MELO3C006747.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C006747.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionsignal recognition particle 19 kDa protein
Locationchr06 : 5654144 .. 5662562 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGAAAATAGAAAGAAAAATCCTTTTCCGCCTCACCCCATTTTCCTCGCTCAATTTCTCCCATTGTCGTAGTTCGGTCGGAACAGTAAAATCAGATCTCTGTTTAGCTTCTCGATTCGCCATTCTTAATCAATTGATTCTTGATTTGGTAGGTACGTAACTTGTTTCTTACGATCTGGTGTTTTCAGATTGTTATTCTTTTGCTCTATAGAATTTCGTAGGCAGTACAGTAATTGGCATGCCATATGAGGAATTGATTCCGTTTTTTGTCATTTTGATGGCAATGATCAGAAAACTGAGTTCTTCTTAGTGAGGAATTTGTTAAGTAGTTGACATCCTGTTCAATTAGGCGATTTTTAATTGCTTGAATATAATATGTTTCTTTTTGTTTTATATTTGATTAAACGTGCATTGTGATAGGAATTTGGTCGGAATATGGATGGAGAAATTCCCAACATAAAGAGATGGGTAGTGTTGTATCCCATTTATATAAATTCAAAGAAAACAATTGCTGAAGGAAGACGTATAGGTGTTAGCAAAGCTTGTGAGAATCCTACGTGTGCTGAGATTGGGGATTGCTGCAGTCATCTCAAACTGCCCTTTGCTATTGAGGTTTTTCTAGCAATTATCTGTCATTGATAAAGATCTTACTTTCTCGTTAATTTTTGTTCTTCCTGCTGCCTGTCTGTGTTGAAGGTAGCTGCTGCAGCCTGCATTGAGTTTATGTGAACGTGTGATAATTGATAGAACGTGTTAATTGGGTTGTTTTCTTATATCATTAAGAAAATCAACATTCAAACTAAATCCAAAAATCATTTAGATGTTTGGTTCCTTCGGGGACATGATAATTTAAACCATGTTGGGTAGCCATTTTGTGTTTTAAACGTATGCTTGTTTTCTTCGAATTTTCTTATCATGATTTTCACATTTGAATTCTTAGTCAAATCTAAAAACAAAAACTAAGTTAGAGAAAAATACCTTTTTTTAGTGTTCGAAACTCGGCTTGATTTTTGAAAACATCGGTGGAAAGTGGACAACATAACATGCAAATTCAGAGCTGGAAGTAGAGTTGATAATCTTAGTTTTCAAAGTGTAAAAAAACCAAATGATCATCTGATGGGGCATTATGAATTCACAACCAATAGCTATAAAGTTAACAGTTCTGATTTGTCTTGCATTTTTGCTTTTGTAGCTGAAAATCCACATCTTTTTTCCTTTCAATAGAAAAACAAAGCGAAGTTTTTTGGTTTATATTTACAGCATTCCTGCAGATTGATAAAGCATATCCTCGTGATTTCATGCAAAGAGGGAGAGTGCGGGTTCAGCTGAAGAAGGAGGATGGAACCCTGTCCAATCCAGCTATTACTTCGAGTAAGGCTTTTGCCAGTCTCTTGAAAAAGATTTCTTTCGGATCTTTCTCGTTCCAAAGGAGATATTTAATTTAAAATCTTTTTTGGATTTCAAACCATAGAATTTAAAATTATTTCTTGAACTTTTTTGGTTCAAACCGAGAGTAAAATTTCAAGCAGTTGTCATGTGAGAATGGTCAGTGTGTGCAAGCTAACCTAGACACTCAGTTTTCTAGAAAAGATAGTGTATTACCCAATGGTATTTTGGTCAATTCATCAAGATTGTTGCATAACTTTATGGTTTTTACCTGAAGTGGATTTATAAAGATGAAATTAGGCCATAAAGAAACATTGGAGGCTAGCCAAAAAGGAGAGGTGCTCCCTGAGGGTGAATTCTTCTTCCCATGGATAGACAATAGCGAAAGAATTGTCTATTCTTCGTCAACAAATTACTAACAAACTATTAAATCAAACACATCATACTTATTAACTAAAGAAAATTATTGCTTCTAAATTATTTTTTCAGCAATCATCCCATTTACTAAAAGGGAATTTTTCCTCCAGTTTGATTGAAACACCCTGAAAATTCTGTTTGAGGTTTGTTTCAAATCCAAAGTGGTAACAGCATAGGTCTAATTGGAATGAAACAAAATCCCAGTTTCCACCCTTTTTTTCTGCCTTGGGCCTTAGTGTTAAACTTCCTTCCCACCTACAACAATATCAGCCAAACAGCACACACAACCACAGTAATATTCCAGCAGAATTCACAGAGAAATAATATATATTATAATGAAAGGAGAGAATAGCTGTAGTTATATTTATATATTGAATAACAGTTCACCAGCCACAAAAGAGTATCAAAACCAAAGGAACTCAGCCAAATAAGAGGGCTGCACTCTCCACCATGAACAAGGTTCACACAAAATGCCTAATGACAAAGATGATCAACCCTAACACAAAAAGCTCCTATATATATTCCTATATATATACTATAGCTCCTGCTGCCATGTGTCATGAGGACCACTGGCCATCCTAACTACCAAGCTGTCTAGGTGGAATTCCCTTTTTTACCCCTTCTCTTGTAAACTTGAGTGATTGGAGGCCTAGCAATACCCCCATGGAGAAGAGCCACCTTGTCCTCAAGGTGGAAATTTGGAAATTGATGTCGAAGCAGTGCGTAGGACTCCCATGTTGCTTCATGGCTTGGTTGATCCTTTCATTGTACCAAATATTCCCAATCACGTTCAGCCTCGTTCTAGCGAAGTTGGGTCACGTTTTCCGGTTCCAACACTAACTCCATTTGATCATTTATCATTGCGATGTTCGGATAAACTTGATGTTTGTCTCCTACTGCTTTCTTAAGTTGCGATACATGGAAGATAGGGTGTATTTTGGCAGTTTCCGGAAGGCCCAACAGGTAGGTGACCTCTCCCACTCTACCCAACACCGTATATGGTCCAAAATACCTTGGCGATAATTTTTCACAACGTTTTTTCACTACTGATTGCTGTCTATAAGGCTGCAATTTTAAGTATACTCTGTCCCCAATGTCAAACACCACATCTCGGCGATGGACATTGGCAAATTTCTTCATTTGTTCTTGGGCGTGCTGCAAATGTCTCTTCAACGCTGTCAGCATCTCATCTCGAGATTGCAATTGATGCTCCACCGAATCATTTGGCGTTGTCCTGGTTTGACCATACGAAATGATAGGAGGAGGAGGCTGTCCATAAACTACTGCATAGGGGGTACTTTTGATAGACGATTGGTAGTTGGTATTGTACCAATACTCAGCCCATGCCACCTTATCACTACACGTCTTTTGCTTCTCTTGGCAAAAACATCTTAAATAAAGTTTCGAGTTGTTAACGACCTCCGTTTGTCCATCGGTTTGGGGATGGTATGTTGTGCTCCGCTTTAGTTGAGTCCCTTGTAAACGGAATAACTCTTGCCAAAAGTGGCTTAAGAAGACTCGGCCGCGGTCGGATACTATCGAGCGGGGATATCCATGGAGGTGCACTACCTCTTTGATGAACACCATAGCCACTATTTTAGCCGAAAACGGGTGACCCAAGGTAATAAAGTGAGCATATTTGCTTAGGCGATCAACTACCACCAATATCGTGTCGAACCCCTTGGAACGTGGTAGGCCCTCCACAAAATCCATGGAAATATCTTCCCGAATATGGTTGGGAATAGGGAGAGGTTGTAACAGCCCGGCCGGAGATAACGCTTGGACCTTGTTCTGCTGGCAAACATGACATTGATCCACATATTGCTTGATGTCCTTCTTCATCCCTTCCCAAAACAATTCAGCTGCTATCCTTTTGAAAGTGCGTAGCTGTCCGGAATGTCCCTCAAGGACCGAGTCATGGAAAGTGTGTAATATAGTAGGGATGAAGCTCGAAGTCCTCGAAAGAACTAATCTGCCCTTATAAAACAGCTTACCTTGGCGAACCGTATATCGGGGAACGCAGACCGGATCCGCCACAATTTTGTCAAATATGGCCTTTAACTTTTCATTCTCTTGCACCTCTTTTTCGATCACTGTAATGTCCAACAAGGAGGGGACAGTAATGGCATTTAACTCAGCCTCAATTGGGATACGGGACAAGGCGTCCGCAACTTTGTTTTCGGGTCCAGCTTTATAGCGTATTTCAAAATCAAATCCGACCAGCTTTATCAACCACTTTTGCACACCGGGTATTATTTTTCTTTGCTCCAGGATTTGTCTCAACGCTTTCTGATCAGTATATACCACAAATCGATGCCCTAAAAGGTAATGCCGCCATTTTTCCACCGGCAATACTATGGCCATCAGCTCCCTTTCGTAAACAGATTTTTCTCGAGCTGTTTCTGATAGTTTTTGGCTGAAATACACGATTGGCCTTTTGCTCTGCGATAACATAGCTCCCAACCCGATCCCTGATGCATCGGTTTCTACTTCAAAGGGTAGCGGAAGTCGGGTAATGCTAACACGGGAAATGTTACCATGGCTCTCTTAAGTTGTTCAAACGCTTTCGTTGCCTCTTCCGACCAATGCAAATTATTCTTCTTGGTTAGCTTCGTAAGTGGTGTAGCAATGACGCCATACTTTGCTACAAACCGACGGTAATACCCGGTCAGCCCCAAAAACCCCTGAAGCTCCCGTATATTCTTCGATATCAGCCACTCTAGCATGGCCTTAATCTTCTCCTAATCAGCTTCAACTCCCTTGGCCGACACCCAATGGCCTAAGTATTCAATTCGATCCTTCGCAAAATGACATTTCTTCCGGTTAGCAAAAAGGTAATGTTGTCTCAACAGCTGGAACACCACAGTGAGATGCTCTAGGTGTGTTTCCACGTCCCTGCTGTACATCAGAATGTCGTCAAAAAATACCAGCAAGAATTTACGTAAATAAGGTCGAAAAACCTGATTCATCAGTGCTTGGAATGTCGCGGGTGCATTGGTGAGGCCGAAATGCATGACTAGGAACTCGTAATGGCCCTCGTGTGTTCTGAAAGCTGTCTTGCTTACATCTTCATCCCGCACCCGGATTTGATGGTACCCGAATTTCAAGTCTATTTTAGAGAAGATACTCGCTCCACTTAGCTCATCCAGCAGCTCATCGATCATGGGAATAGGGAACTTATTCGGTACAGTAGCTCGGTTTAAAGCACGATAATCGATGCAAAACTGCCATCCCCCATCCTTCTTTTTTACCAAGATAACCAGACTGGAAAAGAGGCTGGTGCTAGGTCTTATAATTCCCAAAGCCAGCATGTCATTCACCAATCTTTCGATCTCGTTTTTCTGGGCATGTGGGTAACGGTATGGCCTCACATTAATGGGATCCGTACCTTCTTTCAACTGGATCCTATGGTCAATTTGTCGCATCGGGGGCAAACCGTCGGGCATTTCAAATATATCACTGAATTCCTGCGGTAGTTGTTCAAATTCTGGTTGGTAGTCTTCCACGGAATCTGTCACTACTAACTCCAGATCCATCTTGAAAATGCCCATGGCTTTAAAATTAACTAAAAATCTTTGATCATCCGATTGCCACGTTTTAACTAATACTTTCAAGGATATTTCCATTCTGGTCAGCGAAGGATCCCCTTTTAGGATTACCTTAGTATCTTCGACAACAAAATTCATGGTAAGGGCTTTCCAATCCACTGTCATTGCTCCTTGTTTTTGCAGCCACTGCATCCCAAGCACCATATCTAGGTTACCCAACTCCAGTGGCAAAAAATCCTCTACTATGGTTATCACTGGCAAACCCACGGTGATACCTTTACACATTTCTCGCCCTTGCACCGCCTTCTCGGACCCCATAATGACCCCATAATTCGTTATTGCCGCCATGGGTAAATTGAGGCTCTCTACTAGCTTCAGGGAGATAAAATTATGGGTAGCCCCACAATCCACCATGATCACTATTTCTCGGTCCTCCACCCTTCCTTTTATCTTGAACGTACCCGGTGCTGTCAAACCCACAACGAAGTTCAGCGATAACTCTACCATCGGACTGACTTCAACCATCTCTCCCTCGTGCGTACTGTCTACCATTTCAACATCTTCTAATTCGTCTGCAACCACACAGAGGCGAAGCTTTTTGTTTTTGCAGCGATGACCTTTGCTAAATGGTTCGTCGCATCGATAACACAACCCCTTTTCACGTCGTGCTTGCAGTTCAGAATCCGTCCACCCATCCCTGTTGCGCCGTTTTGTGGGTTGCTCGCCTGGTTTAGACTCGTAGGGATCCTTTCGGCCAACGTCACGATTTTAGTCGAAGGGATTTCCGAATTTTTTGGCGCGTGTTTTTGGGCCGGTTTCCCATCCTTAGCATATGGGCTGTGCGAGGCCCTAGCTATTTCCAACTTCTCTTCAGCTAATCGGGCCACATCCACCATGTCCTCCAAGCCCACGACCCGCATTGCAAATACTTCAGTTCTAATAACCGGGTCCAACCCTTTCGTGAAGGTCCCTACCAGAACGTCTTCTGCCATTTCCGGTAACGGCGTTGATAGCTCTTCAAATCGCTGCAAATATTCTCCCACCGAGCCCTCATGTTTTATTGCCAAGAATCGCGCGCAACCCGTTCCATATTCCCTATTACAAAAACGATTGTACATTCTCTCTTTTAATTCTTTCCACGATCGGAAACGTTTCCTATTCTCTGCCCAACGGAACCAGCACAGTCCCTTTCCTTCCATACTGACTATTGCTATCTTTAACTTCTCTTGCTCATTTAGAAGGTGCATCTGAAAGTAGTATTCCGCTTTATAAATCCATCCATCCGGGTCTTCTCCATTAAAAACCGGCATCTCCAGCTTTTTAAATTTTATCCGATCTTGCCCTGCCCCTGGTTCTAAACTCAAAGAGGTTTCCCCCTCCTCGTCTCCATCGACCAAGTCTTCCGTTCGAATTTTCCGTTTTCCCGTACTCACTCTGGTCAGTTCAAAACCACCCGGCTGTCTCTGGCAATCTTCATACATTTCGGTTAACATAGCGTGCATTTTCTCCATCGTCTTCTCTAGGACAGGTATTCGTTGAACCTCCTTTTTGATTGCTTCAATCTCAGCTTCCGAAGCATCCAAGCACTCTTTGATTAGTTTTTGCATCATTTTCTTCCACCTCCCAGGTGTCGAATGGCTCTGATACCAATGTTAAACTTCCTTCCCACCTACAACGATATCAGCCAAACAGCACACACAACCACAGTAATATTCCAGCAGAATTCACAGAGAAATATATATATGAAAGGAGAGAATAGCTGTAGTTATATTTATATATTGAATAACAGTTCACCAGCCACAAAAGAGTATCAAAACCAAAGGAACTCAGCCAAACAAGAGGGCTGCACTCTCCACCATGAACAAGGTTCATACAAAATGCCTAATGACAAAGATGATCAACCCTAACACAAAAAGCTCCTATATATATTCCTACGCTCCTGCTGCCATGTGTCATGAGGACCACTGGCCATCCTAACTACCAAGCTGTCTAGGTGGAATTCCCCTTTTTACCCCTTCTCTTGTAAACTTGAGTGATTCGAGGCCTAGCACTTAGATTTTGTGGAACTACCTTTCACAGATCATATCAATTAGTTATAGCGATTATTTGTGGGTGGGGGATTCTGCTAAATCTATATTTTGAACTCTACTGCTAGATTAACCAAGCAGCTAGTCCCTACTATTGTATCAGTTAAAGTAGTTTGGATAACTGTATTTATCTAACAGATGCTACAATTTGTCAAACTTTTTTCTAAAAGAAAGGGTTTTTCTTTTTGTTAAATTATAAGTTTAACCAGTGAACTTTTATATTTGTACCTACTTGGTCCTTCAACTCTATAAATTGTTTCGATATGTTAAAATCTTATTCTTATTAAACACCTAATTGAAGATATATAAACTTATTAAACACAAAATTGCAACTTCAAGGATATCCTTATAATTTAACCTAAATGTTTCAAAGTTATTCCCCTCCAAGTTCTTATTATCAATAAAATACCATAATTATTACGATTTTACATATGAGATATCTGGGTTTGCAGGAAAACAACTGATGCTTCGTGTAGCCGAACTTGTTCCTAGACATCCTGGGAGGACTAAGAAGCAGGAGCCGGCATCCTCATCAACAGCAGGACCTTCAAAAGGCAAGGGTGGAAGAAAGAAGAAATAGTTGCATTGCCATTATGAAATTTTTAGAATCAGATTGTTATCAACCAGGCAGGCGGTTTCGTTTTCAGGTCTTAGTTCTTAATTATTAACAACCTTTGAGTATTGGTGTTCTACCCCGGCCCTCATCCAAAACGAAAAACTAACACAGTGGTCTGAAAGTTTTTGTGAAATGTCATCGATACTTTTTCTTTAATGGTCGATTAAAAAAAAAAAAAAAAGTCAGGAAAAAGGTATTTGTGACAATTTTTTAAGTGTTACCAAATATCACATTTGGTGTAACATGGGTTTGTTTTGAACAATTTTGTAAAATAGTGGATCAAGAAGTTTTACTAAGATAAAGTTTCATGTTGGACAAAAGGATAGTGGATGGGAATTAAGTTGAATGGTCCACTTTTTTTAGAA

mRNA sequence

AGAGAAAATAGAAAGAAAAATCCTTTTCCGCCTCACCCCATTTTCCTCGCTCAATTTCTCCCATTGTCGTAGTTCGGTCGGAACAGTAAAATCAGATCTCTGTTTAGCTTCTCGATTCGCCATTCTTAATCAATTGATTCTTGATTTGGAATTTGGTCGGAATATGGATGGAGAAATTCCCAACATAAAGAGATGGGTAGTGTTGTATCCCATTTATATAAATTCAAAGAAAACAATTGCTGAAGGAAGACGTATAGGTGTTAGCAAAGCTTGTGAGAATCCTACGTGTGCTGAGATTGGGGATTGCTGCAGTCATCTCAAACTGCCCTTTGCTATTGAGATTGATAAAGCATATCCTCGTGATTTCATGCAAAGAGGGAGAGTGCGGGTTCAGCTGAAGAAGGAGGATGGAACCCTGTCCAATCCAGCTATTACTTCGAGAAAACAACTGATGCTTCGTGTAGCCGAACTTGTTCCTAGACATCCTGGGAGGACTAAGAAGCAGGAGCCGGCATCCTCATCAACAGCAGGACCTTCAAAAGGCAAGGGTGGAAGAAAGAAGAAATAGTTGCATTGCCATTATGAAATTTTTAGAATCAGATTGTTATCAACCAGGCAGGCGGTTTCGTTTTCAGGTCTTAGTTCTTAATTATTAACAACCTTTGAGTATTGGTGTTCTACCCCGGCCCTCATCCAAAACGAAAAACTAACACAGTGGTCTGAAAGTTTTTGTGAAATGTCATCGATACTTTTTCTTTAATGGTCGATTAAAAAAAAAAAAAAAAGTCAGGAAAAAGGTATTTGTGACAATTTTTTAAGTGTTACCAAATATCACATTTGGTGTAACATGGGTTTGTTTTGAACAATTTTGTAAAATAGTGGATCAAGAAGTTTTACTAAGATAAAGTTTCATGTTGGACAAAAGGATAGTGGATGGGAATTAAGTTGAATGGTCCACTTTTTTTAGAA

Coding sequence (CDS)

GAGAAAATAGAAAGAAAAATCCTTTTCCGCCTCACCCCATTTTCCTCGCTCAATTTCTCCCATTGTCGTAGTTCGGTCGGAACAGTAAAATCAGATCTCTGTTTAGCTTCTCGATTCGCCATTCTTAATCAATTGATTCTTGATTTGGAATTTGGTCGGAATATGGATGGAGAAATTCCCAACATAAAGAGATGGGTAGTGTTGTATCCCATTTATATAAATTCAAAGAAAACAATTGCTGAAGGAAGACGTATAGGTGTTAGCAAAGCTTGTGAGAATCCTACGTGTGCTGAGATTGGGGATTGCTGCAGTCATCTCAAACTGCCCTTTGCTATTGAGATTGATAAAGCATATCCTCGTGATTTCATGCAAAGAGGGAGAGTGCGGGTTCAGCTGAAGAAGGAGGATGGAACCCTGTCCAATCCAGCTATTACTTCGAGAAAACAACTGATGCTTCGTGTAGCCGAACTTGTTCCTAGACATCCTGGGAGGACTAAGAAGCAGGAGCCGGCATCCTCATCAACAGCAGGACCTTCAAAAGGCAAGGGTGGAAGAAAGAAGAAATAG

Protein sequence

EKIERKILFRLTPFSSLNFSHCRSSVGTVKSDLCLASRFAILNQLILDLEFGRNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
Homology
[Close]
BLAST of MELO3C006747.2 vs. NCBI nr
Match: KGN57200.1 (hypothetical protein Csa_3G171080 [Cucumis sativus])

HSP 1 Score: 279.6 bits (714), Expect = 7.6e-72
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 50  EFGRNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLP 109
           EFGRNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLP
Sbjct: 63  EFGRNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLP 122

Query: 110 FAIEIDKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQE 169
           FAIEIDKAYPRDFMQRGRVRVQLKKEDG LSNPAITSRKQLMLR+AELVPRHPGRTKKQE
Sbjct: 123 FAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVPRHPGRTKKQE 182

Query: 170 PASSSTAGPSKGKGGRKKK 189
           PASSSTAGPSKGKGGRKKK
Sbjct: 183 PASSSTAGPSKGKGGRKKK 201

[Close]
BLAST of MELO3C006747.2 vs. NCBI nr
Match: XP_008438988.1 (PREDICTED: signal recognition particle 19 kDa protein [Cucumis melo] >XP_008438989.1 PREDICTED: signal recognition particle 19 kDa protein [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 3.5e-69
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0 

Query: 55  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 114
           MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI
Sbjct: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60

Query: 115 DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS 174
           DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS
Sbjct: 61  DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS 120

Query: 175 TAGPSKGKGGRKKK 189
           TAGPSKGKGGRKKK
Sbjct: 121 TAGPSKGKGGRKKK 134

[Close]
BLAST of MELO3C006747.2 vs. NCBI nr
Match: XP_004147628.1 (PREDICTED: signal recognition particle 19 kDa protein [Cucumis sativus] >XP_011651094.1 PREDICTED: signal recognition particle 19 kDa protein [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 1.8e-68
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0 

Query: 55  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 114
           MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI
Sbjct: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60

Query: 115 DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS 174
           DKAYPRDFMQRGRVRVQLKKEDG LSNPAITSRKQLMLR+AELVPRHPGRTKKQEPASSS
Sbjct: 61  DKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVPRHPGRTKKQEPASSS 120

Query: 175 TAGPSKGKGGRKKK 189
           TAGPSKGKGGRKKK
Sbjct: 121 TAGPSKGKGGRKKK 134

[Close]
BLAST of MELO3C006747.2 vs. NCBI nr
Match: XP_022979984.1 (signal recognition particle 19 kDa protein [Cucurbita maxima])

HSP 1 Score: 263.1 bits (671), Expect = 7.4e-67
Identity = 130/134 (97.01%), Postives = 131/134 (97.76%), Query Frame = 0 

Query: 55  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 114
           MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI
Sbjct: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60

Query: 115 DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS 174
           DKAYPRDFMQRGRVRV LKKEDGTLSNPAI SRKQLMLR+AELVPRHPGR KKQEPASSS
Sbjct: 61  DKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRIAELVPRHPGRIKKQEPASSS 120

Query: 175 TAGPSKGKGGRKKK 189
           TAGPSKGKGGRKKK
Sbjct: 121 TAGPSKGKGGRKKK 134

[Close]
BLAST of MELO3C006747.2 vs. NCBI nr
Match: XP_022955603.1 (signal recognition particle 19 kDa protein [Cucurbita moschata])

HSP 1 Score: 262.7 bits (670), Expect = 9.6e-67
Identity = 129/134 (96.27%), Postives = 131/134 (97.76%), Query Frame = 0 

Query: 55  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 114
           MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI
Sbjct: 1   MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60

Query: 115 DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS 174
           DKAYPRDFMQRGRVRV LKKEDGTLSNPAI SRKQLMLR+AELVPRHPGR KKQEPASSS
Sbjct: 61  DKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRIAELVPRHPGRIKKQEPASSS 120

Query: 175 TAGPSKGKGGRKKK 189
           TAGPSKGKGGRKKK
Sbjct: 121 TAGPSKGKGGRKKK 134

[Close]
BLAST of MELO3C006747.2 vs. TAIR10
Match: AT1G48160.1 (signal recognition particle 19 kDa protein, putative / SRP19, putative)

HSP 1 Score: 183.3 bits (464), Expect = 1.3e-46
Identity = 84/107 (78.50%), Postives = 93/107 (86.92%), Query Frame = 0 

Query: 55  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 114
           MD    NIK+WVV+YP+YINSKKT+AEGRRI VSK+CENP C EI DCC HLKLP A+EI
Sbjct: 1   MDSGTINIKKWVVIYPVYINSKKTVAEGRRISVSKSCENPNCIEISDCCKHLKLPSAVEI 60

Query: 115 DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRH 162
           DKAYPRDFMQ GRVRVQLK+EDGTL NPAITSRK LM ++AELVPRH
Sbjct: 61  DKAYPRDFMQVGRVRVQLKREDGTLLNPAITSRKHLMQKIAELVPRH 107

[Close]
BLAST of MELO3C006747.2 vs. Swiss-Prot
Match: sp|P49964|SRP19_ORYSJ (Signal recognition particle 19 kDa protein OS=Oryza sativa subsp. japonica OX=39947 GN=SRP19 PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.5e-50
Identity = 94/128 (73.44%), Postives = 113/128 (88.28%), Query Frame = 0 

Query: 61  NIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPR 120
           +IK+W V+YP+Y+NSKKT+AEGRRI   KAC +PTC EI DCCSHLK+P AIE+DKAYPR
Sbjct: 9   SIKKWNVIYPVYLNSKKTVAEGRRIASGKACPDPTCVEIADCCSHLKIPHAIELDKAYPR 68

Query: 121 DFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSSTAGPSK 180
           DF Q GRVRVQLKK+DG+  NPAI ++KQLM+++AELVP+H GRTKKQEPA+SSTAG SK
Sbjct: 69  DFFQVGRVRVQLKKDDGSPVNPAIKTKKQLMIQIAELVPKHHGRTKKQEPAASSTAGTSK 128

Query: 181 GKGGRKKK 189
           GKGG+KKK
Sbjct: 129 GKGGKKKK 136

[Close]
BLAST of MELO3C006747.2 vs. Swiss-Prot
Match: sp|Q943Z6|SRP19_ARATH (Signal recognition particle 19 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SRP19 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.4e-45
Identity = 84/107 (78.50%), Postives = 93/107 (86.92%), Query Frame = 0 

Query: 55  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 114
           MD    NIK+WVV+YP+YINSKKT+AEGRRI VSK+CENP C EI DCC HLKLP A+EI
Sbjct: 1   MDSGTINIKKWVVIYPVYINSKKTVAEGRRISVSKSCENPNCIEISDCCKHLKLPSAVEI 60

Query: 115 DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRH 162
           DKAYPRDFMQ GRVRVQLK+EDGTL NPAITSRK LM ++AELVPRH
Sbjct: 61  DKAYPRDFMQVGRVRVQLKREDGTLLNPAITSRKHLMQKIAELVPRH 107

[Close]
BLAST of MELO3C006747.2 vs. Swiss-Prot
Match: sp|Q9D7A6|SRP19_MOUSE (Signal recognition particle 19 kDa protein OS=Mus musculus OX=10090 GN=Srp19 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.3e-24
Identity = 66/131 (50.38%), Postives = 84/131 (64.12%), Query Frame = 0 

Query: 64  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP---- 123
           R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     
Sbjct: 14  RFIFIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNAFLEKNKMYSREWN 73

Query: 124 RDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQ---EPASSSTA 183
           RD   RGRVRVQLK+EDG+L      SRK +ML VAE++P+   RT+K    +P      
Sbjct: 74  RDVQFRGRVRVQLKQEDGSLCLVQFPSRKSVMLYVAEMIPKLKTRTQKSGGADPILQQGE 133

Query: 184 GPSKGKGGRKK 188
           G  KGKG +KK
Sbjct: 134 GSKKGKGKKKK 144

[Close]
BLAST of MELO3C006747.2 vs. Swiss-Prot
Match: sp|P09132|SRP19_HUMAN (Signal recognition particle 19 kDa protein OS=Homo sapiens OX=9606 GN=SRP19 PE=1 SV=3)

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-23
Identity = 66/131 (50.38%), Postives = 83/131 (63.36%), Query Frame = 0 

Query: 64  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP---- 123
           R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     
Sbjct: 14  RFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSREWN 73

Query: 124 RDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSST---A 183
           RD   RGRVRVQLK+EDG+L      SRK +ML  AE++P+   RT+K   A  S     
Sbjct: 74  RDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQKTGGADQSLQQGE 133

Query: 184 GPSKGKGGRKK 188
           G  KGKG +KK
Sbjct: 134 GSKKGKGKKKK 144

[Close]
BLAST of MELO3C006747.2 vs. Swiss-Prot
Match: sp|Q5RBR1|SRP19_PONAB (Signal recognition particle 19 kDa protein OS=Pongo abelii OX=9601 GN=SRP19 PE=1 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-23
Identity = 66/131 (50.38%), Postives = 83/131 (63.36%), Query Frame = 0 

Query: 64  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP---- 123
           R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     
Sbjct: 14  RFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSREWN 73

Query: 124 RDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSST---A 183
           RD   RGRVRVQLK+EDG+L      SRK +ML  AE++P+   RT+K   A  S     
Sbjct: 74  RDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQKTGGADQSLQQGE 133

Query: 184 GPSKGKGGRKK 188
           G  KGKG +KK
Sbjct: 134 GSKKGKGKKKK 144

[Close]
BLAST of MELO3C006747.2 vs. TrEMBL
Match: tr|A0A0A0L5F9|A0A0A0L5F9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171080 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 5.0e-72
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 50  EFGRNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLP 109
           EFGRNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLP
Sbjct: 63  EFGRNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLP 122

Query: 110 FAIEIDKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQE 169
           FAIEIDKAYPRDFMQRGRVRVQLKKEDG LSNPAITSRKQLMLR+AELVPRHPGRTKKQE
Sbjct: 123 FAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVPRHPGRTKKQE 182

Query: 170 PASSSTAGPSKGKGGRKKK 189
           PASSSTAGPSKGKGGRKKK
Sbjct: 183 PASSSTAGPSKGKGGRKKK 201

[Close]
BLAST of MELO3C006747.2 vs. TrEMBL
Match: tr|A0A1S3AYC2|A0A1S3AYC2_CUCME (signal recognition particle 19 kDa protein OS=Cucumis melo OX=3656 GN=LOC103483920 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.3e-69
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0 

Query: 55  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 114
           MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI
Sbjct: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60

Query: 115 DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS 174
           DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS
Sbjct: 61  DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS 120

Query: 175 TAGPSKGKGGRKKK 189
           TAGPSKGKGGRKKK
Sbjct: 121 TAGPSKGKGGRKKK 134

[Close]
BLAST of MELO3C006747.2 vs. TrEMBL
Match: tr|A0A2I4HIM3|A0A2I4HIM3_9ROSI (signal recognition particle 19 kDa protein isoform X1 OS=Juglans regia OX=51240 GN=LOC109018317 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 4.9e-59
Identity = 115/141 (81.56%), Postives = 126/141 (89.36%), Query Frame = 0 

Query: 49  LEFGRNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKL 108
           L +  +  G++PNIK+W V YP+YINSKKT+AEGRRI VS ACENPTCAEI DCC HLKL
Sbjct: 9   LNWSMDGGGDVPNIKKWTVFYPVYINSKKTVAEGRRISVSNACENPTCAEIADCCGHLKL 68

Query: 109 PFAIEIDKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQ 168
           PFAIEIDKAYPRDFMQRGRVRV LKKEDGTL NPAI+SRKQLMLRVAELVPRHPGR KKQ
Sbjct: 69  PFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLCNPAISSRKQLMLRVAELVPRHPGRVKKQ 128

Query: 169 EPASSSTAGPSK-GKGGRKKK 189
           EP+S+STAGPSK GKGGRKK+
Sbjct: 129 EPSSTSTAGPSKSGKGGRKKR 149

[Close]
BLAST of MELO3C006747.2 vs. TrEMBL
Match: tr|A0A2I4HIM7|A0A2I4HIM7_9ROSI (signal recognition particle 19 kDa protein isoform X2 OS=Juglans regia OX=51240 GN=LOC109018317 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.1e-58
Identity = 114/133 (85.71%), Postives = 123/133 (92.48%), Query Frame = 0 

Query: 57  GEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDK 116
           G++PNIK+W V YP+YINSKKT+AEGRRI VS ACENPTCAEI DCC HLKLPFAIEIDK
Sbjct: 5   GDVPNIKKWTVFYPVYINSKKTVAEGRRISVSNACENPTCAEIADCCGHLKLPFAIEIDK 64

Query: 117 AYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSSTA 176
           AYPRDFMQRGRVRV LKKEDGTL NPAI+SRKQLMLRVAELVPRHPGR KKQEP+S+STA
Sbjct: 65  AYPRDFMQRGRVRVLLKKEDGTLCNPAISSRKQLMLRVAELVPRHPGRVKKQEPSSTSTA 124

Query: 177 GPSK-GKGGRKKK 189
           GPSK GKGGRKK+
Sbjct: 125 GPSKSGKGGRKKR 137

[Close]
BLAST of MELO3C006747.2 vs. TrEMBL
Match: tr|A0A067JVS4|A0A067JVS4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19072 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.1e-58
Identity = 115/135 (85.19%), Postives = 124/135 (91.85%), Query Frame = 0 

Query: 55  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 114
           MDG +PNIK+W+VLYPIYINSKKTIAEGRRI  +KACENPTC EIGDCCSHLKLPFAIEI
Sbjct: 2   MDGNLPNIKKWIVLYPIYINSKKTIAEGRRISTTKACENPTCVEIGDCCSHLKLPFAIEI 61

Query: 115 DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS 174
           DKAYPRDFMQ GRVRV LK+EDGTL NPAI +RKQLML +AELVPRHPGRTKKQEPAS+S
Sbjct: 62  DKAYPRDFMQIGRVRVLLKREDGTLYNPAIPTRKQLMLHIAELVPRHPGRTKKQEPASTS 121

Query: 175 TAGPSK-GKGGRKKK 189
            AGPSK GKGGRKK+
Sbjct: 122 GAGPSKSGKGGRKKR 136

The following BLAST results are available for this feature:
BLAST of MELO3C006747.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57200.17.6e-7298.56hypothetical protein Csa_3G171080 [Cucumis sativus][more]
XP_008438988.13.5e-69100.00PREDICTED: signal recognition particle 19 kDa protein [Cucumis melo] >XP_0084389... [more]
XP_004147628.11.8e-6898.51PREDICTED: signal recognition particle 19 kDa protein [Cucumis sativus] >XP_0116... [more]
XP_022979984.17.4e-6797.01signal recognition particle 19 kDa protein [Cucurbita maxima][more]
XP_022955603.19.6e-6796.27signal recognition particle 19 kDa protein [Cucurbita moschata][more]
BLAST of MELO3C006747.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G48160.11.3e-4678.50signal recognition particle 19 kDa protein, putative / SRP19, putative[more]
BLAST of MELO3C006747.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P49964|SRP19_ORYSJ1.5e-5073.44Signal recognition particle 19 kDa protein OS=Oryza sativa subsp. japonica OX=39... [more]
sp|Q943Z6|SRP19_ARATH2.4e-4578.50Signal recognition particle 19 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SR... [more]
sp|Q9D7A6|SRP19_MOUSE5.3e-2450.38Signal recognition particle 19 kDa protein OS=Mus musculus OX=10090 GN=Srp19 PE=... [more]
sp|P09132|SRP19_HUMAN1.2e-2350.38Signal recognition particle 19 kDa protein OS=Homo sapiens OX=9606 GN=SRP19 PE=1... [more]
sp|Q5RBR1|SRP19_PONAB1.2e-2350.38Signal recognition particle 19 kDa protein OS=Pongo abelii OX=9601 GN=SRP19 PE=1... [more]
BLAST of MELO3C006747.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L5F9|A0A0A0L5F9_CUCSA5.0e-7298.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171080 PE=4 SV=1[more]
tr|A0A1S3AYC2|A0A1S3AYC2_CUCME2.3e-69100.00signal recognition particle 19 kDa protein OS=Cucumis melo OX=3656 GN=LOC1034839... [more]
tr|A0A2I4HIM3|A0A2I4HIM3_9ROSI4.9e-5981.56signal recognition particle 19 kDa protein isoform X1 OS=Juglans regia OX=51240 ... [more]
tr|A0A2I4HIM7|A0A2I4HIM7_9ROSI1.1e-5885.71signal recognition particle 19 kDa protein isoform X2 OS=Juglans regia OX=51240 ... [more]
tr|A0A067JVS4|A0A067JVS4_JATCU1.1e-5885.19Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19072 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:00083127S RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0048500signal recognition particle
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: INTERPRO
TermDefinition
IPR002778Signal_recog_particle_SRP19
IPR036521SRP19-like_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006614 SRP-dependent cotranslational protein targeting to membrane
biological_process GO:0006617 SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition
biological_process GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation
cellular_component GO:0048500 signal recognition particle
cellular_component GO:0005786 signal recognition particle, endoplasmic reticulum targeting
molecular_function GO:0008312 7S RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006747.2.1MELO3C006747.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036521Signal recognition particle, subunit SRP19-like superfamilyGENE3DG3DSA:3.30.56.30coord: 55..173
e-value: 2.3E-44
score: 152.6
IPR036521Signal recognition particle, subunit SRP19-like superfamilySUPERFAMILYSSF69695SRP19coord: 60..163
IPR002778Signal recognition particle, SRP19 subunitPFAMPF01922SRP19coord: 67..161
e-value: 1.5E-31
score: 109.1
IPR002778Signal recognition particle, SRP19 subunitPANTHERPTHR17453SIGNAL RECOGNITION PARTICLE 19 KD PROTEINcoord: 54..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..188

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006747.2Csa3G171080Cucumber (Chinese Long) v2cumedB223
MELO3C006747.2CSPI03G15310Wild cucumber (PI 183967)cpimedB224
MELO3C006747.2Cucsa.252210Cucumber (Gy14) v1cgymedB432
MELO3C006747.2CmaCh14G015620Cucurbita maxima (Rimu)cmamedB273
MELO3C006747.2CmoCh14G015980Cucurbita moschata (Rifu)cmomedB260
MELO3C006747.2Lsi05G013910Bottle gourd (USVL1VR-Ls)lsimedB397
MELO3C006747.2Cp4.1LG03g12000Cucurbita pepo (Zucchini)cpemedB693
MELO3C006747.2CsGy3G015380Cucumber (Gy14) v2cgybmedB201
MELO3C006747.2Cla021824Watermelon (97103) v1medwmB447
MELO3C006747.2ClCG05G006830Watermelon (Charleston Gray)medwcgB416
MELO3C006747.2Cla97C05G088450Watermelon (97103) v2medwmbB423
MELO3C006747.2Bhi01G000814Wax gourdmedwgoB530
MELO3C006747.2Carg19599Silver-seed gourdcarmedB0292
MELO3C006747.2CsaV3_3G015480Cucumber (Chinese Long) v3cucmedB230
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006747.2Cucurbita maxima (Rimu)cmamedB398
MELO3C006747.2Cucurbita maxima (Rimu)cmamedB863
MELO3C006747.2Cucurbita moschata (Rifu)cmomedB385
MELO3C006747.2Cucurbita moschata (Rifu)cmomedB857
MELO3C006747.2Cucurbita pepo (Zucchini)cpemedB170
MELO3C006747.2Cucurbita pepo (Zucchini)cpemedB951
MELO3C006747.2Melon (DHL92) v3.6.1medmedB049
MELO3C006747.2Bottle gourd (USVL1VR-Ls)lsimedB032
MELO3C006747.2Watermelon (Charleston Gray)medwcgB437
MELO3C006747.2Silver-seed gourdcarmedB0075
MELO3C006747.2Silver-seed gourdcarmedB0749
MELO3C006747.2Wax gourdmedwgoB517