MELO3C011749 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C011749
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Thioredoxin-like protein 4A
Location	chr10 : 5206710 .. 5209375 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGCACAGGTGCACAAAATAACTGTATTATTACCCTTCAAGCTAATGGTAGAATCGGAAGGAGATACAAGATAACACGTGGAGCGATAAGATTGGAAGTATGGTAGCTTTTGGAAGTTTCCAAACTCTTCCAGAGGCTTCTTCCACTCTCGCAGTTTACCTTATAAAGATTCTTCCGTTTAAAACTCAGCGAACTTCCCTTCGTTCTTCACAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGACGAGGAGGAGAGAAATTGGAGAAACTAGGGTTTGAAGATGTCGTACCTTCTACCGCATTTGCATTCAGGATGGGCTGTGGATCAAGCCATTCTCGCTGAAGAAGAACGTGTCGTCATCATCCGTTTCGGCCATGATTGGGACGACACCTGTATGCAGGTAAACCTCATTTTTCAATCCTTAACTCTTCTTCTTCTTCTACTCTCCATTTCACTTTTGTTGTGCCCATTCTGTTTGCTGATCGAAAAACCGAGGAGGAAAGAAGAAAAAAAAGAATTGTTTCATTGTGGTTAAATTATTATTTTCTTTGTATTCATTCCACTTTTAGTTTTTAGTTCAAGATCACGTTTTAATTTCAATAAAAAAAAAACACTTTTCCTAAATTCTGAACTAATAATTGTATAAATTATGTAGCTGTGTCAATTTAAACCCTTCTCTACATGACTAATATTGACTTAATTAAACTCTGAAGTTTTCATAAGTCTATTAATCTAGATCTTTCATTAGCGTTACTTTTGAAAATCATCTACCCATTCATGTTTAAATGGGTAGACTTCTTCAAATGCTAGATTTTCAAAATGGATGGTTAGGTAATTGCATGCACAATTCTCACCGAAATTTTGAATTATAGTATAAGTTCATTTATGAAAGTTTAGTGGTTTAATTGACAGTTTTACCCACGATTTTTCTAGATTCAGTGTAATAGGCGGTGTAAATTGACGCACTTAGTCTAGATTTTAATTGGCACAACATTAATATTTTTCCATCTTCGAATTGAAGAAAAAATCTCAACCAAATTTCTTTAGAAAGTAAAGGGACCAAGTTTAGTTCTAAGTTCAGTTTGCTTTATGCTCGTTTGTGTTTTACATCCAATTTTGTGCTTAATAAGTTTTAAAAACCTAAAATCCGTCTGGCTTCTATTTCCATTTCAATTTTATGTGTAATAGATTATGTAATTTTTTAATTTTTTTCTTTTAAATTGTCTTTGATTTTTTAATATTTTCTTTAGCATTCAAGTTTAAATTTTTATTAAATATGACAATTTAAATTTGTATCTACTAGATTAATTGTTTGTTTTCAAAAATAAATTTGAATTCCCGTAGAAAATGTTATTTAACTGCGAGTTAAAATTGTTGACTAAATTACTGGTGAATAGGAATAAAACAGACCGAAGAAACCCTGGAGCCCATTTTCCGTCCTTCAACCAACCTCCTACGATTTGGGCCGAAGAGTTGTTTGTGTATATCTCTCTCTCAACTTCCTTTTTCTTCTTCTTGCTTTTACTGCAACTGAATTTATTCTTTAATGTCTTTTCATCTTTTTTTAGTTCTTCAAGTTCTGATGTCTAGGTTGGTTAATGTTTTTCTTGTTCCCCTCTTTCTTTTTGTATTTTTCTCATCTGGGTTGGAGCTTTGAACATTCACTTGCTCGAATTGATCAGACTTCTCAACTTGAACAATGAGTGATGTTTTCTTAACTTGAATAAGTGTAAAACTTCAATTTTTTAGGCAATTCTAGTGGTTCTATGTTAGATTTCATACCTTTCTCTCAGTTTCCATTTTGTTTCTATTTATCTTTTAGGACTTATTTTGTTTAACTAGGGCCCTTCTTAGAGTTGTTGAACTTTTCTTGGGTCGTATTATTCCATTTATTCTTAATGAAGGCATAGCGTTTTATTTTATTTTATTTTTTGAAAAACCTTCTTCTATTCATTTGTAATTTATCCTATCTCCTCGTTGCCTGTGTTCACTTCTCTGTTATCTTCTGTTTTAAGTATGATTCTTTATCATTTCTCGAGATGCTTGATCTGATTGATATGTTTTTTTGATGTAGATGGATGAAGTGTTGGCCTCAGTTGCGGAGACAATTAAGAACTTTGCAGTAATATACCTTGTGGATATCACAGAAGTTCCTGATTTCAACACAATGTATGAACTGTATGATCCTTCCACCGTCATGTTCTTCTTTAGGAACAAGCACATAATGATTGATCTTGGTACTGGGAACAACAATAAGATAAATTGGGCACTCAAGGATAAACAAGAGTTCATTGATATTGTTGAAACAGTTTATCGTGGAGCAAGGAAAGGACGTGGTTTAGTCATTGCACCTAAGGATTATTCAACCAAATATCGCTACTAGGACATTTTGCTGCTTGTGCAAGCTCTTATTGATTTTAGATTTAAGAAATTGCATCTAAACAATCTCTCTGTATGACATCTGCTTTGTTTGGATGGCATATAATTCTTCATGACATATGTTCTCCTATTCAAGGATTATGTTTTCTTCATGACATATGTTCTCCTATTCAAGGATTATGTAGTGGATTATAATAGTTGGTCGAAACGACCAGTGAACTACATGTCATGTATATAAAAGGGTATAATGTAAAGTTCGTTCACCTTTTC

mRNA sequence

AGGCACAGGTGCACAAAATAACTGTATTATTACCCTTCAAGCTAATGGTAGAATCGGAAGGAGATACAAGATAACACGTGGAGCGATAAGATTGGAAGTATGGTAGCTTTTGGAAGTTTCCAAACTCTTCCAGAGGCTTCTTCCACTCTCGCAGTTTACCTTATAAAGATTCTTCCGTTTAAAACTCAGCGAACTTCCCTTCGTTCTTCACAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGACGAGGAGGAGAGAAATTGGAGAAACTAGGGTTTGAAGATGTCGTACCTTCTACCGCATTTGCATTCAGGATGGGCTGTGGATCAAGCCATTCTCGCTGAAGAAGAACGTGTCGTCATCATCCGTTTCGGCCATGATTGGGACGACACCTGTATGCAGATGGATGAAGTGTTGGCCTCAGTTGCGGAGACAATTAAGAACTTTGCAGTAATATACCTTGTGGATATCACAGAAGTTCCTGATTTCAACACAATGTATGAACTGTATGATCCTTCCACCGTCATGTTCTTCTTTAGGAACAAGCACATAATGATTGATCTTGGTACTGGGAACAACAATAAGATAAATTGGGCACTCAAGGATAAACAAGAGTTCATTGATATTGTTGAAACAGTTTATCGTGGAGCAAGGAAAGGACGTGGTTTAGTCATTGCACCTAAGGATTATTCAACCAAATATCGCTACTAGGACATTTTGCTGCTTGTGCAAGCTCTTATTGATTTTAGATTTAAGAAATTGCATCTAAACAATCTCTCTGTATGACATCTGCTTTGTTTGGATGGCATATAATTCTTCATGACATATGTTCTCCTATTCAAGGATTATGTTTTCTTCATGACATATGTTCTCCTATTCAAGGATTATGTAGTGGATTATAATAGTTGGTCGAAACGACCAGTGAACTACATGTCATGTATATAAAAGGGTATAATGTAAAGTTCGTTCACCTTTTC

Coding sequence (CDS)

ATGTCGTACCTTCTACCGCATTTGCATTCAGGATGGGCTGTGGATCAAGCCATTCTCGCTGAAGAAGAACGTGTCGTCATCATCCGTTTCGGCCATGATTGGGACGACACCTGTATGCAGATGGATGAAGTGTTGGCCTCAGTTGCGGAGACAATTAAGAACTTTGCAGTAATATACCTTGTGGATATCACAGAAGTTCCTGATTTCAACACAATGTATGAACTGTATGATCCTTCCACCGTCATGTTCTTCTTTAGGAACAAGCACATAATGATTGATCTTGGTACTGGGAACAACAATAAGATAAATTGGGCACTCAAGGATAAACAAGAGTTCATTGATATTGTTGAAACAGTTTATCGTGGAGCAAGGAAAGGACGTGGTTTAGTCATTGCACCTAAGGATTATTCAACCAAATATCGCTACTAG

Protein sequence

MSYLLPHLHSGWAVDQAILAEEERVVIIRFGHDWDDTCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY*

Homology

[Close]

BLAST of MELO3C011749 vs. Swiss-Prot
Match: YLS8_ARATH (Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana GN=YLS8 PE=2 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.2e-53
Identity = 101/102 (99.02%), Postives = 100/102 (98.04%), Query Frame = 1


Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 41  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 100

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDI+ETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 101 KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 142

[Close]

BLAST of MELO3C011749 vs. Swiss-Prot
Match: TXN4A_HUMAN (Thioredoxin-like protein 4A OS=Homo sapiens GN=TXNL4A PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.7e-48
Identity = 89/102 (87.25%), Postives = 95/102 (93.14%), Query Frame = 1


Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVL S+AE +KNFAVIYLVDITEVPDFN MYELYDP TVMFFFRNKHIMIDLGTGNNN
Sbjct: 41  MDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNN 100

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWA++DKQE +DI+ETVYRGARKGRGLV++PKDYSTKYRY
Sbjct: 101 KINWAMEDKQEMVDIIETVYRGARKGRGLVVSPKDYSTKYRY 142

[Close]

BLAST of MELO3C011749 vs. Swiss-Prot
Match: TXN4A_MOUSE (Thioredoxin-like protein 4A OS=Mus musculus GN=Txnl4a PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.7e-48
Identity = 89/102 (87.25%), Postives = 95/102 (93.14%), Query Frame = 1


Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVL S+AE +KNFAVIYLVDITEVPDFN MYELYDP TVMFFFRNKHIMIDLGTGNNN
Sbjct: 41  MDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNN 100

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWA++DKQE +DI+ETVYRGARKGRGLV++PKDYSTKYRY
Sbjct: 101 KINWAMEDKQEMVDIIETVYRGARKGRGLVVSPKDYSTKYRY 142

[Close]

BLAST of MELO3C011749 vs. Swiss-Prot
Match: DIMI_SCHPO (Mitosis protein dim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dim1 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.5e-41
Identity = 77/101 (76.24%), Postives = 89/101 (88.12%), Query Frame = 1


Query: 2   DEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNK 61
           DEVL  +AE + N AVIYLVDI EVPDFN MYELYD +T+MFF+RNKH+MIDLGTGNNNK
Sbjct: 42  DEVLYRIAEKVVNMAVIYLVDIDEVPDFNKMYELYDRTTIMFFYRNKHMMIDLGTGNNNK 101

Query: 62  INWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           INW L+DKQE IDI+ET++RGARKG+GLVI+PKDYST++RY
Sbjct: 102 INWPLEDKQEMIDIIETIFRGARKGKGLVISPKDYSTRHRY 142

[Close]

BLAST of MELO3C011749 vs. Swiss-Prot
Match: TXN4A_DICDI (Thioredoxin-like protein 4A homolog OS=Dictyostelium discoideum GN=txnl4a PE=3 SV=4)

HSP 1 Score: 161.8 bits (408), Expect = 4.1e-39
Identity = 71/101 (70.30%), Postives = 88/101 (87.13%), Query Frame = 1


Query: 2   DEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNK 61
           D++LAS+AE +KN AVIY+VDITEVPD N+MYELYD    MFF+RNKHIM+DLGTGNNNK
Sbjct: 33  DDILASIAEKVKNMAVIYVVDITEVPDLNSMYELYDDCPTMFFYRNKHIMVDLGTGNNNK 92

Query: 62  INWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           INWAL +KQ+ IDI+ETVY+GARKG+GLV +P+D+S +Y++
Sbjct: 93  INWALTNKQDMIDIIETVYKGARKGKGLVNSPRDFSPQYKF 133

[Close]

BLAST of MELO3C011749 vs. TrEMBL
Match: A0A0L9UU99_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g141000 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.9e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1


Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 3   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 62

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 63  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 104

[Close]

BLAST of MELO3C011749 vs. TrEMBL
Match: Q7XJB7_SOYBN (Putative DIM-like protein (Fragment) OS=Glycine max GN=DIM PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.9e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1


Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 36  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 95

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 96  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 137

[Close]

BLAST of MELO3C011749 vs. TrEMBL
Match: A0A061E3B0_THECC (MRNA splicing factor, thioredoxin-like U5 snRNP isoform 2 OS=Theobroma cacao GN=TCM_007721 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.9e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1


Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 41  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 100

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 101 KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 142

[Close]

BLAST of MELO3C011749 vs. TrEMBL
Match: Q1EP80_MUSAC (Spliceosomal U5 snRNP-specific 15 kDa protein, putative OS=Musa acuminata GN=MA4_54B05.16 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.9e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1


Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 90  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 149

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 150 KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 191

[Close]

BLAST of MELO3C011749 vs. TrEMBL
Match: A0A0B2RSC9_GLYSO (Thioredoxin-like protein 4A OS=Glycine soja GN=glysoja_005307 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.9e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1


Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 41  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 100

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 101 KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 142

[Close]

BLAST of MELO3C011749 vs. TAIR10
Match: AT5G08290.1 (AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP)

HSP 1 Score: 209.1 bits (531), Expect = 1.3e-54
Identity = 101/102 (99.02%), Postives = 100/102 (98.04%), Query Frame = 1


Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 41  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 100

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDI+ETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 101 KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 142

[Close]

BLAST of MELO3C011749 vs. TAIR10
Match: AT3G24730.1 (AT3G24730.1 mRNA splicing factor, thioredoxin-like U5 snRNP)

HSP 1 Score: 67.0 bits (162), Expect = 7.7e-12
Identity = 38/96 (39.58%), Postives = 53/96 (55.21%), Query Frame = 1


Query: 2   DEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYD----PSTVMFFFRNKHIMIDLGTG 61
           DE+LA     +  FA + LVD+ +  D     + +D    PST+ FFF   H+ +D GT 
Sbjct: 50  DEILAKSVRDVSKFAKVALVDV-DSEDVQVYVKYFDITLFPSTI-FFFNAHHMKLDSGTA 109

Query: 62  NNNKINWALKDKQEFIDIVETVYRGARKGRGLVIAP 94
           ++ K   A   KQ+FID+VE +YRGA KG+ +V  P
Sbjct: 110 DHTKWVGAFHIKQDFIDVVEAIYRGAMKGKMIVQCP 143

[Close]

BLAST of MELO3C011749 vs. NCBI nr
Match: gi|629099303|gb|KCW65068.1| (hypothetical protein EUGRSUZ_G02580 [Eucalyptus grandis])

HSP 1 Score: 209.5 bits (532), Expect = 2.7e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1


Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 216 MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 275

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 276 KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 317

[Close]

BLAST of MELO3C011749 vs. NCBI nr
Match: gi|920702879|gb|KOM46104.1| (hypothetical protein LR48_Vigan06g141000 [Vigna angularis])

HSP 1 Score: 209.5 bits (532), Expect = 2.7e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1


Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 3   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 62

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 63  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 104

[Close]

BLAST of MELO3C011749 vs. NCBI nr
Match: gi|32493106|gb|AAP85544.1| (putative DIM-like protein [Glycine max])

HSP 1 Score: 209.5 bits (532), Expect = 2.7e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1


Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 36  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 95

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 96  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 137

[Close]

BLAST of MELO3C011749 vs. NCBI nr
Match: gi|743775965|ref|XP_010918377.1| (PREDICTED: thioredoxin-like protein YLS8 [Elaeis guineensis])

HSP 1 Score: 209.5 bits (532), Expect = 2.7e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1


Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 41  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 100

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 101 KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 142

[Close]

BLAST of MELO3C011749 vs. NCBI nr
Match: gi|698503994|ref|XP_009797553.1| (PREDICTED: thioredoxin-like protein YLS8 isoform X1 [Nicotiana sylvestris])

HSP 1 Score: 209.5 bits (532), Expect = 2.7e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1


Query: 1   MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 60
           MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Sbjct: 63  MDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN 122

Query: 61  KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 103
           KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 123 KINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 164

The following BLAST results are available for this feature:

BLAST of MELO3C011749 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YLS8_ARATH	2.2e-53	99.02	Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana GN=YLS8 PE=2 SV=1	[more]
TXN4A_HUMAN	1.7e-48	87.25	Thioredoxin-like protein 4A OS=Homo sapiens GN=TXNL4A PE=1 SV=1	[more]
TXN4A_MOUSE	1.7e-48	87.25	Thioredoxin-like protein 4A OS=Mus musculus GN=Txnl4a PE=1 SV=1	[more]
DIMI_SCHPO	1.5e-41	76.24	Mitosis protein dim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=d...	[more]
TXN4A_DICDI	4.1e-39	70.30	Thioredoxin-like protein 4A homolog OS=Dictyostelium discoideum GN=txnl4a PE=3 S...	[more]

BLAST of MELO3C011749 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0L9UU99_PHAAN	1.9e-51	100.00	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g141000 PE=4 SV=1	[more]
Q7XJB7_SOYBN	1.9e-51	100.00	Putative DIM-like protein (Fragment) OS=Glycine max GN=DIM PE=2 SV=1	[more]
A0A061E3B0_THECC	1.9e-51	100.00	MRNA splicing factor, thioredoxin-like U5 snRNP isoform 2 OS=Theobroma cacao GN=...	[more]
Q1EP80_MUSAC	1.9e-51	100.00	Spliceosomal U5 snRNP-specific 15 kDa protein, putative OS=Musa acuminata GN=MA4...	[more]
A0A0B2RSC9_GLYSO	1.9e-51	100.00	Thioredoxin-like protein 4A OS=Glycine soja GN=glysoja_005307 PE=4 SV=1	[more]

BLAST of MELO3C011749 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08290.1	1.3e-54	99.02	mRNA splicing factor, thioredoxin-like U5 snRNP	[more]
AT3G24730.1	7.7e-12	39.58	mRNA splicing factor, thioredoxin-like U5 snRNP	[more]

BLAST of MELO3C011749 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|629099303\|gb\|KCW65068.1\|	2.7e-51	100.00	hypothetical protein EUGRSUZ_G02580 [Eucalyptus grandis]	[more]
gi\|920702879\|gb\|KOM46104.1\|	2.7e-51	100.00	hypothetical protein LR48_Vigan06g141000 [Vigna angularis]	[more]
gi\|32493106\|gb\|AAP85544.1\|	2.7e-51	100.00	putative DIM-like protein [Glycine max]	[more]
gi\|743775965\|ref\|XP_010918377.1\|	2.7e-51	100.00	PREDICTED: thioredoxin-like protein YLS8 [Elaeis guineensis]	[more]
gi\|698503994\|ref\|XP_009797553.1\|	2.7e-51	100.00	PREDICTED: thioredoxin-like protein YLS8 isoform X1 [Nicotiana sylvestris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004123	Dim1
IPR012336	Thioredoxin-like_fold
IPR004123	Dim1
IPR012336	Thioredoxin-like_fold

Vocabulary: **Biological Process**
Term	Definition
GO:0000398	mRNA splicing, via spliceosome
GO:0000398	mRNA splicing, via spliceosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005681	spliceosomal complex
GO:0005681	spliceosomal complex

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016049	cell growth
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0016197	endosomal transport
biological_process	GO:0007030	Golgi organization
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0007067	mitotic nuclear division
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0007033	vacuole organization
biological_process	GO:0000902	cell morphogenesis
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0009536	plastid
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004527	exonuclease activity
molecular_function	GO:0009022	tRNA nucleotidyltransferase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU50728	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C011749T1	MELO3C011749T1	mRNA
MELO3C011749T2	MELO3C011749T2	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU50728	MU50728	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004123	Dim1 family	PIR	PIRSF017199	Dim1	coord: 1..142 score: 1.8
IPR004123	Dim1 family	PANTHER	PTHR12052	THIOREDOXIN-LIKE PROTEN 4A, 4B	coord: 1..142 score: 2.6E
IPR004123	Dim1 family	PFAM	PF02966	DIM1	coord: 4..136 score: 5.3
IPR004123	Dim1 family	SMART	SM01410	DIM1_2	coord: 4..136 score: 6.5
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 1..142 score: 2.4
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 4..137 score: 1.42

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C011749	Csa5G175720	Cucumber (Chinese Long) v2	cumeB370
MELO3C011749	Cla020056	Watermelon (97103) v1	mewmB071
MELO3C011749	ClCG02G014070	Watermelon (Charleston Gray)	mewcgB056
MELO3C011749	Cla97C02G039800	Watermelon (97103) v2	mewmbB053
MELO3C011749	Bhi07G000926	Wax gourd	mewgoB074
MELO3C011749	CSPI05G08640	Wild cucumber (PI 183967)	cpimeB360
MELO3C011749	Cucsa.166160	Cucumber (Gy14) v1	cgymeB290
MELO3C011749	CmaCh04G012520	Cucurbita maxima (Rimu)	cmameB652
MELO3C011749	CmaCh04G002810	Cucurbita maxima (Rimu)	cmameB654
MELO3C011749	CmoCh04G013260	Cucurbita moschata (Rifu)	cmomeB644
MELO3C011749	CmoCh04G002900	Cucurbita moschata (Rifu)	cmomeB646
MELO3C011749	Cp4.1LG01g04290	Cucurbita pepo (Zucchini)	cpemeB378
MELO3C011749	Cp4.1LG01g10230	Cucurbita pepo (Zucchini)	cpemeB376
MELO3C011749	CsGy5G006030	Cucumber (Gy14) v2	cgybmeB310
MELO3C011749	Carg02055	Silver-seed gourd	carmeB0832
MELO3C011749	Carg25683	Silver-seed gourd	carmeB0841
MELO3C011749	CsaV3_5G006100	Cucumber (Chinese Long) v3	cucmeB370

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C011749	Bottle gourd (USVL1VR-Ls)	lsimeB015
MELO3C011749	Bottle gourd (USVL1VR-Ls)	lsimeB281
MELO3C011749	Silver-seed gourd	carmeB0484
MELO3C011749	Melon (DHL92) v3.5.1	memeB009
MELO3C011749	Cucurbita maxima (Rimu)	cmameB651
MELO3C011749	Cucurbita moschata (Rifu)	cmomeB643