr
Match: XP_022763666.1 (uncharacterized protein LOC111309083 [Durio zibethinus])

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-21
Identity = 50/56 (89.29%), Postives = 55/56 (98.21%), Query Frame = 0


Query: 17  KVVMVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
           KVVMVCQAA QTRFRALK+ENGIAGKPTI+VRVIACFQP+++CQAEYFRHLLKPVT
Sbjct: 73  KVVMVCQAAGQTRFRALKYENGIAGKPTIVVRVIACFQPMEDCQAEYFRHLLKPVT 128

[Close]

BLAST of Bhi05G000746 vs. NCBI nr
Match: KHG02368.1 (hypothetical protein F383_26115 [Gossypium arboreum])

HSP 1 Score: 110.5 bits (275), Expect = 2.3e-21
Identity = 49/53 (92.45%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 20 MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
          MVCQAASQTRFRALKHENGIAGKPTI+VRVIACFQP+++CQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPMEDCQAEYFRHLLKPVT 53

The following BLAST results are available for this feature:

BLAST of Bhi05G000746 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi05G000746 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G50011.1	7.7e-19	79.25	conserved peptide upstream open reading frame 37	[more]
AT5G09461.1	5.0e-18	72.22	conserved peptide upstream open reading frame 43	[more]
AT5G64341.1	1.2e-16	67.92	conserved peptide upstream open reading frame 40	[more]

BLAST of Bhi05G000746 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E0J3\|A0A1S4E0J3_CUCME	1.8e-22	98.11	uncharacterized protein LOC103495379 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0K458\|A0A0A0K458_CUCSA	1.8e-22	98.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066260 PE=4 SV=1	[more]
tr\|W9R7U4\|W9R7U4_9ROSA	3.1e-22	98.11	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011398 PE=4 SV=1	[more]
tr\|A0A2P5EP76\|A0A2P5EP76_9ROSA	6.9e-22	96.23	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_168420 PE=4 S...	[more]
tr\|A0A2P5AUS4\|A0A2P5AUS4_PARAD	6.9e-22	96.23	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_298860 PE...	[more]

BLAST of Bhi05G000746 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901746.1	2.8e-22	98.11	PREDICTED: uncharacterized protein LOC103495379 isoform X2 [Cucumis melo] >KGN43...	[more]
EXB57311.1	4.7e-22	98.11	hypothetical protein L484_011398 [Morus notabilis]	[more]
PON40251.1	1.0e-21	96.23	hypothetical protein PanWU01x14_298860 [Parasponia andersonii] >PON87350.1 hypot...	[more]
XP_022763666.1	1.4e-21	89.29	uncharacterized protein LOC111309083 [Durio zibethinus]	[more]
KHG02368.1	2.3e-21	92.45	hypothetical protein F383_26115 [Gossypium arboreum]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M000746	Bhi05M000746	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35281:SF1	CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED	coord: 20..72
None	No IPR available	PANTHER	PTHR35281	FAMILY NOT NAMED	coord: 20..72

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi05G000746	Csa7G066260	Cucumber (Chinese Long) v2	cuwgoB675
Bhi05G000746	MELO3C018592	Melon (DHL92) v3.5.1	mewgoB219
Bhi05G000746	ClCG09G015900	Watermelon (Charleston Gray)	wcgwgoB050
Bhi05G000746	CmoCh11G014760	Cucurbita moschata (Rifu)	cmowgoB0118
Bhi05G000746	Lsi03G007250	Bottle gourd (USVL1VR-Ls)	lsiwgoB320
Bhi05G000746	CsGy7G005720	Cucumber (Gy14) v2	cgybwgoB646
Bhi05G000746	CsaV3_7G007020	Cucumber (Chinese Long) v3	cucwgoB700

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi05G000746	Cucumber (Gy14) v1	cgywgoB445
Bhi05G000746	Cucumber (Gy14) v1	cgywgoB451
Bhi05G000746	Cucumber (Gy14) v2	cgybwgoB632
Bhi05G000746	Cucurbita maxima (Rimu)	cmawgoB0116
Bhi05G000746	Cucurbita maxima (Rimu)	cmawgoB0642
Bhi05G000746	Cucurbita moschata (Rifu)	cmowgoB0642
Bhi05G000746	Cucurbita pepo (Zucchini)	cpewgoB0317
Bhi05G000746	Wild cucumber (PI 183967)	cpiwgoB672
Bhi05G000746	Wild cucumber (PI 183967)	cpiwgoB686
Bhi05G000746	Cucumber (Chinese Long) v3	cucwgoB686
Bhi05G000746	Cucumber (Chinese Long) v2	cuwgoB661
Bhi05G000746	Melon (DHL92) v3.6.1	medwgoB219
Bhi05G000746	Melon (DHL92) v3.6.1	medwgoB220
Bhi05G000746	Melon (DHL92) v3.6.1	medwgoB320
Bhi05G000746	Melon (DHL92) v3.5.1	mewgoB220
Bhi05G000746	Melon (DHL92) v3.5.1	mewgoB321
Bhi05G000746	Watermelon (Charleston Gray)	wcgwgoB033
Bhi05G000746	Watermelon (97103) v2	wgowmbB263
Bhi05G000746	Watermelon (97103) v2	wgowmbB279
Bhi05G000746	Watermelon (97103) v1	wgowmB243
Bhi05G000746	Watermelon (97103) v1	wgowmB261
Bhi05G000746	Silver-seed gourd	carwgoB0377