MELO3C011749.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C011749.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionthioredoxin-like protein YLS8
Locationchr10 : 5206873 .. 5209531 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGCACAGGTGCACAAAATAACTGTATTATTACCCTTCAAGCTAATGGTAGAATCGGAAGGAGATACAAGATAACACGTGGAGCGATAAGATTGGAAGTATGGTAGCTTTTGGAAGTTTCCAAACTCTTCCAGAGGCTTCTTCCACTCTCGCAGTTTACCTTATAAAGATTCTTCCGTTTAAAACTCAGCGAACTTCCCTTCGTTCTTCACAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGACGAGGAGGAGAGAAATTGGAGAAACTAGGGTTTGAAGATGTCGTACCTTCTACCGCATTTGCATTCAGGATGGGCTGTGGATCAAGCCATTCTCGCTGAAGAAGAACGTGTCGTCATCATCCGTTTCGGCCATGATTGGGACGACACCTGTATGCAGGTAAACCTCATTTTTCAATCCTTAACTCTTCTTCTTCTTCTACTCTCCATTTCACTTTTGTTGTGCCCATTCTGTTTGCTGATCGAAAAACCGAGGAGGAAAGAGAAAAAAAAGAATTGTTTCATTGTGGTTAAATTATTATTTTCTTTGTATTCATTCCACTTTTAGTTTTTAGTTCAAGATCACGTTTTAATTTCAATAAAAAAACACTTTTCCTAAATTCTGAACTAATAATTGTATAAATTATGTAGCTGTGTCAATTTAAACCCTTCTCTACATGACTAATATTGACTTAATTAAACTCTGAAGTTTTCATAAGTCTATTAATCTAGATCTTTCATTAGCGTTACTTTTGAAAATCATCTACCCATTCATGTTTAAATGGGTAGACTTCTTCAAATGCTAGATTTTCAAAATGGATGGTTAGGTAATTGCATGCACAATTCTCACCGAAATTTTGAATTATAGTATAAGTTCATTTATGAAAGTTTAGTGGTTTAATTGACAGTTTTACCCACGATTTTTCTAGATTCAGTGTAATAGGCGGTGTAAATTGACGCACTTAGTCTAGATTTTAATTGGCACAACATTAATATTTTTCCATCTTCGAATTGAAGAAAAAATCTCAACCAAATTTCTTTAGAAAGTAAAGGGACCAAGTTTAGTTCTAAGTTCAGTTTGCTTTATGCTCGTTTGTGTTTTACATCCAATTTTGTGCTTAATAAGTTTTAAAAACCTAAAATCCGTCTGGCTTCTATTTCCATTTCAATTTTATGTGTAATAGATTATGTAATTTTTTATTTTTCTTTTAAATTGTCTTTGATTTTTTAATATTTTCTTTAGCATTCAAGTTTAAATTTTTATTAAATATGACAATTTAAATTTGTATCTACTAGATTAATTGTTTGTTTTCAAAAATAAATTTGAATTCCCGTAGAAAATGTTATTTAACTGCGAGTTAAAATTGTTGACTAAATTACTGGTGAATAGGAATAAAACAGACCGAAGAAACCCTGGAGCCCATTTTCCGTCCTTCAACCAACCTCCTACGATTTGGGCCGAAGAGTTGTTTGTGTATATCTCTCTCTCAACTTCCTTTTTCTTCTTCTTGCTTTTACTGCAACTGAATTTATTCTTTAATGTCTTTTCATCTTTTTTTAGTTCTTCAAGTTCTGATGTCTAGGTTGGTTAATGTTTTTCTTGTTCCCCTCTTTCTTTTTGTATTTTTCTCATCTGGGTTGGAGCTTTGAACATTCACTTGCTCGAATTGATCAGACTTCTCAACTTGAACAATGAGTGATGTTTTCTTAACTTGAATAAGTGTAAAACTTCAATTTTTTAGGCAATTCTAGTGGTTCTATGTTAGATTTCATACCTTTCTCTCAGTTTCCATTTTGTTTCTATTTATCTTTTAGGACTTATTTTGTTTAACTAGGGCCCTTCTTAGAGTTGTTGAACTTTTCTTGGGTCGTATTATTCCATTTATTCTTAATGAAGGCATAGCGTTTTATTTTATTTTATTTTTTGAAAAACCTTCTTCTATTCATTTGTAATTTATCCTATCTCCTCGTTGCCTGTGTTCACTTCTCTGTTATCTTCTGTTTTAAGTATGATTCTTTATCATTTCTCGAGATGCTTGATCTGATTGATATGTTTTTTTGATGTAGATGGATGAAGTGTTGGCCTCAGTTGCGGAGACAATTAAGAACTTTGCAGTAATATACCTTGTGGATATCACAGAAGTTCCTGATTTCAACACAATGTATGAACTGTATGATCCTTCCACCGTCATGTTCTTCTTTAGGAACAAGCACATAATGATTGATCTTGGTACTGGGAACAACAATAAGATAAATTGGGCACTCAAGGATAAACAAGAGTTCATTGATATTGTTGAAACAGTTTATCGTGGAGCAAGGAAAGGACGTGGTTTAGTCATTGCACCTAAGGATTATTCAACCAAATATCGCTACTAGGACATTTTGCTGCTTGTGCAAGCTCTTATTGATTTTAGATTTAAGAAATTGCATCTAAACAATCTCTCTGTATGACATCTGCTTTGTTTGGATGGCATATAATTCTTCATGACATATGTTCTCCTATTCAAGGATTATGTTTTCTTCATGACATATGTTCTCCTATTCAAGGATTATGTAGTGGATTATAATAGTTGGTCGAAACGACCAGTGAACTACATGTCATGTATATAAAAGGGTATAATGTAAAGTTCGTTCACCTTTTCTC

mRNA sequence

AGGCACAGGTGCACAAAATAACTGTATTATTACCCTTCAAGCTAATGGTAGAATCGGAAGGAGATACAAGATAACACGTGGAGCGATAAGATTGGAAGTATGGTAGCTTTTGGAAGTTTCCAAACTCTTCCAGAGGCTTCTTCCACTCTCGCAGTTTACCTTATAAAGATTCTTCCGTTTAAAACTCAGCGAACTTCCCTTCGTTCTTCACAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGACGAGGAGGAGAGAAATTGGAGAAACTAGGGTTTGAAGATGTCGTACCTTCTACCGCATTTGCATTCAGGATGGGCTGTGGATCAAGCCATTCTCGCTGAAGAAGAACGTGTCGTCATCATCCGTTTCGGCCATGATTGGGACGACACCTGTATGCAGGAATAAAACAGACCGAAGAAACCCTGGAGCCCATTTTCCGTCCTTCAACCAACCTCCTACGATTTGGGCCGAAGAGTTGTTTGTATGGATGAAGTGTTGGCCTCAGTTGCGGAGACAATTAAGAACTTTGCAGTAATATACCTTGTGGATATCACAGAAGTTCCTGATTTCAACACAATGTATGAACTGTATGATCCTTCCACCGTCATGTTCTTCTTTAGGAACAAGCACATAATGATTGATCTTGGTACTGGGAACAACAATAAGATAAATTGGGCACTCAAGGATAAACAAGAGTTCATTGATATTGTTGAAACAGTTTATCGTGGAGCAAGGAAAGGACGTGGTTTAGTCATTGCACCTAAGGATTATTCAACCAAATATCGCTACTAGGACATTTTGCTGCTTGTGCAAGCTCTTATTGATTTTAGATTTAAGAAATTGCATCTAAACAATCTCTCTGTATGACATCTGCTTTGTTTGGATGGCATATAATTCTTCATGACATATGTTCTCCTATTCAAGGATTATGTTTTCTTCATGACATATGTTCTCCTATTCAAGGATTATGTAGTGGATTATAATAGTTGGTCGAAACGACCAGTGAACTACATGTCATGTATATAAAAGGGTATAATGTAAAGTTCGTTCACCTTTTCTC

Coding sequence (CDS)

ATGGATGAAGTGTTGGCCTCAGTTGCGGAGACAATTAAGAACTTTGCAGTAATATACCTTGTGGATATCACAGAAGTTCCTGATTTCAACACAATGTATGAACTGTATGATCCTTCCACCGTCATGTTCTTCTTTAGGAACAAGCACATAATGATTGATCTTGGTACTGGGAACAACAATAAGATAAATTGGGCACTCAAGGATAAACAAGAGTTCATTGATATTGTTGAAACAGTTTATCGTGGAGCAAGGAAAGGACGTGGTTTAGTCATTGCACCTAAGGATTATTCAACCAAATATCGCTACTAG

Protein sequence

MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Homology
[Close]
BLAST of MELO3C011749.2 vs. NCBI nr
Match: AAP85544.1 (putative DIM-like protein, partial [Glycine max])

HSP 1 Score: 209.5 bits (532), Expect = 5.2e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 36  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 95

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 96  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 137

[Close]
BLAST of MELO3C011749.2 vs. NCBI nr
Match: ABF70077.1 (spliceosomal U5 snRNP-specific 15 kDa protein, putative [Musa acuminata])

HSP 1 Score: 209.5 bits (532), Expect = 5.2e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 90  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 149

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 150 KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 191

[Close]
BLAST of MELO3C011749.2 vs. NCBI nr
Match: NP_001341033.1 (DIM 1-like protein [Glycine max] >XP_002310072.1 thioredoxin-like protein YLS8 isoform X1 [Populus trichocarpa] >XP_002283622.1 PREDICTED: thioredoxin-like protein YLS8 [Vitis vinifera] >XP_002529724.1 thioredoxin-like protein YLS8 [Ricinus communis] >XP_003554015.1 thioredoxin-like protein YLS8 [Glycine max] >XP_007043276.1 PREDICTED: thioredoxin-like protein YLS8 isoform X1 [Theobroma cacao] >XP_009407394.1 PREDICTED: thioredoxin-like protein YLS8 [Musa acuminata subsp. malaccensis] >XP_009413118.1 PREDICTED: thioredoxin-like protein YLS8 [Musa acuminata subsp. malaccensis] >XP_010067004.1 PREDICTED: thioredoxin-like protein YLS8 isoform X1 [Eucalyptus grandis] >XP_010274887.1 PREDICTED: thioredoxin-like protein YLS8 [Nelumbo nucifera] >XP_011002244.1 PREDICTED: thioredoxin-like protein YLS8 isoform X1 [Populus euphratica] >XP_011002246.1 PREDICTED: thioredoxin-like protein YLS8 isoform X1 [Populus euphratica] >XP_012066576.1 thioredoxin-like protein YLS8 [Jatropha curcas] >XP_020202007.1 thioredoxin-like protein YLS8 [Cajanus cajan] >XP_020524920.1 thioredoxin-like protein YLS8 [Amborella trichopoda] >XP_021294002.1 thioredoxin-like protein YLS8 [Herrania umbratica] >XP_022743304.1 thioredoxin-like protein YLS8 [Durio zibethinus] >XP_022726013.1 thioredoxin-like protein YLS8 [Durio zibethinus] >ABK94150.1 unknown [Populus trichocarpa] >EEF32653.1 mitosis protein dim1, putative [Ricinus communis] >ACU14946.1 unknown [Glycine max] >CBI26324.3 unnamed protein product, partial [Vitis vinifera] >EOX99107.1 MRNA splicing factor, thioredoxin-like U5 snRNP isoform 2 [Theobroma cacao] >ERN09427.1 hypothetical protein AMTR_s00029p00063040 [Amborella trichopoda] >KDP42594.1 hypothetical protein JCGZ_24368 [Jatropha curcas] >KHN29583.1 Thioredoxin-like protein 4A [Glycine soja] >KHN34702.1 Thioredoxin-like protein 4A [Glycine soja] >KRG94825.1 hypothetical protein GLYMA_19G111800 [Glycine max] >KRH40889.1 hypothetical protein GLYMA_09G283300 [Glycine max] >KYP40706.1 Thioredoxin-like protein 4A [Cajanus cajan] >GAV72260.1 DIM1 domain-containing protein [Cephalotus follicularis] >OWM90666.1 hypothetical protein CDL15_Pgr020971 [Punica granatum] >PKI34262.1 hypothetical protein CRG98_045361 [Punica granatum] >PNT27585.1 hypothetical protein POPTR_007G072700v3 [Populus trichocarpa] >PNT27586.1 hypothetical protein POPTR_007G072700v3 [Populus trichocarpa] >PNT27587.1 hypothetical protein POPTR_007G072700v3 [Populus trichocarpa] >PON34927.1 Thioredoxin-like protein [Parasponia andersonii] >POO03557.1 Thioredoxin-like protein [Trema orientalis] >RDX77683.1 Thioredoxin-like protein YLS8 [Mucuna pruriens])

HSP 1 Score: 209.5 bits (532), Expect = 5.2e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 41  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 100

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 101 KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 142

[Close]
BLAST of MELO3C011749.2 vs. NCBI nr
Match: KCW65068.1 (hypothetical protein EUGRSUZ_G02580 [Eucalyptus grandis])

HSP 1 Score: 209.5 bits (532), Expect = 5.2e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 216 MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 275

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 276 KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 317

[Close]
BLAST of MELO3C011749.2 vs. NCBI nr
Match: XP_008361905.1 (PREDICTED: thioredoxin-like protein YLS8 isoform X1 [Malus domestica] >XP_009351743.1 PREDICTED: thioredoxin-like protein YLS8 isoform X1 [Pyrus x bretschneideri] >RAL48847.1 hypothetical protein DM860_001167 [Cuscuta australis])

HSP 1 Score: 209.5 bits (532), Expect = 5.2e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 41  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 100

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 101 KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 142

[Close]
BLAST of MELO3C011749.2 vs. TAIR10
Match: AT5G08290.1 (mRNA splicing factor, thioredoxin-like U5 snRNP)

HSP 1 Score: 209.1 bits (531), Expect = 1.2e-54
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 41  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 100

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDI+ETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 101 KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 142

[Close]
BLAST of MELO3C011749.2 vs. TAIR10
Match: AT3G24730.1 (mRNA splicing factor, thioredoxin-like U5 snRNP)

HSP 1 Score: 67.0 bits (162), Expect = 7.6e-12
Identity = 38/96 (39.58%), Postives = 55/96 (57.29%), Query Frame = 0 

Query: 2   DEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYD----PSTVMFFFRNKHIMIDLGTG 61
           DE+LA     +  FA + LVD+ +  D     + +D    PST+ FFF   H+ +D GT 
Sbjct: 50  DEILAKSVRDVSKFAKVALVDV-DSEDVQVYVKYFDITLFPSTI-FFFNAHHMKLDSGTA 109

Query: 62  NNNKINWALKDKQEFIDIVETVYRGARKGRGLVIAP 94
           ++ K   A   KQ+FID+VE +YRGA KG+ +V  P
Sbjct: 110 DHTKWVGAFHIKQDFIDVVEAIYRGAMKGKMIVQCP 143

[Close]
BLAST of MELO3C011749.2 vs. Swiss-Prot
Match: sp|Q9FE62|YLS8_ARATH (Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana OX=3702 GN=YLS8 PE=2 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.2e-53
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 41  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 100

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDI+ETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 101 KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 142

[Close]
BLAST of MELO3C011749.2 vs. Swiss-Prot
Match: sp|P83876|TXN4A_HUMAN (Thioredoxin-like protein 4A OS=Homo sapiens OX=9606 GN=TXNL4A PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.7e-48
Identity = 89/102 (87.25%), Postives = 97/102 (95.10%), Query Frame = 0 

Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVL S+AE +KNFAVIYLVDITEVPDFN MYELYDP TVMFFFRNKHIMIDLGTGNNN
Sbjct: 41  MDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNN 100

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWA++DKQE +DI+ETVYRGARKGRGLV++PKDYSTKYRY
Sbjct: 101 KINWAMEDKQEMVDIIETVYRGARKGRGLVVSPKDYSTKYRY 142

[Close]
BLAST of MELO3C011749.2 vs. Swiss-Prot
Match: sp|P83877|TXN4A_MOUSE (Thioredoxin-like protein 4A OS=Mus musculus OX=10090 GN=Txnl4a PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.7e-48
Identity = 89/102 (87.25%), Postives = 97/102 (95.10%), Query Frame = 0 

Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVL S+AE +KNFAVIYLVDITEVPDFN MYELYDP TVMFFFRNKHIMIDLGTGNNN
Sbjct: 41  MDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNN 100

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWA++DKQE +DI+ETVYRGARKGRGLV++PKDYSTKYRY
Sbjct: 101 KINWAMEDKQEMVDIIETVYRGARKGRGLVVSPKDYSTKYRY 142

[Close]
BLAST of MELO3C011749.2 vs. Swiss-Prot
Match: sp|P87215|DIMI_SCHPO (Mitosis protein dim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dim1 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.5e-41
Identity = 77/101 (76.24%), Postives = 91/101 (90.10%), Query Frame = 0 

Query: 2   DEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNK 61
           DEVL  +AE + N AVIYLVDI EVPDFN MYELYD +T+MFF+RNKH+MIDLGTGNNNK
Sbjct: 42  DEVLYRIAEKVVNMAVIYLVDIDEVPDFNKMYELYDRTTIMFFYRNKHMMIDLGTGNNNK 101

Query: 62  INWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           INW L+DKQE IDI+ET++RGARKG+GLVI+PKDYST++RY
Sbjct: 102 INWPLEDKQEMIDIIETIFRGARKGKGLVISPKDYSTRHRY 142

[Close]
BLAST of MELO3C011749.2 vs. Swiss-Prot
Match: sp|Q553S5|TXN4A_DICDI (Thioredoxin-like protein 4A homolog OS=Dictyostelium discoideum OX=44689 GN=txnl4a PE=3 SV=4)

HSP 1 Score: 161.8 bits (408), Expect = 4.1e-39
Identity = 71/101 (70.30%), Postives = 90/101 (89.11%), Query Frame = 0 

Query: 2   DEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNK 61
           D++LAS+AE +KN AVIY+VDITEVPD N+MYELYD    MFF+RNKHIM+DLGTGNNNK
Sbjct: 33  DDILASIAEKVKNMAVIYVVDITEVPDLNSMYELYDDCPTMFFYRNKHIMVDLGTGNNNK 92

Query: 62  INWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           INWAL +KQ+ IDI+ETVY+GARKG+GLV +P+D+S +Y++
Sbjct: 93  INWALTNKQDMIDIIETVYKGARKGKGLVNSPRDFSPQYKF 133

[Close]
BLAST of MELO3C011749.2 vs. TrEMBL
Match: tr|A0A218Y1B9|A0A218Y1B9_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr020971 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.5e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 41  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 100

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 101 KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 142

[Close]
BLAST of MELO3C011749.2 vs. TrEMBL
Match: tr|A9PCP7|A9PCP7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G072700v3 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.5e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 41  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 100

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 101 KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 142

[Close]
BLAST of MELO3C011749.2 vs. TrEMBL
Match: tr|C6T0C3|C6T0C3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=547722 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.5e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 41  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 100

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 101 KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 142

[Close]
BLAST of MELO3C011749.2 vs. TrEMBL
Match: tr|A0A1S3TAS5|A0A1S3TAS5_VIGRR (thioredoxin-like protein YLS8 OS=Vigna radiata var. radiata OX=3916 GN=LOC106753560 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.5e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 41  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 100

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 101 KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 142

[Close]
BLAST of MELO3C011749.2 vs. TrEMBL
Match: tr|M0RWA0|M0RWA0_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103990055 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.5e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 41  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 100

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 101 KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 142

The following BLAST results are available for this feature:
BLAST of MELO3C011749.2 vs. NCBI nr
Match NameE-valueIdentityDescription
AAP85544.15.2e-51100.00putative DIM-like protein, partial [Glycine max][more]
ABF70077.15.2e-51100.00spliceosomal U5 snRNP-specific 15 kDa protein, putative [Musa acuminata][more]
NP_001341033.15.2e-51100.00DIM 1-like protein [Glycine max] >XP_002310072.1 thioredoxin-like protein YLS8 i... [more]
KCW65068.15.2e-51100.00hypothetical protein EUGRSUZ_G02580 [Eucalyptus grandis][more]
XP_008361905.15.2e-51100.00PREDICTED: thioredoxin-like protein YLS8 isoform X1 [Malus domestica] >XP_009351... [more]
BLAST of MELO3C011749.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G08290.11.2e-5499.02mRNA splicing factor, thioredoxin-like U5 snRNP[more]
AT3G24730.17.6e-1239.58mRNA splicing factor, thioredoxin-like U5 snRNP[more]
BLAST of MELO3C011749.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FE62|YLS8_ARATH2.2e-5399.02Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana OX=3702 GN=YLS8 PE=2 SV=1[more]
sp|P83876|TXN4A_HUMAN1.7e-4887.25Thioredoxin-like protein 4A OS=Homo sapiens OX=9606 GN=TXNL4A PE=1 SV=1[more]
sp|P83877|TXN4A_MOUSE1.7e-4887.25Thioredoxin-like protein 4A OS=Mus musculus OX=10090 GN=Txnl4a PE=1 SV=1[more]
sp|P87215|DIMI_SCHPO1.5e-4176.24Mitosis protein dim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2... [more]
sp|Q553S5|TXN4A_DICDI4.1e-3970.30Thioredoxin-like protein 4A homolog OS=Dictyostelium discoideum OX=44689 GN=txnl... [more]
BLAST of MELO3C011749.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A218Y1B9|A0A218Y1B9_PUNGR3.5e-51100.00Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr020971 PE=4 SV=1[more]
tr|A9PCP7|A9PCP7_POPTR3.5e-51100.00Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G072700v3 PE=... [more]
tr|C6T0C3|C6T0C3_SOYBN3.5e-51100.00Uncharacterized protein OS=Glycine max OX=3847 GN=547722 PE=2 SV=1[more]
tr|A0A1S3TAS5|A0A1S3TAS5_VIGRR3.5e-51100.00thioredoxin-like protein YLS8 OS=Vigna radiata var. radiata OX=3916 GN=LOC106753... [more]
tr|M0RWA0|M0RWA0_MUSAM3.5e-51100.00Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103990... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Vocabulary: Cellular Component
TermDefinition
GO:0046540U4/U6 x U5 tri-snRNP complex
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR004123Dim1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0007033 vacuole organization
biological_process GO:0007067 mitotic nuclear division
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0007030 Golgi organization
biological_process GO:0016197 endosomal transport
biological_process GO:0000902 cell morphogenesis
biological_process GO:0016049 cell growth
cellular_component GO:0005681 spliceosomal complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009536 plastid
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005829 cytosol
cellular_component GO:0046540 U4/U6 x U5 tri-snRNP complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0004527 exonuclease activity
molecular_function GO:0009022 tRNA nucleotidyltransferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C011749.2.1MELO3C011749.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004123Dim1 familySMARTSM01410DIM1_2coord: 1..96
e-value: 4.1E-53
score: 192.4
IPR004123Dim1 familyPFAMPF02966DIM1coord: 1..96
e-value: 1.9E-46
score: 157.0
IPR004123Dim1 familyPIRSFPIRSF017199Dim1coord: 1..102
e-value: 1.4E-52
score: 174.9
IPR004123Dim1 familyPANTHERPTHR12052THIOREDOXIN-LIKE PROTEN 4A, 4Bcoord: 1..101
IPR004123Dim1 familyCDDcd02954DIM1coord: 1..83
e-value: 5.00735E-51
score: 157.842
NoneNo IPR availableGENE3DG3DSA:3.40.30.10coord: 1..102
e-value: 1.1E-51
score: 176.6
NoneNo IPR availablePANTHERPTHR12052:SF5THIOREDOXIN-LIKE PROTEIN 4Acoord: 1..101
IPR036249Thioredoxin-like superfamilySUPERFAMILYSSF52833Thioredoxin-likecoord: 1..97

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C011749.2Csa5G175720Cucumber (Chinese Long) v2cumedB348
MELO3C011749.2CSPI05G08640Wild cucumber (PI 183967)cpimedB350
MELO3C011749.2Cucsa.166160Cucumber (Gy14) v1cgymedB285
MELO3C011749.2CmaCh04G002810Cucurbita maxima (Rimu)cmamedB738
MELO3C011749.2CmaCh04G012520Cucurbita maxima (Rimu)cmamedB739
MELO3C011749.2CmoCh04G013260Cucurbita moschata (Rifu)cmomedB734
MELO3C011749.2CmoCh04G002900Cucurbita moschata (Rifu)cmomedB733
MELO3C011749.2Cp4.1LG01g04290Cucurbita pepo (Zucchini)cpemedB438
MELO3C011749.2Cp4.1LG01g10230Cucurbita pepo (Zucchini)cpemedB436
MELO3C011749.2CsGy5G006030Cucumber (Gy14) v2cgybmedB310
MELO3C011749.2Cla020056Watermelon (97103) v1medwmB070
MELO3C011749.2ClCG02G014070Watermelon (Charleston Gray)medwcgB055
MELO3C011749.2Cla97C02G039800Watermelon (97103) v2medwmbB050
MELO3C011749.2Bhi07G000926Wax gourdmedwgoB072
MELO3C011749.2Carg25683Silver-seed gourdcarmedB0852
MELO3C011749.2Carg02055Silver-seed gourdcarmedB0844
MELO3C011749.2CsaV3_5G006100Cucumber (Chinese Long) v3cucmedB362
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C011749.2Cucurbita maxima (Rimu)cmamedB736
MELO3C011749.2Cucurbita moschata (Rifu)cmomedB732
MELO3C011749.2Cucurbita pepo (Zucchini)cpemedB435
MELO3C011749.2Melon (DHL92) v3.6.1medmedB005
MELO3C011749.2Bottle gourd (USVL1VR-Ls)lsimedB016
MELO3C011749.2Bottle gourd (USVL1VR-Ls)lsimedB297
MELO3C011749.2Silver-seed gourdcarmedB0488