MELO3C007907.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C007907.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionRING-H2 finger protein ATL72-like
Locationchr08 : 6171899 .. 6172471 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTCAGTGGATGATCTCGGTTACAGCAATAGACGCCTTCTTAAAGATTCTTCCTTATTTGAACAACCATTTGGAAACCGAGAAAGAATTGTTACTATATGTGCGACTTCTGCCATTGCAGCCCTGTTTGTAATCTCTTTGTTCATCTCCCTTTTCACCTGCTTTCGGCGCCAACTCAACTCTCCTTCCTCTAAACCTCTCTCATCCACATGTAGCAGCCAGTTACTCACTACCATGCCTGTATATATCTATGGCGATTCGTCTTCAAATATGCCGTCGTCTTATTGTTTTACATCGTTTGAATCCAGGAACTGTGTCATATGTTTGGCGGAGTTTGAGTATGGAGATGAACTCCGTGTTCTGCCTAACTGCAAGCATGTGTTTCATAAAGGTTGCATTGATCAGTGGCTTCCATTGAGGTCGTTGCTTTGCCCACTTTGTCGAGAACATACAATCAAGGAGATTGAGACCATGAGGAGACCCCTTTGTTCAAACTATTGGGCCCGAAATCCTGCCTTCATATTGGCCTTCGGCCTCGGTAGTAATGCCCCACTGCCCTCTCAATTGTAA

mRNA sequence

ATGAATTCAGTGGATGATCTCGGTTACAGCAATAGACGCCTTCTTAAAGATTCTTCCTTATTTGAACAACCATTTGGAAACCGAGAAAGAATTGTTACTATATGTGCGACTTCTGCCATTGCAGCCCTGTTTGTAATCTCTTTGTTCATCTCCCTTTTCACCTGCTTTCGGCGCCAACTCAACTCTCCTTCCTCTAAACCTCTCTCATCCACATGTAGCAGCCAGTTACTCACTACCATGCCTGTATATATCTATGGCGATTCGTCTTCAAATATGCCGTCGTCTTATTGTTTTACATCGTTTGAATCCAGGAACTGTGTCATATGTTTGGCGGAGTTTGAGTATGGAGATGAACTCCGTGTTCTGCCTAACTGCAAGCATGTGTTTCATAAAGGTTGCATTGATCAGTGGCTTCCATTGAGGTCGTTGCTTTGCCCACTTTGTCGAGAACATACAATCAAGGAGATTGAGACCATGAGGAGACCCCTTTGTTCAAACTATTGGGCCCGAAATCCTGCCTTCATATTGGCCTTCGGCCTCGGTAGTAATGCCCCACTGCCCTCTCAATTGTAA

Coding sequence (CDS)

ATGAATTCAGTGGATGATCTCGGTTACAGCAATAGACGCCTTCTTAAAGATTCTTCCTTATTTGAACAACCATTTGGAAACCGAGAAAGAATTGTTACTATATGTGCGACTTCTGCCATTGCAGCCCTGTTTGTAATCTCTTTGTTCATCTCCCTTTTCACCTGCTTTCGGCGCCAACTCAACTCTCCTTCCTCTAAACCTCTCTCATCCACATGTAGCAGCCAGTTACTCACTACCATGCCTGTATATATCTATGGCGATTCGTCTTCAAATATGCCGTCGTCTTATTGTTTTACATCGTTTGAATCCAGGAACTGTGTCATATGTTTGGCGGAGTTTGAGTATGGAGATGAACTCCGTGTTCTGCCTAACTGCAAGCATGTGTTTCATAAAGGTTGCATTGATCAGTGGCTTCCATTGAGGTCGTTGCTTTGCCCACTTTGTCGAGAACATACAATCAAGGAGATTGAGACCATGAGGAGACCCCTTTGTTCAAACTATTGGGCCCGAAATCCTGCCTTCATATTGGCCTTCGGCCTCGGTAGTAATGCCCCACTGCCCTCTCAATTGTAA

Protein sequence

MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQLNSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGLGSNAPLPSQL
Homology
[Close]
BLAST of MELO3C007907.2 vs. NCBI nr
Match: XP_008440820.1 (PREDICTED: RING-H2 finger protein ATL72-like [Cucumis melo])

HSP 1 Score: 393.7 bits (1010), Expect = 3.7e-106
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0 

Query: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60
           MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL
Sbjct: 11  MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 70

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120
           NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR
Sbjct: 71  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 130

Query: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 180
           VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL
Sbjct: 131 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 190

Query: 181 GSNAPLPSQL 191
           GSNAPLPSQL
Sbjct: 191 GSNAPLPSQL 200

[Close]
BLAST of MELO3C007907.2 vs. NCBI nr
Match: KGN48917.1 (hypothetical protein Csa_6G505940 [Cucumis sativus])

HSP 1 Score: 382.9 bits (982), Expect = 6.4e-103
Identity = 186/190 (97.89%), Postives = 188/190 (98.95%), Query Frame = 0 

Query: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60
           MNSVDDLGYSNRRLLKD SLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL
Sbjct: 24  MNSVDDLGYSNRRLLKD-SLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 83

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120
           NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESR CVICLAEFEYGDELR
Sbjct: 84  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRTCVICLAEFEYGDELR 143

Query: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 180
           VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRP+CSNYW+RNPAFILAFGL
Sbjct: 144 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPVCSNYWSRNPAFILAFGL 203

Query: 181 GSNAPLPSQL 191
           GSNAPLPSQL
Sbjct: 204 GSNAPLPSQL 212

[Close]
BLAST of MELO3C007907.2 vs. NCBI nr
Match: XP_011658497.1 (PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Cucumis sativus])

HSP 1 Score: 382.9 bits (982), Expect = 6.4e-103
Identity = 186/190 (97.89%), Postives = 188/190 (98.95%), Query Frame = 0 

Query: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60
           MNSVDDLGYSNRRLLKD SLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL
Sbjct: 1   MNSVDDLGYSNRRLLKD-SLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120
           NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESR CVICLAEFEYGDELR
Sbjct: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRTCVICLAEFEYGDELR 120

Query: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 180
           VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRP+CSNYW+RNPAFILAFGL
Sbjct: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPVCSNYWSRNPAFILAFGL 180

Query: 181 GSNAPLPSQL 191
           GSNAPLPSQL
Sbjct: 181 GSNAPLPSQL 189

[Close]
BLAST of MELO3C007907.2 vs. NCBI nr
Match: XP_022950353.1 (RING-H2 finger protein ATL74-like [Cucurbita moschata])

HSP 1 Score: 284.3 bits (726), Expect = 3.1e-73
Identity = 144/193 (74.61%), Postives = 160/193 (82.90%), Query Frame = 0 

Query: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60
           MNS    GY+ RRLLKD SL ++PFG+ ER+VTIC  SAIAA FV+SLFISLFTCFRRQL
Sbjct: 1   MNSAQAPGYTYRRLLKD-SLLQRPFGHHERLVTICVVSAIAAAFVLSLFISLFTCFRRQL 60

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFT---SFESRNCVICLAEFEYGD 120
            S SSKP SSTCS Q L++MPVYIYGDS     + YCFT   SFE+RNCVICLAEFE GD
Sbjct: 61  TSASSKPPSSTCSRQ-LSSMPVYIYGDS-----APYCFTSSSSFEARNCVICLAEFELGD 120

Query: 121 ELRVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILA 180
           ELRVLPNCKH FHKGCIDQWLPLRSLLCPLCRE +I EI TMR+P+C+N+WARNPAF+LA
Sbjct: 121 ELRVLPNCKHAFHKGCIDQWLPLRSLLCPLCRELSIDEIGTMRKPVCTNHWARNPAFVLA 180

Query: 181 FGLGSNAPLPSQL 191
           F   SNAPLPSQL
Sbjct: 181 FAPASNAPLPSQL 186

[Close]
BLAST of MELO3C007907.2 vs. NCBI nr
Match: XP_022977281.1 (RING-H2 finger protein ATL74-like [Cucurbita maxima])

HSP 1 Score: 280.0 bits (715), Expect = 5.9e-72
Identity = 142/192 (73.96%), Postives = 156/192 (81.25%), Query Frame = 0 

Query: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60
           MNS    GY+ RRLLKD SL ++PFG+ ER+VTIC  SAIAA FV+SLFISLFTCFRRQL
Sbjct: 1   MNSAQAPGYTYRRLLKD-SLLQRPFGHHERLVTICVVSAIAAAFVLSLFISLFTCFRRQL 60

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFT--SFESRNCVICLAEFEYGDE 120
            S SSKP SSTCS Q L++MPVYIYGDS     + YCFT  SFE RNCVICL EFE GDE
Sbjct: 61  TSASSKPPSSTCSRQ-LSSMPVYIYGDS-----APYCFTSSSFEVRNCVICLGEFELGDE 120

Query: 121 LRVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAF 180
           LRVLPNC H FHKGCIDQWLPLRSLLCPLCRE +  EI TMR+P+C+NYWARNPAF+LAF
Sbjct: 121 LRVLPNCNHAFHKGCIDQWLPLRSLLCPLCRELSTDEIGTMRKPVCTNYWARNPAFVLAF 180

Query: 181 GLGSNAPLPSQL 191
              SNAPLPSQL
Sbjct: 181 APASNAPLPSQL 185

[Close]
BLAST of MELO3C007907.2 vs. TAIR10
Match: AT1G63840.1 (RING/U-box superfamily protein)

HSP 1 Score: 68.9 bits (167), Expect = 3.7e-12
Identity = 31/77 (40.26%), Postives = 44/77 (57.14%), Query Frame = 0 

Query: 80  MPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGCIDQW-L 139
           +PV  + D   N P S C        C +CL +FE  DE+R L NC+H+FH+GC+D+W +
Sbjct: 73  LPVVRFSD--INRPESEC--------CAVCLYDFENDDEIRRLTNCRHIFHRGCLDRWMM 132

Query: 140 PLRSLLCPLCREHTIKE 156
               + CPLCR   I +
Sbjct: 133 GYNQMTCPLCRTQFIPD 139

[Close]
BLAST of MELO3C007907.2 vs. TAIR10
Match: AT3G10910.1 (RING/U-box superfamily protein)

HSP 1 Score: 68.9 bits (167), Expect = 3.7e-12
Identity = 34/81 (41.98%), Postives = 46/81 (56.79%), Query Frame = 0 

Query: 75  QLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGCI 134
           Q L  +PV +YG    +M         ++  C+ICL +FE G+++RVLP C H FH  CI
Sbjct: 92  QALKQIPVGLYGSGIIDM---------KATECLICLGDFEDGEKVRVLPKCNHGFHVRCI 151

Query: 135 DQWLPLRSLLCPLCREHTIKE 156
           D WL  RS  CP CR+  + E
Sbjct: 152 DTWLLSRS-SCPTCRQSLLLE 162

[Close]
BLAST of MELO3C007907.2 vs. TAIR10
Match: AT2G27940.1 (RING/U-box superfamily protein)

HSP 1 Score: 68.6 bits (166), Expect = 4.9e-12
Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 0 

Query: 74  SQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGC 133
           SQ + ++PVY Y  ++             + +CVICL++FE G+ ++V+P+C HVFH  C
Sbjct: 118 SQAVRSLPVYRYTKAAKQ----------RNEDCVICLSDFEEGETVKVIPHCGHVFHVDC 177

Query: 134 IDQWLPLRSLLCPLCREHTI 154
           +D WL    + CPLCR + +
Sbjct: 178 VDTWLS-SYVTCPLCRSNQL 186

[Close]
BLAST of MELO3C007907.2 vs. TAIR10
Match: AT3G62690.1 (AtL5)

HSP 1 Score: 68.2 bits (165), Expect = 6.4e-12
Identity = 37/89 (41.57%), Postives = 46/89 (51.69%), Query Frame = 0 

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120
           +S S  PL  T    +L  +P+++Y   +   P            C +CL+EFE  DE R
Sbjct: 81  SSSSLSPLDPT----VLEKIPIFVYSVKTHESP---------LEECSVCLSEFEEDDEGR 140

Query: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCR 150
           VLP C HVFH  CID W   RS  CPLCR
Sbjct: 141 VLPKCGHVFHVDCIDTWFRSRS-SCPLCR 155

[Close]
BLAST of MELO3C007907.2 vs. TAIR10
Match: AT1G23980.1 (RING/U-box superfamily protein)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11
Identity = 31/74 (41.89%), Postives = 41/74 (55.41%), Query Frame = 0 

Query: 76  LLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGCID 135
           L+  +PV++Y +              E  +C +CL EF   D+LR+LPNC H FH  CID
Sbjct: 123 LIDALPVFLYKEIKGTK---------EPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCID 182

Query: 136 QWLPLRSLLCPLCR 150
            WL L +  CPLCR
Sbjct: 183 TWL-LSNSTCPLCR 186

[Close]
BLAST of MELO3C007907.2 vs. Swiss-Prot
Match: sp|Q8H7N9|ATL31_ORYSJ (E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0188200 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.7e-11
Identity = 33/75 (44.00%), Postives = 42/75 (56.00%), Query Frame = 0 

Query: 75  QLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGCI 134
           +++   P  +YGD  + M +           C +CLAEF   DELRVLP C HVFH  CI
Sbjct: 107 EVVEAFPTAVYGDVKARMAA-----KSGPLECAVCLAEFADSDELRVLPACCHVFHPDCI 166

Query: 135 DQWLPLRSLLCPLCR 150
           D WL   ++ CPLCR
Sbjct: 167 DPWL-AAAVTCPLCR 175

[Close]
BLAST of MELO3C007907.2 vs. Swiss-Prot
Match: sp|Q9SG96|ATL72_ARATH (RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.7e-11
Identity = 34/81 (41.98%), Postives = 46/81 (56.79%), Query Frame = 0 

Query: 75  QLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGCI 134
           Q L  +PV +YG    +M         ++  C+ICL +FE G+++RVLP C H FH  CI
Sbjct: 92  QALKQIPVGLYGSGIIDM---------KATECLICLGDFEDGEKVRVLPKCNHGFHVRCI 151

Query: 135 DQWLPLRSLLCPLCREHTIKE 156
           D WL  RS  CP CR+  + E
Sbjct: 152 DTWLLSRS-SCPTCRQSLLLE 162

[Close]
BLAST of MELO3C007907.2 vs. Swiss-Prot
Match: sp|Q9SJJ7|ATL57_ARATH (RING-H2 finger protein ATL57 OS=Arabidopsis thaliana OX=3702 GN=ATL57 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 8.8e-11
Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 0 

Query: 74  SQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGC 133
           SQ + ++PVY Y  ++             + +CVICL++FE G+ ++V+P+C HVFH  C
Sbjct: 118 SQAVRSLPVYRYTKAAKQ----------RNEDCVICLSDFEEGETVKVIPHCGHVFHVDC 177

Query: 134 IDQWLPLRSLLCPLCREHTI 154
           +D WL    + CPLCR + +
Sbjct: 178 VDTWLS-SYVTCPLCRSNQL 186

[Close]
BLAST of MELO3C007907.2 vs. Swiss-Prot
Match: sp|Q9LZJ6|ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.1e-10
Identity = 37/89 (41.57%), Postives = 46/89 (51.69%), Query Frame = 0 

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120
           +S S  PL  T    +L  +P+++Y   +   P            C +CL+EFE  DE R
Sbjct: 81  SSSSLSPLDPT----VLEKIPIFVYSVKTHESP---------LEECSVCLSEFEEDDEGR 140

Query: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCR 150
           VLP C HVFH  CID W   RS  CPLCR
Sbjct: 141 VLPKCGHVFHVDCIDTWFRSRS-SCPLCR 155

[Close]
BLAST of MELO3C007907.2 vs. Swiss-Prot
Match: sp|Q8GW38|ATL47_ARATH (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-10
Identity = 31/74 (41.89%), Postives = 41/74 (55.41%), Query Frame = 0 

Query: 76  LLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGCID 135
           L+  +PV++Y +              E  +C +CL EF   D+LR+LPNC H FH  CID
Sbjct: 123 LIDALPVFLYKEIKGTK---------EPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCID 182

Query: 136 QWLPLRSLLCPLCR 150
            WL L +  CPLCR
Sbjct: 183 TWL-LSNSTCPLCR 186

[Close]
BLAST of MELO3C007907.2 vs. TrEMBL
Match: tr|A0A1S3B2S4|A0A1S3B2S4_CUCME (RING-H2 finger protein ATL72-like OS=Cucumis melo OX=3656 GN=LOC103485128 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.4e-106
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0 

Query: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60
           MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL
Sbjct: 11  MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 70

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120
           NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR
Sbjct: 71  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 130

Query: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 180
           VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL
Sbjct: 131 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 190

Query: 181 GSNAPLPSQL 191
           GSNAPLPSQL
Sbjct: 191 GSNAPLPSQL 200

[Close]
BLAST of MELO3C007907.2 vs. TrEMBL
Match: tr|A0A0A0KKP7|A0A0A0KKP7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505940 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 4.3e-103
Identity = 186/190 (97.89%), Postives = 188/190 (98.95%), Query Frame = 0 

Query: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60
           MNSVDDLGYSNRRLLKD SLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL
Sbjct: 24  MNSVDDLGYSNRRLLKD-SLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 83

Query: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120
           NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESR CVICLAEFEYGDELR
Sbjct: 84  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRTCVICLAEFEYGDELR 143

Query: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 180
           VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRP+CSNYW+RNPAFILAFGL
Sbjct: 144 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPVCSNYWSRNPAFILAFGL 203

Query: 181 GSNAPLPSQL 191
           GSNAPLPSQL
Sbjct: 204 GSNAPLPSQL 212

[Close]
BLAST of MELO3C007907.2 vs. TrEMBL
Match: tr|A0A2N9ICV8|A0A2N9ICV8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49792 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.5e-20
Identity = 58/120 (48.33%), Postives = 74/120 (61.67%), Query Frame = 0 

Query: 74  SQLLTTMPVYIYGDSSSNMPSSYCFTSFE-SRNCVICLAEFEYGDELRVLPNCKHVFHKG 133
           S  L  +P +IY DS S   SS   +S E   NC ICL EF  G+ELRVLP CKH++HK 
Sbjct: 5   SDELAALPKFIYDDSCSASCSSATTSSLEPETNCPICLVEFLRGEELRVLPRCKHIYHKE 64

Query: 134 CIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWA--RNPAFILAFGLGSNAPLPSQL 191
           CIDQWL LRSL CP+CR+ TI+     ++  C+N  A   +P+  LA G  +N P+ S L
Sbjct: 65  CIDQWLVLRSLHCPICRDRTIERDVEPKKSNCTNSGAGLGDPSMSLALGF-ANHPVISNL 123

[Close]
BLAST of MELO3C007907.2 vs. TrEMBL
Match: tr|A0A2I4FDB8|A0A2I4FDB8_9ROSI (RING-H2 finger protein ATL79-like OS=Juglans regia OX=51240 GN=LOC108997721 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 3.2e-18
Identity = 58/158 (36.71%), Postives = 85/158 (53.80%), Query Frame = 0 

Query: 14  LLKDSSLFEQPFGN-RERIVTICATSAIAALFVISLFISL-FTCFRRQLNSPSSKPLSST 73
           ++K S+L  QP     ER +++  T  + A+ + +L + L FTCFRR             
Sbjct: 16  VMKGSALAPQPHVRPPERTISVVITIIVMAMLICTLVVHLIFTCFRRXXXXXXXXXXXXX 75

Query: 74  CSSQL-LTTMPVYIYGDS--SSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHV 133
                 L  +P +IY +   S+   SS   +S     C ICLAEF +G+ LRVLP C H+
Sbjct: 76  XXXXXDLAALPTFIYAEDSVSATCSSSIASSSDSEPICAICLAEFVHGEILRVLPRCNHL 135

Query: 134 FHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSN 167
           +HK CIDQWL + SL CP+CR+ TI +    +R  C++
Sbjct: 136 YHKECIDQWLVVGSLSCPICRDRTIDQDVEPKRSRCTH 173

[Close]
BLAST of MELO3C007907.2 vs. TrEMBL
Match: tr|A0A061DFR3|A0A061DFR3_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_000202 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.7e-14
Identity = 57/167 (34.13%), Postives = 83/167 (49.70%), Query Frame = 0 

Query: 30  RIVTICATSAIAALFVISLFISLFTCFRRQLNSPSSKPLSSTCSSQLLTTMPVYIYGDSS 89
           RIV     + I+   ++ L    F    R  N  +  P + +   + L ++P  +Y +S+
Sbjct: 35  RIVVTTMAATISLCLIVLLICKCFHLSNRSRNPTNVNPRAPSIDDE-LASIPALVYAEST 94

Query: 90  --SNMPSSYCFTSFE-SRNCVICLAEFEYGDELRVLPNCKHVFHKGCIDQWLPLRSLLCP 149
             S+ PS     S E   +C ICL  + +GD + VLP CKH+FHK CI++WL + SL CP
Sbjct: 95  LWSSQPSCSDDDSLELEEHCAICLEGYVHGDSVSVLPRCKHMFHKKCIEEWLQVPSLHCP 154

Query: 150 LCREHTIKEIETMRRPLCSNY--WARNPAFILAFGLGSNAPL-PSQL 191
           +CR+  ++      R    N      NP   LAF LG N  L PS L
Sbjct: 155 ICRDQILERCLQSTRSNGRNQRDGIANPFPSLAFNLGGNYALYPSVL 200

The following BLAST results are available for this feature:
BLAST of MELO3C007907.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008440820.13.7e-106100.00PREDICTED: RING-H2 finger protein ATL72-like [Cucumis melo][more]
KGN48917.16.4e-10397.89hypothetical protein Csa_6G505940 [Cucumis sativus][more]
XP_011658497.16.4e-10397.89PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Cucumis sativus][more]
XP_022950353.13.1e-7374.61RING-H2 finger protein ATL74-like [Cucurbita moschata][more]
XP_022977281.15.9e-7273.96RING-H2 finger protein ATL74-like [Cucurbita maxima][more]
BLAST of MELO3C007907.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G63840.13.7e-1240.26RING/U-box superfamily protein[more]
AT3G10910.13.7e-1241.98RING/U-box superfamily protein[more]
AT2G27940.14.9e-1237.50RING/U-box superfamily protein[more]
AT3G62690.16.4e-1241.57AtL5[more]
AT1G23980.11.1e-1141.89RING/U-box superfamily protein[more]
BLAST of MELO3C007907.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8H7N9|ATL31_ORYSJ6.7e-1144.00E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp. japonica OX=3994... [more]
sp|Q9SG96|ATL72_ARATH6.7e-1141.98RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1[more]
sp|Q9SJJ7|ATL57_ARATH8.8e-1137.50RING-H2 finger protein ATL57 OS=Arabidopsis thaliana OX=3702 GN=ATL57 PE=2 SV=1[more]
sp|Q9LZJ6|ATL5_ARATH1.1e-1041.57RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1[more]
sp|Q8GW38|ATL47_ARATH2.0e-1041.89RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1[more]
BLAST of MELO3C007907.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B2S4|A0A1S3B2S4_CUCME2.4e-106100.00RING-H2 finger protein ATL72-like OS=Cucumis melo OX=3656 GN=LOC103485128 PE=4 S... [more]
tr|A0A0A0KKP7|A0A0A0KKP7_CUCSA4.3e-10397.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505940 PE=4 SV=1[more]
tr|A0A2N9ICV8|A0A2N9ICV8_FAGSY4.5e-2048.33Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49792 PE=4 SV=1[more]
tr|A0A2I4FDB8|A0A2I4FDB8_9ROSI3.2e-1836.71RING-H2 finger protein ATL79-like OS=Juglans regia OX=51240 GN=LOC108997721 PE=4... [more]
tr|A0A061DFR3|A0A061DFR3_THECC1.7e-1434.13Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_000202 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007907.2.1MELO3C007907.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 106..148
e-value: 1.4E-7
score: 41.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 105..149
e-value: 2.4E-13
score: 50.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 106..149
score: 12.032
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 101..153
e-value: 7.7E-18
score: 65.8
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 38..161
NoneNo IPR availableCDDcd16486mRING-H2-C3H2C2D_ZSWM2coord: 105..149
e-value: 9.85515E-16
score: 67.2517
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 105..157

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C007907.2Csa6G505940Cucumber (Chinese Long) v2cumedB483
MELO3C007907.2CSPI06G31810Wild cucumber (PI 183967)cpimedB493
MELO3C007907.2CmaCh03G006830Cucurbita maxima (Rimu)cmamedB703
MELO3C007907.2CmoCh03G007080Cucurbita moschata (Rifu)cmomedB694
MELO3C007907.2Lsi01G005990Bottle gourd (USVL1VR-Ls)lsimedB163
MELO3C007907.2Cp4.1LG10g00230Cucurbita pepo (Zucchini)cpemedB080
MELO3C007907.2Cla014288Watermelon (97103) v1medwmB559
MELO3C007907.2Cla97C01G019750Watermelon (97103) v2medwmbB505
MELO3C007907.2Bhi03G000637Wax gourdmedwgoB658
MELO3C007907.2Carg00590Silver-seed gourdcarmedB0418
MELO3C007907.2CsaV3_6G047140Cucumber (Chinese Long) v3cucmedB505
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C007907.2Cucumber (Gy14) v2cgybmedB129
MELO3C007907.2Cucumber (Gy14) v2cgybmedB440
MELO3C007907.2Cucumber (Gy14) v1cgymedB024
MELO3C007907.2Cucurbita maxima (Rimu)cmamedB204
MELO3C007907.2Cucurbita maxima (Rimu)cmamedB670
MELO3C007907.2Cucurbita maxima (Rimu)cmamedB839
MELO3C007907.2Cucurbita maxima (Rimu)cmamedB907
MELO3C007907.2Cucurbita moschata (Rifu)cmomedB193
MELO3C007907.2Cucurbita moschata (Rifu)cmomedB829
MELO3C007907.2Cucurbita moschata (Rifu)cmomedB896
MELO3C007907.2Cucurbita pepo (Zucchini)cpemedB134
MELO3C007907.2Cucurbita pepo (Zucchini)cpemedB325
MELO3C007907.2Cucurbita pepo (Zucchini)cpemedB531
MELO3C007907.2Cucurbita pepo (Zucchini)cpemedB840
MELO3C007907.2Wild cucumber (PI 183967)cpimedB144
MELO3C007907.2Cucumber (Chinese Long) v2cumedB143
MELO3C007907.2Cucumber (Chinese Long) v2cumedB145
MELO3C007907.2Melon (DHL92) v3.6.1medmedB061
MELO3C007907.2Melon (DHL92) v3.6.1medmedB131
MELO3C007907.2Melon (DHL92) v3.6.1medmedB142
MELO3C007907.2Bottle gourd (USVL1VR-Ls)lsimedB080
MELO3C007907.2Bottle gourd (USVL1VR-Ls)lsimedB512
MELO3C007907.2Watermelon (Charleston Gray)medwcgB509
MELO3C007907.2Watermelon (Charleston Gray)medwcgB545
MELO3C007907.2Watermelon (97103) v1medwmB548
MELO3C007907.2Silver-seed gourdcarmedB0653
MELO3C007907.2Silver-seed gourdcarmedB0966
MELO3C007907.2Cucumber (Chinese Long) v3cucmedB145
MELO3C007907.2Cucumber (Chinese Long) v3cucmedB146
MELO3C007907.2Cucumber (Chinese Long) v3cucmedB254
MELO3C007907.2Watermelon (97103) v2medwmbB519
MELO3C007907.2Watermelon (97103) v2medwmbB544
MELO3C007907.2Watermelon (97103) v2medwmbB551
MELO3C007907.2Wax gourdmedwgoB640