Csa4G000630 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa4G000630
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Thymocyte nuclear protein; contains IPR015947 (PUA-like domain)
Location	Chr4 : 87570 .. 88546 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAAATGAGGAGGGCCATGTATTTGGGCGGCAATATAACCACGATTTTCCCGCTGGAAATTCTACCGTCGTTACCGTCTCTTCTTCCTCTCCCACTTAACCATCACAAGCAGATCAGCGCAGTAATTCGTTCCGAGAAAACAATGGCCAACGCTGTCGCCGGAGACAAAAGGCAGTATTGGCTTCTGAAGACGGAGCCGGCAGAGTGGTCGTGGGCGGACCAAGCGGCCAACGACGGACGAACAACGTGGGACGGCGTTAAGAACAAGCAAGCTCAGAAGCATCTTAAGTCCATGAAACTCGGCGACCGCTGTTTCTTCTACCACTCCGGGGCCAAGGCCCGCCGTGTCGTGGGCGTGGTCGCGGTCGCAAGGGAATGGTACTCGTCAGTGGACGATGAAGTCGTCGTGGACGTGGAGGCGGTTGGAGAGATGAGGGAACCGGTGGATTTGAAAGAGATGAAGAAGAGGATGGAAGGGATGAAGAATTTCGCTCTGTTTAGGCAACCAAGGCTGTCGGTCGTGCCGGTTACGAAGGAGATTTGGGATAAAATCTGCGAATTGGGAGGCGGGTTTGAAGGAGATGGAACTGAGGGCGGGGATGGGAGTGAGGAATAGAGATTGTATTTGAATGCGCTCAAGGTGTTTGTGAATATGCTCAGGAGAGTTTTAAGGGAAGTGAATGCATAAACCATATCTGTTTTGGAAATGTGGGAAGAAGAGGATCTACAAAGAACAAAGGGAAACGCTCAGTCAGGTATGTATATATATATATATACATATTGTTTTTGTTGTGTGTTTTAATGGTGGCTTATGAATTCTTGGGGAATCAAATTTTGGCTATGTAGTTTCTTTAGTTCTTCAACAATGGCTGAACTAGAGTTTTACATTTACTTCCCTTTCTTTTGTATTTATATATATTCTCTAACCGAACACAACTCAACTAGCCTACCATGTATTAGCAATCAGTTTCAGGTG

mRNA sequence

ATGAGGAGGGCCATGTATTTGGGCGGCAATATAACCACGATTTTCCCGCTGGAAATTCTACCGTCGTTACCGTCTCTTCTTCCTCTCCCACTTAACCATCACAAGCAGATCAGCGCAGTAATTCGTTCCGAGAAAACAATGGCCAACGCTGTCGCCGGAGACAAAAGGCAGTATTGGCTTCTGAAGACGGAGCCGGCAGAGTGGTCGTGGGCGGACCAAGCGGCCAACGACGGACGAACAACGTGGGACGGCGTTAAGAACAAGCAAGCTCAGAAGCATCTTAAGTCCATGAAACTCGGCGACCGCTGTTTCTTCTACCACTCCGGGGCCAAGGCCCGCCGTGTCGTGGGCGTGGTCGCGGTCGCAAGGGAATGGTACTCGTCAGTGGACGATGAAGTCGTCGTGGACGTGGAGGCGGTTGGAGAGATGAGGGAACCGGTGGATTTGAAAGAGATGAAGAAGAGGATGGAAGGGATGAAGAATTTCGCTCTGTTTAGGCAACCAAGGCTGTCGGTCGTGCCGGTTACGAAGGAGATTTGGGATAAAATCTGCGAATTGGGAGGCGGGTTTGAAGGAGATGGAACTGAGGGCGGGGATGGGAGTGAGGAATAG

Coding sequence (CDS)

ATGAGGAGGGCCATGTATTTGGGCGGCAATATAACCACGATTTTCCCGCTGGAAATTCTACCGTCGTTACCGTCTCTTCTTCCTCTCCCACTTAACCATCACAAGCAGATCAGCGCAGTAATTCGTTCCGAGAAAACAATGGCCAACGCTGTCGCCGGAGACAAAAGGCAGTATTGGCTTCTGAAGACGGAGCCGGCAGAGTGGTCGTGGGCGGACCAAGCGGCCAACGACGGACGAACAACGTGGGACGGCGTTAAGAACAAGCAAGCTCAGAAGCATCTTAAGTCCATGAAACTCGGCGACCGCTGTTTCTTCTACCACTCCGGGGCCAAGGCCCGCCGTGTCGTGGGCGTGGTCGCGGTCGCAAGGGAATGGTACTCGTCAGTGGACGATGAAGTCGTCGTGGACGTGGAGGCGGTTGGAGAGATGAGGGAACCGGTGGATTTGAAAGAGATGAAGAAGAGGATGGAAGGGATGAAGAATTTCGCTCTGTTTAGGCAACCAAGGCTGTCGGTCGTGCCGGTTACGAAGGAGATTTGGGATAAAATCTGCGAATTGGGAGGCGGGTTTGAAGGAGATGGAACTGAGGGCGGGGATGGGAGTGAGGAATAG

Protein sequence

MRRAMYLGGNITTIFPLEILPSLPSLLPLPLNHHKQISAVIRSEKTMANAVAGDKRQYWLLKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAVAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSVVPVTKEIWDKICELGGGFEGDGTEGGDGSEE*

Homology

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BLAST of Csa4G000630 vs. Swiss-Prot
Match: THYN1_HUMAN (Thymocyte nuclear protein 1 OS=Homo sapiens GN=THYN1 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-14
Identity = 54/164 (32.93%), Postives = 82/164 (50.00%), Query Frame = 1


Query: 58  YWLLKTEP---------AEWSWADQAANDGRTT-WDGVKNKQAQKHLKSMKLGDRCFFYH 117
           +WL+K+EP          ++S  D  A   +TT WDGV+N QA+  L++MKLG+  FFYH
Sbjct: 56  HWLMKSEPESRLEKGVDVKFSIEDLKAQPKQTTCWDGVRNYQARNFLRAMKLGEEAFFYH 115

Query: 118 SGAKARRVVGVVAVAREWY---------------SSVDDE---VVVDVEAVGEMREPVDL 177
           S  K   + G++ + +E Y               SS +D     +VDV+ V  M+  + L
Sbjct: 116 SNCKEPGIAGLMKIVKEAYPDHTQFEKNNPHYDPSSKEDNPKWSMVDVQFVRMMKRFIPL 175

Query: 178 KEMKKRMEG-------MKNFALFRQPRLSVVPVTKEIWDKICEL 187
            E+K   +        +KN  LF + RLS+ P+T+E +D +  L
Sbjct: 176 AELKSYHQAHKATGGPLKNMVLFTRQRLSIQPLTQEEFDFVLSL 219

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BLAST of Csa4G000630 vs. Swiss-Prot
Match: THYN1_RAT (Thymocyte nuclear protein 1 OS=Rattus norvegicus GN=Thyn1 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-14
Identity = 61/179 (34.08%), Postives = 85/179 (47.49%), Query Frame = 1


Query: 44  EKTMANAVAGDK-RQYWLLKTEPA---------EWSWADQAANDGRTT-WDGVKNKQAQK 103
           EKT      G     YWL+K+EP          ++S  D  A   +TT WDGV+N QA  
Sbjct: 42  EKTTTFKTCGKNLSNYWLMKSEPESRLEKGIDMKFSIEDLQAQPKQTTCWDGVRNYQAWN 101

Query: 104 HLKSMKLGDRCFFYHSGAKARRVVGVVAVAREWY---------------SSVDDE---VV 163
            L++MKL D  FFYHS  K   +VG++ + +E Y               SS +D     +
Sbjct: 102 FLRAMKLEDEAFFYHSNCKQPGIVGLMKIVKEAYPDHTQFEKNDPHYDPSSKEDNPKWSM 161

Query: 164 VDVEAVGEMREPVDLKEMKKRMEG-------MKNFALFRQPRLSVVPVTKEIWDKICEL 187
           VDV+ V  M+  + L E+K   +        +K+  LF + RLSV P+T+E +D I  L
Sbjct: 162 VDVQFVRMMKRFISLDELKTYHQAHKATGGPLKSMTLFTRQRLSVQPLTQEEFDFILSL 220

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BLAST of Csa4G000630 vs. Swiss-Prot
Match: THYN1_MOUSE (Thymocyte nuclear protein 1 OS=Mus musculus GN=Thyn1 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.1e-14
Identity = 56/164 (34.15%), Postives = 83/164 (50.61%), Query Frame = 1


Query: 58  YWLLKTEPA---------EWSWADQAANDGRTT-WDGVKNKQAQKHLKSMKLGDRCFFYH 117
           YWL+K+EP          ++S  D  A   +T  WDGV+N QA+  L++MKL D  FFYH
Sbjct: 57  YWLMKSEPESRLEKGIDMKFSIEDLKAQPKQTACWDGVRNYQARNFLRAMKLEDEAFFYH 116

Query: 118 SGAKARRVVGVVAVAREWY---------------SSVDDE---VVVDVEAVGEMREPVDL 177
           S  K   +VG++ + +E Y               SS +D+    +VDV+ V  M+  + L
Sbjct: 117 SNCKQPGIVGLMKIVKEAYPDHTQFEKSNPHYDPSSKEDDPKWSMVDVQFVRMMKRFIPL 176

Query: 178 KEMKKRMEG-------MKNFALFRQPRLSVVPVTKEIWDKICEL 187
           +E+K   +        +K+  LF + RLSV P+T+E +D I  L
Sbjct: 177 EELKTYHQAHKATGGPLKSMTLFTRQRLSVQPLTQEEFDFILSL 220

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BLAST of Csa4G000630 vs. Swiss-Prot
Match: THYN1_CHICK (Thymocyte nuclear protein 1 OS=Gallus gallus GN=THYN1 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13
Identity = 56/164 (34.15%), Postives = 83/164 (50.61%), Query Frame = 1


Query: 58  YWLLKTEP---------AEWSWADQAANDGRTT-WDGVKNKQAQKHLKSMKLGDRCFFYH 117
           +WLLK+EP          ++S  D  A   +TT W+GV+N QA+  L++MKLG + FFYH
Sbjct: 73  HWLLKSEPESRLEKGVDVKFSIEDLKAQPNQTTFWEGVRNYQARNFLRAMKLGQQAFFYH 132

Query: 118 SGAKARRVVGVVAVAREWY--------------SSVDDE----VVVDVEAVGEMREPVDL 177
           S  K   +VG+V + +E Y              SS   E     +VDV+ V   +  + L
Sbjct: 133 SNCKEPGIVGIVKIVKEAYPDHTQFDQKDPHYDSSSRKENPKWSMVDVQFVRMTKRFIPL 192

Query: 178 KEMK-----KRMEG--MKNFALFRQPRLSVVPVTKEIWDKICEL 187
            E+K      + +G  +KN  LF + RLS+ P+T+E +D +  L
Sbjct: 193 SEIKTHHLAHKADGGPLKNMMLFSRQRLSIQPLTQEEFDFVLSL 236

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BLAST of Csa4G000630 vs. Swiss-Prot
Match: THYN1_DANRE (Thymocyte nuclear protein 1 OS=Danio rerio GN=thyn1 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.5e-11
Identity = 55/186 (29.57%), Postives = 88/186 (47.31%), Query Frame = 1


Query: 38  SAVIRSEKTMANAVAGDKRQY--WLLKTEP---------AEWSWADQAANDGRT-TWDGV 97
           SA ++ +    N     K  Y  WL+K+EP          ++   D  A   +T  WDGV
Sbjct: 40  SAAVKGDVENKNDDDACKPSYSRWLMKSEPESRIENGVDVKFGIEDLKALPNQTGCWDGV 99

Query: 98  KNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAVAREWY----------------SSV 157
           +N QA+  ++ MK+G + FFYHS  K   + G++ + +E Y                S  
Sbjct: 100 RNYQARNFMREMKVGQQAFFYHSNCKEPGIAGLMKIVKEAYVDHTQFDKKDVHYDPSSKA 159

Query: 158 DDEV--VVDVEAVGEMREPVDLKEMKK-----RMEG--MKNFALFRQPRLSVVPVTKEIW 187
           D+    +VDV+    ++  + L E+KK     R++G  +K+ ALF + RLSV P+T E +
Sbjct: 160 DNPKWHMVDVQFERMVKRFIPLAELKKYHLEHRVKGGPLKDMALFTRARLSVQPLTAEEF 219

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BLAST of Csa4G000630 vs. TrEMBL
Match: A0A0A0KWC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000630 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 1.2e-113
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1


Query: 1   MRRAMYLGGNITTIFPLEILPSLPSLLPLPLNHHKQISAVIRSEKTMANAVAGDKRQYWL 60
           MRRAMYLGGNITTIFPLEILPSLPSLLPLPLNHHKQISAVIRSEKTMANAVAGDKRQYWL
Sbjct: 1   MRRAMYLGGNITTIFPLEILPSLPSLLPLPLNHHKQISAVIRSEKTMANAVAGDKRQYWL 60

Query: 61  LKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA 120
           LKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA
Sbjct: 61  LKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA 120

Query: 121 VAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSVVPVTKEIW 180
           VAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSVVPVTKEIW
Sbjct: 121 VAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSVVPVTKEIW 180

Query: 181 DKICELGGGFEGDGTEGGDGSEE 204
           DKICELGGGFEGDGTEGGDGSEE
Sbjct: 181 DKICELGGGFEGDGTEGGDGSEE 203

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BLAST of Csa4G000630 vs. TrEMBL
Match: E5GBH2_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.2e-97
Identity = 180/202 (89.11%), Postives = 187/202 (92.57%), Query Frame = 1


Query: 1   MRRAMYLGGNITTIFPLEILPSLPSLLPLPLNHHKQISAVIRSEKTMANAVAGDKRQYWL 60
           MRRA+ LG NITTIFP    P+  SLLPLPLN HK+ +AVIRSEKTMAN VAGDKRQYWL
Sbjct: 1   MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKR-NAVIRSEKTMANPVAGDKRQYWL 60

Query: 61  LKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA 120
           LKTEPAEWSWADQAANDGR+ WDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA
Sbjct: 61  LKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA 120

Query: 121 VAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSVVPVTKEIW 180
           VAREWYSSV+DEVVVDVEAVGEMREPVDLKEMKK MEGMKNFALFRQPRLSVVPV KEIW
Sbjct: 121 VAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIW 180

Query: 181 DKICELGGGFEGDGTEGGDGSE 203
           DKICELGGGFEGDGTEGG GS+
Sbjct: 181 DKICELGGGFEGDGTEGGHGSD 201

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BLAST of Csa4G000630 vs. TrEMBL
Match: B9S802_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1383260 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.2e-58
Identity = 108/144 (75.00%), Postives = 125/144 (86.81%), Query Frame = 1


Query: 53  GDKRQYWLLKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKA 112
           G ++QYWLLKTEP EWSW DQA+N G T WDGVKNKQAQK+LK+M + D CFFYHSGAKA
Sbjct: 2   GKEKQYWLLKTEPGEWSWDDQASNGGITNWDGVKNKQAQKNLKAMNIKDLCFFYHSGAKA 61

Query: 113 RRVVGVVAVAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSV 172
           RRVVGVVAV +EWYS+ DDEVVVDV+AVGEMR PVDLKEMK   +G+ +FALFRQPRLSV
Sbjct: 62  RRVVGVVAVVKEWYSNDDDEVVVDVKAVGEMRRPVDLKEMKND-DGLSDFALFRQPRLSV 121

Query: 173 VPVTKEIWDKICELGGGFEGDGTE 197
           VPV KE+W+++CELG GFEGDG +
Sbjct: 122 VPVPKEVWERVCELGDGFEGDGND 144

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BLAST of Csa4G000630 vs. TrEMBL
Match: M5VHY7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb017205mg PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.2e-58
Identity = 112/158 (70.89%), Postives = 129/158 (81.65%), Query Frame = 1


Query: 53  GDKRQYWLLKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKA 112
           G+++ YWLLKTEP EWSW DQAAN G T WDGVKNKQAQK+LKSMKLGD CFFYHSGAKA
Sbjct: 2   GEEKHYWLLKTEPGEWSWEDQAANGGVTKWDGVKNKQAQKNLKSMKLGDLCFFYHSGAKA 61

Query: 113 RRVVGVVAVAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSV 172
           RRVVGVVAV REWYS   D+ VVDV+AVGEMR PVDLKEMK   +G+K FALFRQPRLSV
Sbjct: 62  RRVVGVVAVVREWYSDGGDDGVVDVKAVGEMRRPVDLKEMKGE-KGLKGFALFRQPRLSV 121

Query: 173 VPVTKEIWDKICELGGGFEGDGT-------EGGDGSEE 204
           VPV +++W ++C+LGGG++GDGT       +G  G EE
Sbjct: 122 VPVPEDVWIRVCDLGGGYQGDGTVLESHDSDGESGEEE 158

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BLAST of Csa4G000630 vs. TrEMBL
Match: M5W4D9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012811mg PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.0e-56
Identity = 105/144 (72.92%), Postives = 122/144 (84.72%), Query Frame = 1


Query: 54  DKRQYWLLKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKAR 113
           +++QYWLLKTEP EWSW +QAAN G T WDGVKNKQAQKHLKSMKLGD CFFYHSGAKAR
Sbjct: 3   EEKQYWLLKTEPGEWSWENQAANGGVTKWDGVKNKQAQKHLKSMKLGDLCFFYHSGAKAR 62

Query: 114 RVVGVVAVAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSVV 173
           RVVGVV V REWYS   D+  V V+AVGEMR PVDLKEMK   +G+K FALF+QPRLSVV
Sbjct: 63  RVVGVVTVVREWYSDSGDDGTVAVKAVGEMRRPVDLKEMKGE-KGLKGFALFKQPRLSVV 122

Query: 174 PVTKEIWDKICELGGGFEGDGTEG 198
           PV +++W ++C+LGGG++GDGT G
Sbjct: 123 PVPEDVWIRVCDLGGGYQGDGTVG 145

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BLAST of Csa4G000630 vs. TAIR10
Match: AT2G14660.1 (AT2G14660.1 unknown protein)

HSP 1 Score: 198.4 bits (503), Expect = 4.4e-51
Identity = 99/157 (63.06%), Postives = 119/157 (75.80%), Query Frame = 1


Query: 53  GDKRQYWLLKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKA 112
           G  ++YWLLKTEP EWSW+DQ +N G + WDGVKNKQAQK+LKSM LGD CFFYHSG K+
Sbjct: 2   GKTKRYWLLKTEPNEWSWSDQESNGGISKWDGVKNKQAQKNLKSMTLGDLCFFYHSGTKS 61

Query: 113 RRVVGVVAVAREWYS----SVDDEVVVDVEAVGEMREPVDLKEMKKRMEGM--KNFALFR 172
           R VVGVV V+REWY+     V+ E  VDV+A+GEMR+ VDLKEMK   +G+  K F LFR
Sbjct: 62  RCVVGVVEVSREWYTDDAEGVEGEGAVDVKAIGEMRKCVDLKEMKGD-KGIITKGFVLFR 121

Query: 173 QPRLSVVPVTKEIWDKICELGGGFEGDGTEGGDGSEE 204
           QPRLSVVPV +++W+ ICELG GF GDG E  + S++
Sbjct: 122 QPRLSVVPVEEDVWNMICELGNGFCGDGKEDCESSDD 157

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BLAST of Csa4G000630 vs. NCBI nr
Match: gi|778689136|ref|XP_004150262.2| (PREDICTED: thymocyte nuclear protein 1 [Cucumis sativus])

HSP 1 Score: 417.2 bits (1071), Expect = 1.7e-113
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1


Query: 1   MRRAMYLGGNITTIFPLEILPSLPSLLPLPLNHHKQISAVIRSEKTMANAVAGDKRQYWL 60
           MRRAMYLGGNITTIFPLEILPSLPSLLPLPLNHHKQISAVIRSEKTMANAVAGDKRQYWL
Sbjct: 1   MRRAMYLGGNITTIFPLEILPSLPSLLPLPLNHHKQISAVIRSEKTMANAVAGDKRQYWL 60

Query: 61  LKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA 120
           LKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA
Sbjct: 61  LKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA 120

Query: 121 VAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSVVPVTKEIW 180
           VAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSVVPVTKEIW
Sbjct: 121 VAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSVVPVTKEIW 180

Query: 181 DKICELGGGFEGDGTEGGDGSEE 204
           DKICELGGGFEGDGTEGGDGSEE
Sbjct: 181 DKICELGGGFEGDGTEGGDGSEE 203

[Close]

BLAST of Csa4G000630 vs. NCBI nr
Match: gi|659108843|ref|XP_008454415.1| (PREDICTED: thymocyte nuclear protein 1 [Cucumis melo])

HSP 1 Score: 364.0 bits (933), Expect = 1.7e-97
Identity = 180/202 (89.11%), Postives = 187/202 (92.57%), Query Frame = 1


Query: 1   MRRAMYLGGNITTIFPLEILPSLPSLLPLPLNHHKQISAVIRSEKTMANAVAGDKRQYWL 60
           MRRA+ LG NITTIFP    P+  SLLPLPLN HK+ +AVIRSEKTMAN VAGDKRQYWL
Sbjct: 1   MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKR-NAVIRSEKTMANPVAGDKRQYWL 60

Query: 61  LKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA 120
           LKTEPAEWSWADQAANDGR+ WDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA
Sbjct: 61  LKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA 120

Query: 121 VAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSVVPVTKEIW 180
           VAREWYSSV+DEVVVDVEAVGEMREPVDLKEMKK MEGMKNFALFRQPRLSVVPV KEIW
Sbjct: 121 VAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIW 180

Query: 181 DKICELGGGFEGDGTEGGDGSE 203
           DKICELGGGFEGDGTEGG GS+
Sbjct: 181 DKICELGGGFEGDGTEGGHGSD 201

[Close]

BLAST of Csa4G000630 vs. NCBI nr
Match: gi|255562220|ref|XP_002522118.1| (PREDICTED: thymocyte nuclear protein 1 [Ricinus communis])

HSP 1 Score: 233.0 bits (593), Expect = 4.6e-58
Identity = 108/144 (75.00%), Postives = 125/144 (86.81%), Query Frame = 1


Query: 53  GDKRQYWLLKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKA 112
           G ++QYWLLKTEP EWSW DQA+N G T WDGVKNKQAQK+LK+M + D CFFYHSGAKA
Sbjct: 2   GKEKQYWLLKTEPGEWSWDDQASNGGITNWDGVKNKQAQKNLKAMNIKDLCFFYHSGAKA 61

Query: 113 RRVVGVVAVAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSV 172
           RRVVGVVAV +EWYS+ DDEVVVDV+AVGEMR PVDLKEMK   +G+ +FALFRQPRLSV
Sbjct: 62  RRVVGVVAVVKEWYSNDDDEVVVDVKAVGEMRRPVDLKEMKND-DGLSDFALFRQPRLSV 121

Query: 173 VPVTKEIWDKICELGGGFEGDGTE 197
           VPV KE+W+++CELG GFEGDG +
Sbjct: 122 VPVPKEVWERVCELGDGFEGDGND 144

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BLAST of Csa4G000630 vs. NCBI nr
Match: gi|595791543|ref|XP_007199520.1| (hypothetical protein PRUPE_ppb017205mg [Prunus persica])

HSP 1 Score: 233.0 bits (593), Expect = 4.6e-58
Identity = 112/158 (70.89%), Postives = 129/158 (81.65%), Query Frame = 1


Query: 53  GDKRQYWLLKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKA 112
           G+++ YWLLKTEP EWSW DQAAN G T WDGVKNKQAQK+LKSMKLGD CFFYHSGAKA
Sbjct: 2   GEEKHYWLLKTEPGEWSWEDQAANGGVTKWDGVKNKQAQKNLKSMKLGDLCFFYHSGAKA 61

Query: 113 RRVVGVVAVAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSV 172
           RRVVGVVAV REWYS   D+ VVDV+AVGEMR PVDLKEMK   +G+K FALFRQPRLSV
Sbjct: 62  RRVVGVVAVVREWYSDGGDDGVVDVKAVGEMRRPVDLKEMKGE-KGLKGFALFRQPRLSV 121

Query: 173 VPVTKEIWDKICELGGGFEGDGT-------EGGDGSEE 204
           VPV +++W ++C+LGGG++GDGT       +G  G EE
Sbjct: 122 VPVPEDVWIRVCDLGGGYQGDGTVLESHDSDGESGEEE 158

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BLAST of Csa4G000630 vs. NCBI nr
Match: gi|694414231|ref|XP_009335344.1| (PREDICTED: thymocyte nuclear protein 1 [Pyrus x bretschneideri])

HSP 1 Score: 232.6 bits (592), Expect = 5.9e-58
Identity = 115/162 (70.99%), Postives = 131/162 (80.86%), Query Frame = 1


Query: 44  EKTMANAVAGDKRQYWLLKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRC 103
           EKT   ++A +K QYWLLKTEP EWSW DQAAN G T WDGVKNKQAQK+LKSMKL D C
Sbjct: 45  EKTPTPSMAAEK-QYWLLKTEPGEWSWEDQAANGGVTKWDGVKNKQAQKYLKSMKLSDLC 104

Query: 104 FFYHSGAKARRVVGVVAVAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFA 163
           FFYHSG KARRVVGVV+V REWYS   D+ VVDV+AVGEMR PVDLKEM KR +G+K FA
Sbjct: 105 FFYHSGTKARRVVGVVSVLREWYSEGGDDAVVDVKAVGEMRRPVDLKEM-KRDQGLKGFA 164

Query: 164 LFRQPRLSVVPVTKEIWDKICELGGGFEGDGT---EGGDGSE 203
           LFRQPRLSVVPV++++W KIC+LG G+EGDG    + G G E
Sbjct: 165 LFRQPRLSVVPVSEDVWMKICDLGSGYEGDGNAFEDDGSGGE 204

The following BLAST results are available for this feature:

BLAST of Csa4G000630 vs. Swiss-Prot


Match Name	E-value	Identity	Description
THYN1_HUMAN	2.4e-14	32.93	Thymocyte nuclear protein 1 OS=Homo sapiens GN=THYN1 PE=1 SV=1	[more]
THYN1_RAT	2.4e-14	34.08	Thymocyte nuclear protein 1 OS=Rattus norvegicus GN=Thyn1 PE=2 SV=1	[more]
THYN1_MOUSE	3.1e-14	34.15	Thymocyte nuclear protein 1 OS=Mus musculus GN=Thyn1 PE=1 SV=1	[more]
THYN1_CHICK	1.2e-13	34.15	Thymocyte nuclear protein 1 OS=Gallus gallus GN=THYN1 PE=1 SV=1	[more]
THYN1_DANRE	5.5e-11	29.57	Thymocyte nuclear protein 1 OS=Danio rerio GN=thyn1 PE=2 SV=1	[more]

BLAST of Csa4G000630 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWC0_CUCSA	1.2e-113	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000630 PE=4 SV=1	[more]
E5GBH2_CUCME	1.2e-97	89.11	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
B9S802_RICCO	3.2e-58	75.00	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1383260 PE=4 SV=1	[more]
M5VHY7_PRUPE	3.2e-58	70.89	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb017205mg PE=4 SV=1	[more]
M5W4D9_PRUPE	3.0e-56	72.92	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012811mg PE=4 SV=1	[more]

BLAST of Csa4G000630 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14660.1	4.4e-51	63.06	unknown protein	[more]

BLAST of Csa4G000630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778689136\|ref\|XP_004150262.2\|	1.7e-113	100.00	PREDICTED: thymocyte nuclear protein 1 [Cucumis sativus]	[more]
gi\|659108843\|ref\|XP_008454415.1\|	1.7e-97	89.11	PREDICTED: thymocyte nuclear protein 1 [Cucumis melo]	[more]
gi\|255562220\|ref\|XP_002522118.1\|	4.6e-58	75.00	PREDICTED: thymocyte nuclear protein 1 [Ricinus communis]	[more]
gi\|595791543\|ref\|XP_007199520.1\|	4.6e-58	70.89	hypothetical protein PRUPE_ppb017205mg [Prunus persica]	[more]
gi\|694414231\|ref\|XP_009335344.1\|	5.9e-58	70.99	PREDICTED: thymocyte nuclear protein 1 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002740	EVE_domain
IPR015947	PUA-like_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU114739	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa4G000630.1	Csa4G000630.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU114739	CU114739	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002740	EVE domain	GENE3D	G3DSA:3.10.590.10		coord: 57..186 score: 7.8
IPR002740	EVE domain	PFAM	PF01878	EVE	coord: 57..186 score: 1.5
IPR015947	PUA-like domain	unknown	SSF88697	PUA domain-like	coord: 54..188 score: 2.4
None	No IPR available	PANTHER	PTHR14087	FAMILY NOT NAMED	coord: 50..203 score: 1.2
None	No IPR available	PANTHER	PTHR14087:SF9	SUBFAMILY NOT NAMED	coord: 50..203 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa4G000630	Cla006451	Watermelon (97103) v1	cuwmB290
Csa4G000630	MELO3C018021	Melon (DHL92) v3.5.1	cumeB312
Csa4G000630	ClCG10G010070	Watermelon (Charleston Gray)	cuwcgB271
Csa4G000630	MELO3C018021.2	Melon (DHL92) v3.6.1	cumedB297
Csa4G000630	Cla97C10G193070	Watermelon (97103) v2	cuwmbB271
Csa4G000630	Bhi11G000917	Wax gourd	cuwgoB356
Csa4G000630	CSPI04G00140	Wild cucumber (PI 183967)	cpicuB182
Csa4G000630	Cucsa.298450	Cucumber (Gy14) v1	cgycuB423
Csa4G000630	CmaCh04G004370	Cucurbita maxima (Rimu)	cmacuB709
Csa4G000630	CmoCh04G004670	Cucurbita moschata (Rifu)	cmocuB701
Csa4G000630	CsGy4G000150	Cucumber (Gy14) v2	cgybcuB165
Csa4G000630	Carg08110	Silver-seed gourd	carcuB0402

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa4G000630	Cucumber (Chinese Long) v2	cucuB135
Csa4G000630	Cucumber (Chinese Long) v2	cucuB152
Csa4G000630	Cucumber (Gy14) v1	cgycuB495
Csa4G000630	Cucurbita maxima (Rimu)	cmacuB333
Csa4G000630	Cucurbita moschata (Rifu)	cmocuB322
Csa4G000630	Cucurbita pepo (Zucchini)	cpecuB219
Csa4G000630	Cucurbita pepo (Zucchini)	cpecuB402
Csa4G000630	Bottle gourd (USVL1VR-Ls)	culsiB275
Csa4G000630	Cucumber (Gy14) v2	cgybcuB176
Csa4G000630	Silver-seed gourd	carcuB0322
Csa4G000630	Watermelon (97103) v2	cuwmbB289