CmaCh04G004370 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G004370
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Thymocyte nuclear protein 1
Location	Cma_Chr04 : 2236293 .. 2236769 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGACGCGGCCGTCGGAGACAAAAAACAGTTCTGGCTTCTGAAGACGGAACCAGCGGAGTGGTCGTGGGCCGACCAAGCCGCGAACGGCGGCCGAACAAAGTGGGACGGCGTCAAGAACAAGCAAGCGCAGAAGCATCTCAAGTCCATGAAACTCGGCGACCACTGTTTCTTCTACCACTCCGGTGCTAAGGCCCGCCGCATCGTCGGCGTGGTTTCCGTCGCACGGGAGTGGTATTCGGAGGGCGATGGCGGCGACGGTGTCGTCGACGTCGAGGAGGTCGGGGAAATGAGAGAACCGGTGGATTTGAAAGAGATGAAGAAGGGGATCGAAGGGATGAAGGATTTCGCGCTGTTTCGGCAACCGAGACTGTCGGTTGTGCCGGTAGCGAAGGAGATTTGGGAGAAGATCTGCGAATTGGGAGGCGGATTTGAAGGGGATGGAACAGATTGCCGCCATGGGAATGAGGAATAG

mRNA sequence

ATGGCTGACGCGGCCGTCGGAGACAAAAAACAGTTCTGGCTTCTGAAGACGGAACCAGCGGAGTGGTCGTGGGCCGACCAAGCCGCGAACGGCGGCCGAACAAAGTGGGACGGCGTCAAGAACAAGCAAGCGCAGAAGCATCTCAAGTCCATGAAACTCGGCGACCACTGTTTCTTCTACCACTCCGGTGCTAAGGCCCGCCGCATCGTCGGCGTGGTTTCCGTCGCACGGGAGTGGTATTCGGAGGGCGATGGCGGCGACGGTGTCGTCGACGTCGAGGAGGTCGGGGAAATGAGAGAACCGGTGGATTTGAAAGAGATGAAGAAGGGGATCGAAGGGATGAAGGATTTCGCGCTGTTTCGGCAACCGAGACTGTCGGTTGTGCCGGTAGCGAAGGAGATTTGGGAGAAGATCTGCGAATTGGGAGGCGGATTTGAAGGGGATGGAACAGATTGCCGCCATGGGAATGAGGAATAG

Coding sequence (CDS)

ATGGCTGACGCGGCCGTCGGAGACAAAAAACAGTTCTGGCTTCTGAAGACGGAACCAGCGGAGTGGTCGTGGGCCGACCAAGCCGCGAACGGCGGCCGAACAAAGTGGGACGGCGTCAAGAACAAGCAAGCGCAGAAGCATCTCAAGTCCATGAAACTCGGCGACCACTGTTTCTTCTACCACTCCGGTGCTAAGGCCCGCCGCATCGTCGGCGTGGTTTCCGTCGCACGGGAGTGGTATTCGGAGGGCGATGGCGGCGACGGTGTCGTCGACGTCGAGGAGGTCGGGGAAATGAGAGAACCGGTGGATTTGAAAGAGATGAAGAAGGGGATCGAAGGGATGAAGGATTTCGCGCTGTTTCGGCAACCGAGACTGTCGGTTGTGCCGGTAGCGAAGGAGATTTGGGAGAAGATCTGCGAATTGGGAGGCGGATTTGAAGGGGATGGAACAGATTGCCGCCATGGGAATGAGGAATAG

Protein sequence

MADAAVGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKHLKSMKLGDHCFFYHSGAKARRIVGVVSVAREWYSEGDGGDGVVDVEEVGEMREPVDLKEMKKGIEGMKDFALFRQPRLSVVPVAKEIWEKICELGGGFEGDGTDCRHGNEE

Homology

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BLAST of CmaCh04G004370 vs. Swiss-Prot
Match: THYN1_MOUSE (Thymocyte nuclear protein 1 OS=Mus musculus GN=Thyn1 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-12
Identity = 55/164 (33.54%), Postives = 81/164 (49.39%), Query Frame = 1


Query: 12  FWLLKTEPA---------EWSWADQAANGGRTK-WDGVKNKQAQKHLKSMKLGDHCFFYH 71
           +WL+K+EP          ++S  D  A   +T  WDGV+N QA+  L++MKL D  FFYH
Sbjct: 57  YWLMKSEPESRLEKGIDMKFSIEDLKAQPKQTACWDGVRNYQARNFLRAMKLEDEAFFYH 116

Query: 72  SGAKARRIVGVVSVAREWY-----------------SEGDGGDGVVDVEEVGEMREPVDL 131
           S  K   IVG++ + +E Y                  E D    +VDV+ V  M+  + L
Sbjct: 117 SNCKQPGIVGLMKIVKEAYPDHTQFEKSNPHYDPSSKEDDPKWSMVDVQFVRMMKRFIPL 176

Query: 132 KEMK------KGIEG-MKDFALFRQPRLSVVPVAKEIWEKICEL 142
           +E+K      K   G +K   LF + RLSV P+ +E ++ I  L
Sbjct: 177 EELKTYHQAHKATGGPLKSMTLFTRQRLSVQPLTQEEFDFILSL 220

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BLAST of CmaCh04G004370 vs. Swiss-Prot
Match: THYN1_RAT (Thymocyte nuclear protein 1 OS=Rattus norvegicus GN=Thyn1 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 55/164 (33.54%), Postives = 79/164 (48.17%), Query Frame = 1


Query: 12  FWLLKTEPA---------EWSWAD-QAANGGRTKWDGVKNKQAQKHLKSMKLGDHCFFYH 71
           +WL+K+EP          ++S  D QA     T WDGV+N QA   L++MKL D  FFYH
Sbjct: 57  YWLMKSEPESRLEKGIDMKFSIEDLQAQPKQTTCWDGVRNYQAWNFLRAMKLEDEAFFYH 116

Query: 72  SGAKARRIVGVVSVAREWY-----------------SEGDGGDGVVDVEEVGEMREPVDL 131
           S  K   IVG++ + +E Y                  E +    +VDV+ V  M+  + L
Sbjct: 117 SNCKQPGIVGLMKIVKEAYPDHTQFEKNDPHYDPSSKEDNPKWSMVDVQFVRMMKRFISL 176

Query: 132 KEMK------KGIEG-MKDFALFRQPRLSVVPVAKEIWEKICEL 142
            E+K      K   G +K   LF + RLSV P+ +E ++ I  L
Sbjct: 177 DELKTYHQAHKATGGPLKSMTLFTRQRLSVQPLTQEEFDFILSL 220

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BLAST of CmaCh04G004370 vs. Swiss-Prot
Match: THYN1_CHICK (Thymocyte nuclear protein 1 OS=Gallus gallus GN=THYN1 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-11
Identity = 52/163 (31.90%), Postives = 79/163 (48.47%), Query Frame = 1


Query: 13  WLLKTEP---------AEWSWADQAANGGRTK-WDGVKNKQAQKHLKSMKLGDHCFFYHS 72
           WLLK+EP          ++S  D  A   +T  W+GV+N QA+  L++MKLG   FFYHS
Sbjct: 74  WLLKSEPESRLEKGVDVKFSIEDLKAQPNQTTFWEGVRNYQARNFLRAMKLGQQAFFYHS 133

Query: 73  GAKARRIVGVVSVAREWYSEGDGGD-----------------GVVDVEEVGEMREPVDLK 132
             K   IVG+V + +E Y +    D                  +VDV+ V   +  + L 
Sbjct: 134 NCKEPGIVGIVKIVKEAYPDHTQFDQKDPHYDSSSRKENPKWSMVDVQFVRMTKRFIPLS 193

Query: 133 EMK------KGIEG-MKDFALFRQPRLSVVPVAKEIWEKICEL 142
           E+K      K   G +K+  LF + RLS+ P+ +E ++ +  L
Sbjct: 194 EIKTHHLAHKADGGPLKNMMLFSRQRLSIQPLTQEEFDFVLSL 236

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BLAST of CmaCh04G004370 vs. Swiss-Prot
Match: THYN1_HUMAN (Thymocyte nuclear protein 1 OS=Homo sapiens GN=THYN1 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-11
Identity = 51/163 (31.29%), Postives = 80/163 (49.08%), Query Frame = 1


Query: 13  WLLKTEP---------AEWSWADQAANGGRTK-WDGVKNKQAQKHLKSMKLGDHCFFYHS 72
           WL+K+EP          ++S  D  A   +T  WDGV+N QA+  L++MKLG+  FFYHS
Sbjct: 57  WLMKSEPESRLEKGVDVKFSIEDLKAQPKQTTCWDGVRNYQARNFLRAMKLGEEAFFYHS 116

Query: 73  GAKARRIVGVVSVAREWY-----------------SEGDGGDGVVDVEEVGEMREPVDLK 132
             K   I G++ + +E Y                  E +    +VDV+ V  M+  + L 
Sbjct: 117 NCKEPGIAGLMKIVKEAYPDHTQFEKNNPHYDPSSKEDNPKWSMVDVQFVRMMKRFIPLA 176

Query: 133 EMK------KGIEG-MKDFALFRQPRLSVVPVAKEIWEKICEL 142
           E+K      K   G +K+  LF + RLS+ P+ +E ++ +  L
Sbjct: 177 ELKSYHQAHKATGGPLKNMVLFTRQRLSIQPLTQEEFDFVLSL 219

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BLAST of CmaCh04G004370 vs. Swiss-Prot
Match: THYN1_DANRE (Thymocyte nuclear protein 1 OS=Danio rerio GN=thyn1 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-10
Identity = 50/163 (30.67%), Postives = 78/163 (47.85%), Query Frame = 1


Query: 13  WLLKTEP---------AEWSWADQAANGGRTK-WDGVKNKQAQKHLKSMKLGDHCFFYHS 72
           WL+K+EP          ++   D  A   +T  WDGV+N QA+  ++ MK+G   FFYHS
Sbjct: 63  WLMKSEPESRIENGVDVKFGIEDLKALPNQTGCWDGVRNYQARNFMREMKVGQQAFFYHS 122

Query: 73  GAKARRIVGVVSVAREWYSEGDGGD-----------------GVVDVEEVGEMREPVDLK 132
             K   I G++ + +E Y +    D                  +VDV+    ++  + L 
Sbjct: 123 NCKEPGIAGLMKIVKEAYVDHTQFDKKDVHYDPSSKADNPKWHMVDVQFERMVKRFIPLA 182

Query: 133 EMKK-----GIEG--MKDFALFRQPRLSVVPVAKEIWEKICEL 142
           E+KK      ++G  +KD ALF + RLSV P+  E +E +  L
Sbjct: 183 ELKKYHLEHRVKGGPLKDMALFTRARLSVQPLTAEEFEFVLSL 225

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BLAST of CmaCh04G004370 vs. TrEMBL
Match: E5GBH2_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 5.6e-71
Identity = 130/157 (82.80%), Postives = 144/157 (91.72%), Query Frame = 1


Query: 1   MADAAVGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKHLKSMKLGDHCFFY 60
           MA+   GDK+Q+WLLKTEPAEWSWADQAAN GR+KWDGVKNKQAQKHLKSMKLGD CFFY
Sbjct: 46  MANPVAGDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFY 105

Query: 61  HSGAKARRIVGVVSVAREWYSEGDGGDGVVDVEEVGEMREPVDLKEMKKGIEGMKDFALF 120
           HSGAKARR+VGVV+VAREWYS  +  + VVDVE VGEMREPVDLKEMKKG+EGMK+FALF
Sbjct: 106 HSGAKARRVVGVVAVAREWYSSVE-DEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALF 165

Query: 121 RQPRLSVVPVAKEIWEKICELGGGFEGDGTDCRHGNE 158
           RQPRLSVVPVAKEIW+KICELGGGFEGDGT+  HG++
Sbjct: 166 RQPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSD 201

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BLAST of CmaCh04G004370 vs. TrEMBL
Match: A0A0A0KWC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000630 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 2.8e-70
Identity = 131/158 (82.91%), Postives = 142/158 (89.87%), Query Frame = 1


Query: 1   MADAAVGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKHLKSMKLGDHCFFY 60
           MA+A  GDK+Q+WLLKTEPAEWSWADQAAN GRT WDGVKNKQAQKHLKSMKLGD CFFY
Sbjct: 47  MANAVAGDKRQYWLLKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFY 106

Query: 61  HSGAKARRIVGVVSVAREWYSEGDGGDGVVDVEEVGEMREPVDLKEMKKGIEGMKDFALF 120
           HSGAKARR+VGVV+VAREWYS  D  + VVDVE VGEMREPVDLKEMKK +EGMK+FALF
Sbjct: 107 HSGAKARRVVGVVAVAREWYSSVD-DEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALF 166

Query: 121 RQPRLSVVPVAKEIWEKICELGGGFEGDGTDCRHGNEE 159
           RQPRLSVVPV KEIW+KICELGGGFEGDGT+   G+EE
Sbjct: 167 RQPRLSVVPVTKEIWDKICELGGGFEGDGTEGGDGSEE 203

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BLAST of CmaCh04G004370 vs. TrEMBL
Match: M5VHY7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb017205mg PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 4.5e-60
Identity = 111/145 (76.55%), Postives = 130/145 (89.66%), Query Frame = 1


Query: 6   VGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKHLKSMKLGDHCFFYHSGAK 65
           +G++K +WLLKTEP EWSW DQAANGG TKWDGVKNKQAQK+LKSMKLGD CFFYHSGAK
Sbjct: 1   MGEEKHYWLLKTEPGEWSWEDQAANGGVTKWDGVKNKQAQKNLKSMKLGDLCFFYHSGAK 60

Query: 66  ARRIVGVVSVAREWYSEGDGGDGVVDVEEVGEMREPVDLKEMKKGIEGMKDFALFRQPRL 125
           ARR+VGVV+V REWYS+G G DGVVDV+ VGEMR PVDLKEM KG +G+K FALFRQPRL
Sbjct: 61  ARRVVGVVAVVREWYSDG-GDDGVVDVKAVGEMRRPVDLKEM-KGEKGLKGFALFRQPRL 120

Query: 126 SVVPVAKEIWEKICELGGGFEGDGT 151
           SVVPV +++W ++C+LGGG++GDGT
Sbjct: 121 SVVPVPEDVWIRVCDLGGGYQGDGT 143

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BLAST of CmaCh04G004370 vs. TrEMBL
Match: B9HN19_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s08910g PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 5.5e-58
Identity = 107/146 (73.29%), Postives = 127/146 (86.99%), Query Frame = 1


Query: 6   VGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKHLKSMKLGDHCFFYHSGAK 65
           +G +K++WLLKTEP EWSW DQA+NGG + WDGVKNKQAQK+LK+MKL D CFFYHSG+ 
Sbjct: 1   MGKEKRYWLLKTEPGEWSWDDQASNGGISNWDGVKNKQAQKNLKAMKLNDLCFFYHSGSN 60

Query: 66  ARRIVGVVSVAREWYSEGDGGDGVVDVEEVGEMREPVDLKEMKKGIEGMKDFALFRQPRL 125
           ARR+VGVV+V REWY E  GG+GVVDV+ VGEMR P+DLKE+ KG EG+K F LFRQPRL
Sbjct: 61  ARRVVGVVTVVREWYDE--GGEGVVDVKAVGEMRRPLDLKEL-KGDEGLKGFQLFRQPRL 120

Query: 126 SVVPVAKEIWEKICELGGGFEGDGTD 152
           SVVPV+KE+WE++CELGGGFEGDG D
Sbjct: 121 SVVPVSKEVWERVCELGGGFEGDGKD 143

[Close]

BLAST of CmaCh04G004370 vs. TrEMBL
Match: M5W4D9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012811mg PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 9.3e-58
Identity = 107/145 (73.79%), Postives = 127/145 (87.59%), Query Frame = 1


Query: 6   VGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKHLKSMKLGDHCFFYHSGAK 65
           + ++KQ+WLLKTEP EWSW +QAANGG TKWDGVKNKQAQKHLKSMKLGD CFFYHSGAK
Sbjct: 1   MSEEKQYWLLKTEPGEWSWENQAANGGVTKWDGVKNKQAQKHLKSMKLGDLCFFYHSGAK 60

Query: 66  ARRIVGVVSVAREWYSEGDGGDGVVDVEEVGEMREPVDLKEMKKGIEGMKDFALFRQPRL 125
           ARR+VGVV+V REWYS+  G DG V V+ VGEMR PVDLKEM KG +G+K FALF+QPRL
Sbjct: 61  ARRVVGVVTVVREWYSD-SGDDGTVAVKAVGEMRRPVDLKEM-KGEKGLKGFALFKQPRL 120

Query: 126 SVVPVAKEIWEKICELGGGFEGDGT 151
           SVVPV +++W ++C+LGGG++GDGT
Sbjct: 121 SVVPVPEDVWIRVCDLGGGYQGDGT 143

[Close]

BLAST of CmaCh04G004370 vs. TAIR10
Match: AT2G14660.1 (AT2G14660.1 unknown protein)

HSP 1 Score: 207.6 bits (527), Expect = 5.6e-54
Identity = 104/159 (65.41%), Postives = 124/159 (77.99%), Query Frame = 1


Query: 6   VGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKHLKSMKLGDHCFFYHSGAK 65
           +G  K++WLLKTEP EWSW+DQ +NGG +KWDGVKNKQAQK+LKSM LGD CFFYHSG K
Sbjct: 1   MGKTKRYWLLKTEPNEWSWSDQESNGGISKWDGVKNKQAQKNLKSMTLGDLCFFYHSGTK 60

Query: 66  ARRIVGVVSVAREWY---SEGDGGDGVVDVEEVGEMREPVDLKEMK--KGIEGMKDFALF 125
           +R +VGVV V+REWY   +EG  G+G VDV+ +GEMR+ VDLKEMK  KGI   K F LF
Sbjct: 61  SRCVVGVVEVSREWYTDDAEGVEGEGAVDVKAIGEMRKCVDLKEMKGDKGII-TKGFVLF 120

Query: 126 RQPRLSVVPVAKEIWEKICELGGGFEGDG-TDCRHGNEE 159
           RQPRLSVVPV +++W  ICELG GF GDG  DC   ++E
Sbjct: 121 RQPRLSVVPVEEDVWNMICELGNGFCGDGKEDCESSDDE 158

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BLAST of CmaCh04G004370 vs. NCBI nr
Match: gi|659108843|ref|XP_008454415.1| (PREDICTED: thymocyte nuclear protein 1 [Cucumis melo])

HSP 1 Score: 275.0 bits (702), Expect = 8.1e-71
Identity = 130/157 (82.80%), Postives = 144/157 (91.72%), Query Frame = 1


Query: 1   MADAAVGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKHLKSMKLGDHCFFY 60
           MA+   GDK+Q+WLLKTEPAEWSWADQAAN GR+KWDGVKNKQAQKHLKSMKLGD CFFY
Sbjct: 46  MANPVAGDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFY 105

Query: 61  HSGAKARRIVGVVSVAREWYSEGDGGDGVVDVEEVGEMREPVDLKEMKKGIEGMKDFALF 120
           HSGAKARR+VGVV+VAREWYS  +  + VVDVE VGEMREPVDLKEMKKG+EGMK+FALF
Sbjct: 106 HSGAKARRVVGVVAVAREWYSSVE-DEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALF 165

Query: 121 RQPRLSVVPVAKEIWEKICELGGGFEGDGTDCRHGNE 158
           RQPRLSVVPVAKEIW+KICELGGGFEGDGT+  HG++
Sbjct: 166 RQPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSD 201

[Close]

BLAST of CmaCh04G004370 vs. NCBI nr
Match: gi|778689136|ref|XP_004150262.2| (PREDICTED: thymocyte nuclear protein 1 [Cucumis sativus])

HSP 1 Score: 272.7 bits (696), Expect = 4.0e-70
Identity = 131/158 (82.91%), Postives = 142/158 (89.87%), Query Frame = 1


Query: 1   MADAAVGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKHLKSMKLGDHCFFY 60
           MA+A  GDK+Q+WLLKTEPAEWSWADQAAN GRT WDGVKNKQAQKHLKSMKLGD CFFY
Sbjct: 47  MANAVAGDKRQYWLLKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFY 106

Query: 61  HSGAKARRIVGVVSVAREWYSEGDGGDGVVDVEEVGEMREPVDLKEMKKGIEGMKDFALF 120
           HSGAKARR+VGVV+VAREWYS  D  + VVDVE VGEMREPVDLKEMKK +EGMK+FALF
Sbjct: 107 HSGAKARRVVGVVAVAREWYSSVD-DEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALF 166

Query: 121 RQPRLSVVPVAKEIWEKICELGGGFEGDGTDCRHGNEE 159
           RQPRLSVVPV KEIW+KICELGGGFEGDGT+   G+EE
Sbjct: 167 RQPRLSVVPVTKEIWDKICELGGGFEGDGTEGGDGSEE 203

[Close]

BLAST of CmaCh04G004370 vs. NCBI nr
Match: gi|645261374|ref|XP_008236263.1| (PREDICTED: thymocyte nuclear protein 1-like [Prunus mume])

HSP 1 Score: 243.0 bits (619), Expect = 3.4e-61
Identity = 116/160 (72.50%), Postives = 136/160 (85.00%), Query Frame = 1


Query: 6   VGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKHLKSMKLGDHCFFYHSGAK 65
           + ++KQ+WLLKTEP EWSW DQAANGG TKWDGVKNKQAQKHLKSMKLGD CFFYHSGAK
Sbjct: 1   MSEEKQYWLLKTEPGEWSWEDQAANGGVTKWDGVKNKQAQKHLKSMKLGDLCFFYHSGAK 60

Query: 66  ARRIVGVVSVAREWYSEGDGGDGVVDVEEVGEMREPVDLKEMKKGIEGMKDFALFRQPRL 125
           ARR+VGVV+V REWYS+G GGDG+VDV+ VGEMR PVDLKEM KG +G+K FALFRQPRL
Sbjct: 61  ARRVVGVVTVVREWYSDG-GGDGMVDVKAVGEMRRPVDLKEM-KGEKGLKSFALFRQPRL 120

Query: 126 SVVPVAKEIWEKICELGGGFEGD-------GTDCRHGNEE 159
           SVVPV +++W ++C+LGGG+EGD       G+D   G+EE
Sbjct: 121 SVVPVPEDVWIRVCDLGGGYEGDGNLFENNGSDGESGDEE 158

[Close]

BLAST of CmaCh04G004370 vs. NCBI nr
Match: gi|595791543|ref|XP_007199520.1| (hypothetical protein PRUPE_ppb017205mg [Prunus persica])

HSP 1 Score: 238.8 bits (608), Expect = 6.4e-60
Identity = 111/145 (76.55%), Postives = 130/145 (89.66%), Query Frame = 1


Query: 6   VGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKHLKSMKLGDHCFFYHSGAK 65
           +G++K +WLLKTEP EWSW DQAANGG TKWDGVKNKQAQK+LKSMKLGD CFFYHSGAK
Sbjct: 1   MGEEKHYWLLKTEPGEWSWEDQAANGGVTKWDGVKNKQAQKNLKSMKLGDLCFFYHSGAK 60

Query: 66  ARRIVGVVSVAREWYSEGDGGDGVVDVEEVGEMREPVDLKEMKKGIEGMKDFALFRQPRL 125
           ARR+VGVV+V REWYS+G G DGVVDV+ VGEMR PVDLKEM KG +G+K FALFRQPRL
Sbjct: 61  ARRVVGVVAVVREWYSDG-GDDGVVDVKAVGEMRRPVDLKEM-KGEKGLKGFALFRQPRL 120

Query: 126 SVVPVAKEIWEKICELGGGFEGDGT 151
           SVVPV +++W ++C+LGGG++GDGT
Sbjct: 121 SVVPVPEDVWIRVCDLGGGYQGDGT 143

[Close]

BLAST of CmaCh04G004370 vs. NCBI nr
Match: gi|470106834|ref|XP_004289763.1| (PREDICTED: thymocyte nuclear protein 1-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 238.4 bits (607), Expect = 8.4e-60
Identity = 109/144 (75.69%), Postives = 125/144 (86.81%), Query Frame = 1


Query: 6   VGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKHLKSMKLGDHCFFYHSGAK 65
           +G +KQ+WLLKTEP EWSW DQAAN G TKWDGVKNKQAQK+LKSM L D CFFYHSGAK
Sbjct: 1   MGKEKQYWLLKTEPGEWSWEDQAANNGITKWDGVKNKQAQKYLKSMNLDDLCFFYHSGAK 60

Query: 66  ARRIVGVVSVAREWYSEGDGGDGVVDVEEVGEMREPVDLKEMKKGIEGMKDFALFRQPRL 125
           ARR+VGVV V REWYSEG+ GDG VDV+ +GEMR P+DLKEM KG EG+K FALFRQPRL
Sbjct: 61  ARRVVGVVKVVREWYSEGENGDGAVDVKAIGEMRRPIDLKEM-KGEEGLKGFALFRQPRL 120

Query: 126 SVVPVAKEIWEKICELGGGFEGDG 150
           SVVPV++++W K+C+LGGGF GDG
Sbjct: 121 SVVPVSEDVWLKVCDLGGGFVGDG 143

The following BLAST results are available for this feature:

BLAST of CmaCh04G004370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
THYN1_MOUSE	1.3e-12	33.54	Thymocyte nuclear protein 1 OS=Mus musculus GN=Thyn1 PE=1 SV=1	[more]
THYN1_RAT	1.1e-11	33.54	Thymocyte nuclear protein 1 OS=Rattus norvegicus GN=Thyn1 PE=2 SV=1	[more]
THYN1_CHICK	1.9e-11	31.90	Thymocyte nuclear protein 1 OS=Gallus gallus GN=THYN1 PE=1 SV=1	[more]
THYN1_HUMAN	1.9e-11	31.29	Thymocyte nuclear protein 1 OS=Homo sapiens GN=THYN1 PE=1 SV=1	[more]
THYN1_DANRE	2.1e-10	30.67	Thymocyte nuclear protein 1 OS=Danio rerio GN=thyn1 PE=2 SV=1	[more]

BLAST of CmaCh04G004370 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GBH2_CUCME	5.6e-71	82.80	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0KWC0_CUCSA	2.8e-70	82.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000630 PE=4 SV=1	[more]
M5VHY7_PRUPE	4.5e-60	76.55	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb017205mg PE=4 SV=1	[more]
B9HN19_POPTR	5.5e-58	73.29	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s08910g PE=4 SV=1	[more]
M5W4D9_PRUPE	9.3e-58	73.79	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012811mg PE=4 SV=1	[more]

BLAST of CmaCh04G004370 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14660.1	5.6e-54	65.41	unknown protein	[more]

BLAST of CmaCh04G004370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659108843\|ref\|XP_008454415.1\|	8.1e-71	82.80	PREDICTED: thymocyte nuclear protein 1 [Cucumis melo]	[more]
gi\|778689136\|ref\|XP_004150262.2\|	4.0e-70	82.91	PREDICTED: thymocyte nuclear protein 1 [Cucumis sativus]	[more]
gi\|645261374\|ref\|XP_008236263.1\|	3.4e-61	72.50	PREDICTED: thymocyte nuclear protein 1-like [Prunus mume]	[more]
gi\|595791543\|ref\|XP_007199520.1\|	6.4e-60	76.55	hypothetical protein PRUPE_ppb017205mg [Prunus persica]	[more]
gi\|470106834\|ref\|XP_004289763.1\|	8.4e-60	75.69	PREDICTED: thymocyte nuclear protein 1-like [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002740	EVE_domain
IPR015947	PUA-like_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G004370.1	CmaCh04G004370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002740	EVE domain	GENE3D	G3DSA:3.10.590.10		coord: 11..141 score: 1.8
IPR002740	EVE domain	PFAM	PF01878	EVE	coord: 11..141 score: 2.8
IPR015947	PUA-like domain	unknown	SSF88697	PUA domain-like	coord: 9..143 score: 3.48
None	No IPR available	PANTHER	PTHR14087	FAMILY NOT NAMED	coord: 4..151 score: 6.1
None	No IPR available	PANTHER	PTHR14087:SF9	SUBFAMILY NOT NAMED	coord: 4..151 score: 6.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G004370	Cucsa.298450	Cucumber (Gy14) v1	cgycmaB0825
CmaCh04G004370	Cla006451	Watermelon (97103) v1	cmawmB653
CmaCh04G004370	Csa4G000630	Cucumber (Chinese Long) v2	cmacuB709
CmaCh04G004370	MELO3C018021	Melon (DHL92) v3.5.1	cmameB700
CmaCh04G004370	ClCG10G010070	Watermelon (Charleston Gray)	cmawcgB609
CmaCh04G004370	CSPI04G00140	Wild cucumber (PI 183967)	cmacpiB715
CmaCh04G004370	CmoCh04G004670	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G004370	MELO3C018021.2	Melon (DHL92) v3.6.1	cmamedB789
CmaCh04G004370	CsaV3_4G000110	Cucumber (Chinese Long) v3	cmacucB0843
CmaCh04G004370	Cla97C10G193070	Watermelon (97103) v2	cmawmbB713
CmaCh04G004370	Bhi11G000917	Wax gourd	cmawgoB0814
CmaCh04G004370	CsGy4G000150	Cucumber (Gy14) v2	cgybcmaB543

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G004370	Wax gourd	cmawgoB0915
CmaCh04G004370	Cucurbita maxima (Rimu)	cmacmaB163
CmaCh04G004370	Cucurbita maxima (Rimu)	cmacmaB351
CmaCh04G004370	Cucumber (Gy14) v1	cgycmaB0232
CmaCh04G004370	Cucumber (Gy14) v1	cgycmaB0629
CmaCh04G004370	Cucurbita moschata (Rifu)	cmacmoB678
CmaCh04G004370	Cucurbita moschata (Rifu)	cmacmoB701
CmaCh04G004370	Wild cucumber (PI 183967)	cmacpiB786
CmaCh04G004370	Cucumber (Chinese Long) v2	cmacuB721
CmaCh04G004370	Cucumber (Chinese Long) v2	cmacuB775
CmaCh04G004370	Cucumber (Chinese Long) v2	cmacuB776
CmaCh04G004370	Melon (DHL92) v3.5.1	cmameB672
CmaCh04G004370	Melon (DHL92) v3.5.1	cmameB711
CmaCh04G004370	Cucurbita pepo (Zucchini)	cmacpeB715
CmaCh04G004370	Cucurbita pepo (Zucchini)	cmacpeB719
CmaCh04G004370	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G004370	Cucurbita pepo (Zucchini)	cmacpeB749
CmaCh04G004370	Bottle gourd (USVL1VR-Ls)	cmalsiB640
CmaCh04G004370	Bottle gourd (USVL1VR-Ls)	cmalsiB657
CmaCh04G004370	Bottle gourd (USVL1VR-Ls)	cmalsiB662
CmaCh04G004370	Bottle gourd (USVL1VR-Ls)	cmalsiB674
CmaCh04G004370	Cucumber (Gy14) v2	cgybcmaB553
CmaCh04G004370	Cucumber (Gy14) v2	cgybcmaB843
CmaCh04G004370	Cucumber (Gy14) v2	cgybcmaB964
CmaCh04G004370	Melon (DHL92) v3.6.1	cmamedB754
CmaCh04G004370	Melon (DHL92) v3.6.1	cmamedB787
CmaCh04G004370	Melon (DHL92) v3.6.1	cmamedB801
CmaCh04G004370	Silver-seed gourd	carcmaB0408
CmaCh04G004370	Silver-seed gourd	carcmaB0529
CmaCh04G004370	Silver-seed gourd	carcmaB0634
CmaCh04G004370	Silver-seed gourd	carcmaB1027
CmaCh04G004370	Cucumber (Chinese Long) v3	cmacucB0854
CmaCh04G004370	Cucumber (Chinese Long) v3	cmacucB0914
CmaCh04G004370	Cucumber (Chinese Long) v3	cmacucB0918
CmaCh04G004370	Watermelon (97103) v2	cmawmbB744