Bhi03G000947 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi03G000947
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr3 : 25249604 .. 25249855 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATATTGCAATTCTTGTAGCAGAGGAATACGAGAGAAGGATGAAGAATCCAACGCAAGTTCAGGAGAAGCAAGAGCTTCAAGATTTGGCTTCTGGGGTTTCTATCTCTGCAACTGCTACTTCGATTAGGATGAAGAAGATGATGGAAATGGCAAAACAGAATTCACAGATTTCGGAATTCAAATGGGTTTTTGAACCCAAATCTCAAATTGGGCGAGCTGCTTCCACCGGATTCTTCTCGGCTTGA

mRNA sequence

ATGGCGGATATTGCAATTCTTGTAGCAGAGGAATACGAGAGAAGGATGAAGAATCCAACGCAAGTTCAGGAGAAGCAAGAGCTTCAAGATTTGGCTTCTGGGGTTTCTATCTCTGCAACTGCTACTTCGATTAGGATGAAGAAGATGATGGAAATGGCAAAACAGAATTCACAGATTTCGGAATTCAAATGGGTTTTTGAACCCAAATCTCAAATTGGGCGAGCTGCTTCCACCGGATTCTTCTCGGCTTGA

Coding sequence (CDS)

ATGGCGGATATTGCAATTCTTGTAGCAGAGGAATACGAGAGAAGGATGAAGAATCCAACGCAAGTTCAGGAGAAGCAAGAGCTTCAAGATTTGGCTTCTGGGGTTTCTATCTCTGCAACTGCTACTTCGATTAGGATGAAGAAGATGATGGAAATGGCAAAACAGAATTCACAGATTTCGGAATTCAAATGGGTTTTTGAACCCAAATCTCAAATTGGGCGAGCTGCTTCCACCGGATTCTTCTCGGCTTGA

Protein sequence

MADIAILVAEEYERRMKNPTQVQEKQELQDLASGVSISATATSIRMKKMMEMAKQNSQISEFKWVFEPKSQIGRAASTGFFSA

Homology

[Close]

BLAST of Bhi03G000947 vs. TAIR10
Match: AT5G65207.1 (unknown protein)

HSP 1 Score: 44.3 bits (103), Expect = 4.3e-05
Identity = 37/83 (44.58%), Postives = 43/83 (51.81%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPTQVQEKQELQDLASGVSISATATSIRMKKMMEMAKQNSQIS 60
          MADIAILVAEEYERRMK+ T V  +    +      I A  T    K  +E  K+N    
Sbjct: 1  MADIAILVAEEYERRMKH-TTVGSRSSPVEFDWWKIIPAKMTIAFDKMKIESLKKN---- 60

Query: 61 EFKWVFEPKSQIGRAASTGFFSA 84
               FE KS+   A S GFFSA
Sbjct: 61 -----FEAKSEFALAISHGFFSA 73

[Close]

BLAST of Bhi03G000947 vs. TrEMBL
Match: tr|A0A0A0KK75|A0A0A0KK75_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501230 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.9e-24
Identity = 70/89 (78.65%), Postives = 79/89 (88.76%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPTQVQE--KQELQDL-ASGVSISATATSIRMKKMMEMAKQ-- 60
          MADIAILVAEEYERR KNP + QE  +QELQ+L +SGVSISATATSIRMKKMMEMAK+  
Sbjct: 1  MADIAILVAEEYERRTKNPRRGQEMIRQELQELGSSGVSISATATSIRMKKMMEMAKKHN 60

Query: 61 -NSQISEFKWVFEPKSQIGRAASTGFFSA 84
           ++++SEF WVFEPKSQIGRAASTGFFSA
Sbjct: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 89

[Close]

BLAST of Bhi03G000947 vs. TrEMBL
Match: tr|A0A1S4DTC5|A0A1S4DTC5_CUCME (uncharacterized protein LOC103485003 OS=Cucumis melo OX=3656 GN=LOC103485003 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.0e-24
Identity = 70/88 (79.55%), Postives = 76/88 (86.36%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPTQVQE--KQELQDLASGVSISATATSIRMKKMMEMAKQN-- 60
          MADIAILVAEEYERR K+P + QE  +QELQDL SGVSISATATSI MKKMMEMAK+N  
Sbjct: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60

Query: 61 -SQISEFKWVFEPKSQIGRAASTGFFSA 84
           ++ISEF  VFEPKSQIGRAASTGFFSA
Sbjct: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88

[Close]

BLAST of Bhi03G000947 vs. TrEMBL
Match: tr|A0A2C9UWH5|A0A2C9UWH5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G139700 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.0e-08
Identity = 39/83 (46.99%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPTQVQEKQELQDLASGVSISATATSIRMKKMMEMAKQNSQIS 60
          MADIAILVAEEYERR+KN  ++ +  +  ++     +S  A +++ K  + +A++N +I 
Sbjct: 1  MADIAILVAEEYERRVKNSRKLSKASD-SEMEVVNWVSFLAQNVKDKVRVRVAEENIEIP 60

Query: 61 EFKWVFEPKSQIGRAASTGFFSA 84
            KW+ EPKSQ+G AAS GFFSA
Sbjct: 61 --KWILEPKSQVGVAASNGFFSA 80

[Close]

BLAST of Bhi03G000947 vs. TrEMBL
Match: tr|A0A2P4L037|A0A2P4L037_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_59495 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 9.5e-07
Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPTQV-QEKQELQDLASGVSISATATSIRMKKMMEMAKQNSQI 60
          MADIAILVAEEYERR+K+  +    K E +     + I + A+S+ ++   ++  Q  ++
Sbjct: 1  MADIAILVAEEYERRVKDARKAGGAKGEYE-----IDIVSYASSLALRVKTKIGNQKMEL 60

Query: 61 SEFKWVFEPKSQIGRAASTGFFSA 84
            FKWV EPK+QIG AAS GFFSA
Sbjct: 61 --FKWVLEPKTQIGLAASCGFFSA 77

[Close]

BLAST of Bhi03G000947 vs. TrEMBL
Match: tr|B9T6Q9|B9T6Q9_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0145330 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.6e-06
Identity = 39/83 (46.99%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPTQVQEKQELQDLASGVSISATATSIRMKKMMEMAKQNSQIS 60
          MADIA+LVAEEYERR+KN  +        ++     +S    S++ K M E    N ++ 
Sbjct: 1  MADIAMLVAEEYERRVKNSRKASADNGEVEINWVSCVSLATQSLKNKFMQE----NIELI 60

Query: 61 EFKWVFEPKSQIGRAASTGFFSA 84
            KWV EPK+QIG AAS GFFSA
Sbjct: 61 A-KWVLEPKTQIGLAASNGFFSA 78

[Close]

BLAST of Bhi03G000947 vs. NCBI nr
Match: XP_011657992.1 (PREDICTED: uncharacterized protein LOC105435930 [Cucumis sativus] >KGN48782.1 hypothetical protein Csa_6G501230 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 4.4e-24
Identity = 70/89 (78.65%), Postives = 79/89 (88.76%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPTQVQE--KQELQDL-ASGVSISATATSIRMKKMMEMAKQ-- 60
          MADIAILVAEEYERR KNP + QE  +QELQ+L +SGVSISATATSIRMKKMMEMAK+  
Sbjct: 1  MADIAILVAEEYERRTKNPRRGQEMIRQELQELGSSGVSISATATSIRMKKMMEMAKKHN 60

Query: 61 -NSQISEFKWVFEPKSQIGRAASTGFFSA 84
           ++++SEF WVFEPKSQIGRAASTGFFSA
Sbjct: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 89

[Close]

BLAST of Bhi03G000947 vs. NCBI nr
Match: XP_016899241.1 (PREDICTED: uncharacterized protein LOC103485003 [Cucumis melo])

HSP 1 Score: 119.0 bits (297), Expect = 7.6e-24
Identity = 70/88 (79.55%), Postives = 76/88 (86.36%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPTQVQE--KQELQDLASGVSISATATSIRMKKMMEMAKQN-- 60
          MADIAILVAEEYERR K+P + QE  +QELQDL SGVSISATATSI MKKMMEMAK+N  
Sbjct: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60

Query: 61 -SQISEFKWVFEPKSQIGRAASTGFFSA 84
           ++ISEF  VFEPKSQIGRAASTGFFSA
Sbjct: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88

[Close]

BLAST of Bhi03G000947 vs. NCBI nr
Match: XP_022962826.1 (uncharacterized protein LOC111463202 [Cucurbita moschata])

HSP 1 Score: 112.1 bits (279), Expect = 9.3e-22
Identity = 64/84 (76.19%), Postives = 72/84 (85.71%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPTQVQE-KQELQDLASGVSISATATSIRMKKMMEMAKQNSQI 60
          MADIAILVAEEYERRMKNP Q Q+   E+QDL SGVSISATA+  R+KKMME+  + +Q 
Sbjct: 1  MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATAS--RVKKMMELELELAQP 60

Query: 61 SEFKWVFEPKSQIGRAASTGFFSA 84
          +EFKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 NEFKWVFEPKSQIGRAASTGFFSA 82

[Close]

BLAST of Bhi03G000947 vs. NCBI nr
Match: XP_023003555.1 (uncharacterized protein LOC111497122 [Cucurbita maxima])

HSP 1 Score: 109.8 bits (273), Expect = 4.6e-21
Identity = 62/84 (73.81%), Postives = 72/84 (85.71%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPTQVQE-KQELQDLASGVSISATATSIRMKKMMEMAKQNSQI 60
          MADIAILVAEEYERRMKNP Q ++   E+QDL SGVSISATA+  R+KKMME+  + ++ 
Sbjct: 1  MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSISATAS--RVKKMMELELELAER 60

Query: 61 SEFKWVFEPKSQIGRAASTGFFSA 84
          +EFKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 NEFKWVFEPKSQIGRAASTGFFSA 82

[Close]

BLAST of Bhi03G000947 vs. NCBI nr
Match: XP_022133051.1 (uncharacterized protein LOC111005739 [Momordica charantia])

HSP 1 Score: 107.8 bits (268), Expect = 1.7e-20
Identity = 60/84 (71.43%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNP-TQVQEKQELQDLASGVSISATATSIRMKKMMEMAKQNSQI 60
          MADIAILVAEEYERRMKNP  Q ++KQE+   ASGVSISATAT+ RMK+M+++ K N   
Sbjct: 1  MADIAILVAEEYERRMKNPGLQAKQKQEIDGFASGVSISATATTGRMKQMLQLGKPN--- 60

Query: 61 SEFKWVFEPKSQIGRAASTGFFSA 84
          ++FKWV EPKSQIGRAAS GFFSA
Sbjct: 61 ADFKWVSEPKSQIGRAASAGFFSA 81

The following BLAST results are available for this feature:

BLAST of Bhi03G000947 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi03G000947 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G65207.1	4.3e-05	44.58	unknown protein	[more]

BLAST of Bhi03G000947 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KK75\|A0A0A0KK75_CUCSA	2.9e-24	78.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501230 PE=4 SV=1	[more]
tr\|A0A1S4DTC5\|A0A1S4DTC5_CUCME	5.0e-24	79.55	uncharacterized protein LOC103485003 OS=Cucumis melo OX=3656 GN=LOC103485003 PE=...	[more]
tr\|A0A2C9UWH5\|A0A2C9UWH5_MANES	5.0e-08	46.99	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G139700 PE=4 SV=...	[more]
tr\|A0A2P4L037\|A0A2P4L037_QUESU	9.5e-07	47.62	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_59495 PE=4 SV=1	[more]
tr\|B9T6Q9\|B9T6Q9_RICCO	3.6e-06	46.99	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0145330 PE=4 SV=1	[more]

BLAST of Bhi03G000947 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657992.1	4.4e-24	78.65	PREDICTED: uncharacterized protein LOC105435930 [Cucumis sativus] >KGN48782.1 hy...	[more]
XP_016899241.1	7.6e-24	79.55	PREDICTED: uncharacterized protein LOC103485003 [Cucumis melo]	[more]
XP_022962826.1	9.3e-22	76.19	uncharacterized protein LOC111463202 [Cucurbita moschata]	[more]
XP_023003555.1	4.6e-21	73.81	uncharacterized protein LOC111497122 [Cucurbita maxima]	[more]
XP_022133051.1	1.7e-20	71.43	uncharacterized protein LOC111005739 [Momordica charantia]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M000947	Bhi03M000947	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36067	FAMILY NOT NAMED	coord: 1..83

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi03G000947	Csa6G501230	Cucumber (Chinese Long) v2	cuwgoB620
Bhi03G000947	MELO3C007786	Melon (DHL92) v3.5.1	mewgoB637
Bhi03G000947	ClCG01G019080	Watermelon (Charleston Gray)	wcgwgoB223
Bhi03G000947	CSPI06G30540	Wild cucumber (PI 183967)	cpiwgoB627
Bhi03G000947	Cucsa.104690	Cucumber (Gy14) v1	cgywgoB152
Bhi03G000947	CmaCh03G007900	Cucurbita maxima (Rimu)	cmawgoB0798
Bhi03G000947	CmaCh07G005180	Cucurbita maxima (Rimu)	cmawgoB1072
Bhi03G000947	CmoCh07G005130	Cucurbita moschata (Rifu)	cmowgoB1065
Bhi03G000947	CmoCh03G008240	Cucurbita moschata (Rifu)	cmowgoB0792
Bhi03G000947	Lsi01G007300	Bottle gourd (USVL1VR-Ls)	lsiwgoB181
Bhi03G000947	Cp4.1LG10g00970	Cucurbita pepo (Zucchini)	cpewgoB0084
Bhi03G000947	Cp4.1LG19g09570	Cucurbita pepo (Zucchini)	cpewgoB0596
Bhi03G000947	MELO3C007786.2	Melon (DHL92) v3.6.1	medwgoB642
Bhi03G000947	Carg00675	Silver-seed gourd	carwgoB0491
Bhi03G000947	Carg16021	Silver-seed gourd	carwgoB0890
Bhi03G000947	CsaV3_6G045760	Cucumber (Chinese Long) v3	cucwgoB641
Bhi03G000947	Cla014173	Watermelon (97103) v1	wgowmB426
Bhi03G000947	Cla97C01G018540	Watermelon (97103) v2	wgowmbB398

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi03G000947	Cucumber (Gy14) v2	cgybwgoB592