MELO3C007786.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C007786.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	BnaA10g22140D protein
Location	chr08 : 5360733 .. 5361936 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCAAGAAATCCATTTTATTTGGTATTGGCACAATCAAAGAAGACCCTTCAATAAAATATACATATGTGTATGTATATTTTATAGATAGGATACTTTAATTGATATATAATACAATCAATTTCTCCACAAAGGGTCCACCCATAGAAAAAGTAAAACCAAAATGCCCAAGAAAACCAGACTAAGTCATCAAAGATCACTTTTTTATTTCTTTTATACACTACACCGACTTGTCAGCCTTATCCACAATCATACCTCAATCTGAATATAAATTATGTCGGCCTCCTAAAGGGGTCTTCTCAAAATCAACTAAGGAGCATTGAAAAATCACAGCCATGGCGGATATTGCAATTCTTGTAGCAGAGGAATACGAGAGGAGGACCAAGCATCCAAGGCGAGATCAAGAGATGGTCAGGCAAGAGCTTCAAGATTTGGGTTCTGGGGTTTCCATATCTGCAACTGCTACTTCAATTACGATGAAGAAGATGATGGAAATGGCGAAAAGAAATAATTACTCTGCTGAGATATCGGAATTCAATCGGGTTTTTGAACCCAAATCTCAAATTGGCCGAGCTGCTTCCACTGGGTTCTTCTCAGCTTGAGTTCCTCTGTCTTTGAAATTGGGTTCATATATTGTAAATGTTTCTCATCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCAAATGTGTACATGTTTTTTCTTTTTCTTTTTCTTTTTTCTTCTTTTTTTGGATTCCATTAGTTTTGAAATTAAATGCTTTTGAATTCGAGAGAAGAAAGGTGGGATTGTATTATGATTTGATGATTATTAACCATATGAATGTTGGGAAAAGAATGGGTGATTTGGTTTTCAAGAAATGATTGGGAGTTCGTCACAGGGGTGTGTTTAATTTTTAGTTGTTCTTGAAACATAAAGCTTAATCTTAATGTTTATGCTTTGGGATCAATCCACCATTTAAAATGGAATCAGTAATAATAATATTTGATATTAAATCGTAGACAAAATTTTAAATAAAGTGATTATTTATATACCCATTTTGAAGTGAGAAATAATTAATTTTTCAAACATATTGTTGGCCTCTACACAAACTCTCATAGCTTTATGTTTTTGTATCACCCCATGAGCTTTTATATTAATAATATAATTATTTGTATGATCTCTCTTTATTTGATTGATAATAGTTATGAAATTTTGGTCGCATTCTAA

mRNA sequence

ACCAAGAAATCCATTTTATTTGGTATTGGCACAATCAAAGAAGACCCTTCAATAAAATATACATATGTGTATGTATATTTTATAGATAGGATACTTTAATTGATATATAATACAATCAATTTCTCCACAAAGGGTCCACCCATAGAAAAAGTAAAACCAAAATGCCCAAGAAAACCAGACTAAGTCATCAAAGATCACTTTTTTATTTCTTTTATACACTACACCGACTTGTCAGCCTTATCCACAATCATACCTCAATCTGAATATAAATTATGTCGGCCTCCTAAAGGGGTCTTCTCAAAATCAACTAAGGAGCATTGAAAAATCACAGCCATGGCGgATATTGCAATTCTTGTAGCAGAGGAATACGAGAGGAGGACCAAGCATCCAAGGCGAGATCAAGAGATGGTCAGGCAAGAGCTTCAAGATTTGGGTTCTGGGGTTTCCATATCTGCAACTGCTACTTCAATTACGATGAAGAAGATGATGGAAATGGCGAAAAGAAATAATTACTCTGCTGAGATATCGGAATTCAATCGGGTTTTTGAACCCAAATCTCAAATTGGCCGAGCTGCTTCCACTGGGTTCTTCTCAGCTTGAGTTCCTCTGTCTTTGAAATTGGGTTCATATATTGTAAATGTTTCTCATCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCAAATGTGTACATGTTTTTTCTTTTTCTTTTTCTTTTTTCTTCTTTTTTTGGATTCCATTAGTTTTGAAATTAAATGCTTTTGAATTCGAGAGAAGAAAGGTGGGATTGTATTATGATTTGATGATTATTAACCATATGAATGTTGGGAAAAGAATGGGTGATTTGGTTTTCAAGAAATGATTGGGAGTTCGTCACAGGGGTGTGTTTAATTTTTAGTTGTTCTTGAAACATAAAGCTTAATCTTAATGTTTATGCTTTGGGATCAATCCACCATTTAAAATGGAATCAGTAATAATAATATTTGATATTAAATCGTAGACAAAATTTTAAATAAAGTGATTATTTATATACCCATTTTGAAGTGAGAAATAATTAATTTTTCAAACATATTGTTGGCCTCTACACAAACTCTCATAGCTTTATGTTTTTGTATCACCCCATGAGCTTTTATATTAATAATATAATTATTTGTATGATCTCTCTTTATTTGATTGATAATAGTTATGAAATTTTGGTCGCATTCTAA

Coding sequence (CDS)

ATGGCGGATATTGCAATTCTTGTAGCAGAGGAATACGAGAGGAGGACCAAGCATCCAAGGCGAGATCAAGAGATGGTCAGGCAAGAGCTTCAAGATTTGGGTTCTGGGGTTTCCATATCTGCAACTGCTACTTCAATTACGATGAAGAAGATGATGGAAATGGCGAAAAGAAATAATTACTCTGCTGAGATATCGGAATTCAATCGGGTTTTTGAACCCAAATCTCAAATTGGCCGAGCTGCTTCCACTGGGTTCTTCTCAGCTTGA

Protein sequence

MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNYSAEISEFNRVFEPKSQIGRAASTGFFSA

Homology

[Close]

BLAST of MELO3C007786.2 vs. NCBI nr
Match: XP_016899241.1 (PREDICTED: uncharacterized protein LOC103485003 [Cucumis melo])

HSP 1 Score: 167.9 bits (424), Expect = 1.5e-38
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60
          MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY
Sbjct: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60

Query: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 89
          SAEISEFNRVFEPKSQIGRAASTGFFSA
Sbjct: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88

[Close]

BLAST of MELO3C007786.2 vs. NCBI nr
Match: XP_011657992.1 (PREDICTED: uncharacterized protein LOC105435930 [Cucumis sativus] >KGN48782.1 hypothetical protein Csa_6G501230 [Cucumis sativus])

HSP 1 Score: 146.4 bits (368), Expect = 4.7e-32
Identity = 79/89 (88.76%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLG-SGVSISATATSITMKKMMEMAKRNN 60
          MADIAILVAEEYERRTK+PRR QEM+RQELQ+LG SGVSISATATSI MKKMMEMAK++N
Sbjct: 1  MADIAILVAEEYERRTKNPRRGQEMIRQELQELGSSGVSISATATSIRMKKMMEMAKKHN 60

Query: 61 YSAEISEFNRVFEPKSQIGRAASTGFFSA 89
          YSAE+SEFN VFEPKSQIGRAASTGFFSA
Sbjct: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 89

[Close]

BLAST of MELO3C007786.2 vs. NCBI nr
Match: XP_023003555.1 (uncharacterized protein LOC111497122 [Cucurbita maxima])

HSP 1 Score: 95.9 bits (237), Expect = 7.3e-17
Identity = 60/88 (68.18%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60
          MADIAILVAEEYERR K+PR+ +E    E+QDL SGVSISATA+ +  KKMME+      
Sbjct: 1  MADIAILVAEEYERRMKNPRQ-EEKAAAEVQDLVSGVSISATASRV--KKMMELELE--- 60

Query: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 89
           AE +EF  VFEPKSQIGRAASTGFFSA
Sbjct: 61 LAERNEFKWVFEPKSQIGRAASTGFFSA 82

[Close]

BLAST of MELO3C007786.2 vs. NCBI nr
Match: XP_022962826.1 (uncharacterized protein LOC111463202 [Cucurbita moschata])

HSP 1 Score: 95.5 bits (236), Expect = 9.5e-17
Identity = 59/88 (67.05%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60
          MADIAILVAEEYERR K+PR++Q+    E+QDL SGVSISATA+ +  KKMME+      
Sbjct: 1  MADIAILVAEEYERRMKNPRQEQK-AAAEVQDLVSGVSISATASRV--KKMMELELE--- 60

Query: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 89
           A+ +EF  VFEPKSQIGRAASTGFFSA
Sbjct: 61 LAQPNEFKWVFEPKSQIGRAASTGFFSA 82

[Close]

BLAST of MELO3C007786.2 vs. NCBI nr
Match: XP_022133051.1 (uncharacterized protein LOC111005739 [Momordica charantia])

HSP 1 Score: 87.0 bits (214), Expect = 3.4e-14
Identity = 53/88 (60.23%), Postives = 63/88 (71.59%), Query Frame = 0


Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60
          MADIAILVAEEYERR K+P   Q   +QE+    SGVSISATAT+  MK+M+++ K N  
Sbjct: 1  MADIAILVAEEYERRMKNPGL-QAKQKQEIDGFASGVSISATATTGRMKQMLQLGKPN-- 60

Query: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 89
              ++F  V EPKSQIGRAAS GFFSA
Sbjct: 61 ----ADFKWVSEPKSQIGRAASAGFFSA 81

[Close]

BLAST of MELO3C007786.2 vs. TAIR10
Match: AT5G65207.1 (unknown protein)

HSP 1 Score: 41.6 bits (96), Expect = 3.0e-04
Identity = 36/88 (40.91%), Postives = 40/88 (45.45%), Query Frame = 0


Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60
          MADIAILVAEEYERR KH        R    +      I A  T    K  +E  K+N  
Sbjct: 1  MADIAILVAEEYERRMKHTTVGS---RSSPVEFDWWKIIPAKMTIAFDKMKIESLKKN-- 60

Query: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 89
                    FE KS+   A S GFFSA
Sbjct: 61 ----------FEAKSEFALAISHGFFSA 73

[Close]

BLAST of MELO3C007786.2 vs. TrEMBL
Match: tr|A0A1S4DTC5|A0A1S4DTC5_CUCME (uncharacterized protein LOC103485003 OS=Cucumis melo OX=3656 GN=LOC103485003 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.0e-38
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60
          MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY
Sbjct: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60

Query: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 89
          SAEISEFNRVFEPKSQIGRAASTGFFSA
Sbjct: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88

[Close]

BLAST of MELO3C007786.2 vs. TrEMBL
Match: tr|A0A0A0KK75|A0A0A0KK75_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501230 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.1e-32
Identity = 79/89 (88.76%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLG-SGVSISATATSITMKKMMEMAKRNN 60
          MADIAILVAEEYERRTK+PRR QEM+RQELQ+LG SGVSISATATSI MKKMMEMAK++N
Sbjct: 1  MADIAILVAEEYERRTKNPRRGQEMIRQELQELGSSGVSISATATSIRMKKMMEMAKKHN 60

Query: 61 YSAEISEFNRVFEPKSQIGRAASTGFFSA 89
          YSAE+SEFN VFEPKSQIGRAASTGFFSA
Sbjct: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 89

[Close]

BLAST of MELO3C007786.2 vs. TrEMBL
Match: tr|A0A2P5BZI5|A0A2P5BZI5_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_303260 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.3e-06
Identity = 44/92 (47.83%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 1   MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVS-ISATATSITMK---KMMEMAK 60
           M DIAILVAEE+ERR  H    +++  +  QD+ S VS +S  A S+  K   K ME   
Sbjct: 33  MTDIAILVAEEFERRVSHSHSRKDVGIEAKQDMRSMVSWVSMVAQSVKDKIGDKNMEF-- 92

Query: 61  RNNYSAEISEFNRVFEPKSQIGRAASTGFFSA 89
                     F RVFEPK+QIG AAS GFFSA
Sbjct: 93  ----------FKRVFEPKTQIGLAASDGFFSA 112

[Close]

BLAST of MELO3C007786.2 vs. TrEMBL
Match: tr|A0A068TYM4|A0A068TYM4_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00036435001 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-05
Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 0


Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60
          MADIA+LVAEEYERR K+ R+       + +++     +S +A  + ++    M K+   
Sbjct: 1  MADIAMLVAEEYERRVKNSRKSTHQGAND-EEIEYFPHVSVSAKRVDLESSFCMMKKEIG 60

Query: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 89
            ++    RVFEPKS IG AAS  FFSA
Sbjct: 61 GEKMERVKRVFEPKSDIGVAASKCFFSA 87

[Close]

BLAST of MELO3C007786.2 vs. TrEMBL
Match: tr|A0A2C9UWH5|A0A2C9UWH5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G139700 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.2e-05
Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 0


Query: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60
          MADIAILVAEEYERR K+ R+  +    E++ +     +S  A ++  K  + +A+ N  
Sbjct: 1  MADIAILVAEEYERRVKNSRKLSKASDSEMEVVN---WVSFLAQNVKDKVRVRVAEEN-- 60

Query: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 89
            EI ++  + EPKSQ+G AAS GFFSA
Sbjct: 61 -IEIPKW--ILEPKSQVGVAASNGFFSA 80

The following BLAST results are available for this feature:

BLAST of MELO3C007786.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899241.1	1.5e-38	100.00	PREDICTED: uncharacterized protein LOC103485003 [Cucumis melo]	[more]
XP_011657992.1	4.7e-32	88.76	PREDICTED: uncharacterized protein LOC105435930 [Cucumis sativus] >KGN48782.1 hy...	[more]
XP_023003555.1	7.3e-17	68.18	uncharacterized protein LOC111497122 [Cucurbita maxima]	[more]
XP_022962826.1	9.5e-17	67.05	uncharacterized protein LOC111463202 [Cucurbita moschata]	[more]
XP_022133051.1	3.4e-14	60.23	uncharacterized protein LOC111005739 [Momordica charantia]	[more]

BLAST of MELO3C007786.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G65207.1	3.0e-04	40.91	unknown protein	[more]

BLAST of MELO3C007786.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C007786.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DTC5\|A0A1S4DTC5_CUCME	1.0e-38	100.00	uncharacterized protein LOC103485003 OS=Cucumis melo OX=3656 GN=LOC103485003 PE=...	[more]
tr\|A0A0A0KK75\|A0A0A0KK75_CUCSA	3.1e-32	88.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501230 PE=4 SV=1	[more]
tr\|A0A2P5BZI5\|A0A2P5BZI5_9ROSA	1.3e-06	47.83	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_303260 PE=4 S...	[more]
tr\|A0A068TYM4\|A0A068TYM4_COFCA	1.5e-05	40.91	Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00036435001 PE=4 ...	[more]
tr\|A0A2C9UWH5\|A0A2C9UWH5_MANES	4.2e-05	44.32	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G139700 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007786.2.1	MELO3C007786.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36067	FAMILY NOT NAMED	coord: 1..88

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C007786.2	Csa6G501230	Cucumber (Chinese Long) v2	cumedB483
MELO3C007786.2	CSPI06G30540	Wild cucumber (PI 183967)	cpimedB493
MELO3C007786.2	Cucsa.104690	Cucumber (Gy14) v1	cgymedB131
MELO3C007786.2	CmaCh03G007900	Cucurbita maxima (Rimu)	cmamedB703
MELO3C007786.2	CmaCh07G005180	Cucurbita maxima (Rimu)	cmamedB907
MELO3C007786.2	CmoCh03G008240	Cucurbita moschata (Rifu)	cmomedB694
MELO3C007786.2	CmoCh07G005130	Cucurbita moschata (Rifu)	cmomedB896
MELO3C007786.2	Lsi01G007300	Bottle gourd (USVL1VR-Ls)	lsimedB163
MELO3C007786.2	Cp4.1LG19g09570	Cucurbita pepo (Zucchini)	cpemedB531
MELO3C007786.2	Cp4.1LG10g00970	Cucurbita pepo (Zucchini)	cpemedB080
MELO3C007786.2	Cla014173	Watermelon (97103) v1	medwmB559
MELO3C007786.2	ClCG01G019080	Watermelon (Charleston Gray)	medwcgB509
MELO3C007786.2	Cla97C01G018540	Watermelon (97103) v2	medwmbB505
MELO3C007786.2	Bhi03G000947	Wax gourd	medwgoB642
MELO3C007786.2	Carg00675	Silver-seed gourd	carmedB0418
MELO3C007786.2	Carg16021	Silver-seed gourd	carmedB0766
MELO3C007786.2	CsaV3_6G045760	Cucumber (Chinese Long) v3	cucmedB505

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C007786.2	Cucumber (Gy14) v2	cgybmedB440