MELO3C018021 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C018021
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionThymocyte nuclear protein 1
Locationchr7 : 26483050 .. 26483670 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTGTGTATAAATAAATGAGGAGGGCCATCAATTTAGGCGCCAATATAACCACCATTTTCCCGCCGGTAACTTCACCGACGTCAACATCTCTTCTTCCTCTCCCACTTAACCGTCACAAGCGGAACGCAGTCATTCGTTCGGAGAAAACAATGGCCAACCCCGTCGCCGGAGACAAAAGGCAGTATTGGCTTCTCAAGACGGAGCCGGCAGAGTGGTCATGGGCGGACCAAGCCGCCAACGACGGACGATCAAAGTGGGACGGCGTTAAGAACAAGCAAGCTCAGAAGCATCTTAAGTCCATGAAACTCGGCGACCGCTGTTTCTTCTACCACTCGGGCGCCAAGGCCCGCCGTGTCGTGGGCGTGGTCGCGGTCGCAAGGGAGTGGTACTCATCGGTGGAGGATGAAGTTGTCGTGGACGTGGAGGCAGTTGGAGAGATGAGGGAACCGGTGGATTTGAAAGAGATGAAGAAGGGGATGGAAGGGATGAAGAATTTCGCTCTGTTTAGGCAACCGAGGCTGTCGGTCGTGCCGGTTGCGAAGGAGATTTGGGATAAAATCTGCGAATTGGGAGGCGGATTTGAAGGAGATGGAACTGAGGGCGGGCATGGGAGTGATTGA

mRNA sequence

ACTGTGTATAAATAAATGAGGAGGGCCATCAATTTAGGCGCCAATATAACCACCATTTTCCCGCCGGTAACTTCACCGACGTCAACATCTCTTCTTCCTCTCCCACTTAACCGTCACAAGCGGAACGCAGTCATTCGTTCGGAGAAAACAATGGCCAACCCCGTCGCCGGAGACAAAAGGCAGTATTGGCTTCTCAAGACGGAGCCGGCAGAGTGGTCATGGGCGGACCAAGCCGCCAACGACGGACGATCAAAGTGGGACGGCGTTAAGAACAAGCAAGCTCAGAAGCATCTTAAGTCCATGAAACTCGGCGACCGCTGTTTCTTCTACCACTCGGGCGCCAAGGCCCGCCGTGTCGTGGGCGTGGTCGCGGTCGCAAGGGAGTGGTACTCATCGGTGGAGGATGAAGTTGTCGTGGACGTGGAGGCAGTTGGAGAGATGAGGGAACCGGTGGATTTGAAAGAGATGAAGAAGGGGATGGAAGGGATGAAGAATTTCGCTCTGTTTAGGCAACCGAGGCTGTCGGTCGTGCCGGTTGCGAAGGAGATTTGGGATAAAATCTGCGAATTGGGAGGCGGATTTGAAGGAGATGGAACTGAGGGCGGGCATGGGAGTGATTGA

Coding sequence (CDS)

ATGAGGAGGGCCATCAATTTAGGCGCCAATATAACCACCATTTTCCCGCCGGTAACTTCACCGACGTCAACATCTCTTCTTCCTCTCCCACTTAACCGTCACAAGCGGAACGCAGTCATTCGTTCGGAGAAAACAATGGCCAACCCCGTCGCCGGAGACAAAAGGCAGTATTGGCTTCTCAAGACGGAGCCGGCAGAGTGGTCATGGGCGGACCAAGCCGCCAACGACGGACGATCAAAGTGGGACGGCGTTAAGAACAAGCAAGCTCAGAAGCATCTTAAGTCCATGAAACTCGGCGACCGCTGTTTCTTCTACCACTCGGGCGCCAAGGCCCGCCGTGTCGTGGGCGTGGTCGCGGTCGCAAGGGAGTGGTACTCATCGGTGGAGGATGAAGTTGTCGTGGACGTGGAGGCAGTTGGAGAGATGAGGGAACCGGTGGATTTGAAAGAGATGAAGAAGGGGATGGAAGGGATGAAGAATTTCGCTCTGTTTAGGCAACCGAGGCTGTCGGTCGTGCCGGTTGCGAAGGAGATTTGGGATAAAATCTGCGAATTGGGAGGCGGATTTGAAGGAGATGGAACTGAGGGCGGGCATGGGAGTGATTGA

Protein sequence

MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSD*
Homology
[Close]
BLAST of MELO3C018021 vs. Swiss-Prot
Match: THYN1_MOUSE (Thymocyte nuclear protein 1 OS=Mus musculus GN=Thyn1 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.0e-13
Identity = 57/164 (34.76%), Postives = 83/164 (50.61%), Query Frame = 1 

Query: 57  YWLLKTEPA---------EWSWADQAANDGRSK-WDGVKNKQAQKHLKSMKLGDRCFFYH 116
           YWL+K+EP          ++S  D  A   ++  WDGV+N QA+  L++MKL D  FFYH
Sbjct: 57  YWLMKSEPESRLEKGIDMKFSIEDLKAQPKQTACWDGVRNYQARNFLRAMKLEDEAFFYH 116

Query: 117 SGAKARRVVGVVAVAREWY---------------SSVEDE---VVVDVEAVGEMREPVDL 176
           S  K   +VG++ + +E Y               SS ED+    +VDV+ V  M+  + L
Sbjct: 117 SNCKQPGIVGLMKIVKEAYPDHTQFEKSNPHYDPSSKEDDPKWSMVDVQFVRMMKRFIPL 176

Query: 177 KEMK------KGMEG-MKNFALFRQPRLSVVPVAKEIWDKICEL 186
           +E+K      K   G +K+  LF + RLSV P+ +E +D I  L
Sbjct: 177 EELKTYHQAHKATGGPLKSMTLFTRQRLSVQPLTQEEFDFILSL 220

[Close]
BLAST of MELO3C018021 vs. Swiss-Prot
Match: THYN1_RAT (Thymocyte nuclear protein 1 OS=Rattus norvegicus GN=Thyn1 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.4e-13
Identity = 62/179 (34.64%), Postives = 84/179 (46.93%), Query Frame = 1 

Query: 43  EKTMANPVAGDK-RQYWLLKTEPA---------EWSWAD-QAANDGRSKWDGVKNKQAQK 102
           EKT      G     YWL+K+EP          ++S  D QA     + WDGV+N QA  
Sbjct: 42  EKTTTFKTCGKNLSNYWLMKSEPESRLEKGIDMKFSIEDLQAQPKQTTCWDGVRNYQAWN 101

Query: 103 HLKSMKLGDRCFFYHSGAKARRVVGVVAVAREWY---------------SSVEDE---VV 162
            L++MKL D  FFYHS  K   +VG++ + +E Y               SS ED     +
Sbjct: 102 FLRAMKLEDEAFFYHSNCKQPGIVGLMKIVKEAYPDHTQFEKNDPHYDPSSKEDNPKWSM 161

Query: 163 VDVEAVGEMREPVDLKEMK------KGMEG-MKNFALFRQPRLSVVPVAKEIWDKICEL 186
           VDV+ V  M+  + L E+K      K   G +K+  LF + RLSV P+ +E +D I  L
Sbjct: 162 VDVQFVRMMKRFISLDELKTYHQAHKATGGPLKSMTLFTRQRLSVQPLTQEEFDFILSL 220

[Close]
BLAST of MELO3C018021 vs. Swiss-Prot
Match: THYN1_HUMAN (Thymocyte nuclear protein 1 OS=Homo sapiens GN=THYN1 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.5e-13
Identity = 54/164 (32.93%), Postives = 81/164 (49.39%), Query Frame = 1 

Query: 57  YWLLKTEP---------AEWSWADQAANDGRSK-WDGVKNKQAQKHLKSMKLGDRCFFYH 116
           +WL+K+EP          ++S  D  A   ++  WDGV+N QA+  L++MKLG+  FFYH
Sbjct: 56  HWLMKSEPESRLEKGVDVKFSIEDLKAQPKQTTCWDGVRNYQARNFLRAMKLGEEAFFYH 115

Query: 117 SGAKARRVVGVVAVAREWY---------------SSVEDE---VVVDVEAVGEMREPVDL 176
           S  K   + G++ + +E Y               SS ED     +VDV+ V  M+  + L
Sbjct: 116 SNCKEPGIAGLMKIVKEAYPDHTQFEKNNPHYDPSSKEDNPKWSMVDVQFVRMMKRFIPL 175

Query: 177 KEMK------KGMEG-MKNFALFRQPRLSVVPVAKEIWDKICEL 186
            E+K      K   G +KN  LF + RLS+ P+ +E +D +  L
Sbjct: 176 AELKSYHQAHKATGGPLKNMVLFTRQRLSIQPLTQEEFDFVLSL 219

[Close]
BLAST of MELO3C018021 vs. Swiss-Prot
Match: THYN1_CHICK (Thymocyte nuclear protein 1 OS=Gallus gallus GN=THYN1 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.4e-12
Identity = 54/164 (32.93%), Postives = 80/164 (48.78%), Query Frame = 1 

Query: 57  YWLLKTEP---------AEWSWADQAANDGRSK-WDGVKNKQAQKHLKSMKLGDRCFFYH 116
           +WLLK+EP          ++S  D  A   ++  W+GV+N QA+  L++MKLG + FFYH
Sbjct: 73  HWLLKSEPESRLEKGVDVKFSIEDLKAQPNQTTFWEGVRNYQARNFLRAMKLGQQAFFYH 132

Query: 117 SGAKARRVVGVVAVAREWY--------------SSVEDE----VVVDVEAVGEMREPVDL 176
           S  K   +VG+V + +E Y              SS   E     +VDV+ V   +  + L
Sbjct: 133 SNCKEPGIVGIVKIVKEAYPDHTQFDQKDPHYDSSSRKENPKWSMVDVQFVRMTKRFIPL 192

Query: 177 KEMK------KGMEG-MKNFALFRQPRLSVVPVAKEIWDKICEL 186
            E+K      K   G +KN  LF + RLS+ P+ +E +D +  L
Sbjct: 193 SEIKTHHLAHKADGGPLKNMMLFSRQRLSIQPLTQEEFDFVLSL 236

[Close]
BLAST of MELO3C018021 vs. Swiss-Prot
Match: THYN1_DANRE (Thymocyte nuclear protein 1 OS=Danio rerio GN=thyn1 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.7e-10
Identity = 54/190 (28.42%), Postives = 89/190 (46.84%), Query Frame = 1 

Query: 33  RHKRNAVIRSEKTMANPVAGDKRQY--WLLKTEP---------AEWSWADQAANDGRSK- 92
           + KR+A ++ +    N     K  Y  WL+K+EP          ++   D  A   ++  
Sbjct: 36  KRKRSAAVKGDVENKNDDDACKPSYSRWLMKSEPESRIENGVDVKFGIEDLKALPNQTGC 95

Query: 93  WDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAVAREWY--------------- 152
           WDGV+N QA+  ++ MK+G + FFYHS  K   + G++ + +E Y               
Sbjct: 96  WDGVRNYQARNFMREMKVGQQAFFYHSNCKEPGIAGLMKIVKEAYVDHTQFDKKDVHYDP 155

Query: 153 SSVEDEV---VVDVEAVGEMREPVDLKEMKK-----GMEG--MKNFALFRQPRLSVVPVA 186
           SS  D     +VDV+    ++  + L E+KK      ++G  +K+ ALF + RLSV P+ 
Sbjct: 156 SSKADNPKWHMVDVQFERMVKRFIPLAELKKYHLEHRVKGGPLKDMALFTRARLSVQPLT 215

[Close]
BLAST of MELO3C018021 vs. TrEMBL
Match: E5GBH2_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 9.9e-113
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 

Query: 1   MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLL 60
           MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLL
Sbjct: 1   MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLL 60

Query: 61  KTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAV 120
           KTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAV
Sbjct: 61  KTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAV 120

Query: 121 AREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWD 180
           AREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWD
Sbjct: 121 AREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWD 180

Query: 181 KICELGGGFEGDGTEGGHGSD 202
           KICELGGGFEGDGTEGGHGSD
Sbjct: 181 KICELGGGFEGDGTEGGHGSD 201

[Close]
BLAST of MELO3C018021 vs. TrEMBL
Match: A0A0A0KWC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000630 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.2e-97
Identity = 180/202 (89.11%), Postives = 187/202 (92.57%), Query Frame = 1 

Query: 1   MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKR-NAVIRSEKTMANPVAGDKRQYWL 60
           MRRA+ LG NITTIFP    P+  SLLPLPLN HK+ +AVIRSEKTMAN VAGDKRQYWL
Sbjct: 1   MRRAMYLGGNITTIFPLEILPSLPSLLPLPLNHHKQISAVIRSEKTMANAVAGDKRQYWL 60

Query: 61  LKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA 120
           LKTEPAEWSWADQAANDGR+ WDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA
Sbjct: 61  LKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA 120

Query: 121 VAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIW 180
           VAREWYSSV+DEVVVDVEAVGEMREPVDLKEMKK MEGMKNFALFRQPRLSVVPV KEIW
Sbjct: 121 VAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSVVPVTKEIW 180

Query: 181 DKICELGGGFEGDGTEGGHGSD 202
           DKICELGGGFEGDGTEGG GS+
Sbjct: 181 DKICELGGGFEGDGTEGGDGSE 202

[Close]
BLAST of MELO3C018021 vs. TrEMBL
Match: M5VHY7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb017205mg PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-58
Identity = 112/151 (74.17%), Postives = 129/151 (85.43%), Query Frame = 1 

Query: 52  GDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKA 111
           G+++ YWLLKTEP EWSW DQAAN G +KWDGVKNKQAQK+LKSMKLGD CFFYHSGAKA
Sbjct: 2   GEEKHYWLLKTEPGEWSWEDQAANGGVTKWDGVKNKQAQKNLKSMKLGDLCFFYHSGAKA 61

Query: 112 RRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSV 171
           RRVVGVVAV REWYS   D+ VVDV+AVGEMR PVDLKEM KG +G+K FALFRQPRLSV
Sbjct: 62  RRVVGVVAVVREWYSDGGDDGVVDVKAVGEMRRPVDLKEM-KGEKGLKGFALFRQPRLSV 121

Query: 172 VPVAKEIWDKICELGGGFEGDGTE-GGHGSD 202
           VPV +++W ++C+LGGG++GDGT    H SD
Sbjct: 122 VPVPEDVWIRVCDLGGGYQGDGTVLESHDSD 151

[Close]
BLAST of MELO3C018021 vs. TrEMBL
Match: B9S802_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1383260 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.1e-58
Identity = 107/150 (71.33%), Postives = 126/150 (84.00%), Query Frame = 1 

Query: 52  GDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKA 111
           G ++QYWLLKTEP EWSW DQA+N G + WDGVKNKQAQK+LK+M + D CFFYHSGAKA
Sbjct: 2   GKEKQYWLLKTEPGEWSWDDQASNGGITNWDGVKNKQAQKNLKAMNIKDLCFFYHSGAKA 61

Query: 112 RRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSV 171
           RRVVGVVAV +EWYS+ +DEVVVDV+AVGEMR PVDLKEMK   +G+ +FALFRQPRLSV
Sbjct: 62  RRVVGVVAVVKEWYSNDDDEVVVDVKAVGEMRRPVDLKEMKND-DGLSDFALFRQPRLSV 121

Query: 172 VPVAKEIWDKICELGGGFEGDGTEGGHGSD 202
           VPV KE+W+++CELG GFEGDG +     D
Sbjct: 122 VPVPKEVWERVCELGDGFEGDGNDDNQEQD 150

[Close]
BLAST of MELO3C018021 vs. TrEMBL
Match: W9QZP9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003344 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.0e-57
Identity = 111/150 (74.00%), Postives = 124/150 (82.67%), Query Frame = 1 

Query: 52  GDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKA 111
           G ++QYWLLKTE  EWSW DQAAN G SKWDGVKNKQAQK+LKSM LGD CFFYHSGA+A
Sbjct: 2   GKEKQYWLLKTEAGEWSWEDQAANGGLSKWDGVKNKQAQKNLKSMSLGDLCFFYHSGARA 61

Query: 112 RRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSV 171
           RRVVGVV V REWYS   D VVVDV+AVGEMR+ VDL EM KG +G+K FAL RQPRLSV
Sbjct: 62  RRVVGVVEVTREWYSEGGDAVVVDVKAVGEMRKAVDLTEM-KGDQGLKGFALLRQPRLSV 121

Query: 172 VPVAKEIWDKICELGGGFEGDGTEGGHGSD 202
           VPV +++W++ICELGGGFEGDG E   G D
Sbjct: 122 VPVPRDVWERICELGGGFEGDGKEVVDGDD 150

[Close]
BLAST of MELO3C018021 vs. TAIR10
Match: AT2G14660.1 (AT2G14660.1 unknown protein)

HSP 1 Score: 205.7 bits (522), Expect = 2.7e-53
Identity = 104/156 (66.67%), Postives = 119/156 (76.28%), Query Frame = 1 

Query: 52  GDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKA 111
           G  ++YWLLKTEP EWSW+DQ +N G SKWDGVKNKQAQK+LKSM LGD CFFYHSG K+
Sbjct: 2   GKTKRYWLLKTEPNEWSWSDQESNGGISKWDGVKNKQAQKNLKSMTLGDLCFFYHSGTKS 61

Query: 112 RRVVGVVAVAREWYS----SVEDEVVVDVEAVGEMREPVDLKEMKKGMEGM--KNFALFR 171
           R VVGVV V+REWY+     VE E  VDV+A+GEMR+ VDLKEM KG +G+  K F LFR
Sbjct: 62  RCVVGVVEVSREWYTDDAEGVEGEGAVDVKAIGEMRKCVDLKEM-KGDKGIITKGFVLFR 121

Query: 172 QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSD 202
           QPRLSVVPV +++W+ ICELG GF GDG E    SD
Sbjct: 122 QPRLSVVPVEEDVWNMICELGNGFCGDGKEDCESSD 156

[Close]
BLAST of MELO3C018021 vs. NCBI nr
Match: gi|659108843|ref|XP_008454415.1| (PREDICTED: thymocyte nuclear protein 1 [Cucumis melo])

HSP 1 Score: 414.1 bits (1063), Expect = 1.4e-112
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 

Query: 1   MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLL 60
           MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLL
Sbjct: 1   MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLL 60

Query: 61  KTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAV 120
           KTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAV
Sbjct: 61  KTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAV 120

Query: 121 AREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWD 180
           AREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWD
Sbjct: 121 AREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWD 180

Query: 181 KICELGGGFEGDGTEGGHGSD 202
           KICELGGGFEGDGTEGGHGSD
Sbjct: 181 KICELGGGFEGDGTEGGHGSD 201

[Close]
BLAST of MELO3C018021 vs. NCBI nr
Match: gi|778689136|ref|XP_004150262.2| (PREDICTED: thymocyte nuclear protein 1 [Cucumis sativus])

HSP 1 Score: 364.0 bits (933), Expect = 1.7e-97
Identity = 180/202 (89.11%), Postives = 187/202 (92.57%), Query Frame = 1 

Query: 1   MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKR-NAVIRSEKTMANPVAGDKRQYWL 60
           MRRA+ LG NITTIFP    P+  SLLPLPLN HK+ +AVIRSEKTMAN VAGDKRQYWL
Sbjct: 1   MRRAMYLGGNITTIFPLEILPSLPSLLPLPLNHHKQISAVIRSEKTMANAVAGDKRQYWL 60

Query: 61  LKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA 120
           LKTEPAEWSWADQAANDGR+ WDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA
Sbjct: 61  LKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA 120

Query: 121 VAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIW 180
           VAREWYSSV+DEVVVDVEAVGEMREPVDLKEMKK MEGMKNFALFRQPRLSVVPV KEIW
Sbjct: 121 VAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSVVPVTKEIW 180

Query: 181 DKICELGGGFEGDGTEGGHGSD 202
           DKICELGGGFEGDGTEGG GS+
Sbjct: 181 DKICELGGGFEGDGTEGGDGSE 202

[Close]
BLAST of MELO3C018021 vs. NCBI nr
Match: gi|595791543|ref|XP_007199520.1| (hypothetical protein PRUPE_ppb017205mg [Prunus persica])

HSP 1 Score: 234.6 bits (597), Expect = 1.5e-58
Identity = 112/151 (74.17%), Postives = 129/151 (85.43%), Query Frame = 1 

Query: 52  GDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKA 111
           G+++ YWLLKTEP EWSW DQAAN G +KWDGVKNKQAQK+LKSMKLGD CFFYHSGAKA
Sbjct: 2   GEEKHYWLLKTEPGEWSWEDQAANGGVTKWDGVKNKQAQKNLKSMKLGDLCFFYHSGAKA 61

Query: 112 RRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSV 171
           RRVVGVVAV REWYS   D+ VVDV+AVGEMR PVDLKEM KG +G+K FALFRQPRLSV
Sbjct: 62  RRVVGVVAVVREWYSDGGDDGVVDVKAVGEMRRPVDLKEM-KGEKGLKGFALFRQPRLSV 121

Query: 172 VPVAKEIWDKICELGGGFEGDGTE-GGHGSD 202
           VPV +++W ++C+LGGG++GDGT    H SD
Sbjct: 122 VPVPEDVWIRVCDLGGGYQGDGTVLESHDSD 151

[Close]
BLAST of MELO3C018021 vs. NCBI nr
Match: gi|645261377|ref|XP_008236264.1| (PREDICTED: thymocyte nuclear protein 1-like [Prunus mume])

HSP 1 Score: 231.5 bits (589), Expect = 1.3e-57
Identity = 107/142 (75.35%), Postives = 125/142 (88.03%), Query Frame = 1 

Query: 52  GDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKA 111
           G+++ YWLLKTEP EWSW DQAAN G +KWDGVKNKQAQK+LKSMKLGD CFFYHSGAKA
Sbjct: 2   GEEKHYWLLKTEPGEWSWEDQAANGGVTKWDGVKNKQAQKNLKSMKLGDLCFFYHSGAKA 61

Query: 112 RRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSV 171
           RRVVGVV V REWYS   D+ VVDV+AVGEMR PVDLKEM KG +G+K+FALFRQPRLSV
Sbjct: 62  RRVVGVVTVVREWYSDGGDDSVVDVKAVGEMRRPVDLKEM-KGEKGLKDFALFRQPRLSV 121

Query: 172 VPVAKEIWDKICELGGGFEGDG 194
           VPV +++W ++C+LGGG++GDG
Sbjct: 122 VPVPEDVWIRVCDLGGGYQGDG 142

[Close]
BLAST of MELO3C018021 vs. NCBI nr
Match: gi|255562220|ref|XP_002522118.1| (PREDICTED: thymocyte nuclear protein 1 [Ricinus communis])

HSP 1 Score: 231.5 bits (589), Expect = 1.3e-57
Identity = 107/150 (71.33%), Postives = 126/150 (84.00%), Query Frame = 1 

Query: 52  GDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKA 111
           G ++QYWLLKTEP EWSW DQA+N G + WDGVKNKQAQK+LK+M + D CFFYHSGAKA
Sbjct: 2   GKEKQYWLLKTEPGEWSWDDQASNGGITNWDGVKNKQAQKNLKAMNIKDLCFFYHSGAKA 61

Query: 112 RRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSV 171
           RRVVGVVAV +EWYS+ +DEVVVDV+AVGEMR PVDLKEMK   +G+ +FALFRQPRLSV
Sbjct: 62  RRVVGVVAVVKEWYSNDDDEVVVDVKAVGEMRRPVDLKEMKND-DGLSDFALFRQPRLSV 121

Query: 172 VPVAKEIWDKICELGGGFEGDGTEGGHGSD 202
           VPV KE+W+++CELG GFEGDG +     D
Sbjct: 122 VPVPKEVWERVCELGDGFEGDGNDDNQEQD 150

The following BLAST results are available for this feature:
BLAST of MELO3C018021 vs. Swiss-Prot
Match NameE-valueIdentityDescription
THYN1_MOUSE2.0e-1334.76Thymocyte nuclear protein 1 OS=Mus musculus GN=Thyn1 PE=1 SV=1[more]
THYN1_RAT4.4e-1334.64Thymocyte nuclear protein 1 OS=Rattus norvegicus GN=Thyn1 PE=2 SV=1[more]
THYN1_HUMAN7.5e-1332.93Thymocyte nuclear protein 1 OS=Homo sapiens GN=THYN1 PE=1 SV=1[more]
THYN1_CHICK6.4e-1232.93Thymocyte nuclear protein 1 OS=Gallus gallus GN=THYN1 PE=1 SV=1[more]
THYN1_DANRE2.7e-1028.42Thymocyte nuclear protein 1 OS=Danio rerio GN=thyn1 PE=2 SV=1[more]
BLAST of MELO3C018021 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GBH2_CUCME9.9e-113100.00Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0KWC0_CUCSA1.2e-9789.11Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000630 PE=4 SV=1[more]
M5VHY7_PRUPE1.1e-5874.17Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb017205mg PE=4 SV=1[more]
B9S802_RICCO9.1e-5871.33Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1383260 PE=4 SV=1[more]
W9QZP9_9ROSA2.0e-5774.00Uncharacterized protein OS=Morus notabilis GN=L484_003344 PE=4 SV=1[more]
BLAST of MELO3C018021 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G14660.12.7e-5366.67 unknown protein[more]
BLAST of MELO3C018021 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659108843|ref|XP_008454415.1|1.4e-112100.00PREDICTED: thymocyte nuclear protein 1 [Cucumis melo][more]
gi|778689136|ref|XP_004150262.2|1.7e-9789.11PREDICTED: thymocyte nuclear protein 1 [Cucumis sativus][more]
gi|595791543|ref|XP_007199520.1|1.5e-5874.17hypothetical protein PRUPE_ppb017205mg [Prunus persica][more]
gi|645261377|ref|XP_008236264.1|1.3e-5775.35PREDICTED: thymocyte nuclear protein 1-like [Prunus mume][more]
gi|255562220|ref|XP_002522118.1|1.3e-5771.33PREDICTED: thymocyte nuclear protein 1 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002740EVE_domain
IPR015947PUA-like_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018021T1MELO3C018021T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002740EVE domainGENE3DG3DSA:3.10.590.10coord: 56..185
score: 3.5
IPR002740EVE domainPFAMPF01878EVEcoord: 56..185
score: 2.0
IPR015947PUA-like domainunknownSSF88697PUA domain-likecoord: 53..187
score: 1.33
NoneNo IPR availablePANTHERPTHR14087FAMILY NOT NAMEDcoord: 50..195
score: 7.3
NoneNo IPR availablePANTHERPTHR14087:SF9SUBFAMILY NOT NAMEDcoord: 50..195
score: 7.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C018021Csa4G000630Cucumber (Chinese Long) v2cumeB312
MELO3C018021Cla006451Watermelon (97103) v1mewmB497
MELO3C018021ClCG10G010070Watermelon (Charleston Gray)mewcgB453
MELO3C018021Cla97C10G193070Watermelon (97103) v2mewmbB463
MELO3C018021Bhi11G000917Wax gourdmewgoB564
MELO3C018021CSPI04G00140Wild cucumber (PI 183967)cpimeB310
MELO3C018021Cucsa.298450Cucumber (Gy14) v1cgymeB490
MELO3C018021CmaCh04G004370Cucurbita maxima (Rimu)cmameB700
MELO3C018021CmoCh04G004670Cucurbita moschata (Rifu)cmomeB692
MELO3C018021CsGy4G000150Cucumber (Gy14) v2cgybmeB269
MELO3C018021Carg08110Silver-seed gourdcarmeB0383
MELO3C018021CsaV3_4G000110Cucumber (Chinese Long) v3cucmeB315
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018021Cucumber (Gy14) v2cgybmeB268
MELO3C018021Cucumber (Gy14) v2cgybmeB502
MELO3C018021Silver-seed gourdcarmeB0297
MELO3C018021Cucumber (Chinese Long) v3cucmeB310
MELO3C018021Cucumber (Chinese Long) v3cucmeB585
MELO3C018021Watermelon (97103) v2mewmbB476
MELO3C018021Melon (DHL92) v3.5.1memeB094
MELO3C018021Melon (DHL92) v3.5.1memeB154
MELO3C018021Cucumber (Gy14) v1cgymeB383
MELO3C018021Cucumber (Gy14) v1cgymeB569
MELO3C018021Cucurbita maxima (Rimu)cmameB303
MELO3C018021Cucurbita moschata (Rifu)cmomeB298
MELO3C018021Cucurbita moschata (Rifu)cmomeB475
MELO3C018021Wild cucumber (PI 183967)cpimeB308
MELO3C018021Wild cucumber (PI 183967)cpimeB573
MELO3C018021Cucumber (Chinese Long) v2cumeB309
MELO3C018021Cucumber (Chinese Long) v2cumeB562
MELO3C018021Watermelon (Charleston Gray)mewcgB472
MELO3C018021Watermelon (97103) v1mewmB537
MELO3C018021Cucurbita pepo (Zucchini)cpemeB201
MELO3C018021Cucurbita pepo (Zucchini)cpemeB242
MELO3C018021Cucurbita pepo (Zucchini)cpemeB422
MELO3C018021Bottle gourd (USVL1VR-Ls)lsimeB268
MELO3C018021Bottle gourd (USVL1VR-Ls)lsimeB269