MELO3C006747 (gene) Melon (DHL92) v3.5.1

NameMELO3C006747
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSignal recognition particle 19 kDa protein
Locationchr6 : 5654826 .. 5663265 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGAAAATAGAAAGAAAAATCCTTTTCCGCCTCACCCCATTTTCCTCGCTCAATTTCTCCCATTGTCGTAGTTCGGTCGGAACAGTAAAATCAGATCTCTGTTTAGCTTCTCGATTCGCCATTCTTAATCAATTGATTCTTGATTTGGTAGGTACGTAACTTGTTTCTTACGATCTGGTGTTTTCAGATTGTTATTCTTTTGCTCTATAGAATTTCGTAGGCAGTACAGTAATTGGCATGCCATATGAGGAATTGATTCCGTTTTTTGTCATTTTGATGGCAATGATCAGAAAACTGAGTTCTTCTTAGTGAGGAATTTGTTAAGTAGTTGACATCCTGTTCAATTAGGCGATTTTTAATTGCTTGAATATAATATGTTTCTTTTTGTTTTATATTTGATTAAACGTGCATTGTGATAGGAATTTGGTCGGAATATGGATGGAGAAATTCCCAACATAAAGAGATGGGTAGTGTTGTATCCCATTTATATAAATTCAAAGAAAACAATTGCTGAAGGAAGACGTATAGGTGTTAGCAAAGCTTGTGAGAATCCTACGTGTGCTGAGATTGGGGATTGCTGCAGTCATCTCAAACTGCCCTTTGCTATTGAGGTTTTTCTAGCAATTATCTGTCATTGATAAAGATCTTACTTTCTCGTTAATTTTTGTTCTTCCTGCTGCCTGTCTGTGTTGAAGGTAGCTGCTGCAGCCTGCATTGAGTTTATGTGAACGTGTGATAATTGATAGAACGTGTTAATTGGGTTGTTTTCTTATATCATTAAGAAAATCAACATTCAAACTAAATCCAAAAATCATTTAGATGTTTGGTTCCTTCGGGGACATGATAATTTAAACCATGTTGGGTAGCCATTTTGTGTTTTAAACGTATGCTTGTTTTCTTCGAATTTTCTTATCATGATTTTCACATTTGAATTCTTAGTCAAATCTAAAAACAAAAACTAAGTTAGAGAAAAATACCTTTTTTTAGTGTTCGAAACTCGGCTTGATTTTTGAAAACATCGGTGGAAAGTGGACAACATAACATGCAAATTCAGAGCTGGAAGTAGAGTTGATAATCTTAGTTTTCAAAGTGTAAAAAAACCAAATGATCATCTGATGGGGCATTATGAATTCACAACCAATAGCTATAAAGTTAACAGTTCTGATTTGTCTTGCATTTTTGCTTTTGTAGCTGAAAATCCACATCTTTTTTCCTTTCAATAGAAAAACAAAGCGAAGTTTTTTGGTTTATATTTACAGCATTCCTGCAGATTGATAAAGCATATCCTCGTGATTTCATGCAAAGAGGGAGAGTGCGGGTTCAGCTGAAGAAGGAGGATGGAACCCTGTCCAATCCAGCTATTACTTCGAGTAAGGCTTTTGCCAGTCTCTTGAAAAAGATTTCTTTCGGATCTTTCTCGTTCCAAAGGAGATATTTAATTTAAAATCTTTTTTGGATTTCAAACCATAGAATTTAAAATTATTTCTTGAACTTTTTTGGTTCAAACCGAGAGTAAAATTTCAAGCAGTTGTCATGTGAGAATGGTCAGTGTGTGCAAGCTAACCTAGACACTCAGTTTTCTAGAAAAGATAGTGTATTACCCAATGGTATTTTGGTCAATTCATCAAGATTGTTGCATAACTTTATGGTTTTTACCTGAAGTGGATTTATAAAGATGAAATTAGGCCATAAAGAAACATTGGAGGCTAGCCAAAAAGGAGAGGTGCTCCCTGAGGGTGAATTCTTCTTCCCATGGATAGACAATAGCGAAAGAATTGTCTATTCTTCGTCAACAAATTACTAACAAACTATTAAATCAAACACATCATACTTATTAACTAAAGAAAATTATTGCTTCTAAATTATTTTTTCAGCAATCATCCCATTTACTAAAAGGGAATTTTTCCTCCAGTTTGATTGAAACACCCTGAAAATTCTGTTTGAGGTTTGTTTCAAATCCAAAGTGGTAACAGCATAGGTCTAATTGGAATGAAACAAAATCCCAGTTTCCACCCTTTTTTTCTGCCTTGGGCCTTAGTGTTAAACTTCCTTCCCACCTACAACAATATCAGCCAAACAGCACACACAACCACAGTAATATTCCAGCAGAATTCACAGAGAATATAATATATATTATAATGAAAGGAGAGAATAGCTGTAGTTATATTTATATATTGAATAACAGTTCACCAGCCACAAAAGAGTATCAAAACCAAAGGAACTCAGCCAAATAAGAGGGCTGCACTCTCCACCATGAACAAGGTTCACACAAAATGCCTAATGACAAAGATGATCAACCCTAACACAAAAAGCTCCTATATATATTCCTATATATATACTATAGCTCCTGCTGCCATGTGTCATGAGGACCACTGGCCATCCTAACTACCAAGCTGTCTAGGTGGAATTCCCTTTTTTACCCCTTCTCTTGTAAACTTGAGTGATTGGAGGCCTAGCAATACCCCCATGGAGAAGAGCCACCTTGTCCTCAAGGTGGAAATTTGGAAATTGATGTCGAAGCAGTGCGTAGGACTCCCATGTTGCTTCATGGCTTGGTTGATCCTTTCATTGTACCAAATATTCCCAATCACGTTCAGCCTCGTTCTAGCGAAGTTGGGTCACGTTTTCCGGTTCCAACACTAACTCCATTTGATCATTTATCATTGCGATGTTCGGATAAACTTGATGTTTGTCTCCTACTGCTTTCTTAAGTTGCGATACATGGAAGATAGGGTGTATTTTGGCAGTTTCCGGAAGGCCCAACAGGTAGGTGACCTCTCCCACTCTACCCAACACCGTATATGGTCCAAAATACCTTGGCGATAATTTTTCACAACGTTTTTTCACTACTGATTGCTGTCTATAAGGCTGCAATTTTAAGTATACTCTGTCCCCAATGTCAAACACCACATCTCGGCGATGGACATTGGCAAATTTCTTCATTTGTTCTTGGGCGTGCTGCAAATGTCTCTTCAACGCTGTCAGCATCTCATCTCGAGATTGCAATTGATGCTCCACCGAATCATTTGGCGTTGTCCTGGTTTGACCATACGAAATGATAGGAGGAGGAGGCTGTCCATAAACTACTGCATAGGGGGTACTTTTGATAGACGATTGGTAGTTGGTATTGTACCAATACTCAGCCCATGCCACCTTATCACTACACGTCTTTTGCTTCTCTTGGCAAAAACATCTTAAATAAAGTTTCGAGTTGTTAACGACCTCCGTTTGTCCATCGGTTTGGGGATGGTATGTTGTGCTCCGCTTTAGTTGAGTCCCTTGTAAACGGAATAACTCTTGCCAAAAGTGGCTTAAGAAGACTCGGCCGCGGTCGGATACTATCGAGCGGGGATATCCATGGAGGTGCACTACCTCTTTGATGAACACCATAGCCACTATTTTAGCCGAAAACGGGTGACCCAAGGTAATAAAGTGAGCATATTTGCTTAGGCGATCAACTACCACCAATATCGTGTCGAACCCCTTGGAACGTGGTAGGCCCTCCACAAAATCCATGGAAATATCTTCCCGAATATGGTTGGGAATAGGGAGAGGTTGTAACAGCCCGGCCGGAGATAACGCTTGGACCTTGTTCTGCTGGCAAACATGACATTGATCCACATATTGCTTGATGTCCTTCTTCATCCCTTCCCAAAACAATTCAGCTGCTATCCTTTTGAAAGTGCGTAGCTGTCCGGAATGTCCCTCAAGGACCGAGTCATGGAAAGTGTGTAATATAGTAGGGATGAAGCTCGAAGTCCTCGAAAGAACTAATCTGCCCTTATAAAACAGCTTACCTTGGCGAACCGTATATCGGGGAACGCAGACCGGATCCGCCACAATTTTGTCAAATATGGCCTTTAACTTTTCATTCTCTTGCACCTCTTTTTCGATCACTGTAATGTCCAACAAGGAGGGGACAGTAATGGCATTTAACTCAGCCTCAATTGGGATACGGGACAAGGCGTCCGCAACTTTGTTTTCGGGTCCAGCTTTATAGCGTATTTCAAAATCAAATCCGACCAGCTTTATCAACCACTTTTGCACACCGGGTATTATTTTTCTTTGCTCCAGGATTTGTCTCAACGCTTTCTGATCAGTATATACCACAAATCGATGCCCTAAAAGGTAATGCCGCCATTTTTCCACCGGCAATACTATGGCCATCAGCTCCCTTTCGTAAACAGATTTTTCTCGAGCTGTTTCTGATAGTTTTTGGCTGAAATACACGATTGGCCTTTTGCTCTGCGATAACATAGCTCCCAACCCGATCCCTGATGCATCGGTTTCTACTTCAAAGGGTAGCGGAAGTCGGGTAATGCTAACACGGGAAATGTTACCATGGCTCTCTTAAGTTGTTCAAACGCTTTCGTTGCCTCTTCCGACCAATGCAAATTATTCTTCTTGGTTAGCTTCGTAAGTGGTGTAGCAATGACGCCATACTTTGCTACAAACCGACGGTAATACCCGGTCAGCCCCAAAAACCCCTGAAGCTCCCGTATATTCTTCGATATCAGCCACTCTAGCATGGCCTTAATCTTCTCCTAATCAGCTTCAACTCCCTTGGCCGACACCCAATGGCCTAAGTATTCAATTCGATCCTTCGCAAAATGACATTTCTTCCGGTTAGCAAAAAGGTAATGTTGTCTCAACAGCTGGAACACCACAGTGAGATGCTCTAGGTGTGTTTCCACGTCCCTGCTGTACATCAGAATGTCGTCAAAAAATACCAGCAAGAATTTACGTAAATAAGGTCGAAAAACCTGATTCATCAGTGCTTGGAATGTCGCGGGTGCATTGGTGAGGCCGAAATGCATGACTAGGAACTCGTAATGGCCCTCGTGTGTTCTGAAAGCTGTCTTGCTTACATCTTCATCCCGCACCCGGATTTGATGGTACCCGAATTTCAAGTCTATTTTAGAGAAGATACTCGCTCCACTTAGCTCATCCAGCAGCTCATCGATCATGGGAATAGGGAACTTATTCGGTACAGTAGCTCGGTTTAAAGCACGATAATCGATGCAAAACTGCCATCCCCCATCCTTCTTTTTTACCAAGATAACCAGACTGGAAAAGAGGCTGGTGCTAGGTCTTATAATTCCCAAAGCCAGCATGTCATTCACCAATCTTTCGATCTCGTTTTTCTGGGCATGTGGGTAACGGTATGGCCTCACATTAATGGGATCCGTACCTTCTTTCAACTGGATCCTATGGTCAATTTGTCGCATCGGGGGCAAACCGTCGGGCATTTCAAATATATCACTGAATTCCTGCGGTAGTTGTTCAAATTCTGGTTGGTAGTCTTCCACGGAATCTGTCACTACTAACTCCAGATCCATCTTGAAAATGCCCATGGCTTTAAAATTAACTAAAAATCTTTGATCATCCGATTGCCACGTTTTAACTAATACTTTCAAGGATATTTCCATTCTGGTCAGCGAAGGATCCCCTTTTAGGATTACCTTAGTATCTTCGACAACAAAATTCATGGTAAGGGCTTTCCAATCCACTGTCATTGCTCCTTGTTTTTGCAGCCACTGCATCCCAAGCACCATATCTAGGTTACCCAACTCCAGTGGCAAAAAATCCTCTACTATGGTTATCACTGGCAAACCCACGGTGATACCTTTACACATTTCTCGCCCTTGCACCGCCTTCTCGGACCCCATAATGACCCCATAATTCGTTATTGCCGCCATGGGTAAATTGAGGCTCTCTACTAGCTTCAGGGAGATAAAATTATGGGTAGCCCCACAATCCACCATGATCACTATTTCTCGGTCCTCCACCCTTCCTTTTATCTTGAACGTACCCGGTGCTGTCAAACCCACAACGAAGTTCAGCGATAACTCTACCATCGGACTGACTTCAACCATCTCTCCCTCGTGCGTACTGTCTACCATTTCAACATCTTCTAATTCGTCTGCAACCACACAGAGGCGAAGCTTTTTGTTTTTGCAGCGATGACCTTTGCTAAATGGTTCGTCGCATCGATAACACAACCCCTTTTCACGTCGTGCTTGCAGTTCAGAATCCGTCCACCCATCCCTGTTGCGCCGTTTTGTGGGTTGCTCGCCTGGTTTAGACTCGTAGGGATCCTTTCGGCCAACGTCACGATTTTAGTCGAAGGGATTTCCGAATTTTTTGGCGCGTGTTTTTGGGCCGGTTTCCCATCCTTAGCATATGGGCTGTGCGAGGCCCTAGCTATTTCCAACTTCTCTTCAGCTAATCGGGCCACATCCACCATGTCCTCCAAGCCCACGACCCGCATTGCAAATACTTCAGTTCTAATAACCGGGTCCAACCCTTTCGTGAAGGTCCCTACCAGAACGTCTTCTGCCATTTCCGGTAACGGCGTTGATAGCTCTTCAAATCGCTGCAAATATTCTCCCACCGAGCCCTCATGTTTTATTGCCAAGAATCGCGCGCAACCCGTTCCATATTCCCTATTACAAAAACGATTGTACATTCTCTCTTTTAATTCTTTCCACGATCGGAAACGTTTCCTATTCTCTGCCCAACGGAACCAGCACAGTCCCTTTCCTTCCATACTGACTATTGCTATCTTTAACTTCTCTTGCTCATTTAGAAGGTGCATCTGAAAGTAGTATTCCGCTTTATAAATCCATCCATCCGGGTCTTCTCCATTAAAAACCGGCATCTCCAGCTTTTTAAATTTTATCCGATCTTGCCCTGCCCCTGGTTCTAAACTCAAAGAGGTTTCCCCCTCCTCGTCTCCATCGACCAAGTCTTCCGTTCGAATTTTCCGTTTTCCCGTACTCACTCTGGTCAGTTCAAAACCACCCGGCTGTCTCTGGCAATCTTCATACATTTCGGTTAACATAGCGTGCATTTTCTCCATCGTCTTCTCTAGGACAGGTATTCGTTGAACCTCCTTTTTGATTGCTTCAATCTCAGCTTCCGAAGCATCCAAGCACTCTTTGATTAGTTTTTGCATCATTTTCTTCCACCTCCCAGGTGTCGAATGGCTCTGATACCAATGTTAAACTTCCTTCCCACCTACAACGATATCAGCCAAACAGCACACACAACCACAGTAATATTCCAGCAGAATTCACAGAGAATATAATATATATTATAATGAAAGGAGAGAATAGCTGTAGTTATATTTATATATTGAATAACAGTTCACCAGCCACAAAAGAGTATCAAAACCAAAGGAACTCAGCCAAACAAGAGGGCTGCACTCTCCACCATGAACAAGGTTCATACAAAATGCCTAATGACAAAGATGATCAACCCTAACACAAAAAGCTCCTATATATATTCCTATATATATACTATAGCTCCTGCTGCCATGTGTCATGAGGACCACTGGCCATCCTAACTACCAAGCTGTCTAGGTGGAATTCCCCTTTTTACCCCTTCTCTTGTAAACTTGAGTGATTCGAGGCCTAGCACTTAGATTTTGTGGAACTACCTTTCACAGATCATATCAATTAGTTATAGCGATTATTTGTGGGTGGGGGATTCTGCTAAATCTATATTTTGAACTCTACTGCTAGATTAACCAAGCAGCTAGTCCCTACTATTGTATCAGTTAAAGTAGTTTGGATAACTGTATTTATCTAACAGATGCTACAATTTGTCAAACTTTTTTCTAAAAGAAAGGGTTTTTCTTTTTGTTAAATTATAAGTTTAACCAGTGAACTTTTATATTTGTACCTACTTGGTCCTTCAACTCTATAAATTGTTTCGATATGTTAAAATCTTATTCTTATTAAACACCTAATTGAAGATATATAAACTTATTAAACACAAAATTGCAACTTCAAGGATATCCTTATAATTTAACCTAAATGTTTCAAAGTTATTCCCCTCCAAGTTCTTATTATCAATAAAATACCATAATTATTACGATTTTACATATGAGATATCTGGGTTTGCAGGAAAACAACTGATGCTTCGTGTAGCCGAACTTGTTCCTAGACATCCTGGGAGGACTAAGAAGCAGGAGCCGGCATCCTCATCAACAGCAGGACCTTCAAAAGGCAAGGGTGGAAGAAAGAAGAAATAGTTGCATTGCCATTATGAAATTTTTAGAATCAGATTGTTATCAACCAGGCAGGCGGTTTCGTTTTCAGGTCTTAGTTCTTAATTATTAACAACCTTTGAGTATTGGTGTTCTACCCCGGCCCTCATCCAAAACGAAAAACTAACACAGTGGTCTGAAAGTTTTTGTGAAATGTCATCGATACTTTTTCTTTAATGGTCGATTAAAAAAAAAAAAAAAAGTCAGGAAAAAGGTATTTGTGACAATTTTTTAAGTGTTACCAAATATCACATTTGGTGTAACATGGGTTTGTTTTGAACAATTTTGTAAAATAGTGGATCAAGAAGTTTTACTAAGATAAAGTTTCATGTTGGACAAAAGGATAGTGGATGGGAATTAAGTTGAATGGTCCACTTTTTTTAGAA

mRNA sequence

AGAGAAAATAGAAAGAAAAATCCTTTTCCGCCTCACCCCATTTTCCTCGCTCAATTTCTCCCATTGTCGTAGTTCGGTCGGAACAGTAAAATCAGATCTCTGTTTAGCTTCTCGATTCGCCATTCTTAATCAATTGATTCTTGATTTGGAATTTGGTCGGAATATGGATGGAGAAATTCCCAACATAAAGAGATGGGTAGTGTTGTATCCCATTTATATAAATTCAAAGAAAACAATTGCTGAAGGAAGACGTATAGGTGTTAGCAAAGCTTGTGAGAATCCTACGTGTGCTGAGATTGGGGATTGCTGCAGTCATCTCAAACTGCCCTTTGCTATTGAGATTGATAAAGCATATCCTCGTGATTTCATGCAAAGAGGGAGAGTGCGGGTTCAGCTGAAGAAGGAGGATGGAACCCTGTCCAATCCAGCTATTACTTCGAGAAAACAACTGATGCTTCGTGTAGCCGAACTTGTTCCTAGACATCCTGGGAGGACTAAGAAGCAGGAGCCGGCATCCTCATCAACAGCAGGACCTTCAAAAGGCAAGGGTGGAAGAAAGAAGAAATAGTTGCATTGCCATTATGAAATTTTTAGAATCAGATTGTTATCAACCAGGCAGGCGGTTTCGTTTTCAGGTCTTAGTTCTTAATTATTAACAACCTTTGAGTATTGGTGTTCTACCCCGGCCCTCATCCAAAACGAAAAACTAACACAGTGGTCTGAAAGTTTTTGTGAAATGTCATCGATACTTTTTCTTTAATGGTCGATTAAAAAAAAAAAAAAAAGTCAGGAAAAAGGTATTTGTGACAATTTTTTAAGTGTTACCAAATATCACATTTGGTGTAACATGGGTTTGTTTTGAACAATTTTGTAAAATAGTGGATCAAGAAGTTTTACTAAGATAAAGTTTCATGTTGGACAAAAGGATAGTGGATGGGAATTAAGTTGAATGGTCCACTTTTTTTAGAA

Coding sequence (CDS)

ATGGATGGAGAAATTCCCAACATAAAGAGATGGGTAGTGTTGTATCCCATTTATATAAATTCAAAGAAAACAATTGCTGAAGGAAGACGTATAGGTGTTAGCAAAGCTTGTGAGAATCCTACGTGTGCTGAGATTGGGGATTGCTGCAGTCATCTCAAACTGCCCTTTGCTATTGAGATTGATAAAGCATATCCTCGTGATTTCATGCAAAGAGGGAGAGTGCGGGTTCAGCTGAAGAAGGAGGATGGAACCCTGTCCAATCCAGCTATTACTTCGAGAAAACAACTGATGCTTCGTGTAGCCGAACTTGTTCCTAGACATCCTGGGAGGACTAAGAAGCAGGAGCCGGCATCCTCATCAACAGCAGGACCTTCAAAAGGCAAGGGTGGAAGAAAGAAGAAATAG

Protein sequence

MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK*
BLAST of MELO3C006747 vs. Swiss-Prot
Match: SRP19_ORYSJ (Signal recognition particle 19 kDa protein OS=Oryza sativa subsp. japonica GN=SRP19 PE=1 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.5e-52
Identity = 94/128 (73.44%), Postives = 111/128 (86.72%), Query Frame = 1

Query: 7   NIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPR 66
           +IK+W V+YP+Y+NSKKT+AEGRRI   KAC +PTC EI DCCSHLK+P AIE+DKAYPR
Sbjct: 9   SIKKWNVIYPVYLNSKKTVAEGRRIASGKACPDPTCVEIADCCSHLKIPHAIELDKAYPR 68

Query: 67  DFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSSTAGPSK 126
           DF Q GRVRVQLKK+DG+  NPAI ++KQLM+++AELVP+H GRTKKQEPA+SSTAG SK
Sbjct: 69  DFFQVGRVRVQLKKDDGSPVNPAIKTKKQLMIQIAELVPKHHGRTKKQEPAASSTAGTSK 128

Query: 127 GKGGRKKK 135
           GKGG+KKK
Sbjct: 129 GKGGKKKK 136

BLAST of MELO3C006747 vs. Swiss-Prot
Match: SRP19_ARATH (Signal recognition particle 19 kDa protein OS=Arabidopsis thaliana GN=SRP19 PE=1 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.6e-51
Identity = 101/145 (69.66%), Postives = 113/145 (77.93%), Query Frame = 1

Query: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60
           MD    NIK+WVV+YP+YINSKKT+AEGRRI VSK+CENP C EI DCC HLKLP A+EI
Sbjct: 1   MDSGTINIKKWVVIYPVYINSKKTVAEGRRISVSKSCENPNCIEISDCCKHLKLPSAVEI 60

Query: 61  DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQE----- 120
           DKAYPRDFMQ GRVRVQLK+EDGTL NPAITSRK LM ++AELVPRHP R KKQE     
Sbjct: 61  DKAYPRDFMQVGRVRVQLKREDGTLLNPAITSRKHLMQKIAELVPRHPERVKKQEAQKAK 120

Query: 121 ----PASSSTAGPS--KGKGGRKKK 135
                A++ST+G S   GKGG+KK+
Sbjct: 121 KQEPQATTSTSGTSSKSGKGGKKKR 145

BLAST of MELO3C006747 vs. Swiss-Prot
Match: SRP19_MOUSE (Signal recognition particle 19 kDa protein OS=Mus musculus GN=Srp19 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-25
Identity = 66/131 (50.38%), Postives = 82/131 (62.60%), Query Frame = 1

Query: 10  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP---- 69
           R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     
Sbjct: 14  RFIFIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNAFLEKNKMYSREWN 73

Query: 70  RDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQ---EPASSSTA 129
           RD   RGRVRVQLK+EDG+L      SRK +ML VAE++P+   RT+K    +P      
Sbjct: 74  RDVQFRGRVRVQLKQEDGSLCLVQFPSRKSVMLYVAEMIPKLKTRTQKSGGADPILQQGE 133

Query: 130 GPSKGKGGRKK 134
           G  KGKG +KK
Sbjct: 134 GSKKGKGKKKK 144

BLAST of MELO3C006747 vs. Swiss-Prot
Match: SRP19_PONAB (Signal recognition particle 19 kDa protein OS=Pongo abelii GN=SRP19 PE=1 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 2.6e-25
Identity = 66/131 (50.38%), Postives = 81/131 (61.83%), Query Frame = 1

Query: 10  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP---- 69
           R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     
Sbjct: 14  RFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSREWN 73

Query: 70  RDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSST---A 129
           RD   RGRVRVQLK+EDG+L      SRK +ML  AE++P+   RT+K   A  S     
Sbjct: 74  RDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQKTGGADQSLQQGE 133

Query: 130 GPSKGKGGRKK 134
           G  KGKG +KK
Sbjct: 134 GSKKGKGKKKK 144

BLAST of MELO3C006747 vs. Swiss-Prot
Match: SRP19_HUMAN (Signal recognition particle 19 kDa protein OS=Homo sapiens GN=SRP19 PE=1 SV=3)

HSP 1 Score: 116.3 bits (290), Expect = 2.6e-25
Identity = 66/131 (50.38%), Postives = 81/131 (61.83%), Query Frame = 1

Query: 10  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP---- 69
           R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     
Sbjct: 14  RFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSREWN 73

Query: 70  RDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSST---A 129
           RD   RGRVRVQLK+EDG+L      SRK +ML  AE++P+   RT+K   A  S     
Sbjct: 74  RDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQKTGGADQSLQQGE 133

Query: 130 GPSKGKGGRKK 134
           G  KGKG +KK
Sbjct: 134 GSKKGKGKKKK 144

BLAST of MELO3C006747 vs. TrEMBL
Match: A0A0A0L5F9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171080 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 1.8e-70
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 1

Query: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60
           MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI
Sbjct: 68  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 127

Query: 61  DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS 120
           DKAYPRDFMQRGRVRVQLKKEDG LSNPAITSRKQLMLR+AELVPRHPGRTKKQEPASSS
Sbjct: 128 DKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVPRHPGRTKKQEPASSS 187

Query: 121 TAGPSKGKGGRKKK 135
           TAGPSKGKGGRKKK
Sbjct: 188 TAGPSKGKGGRKKK 201

BLAST of MELO3C006747 vs. TrEMBL
Match: A0A067JVS4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19072 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 1.7e-60
Identity = 115/135 (85.19%), Postives = 124/135 (91.85%), Query Frame = 1

Query: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60
           MDG +PNIK+W+VLYPIYINSKKTIAEGRRI  +KACENPTC EIGDCCSHLKLPFAIEI
Sbjct: 2   MDGNLPNIKKWIVLYPIYINSKKTIAEGRRISTTKACENPTCVEIGDCCSHLKLPFAIEI 61

Query: 61  DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS 120
           DKAYPRDFMQ GRVRV LK+EDGTL NPAI +RKQLML +AELVPRHPGRTKKQEPAS+S
Sbjct: 62  DKAYPRDFMQIGRVRVLLKREDGTLYNPAIPTRKQLMLHIAELVPRHPGRTKKQEPASTS 121

Query: 121 TAGPSK-GKGGRKKK 135
            AGPSK GKGGRKK+
Sbjct: 122 GAGPSKSGKGGRKKR 136

BLAST of MELO3C006747 vs. TrEMBL
Match: B9IEE2_POPTR (Signal recognition particle 19 kDa family protein OS=Populus trichocarpa GN=POPTR_0015s04780g PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.1e-59
Identity = 115/135 (85.19%), Postives = 123/135 (91.11%), Query Frame = 1

Query: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60
           MDG +PNIK+WVVLYP+YINSKKTIAEGRRI V KACENPTC EIGDCCSHLKLPFAIEI
Sbjct: 2   MDGGVPNIKKWVVLYPVYINSKKTIAEGRRISVEKACENPTCVEIGDCCSHLKLPFAIEI 61

Query: 61  DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS 120
           DKAYPRDFMQ GRVRV LK+EDG+LSNPAI SRKQLML VAELVPRHPGRTKKQEPAS+S
Sbjct: 62  DKAYPRDFMQVGRVRVLLKREDGSLSNPAIPSRKQLMLHVAELVPRHPGRTKKQEPASTS 121

Query: 121 TAGPSK-GKGGRKKK 135
            A  SK GKGG+KK+
Sbjct: 122 NAATSKSGKGGKKKR 136

BLAST of MELO3C006747 vs. TrEMBL
Match: D7T671_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g00570 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.5e-59
Identity = 112/135 (82.96%), Postives = 122/135 (90.37%), Query Frame = 1

Query: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60
           MDGE+PNIK+W+V YP+YINSKKTIAEGRR+  SKACENPTC EIGDCCSHLKLPFAIEI
Sbjct: 78  MDGEVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCVEIGDCCSHLKLPFAIEI 137

Query: 61  DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS 120
           DKAYPRDFMQRGRVRV LKKEDGTL NPAI+SRK+LM  VAELVPRHPGR KKQEPAS+S
Sbjct: 138 DKAYPRDFMQRGRVRVLLKKEDGTLYNPAISSRKELMRHVAELVPRHPGRVKKQEPASTS 197

Query: 121 TAGPSK-GKGGRKKK 135
             G SK GKGG+KK+
Sbjct: 198 NTGSSKSGKGGKKKR 212

BLAST of MELO3C006747 vs. TrEMBL
Match: D7T624_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g00020 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.2e-59
Identity = 112/135 (82.96%), Postives = 121/135 (89.63%), Query Frame = 1

Query: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60
           MDGE+PNIK+W+V YP+YINSKKTIAEGRR+  SKACENPTCAEIGDCCSHLKLPFAIEI
Sbjct: 35  MDGEVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCAEIGDCCSHLKLPFAIEI 94

Query: 61  DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS 120
           DKAYPRDFMQRGRVRV LKKEDGTL NPAI+S K LM  VAELVPRHPGR KKQEPAS+S
Sbjct: 95  DKAYPRDFMQRGRVRVLLKKEDGTLYNPAISSHKDLMRHVAELVPRHPGRVKKQEPASTS 154

Query: 121 TAGPSK-GKGGRKKK 135
             G SK GKGG+KK+
Sbjct: 155 NTGSSKSGKGGKKKR 169

BLAST of MELO3C006747 vs. TAIR10
Match: AT1G48160.1 (AT1G48160.1 signal recognition particle 19 kDa protein, putative / SRP19, putative)

HSP 1 Score: 203.4 bits (516), Expect = 9.0e-53
Identity = 101/145 (69.66%), Postives = 113/145 (77.93%), Query Frame = 1

Query: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60
           MD    NIK+WVV+YP+YINSKKT+AEGRRI VSK+CENP C EI DCC HLKLP A+EI
Sbjct: 1   MDSGTINIKKWVVIYPVYINSKKTVAEGRRISVSKSCENPNCIEISDCCKHLKLPSAVEI 60

Query: 61  DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQE----- 120
           DKAYPRDFMQ GRVRVQLK+EDGTL NPAITSRK LM ++AELVPRHP R KKQE     
Sbjct: 61  DKAYPRDFMQVGRVRVQLKREDGTLLNPAITSRKHLMQKIAELVPRHPERVKKQEAQKAK 120

Query: 121 ----PASSSTAGPS--KGKGGRKKK 135
                A++ST+G S   GKGG+KK+
Sbjct: 121 KQEPQATTSTSGTSSKSGKGGKKKR 145

BLAST of MELO3C006747 vs. NCBI nr
Match: gi|659077020|ref|XP_008438988.1| (PREDICTED: signal recognition particle 19 kDa protein [Cucumis melo])

HSP 1 Score: 275.4 bits (703), Expect = 5.3e-71
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1

Query: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60
           MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI
Sbjct: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60

Query: 61  DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS 120
           DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS
Sbjct: 61  DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS 120

Query: 121 TAGPSKGKGGRKKK 135
           TAGPSKGKGGRKKK
Sbjct: 121 TAGPSKGKGGRKKK 134

BLAST of MELO3C006747 vs. NCBI nr
Match: gi|449459788|ref|XP_004147628.1| (PREDICTED: signal recognition particle 19 kDa protein [Cucumis sativus])

HSP 1 Score: 273.1 bits (697), Expect = 2.6e-70
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 1

Query: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60
           MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI
Sbjct: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60

Query: 61  DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS 120
           DKAYPRDFMQRGRVRVQLKKEDG LSNPAITSRKQLMLR+AELVPRHPGRTKKQEPASSS
Sbjct: 61  DKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVPRHPGRTKKQEPASSS 120

Query: 121 TAGPSKGKGGRKKK 135
           TAGPSKGKGGRKKK
Sbjct: 121 TAGPSKGKGGRKKK 134

BLAST of MELO3C006747 vs. NCBI nr
Match: gi|700202067|gb|KGN57200.1| (hypothetical protein Csa_3G171080 [Cucumis sativus])

HSP 1 Score: 273.1 bits (697), Expect = 2.6e-70
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 1

Query: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60
           MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI
Sbjct: 68  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 127

Query: 61  DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS 120
           DKAYPRDFMQRGRVRVQLKKEDG LSNPAITSRKQLMLR+AELVPRHPGRTKKQEPASSS
Sbjct: 128 DKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVPRHPGRTKKQEPASSS 187

Query: 121 TAGPSKGKGGRKKK 135
           TAGPSKGKGGRKKK
Sbjct: 188 TAGPSKGKGGRKKK 201

BLAST of MELO3C006747 vs. NCBI nr
Match: gi|449460339|ref|XP_004147903.1| (PREDICTED: signal recognition particle 19 kDa protein-like [Cucumis sativus])

HSP 1 Score: 264.6 bits (675), Expect = 9.3e-68
Identity = 130/135 (96.30%), Postives = 131/135 (97.04%), Query Frame = 1

Query: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60
           MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEI
Sbjct: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEI 60

Query: 61  DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPA-SS 120
           DKAYPRDFMQRGRVRV LKKEDGTLSNPAITSRKQLMLR+AELVPRHPGRTKKQEPA SS
Sbjct: 61  DKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPRHPGRTKKQEPASSS 120

Query: 121 STAGPSKGKGGRKKK 135
           STAGPSKGKGGRKKK
Sbjct: 121 STAGPSKGKGGRKKK 135

BLAST of MELO3C006747 vs. NCBI nr
Match: gi|1009137619|ref|XP_015886153.1| (PREDICTED: signal recognition particle 19 kDa protein [Ziziphus jujuba])

HSP 1 Score: 241.9 bits (616), Expect = 6.5e-61
Identity = 117/135 (86.67%), Postives = 126/135 (93.33%), Query Frame = 1

Query: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEI 60
           MDG++PNIK+WVV YP+YINSKKTIAEGRRI +SKACENPTCAEIGDCCSH KLPFAIEI
Sbjct: 1   MDGDVPNIKKWVVFYPVYINSKKTIAEGRRICLSKACENPTCAEIGDCCSHFKLPFAIEI 60

Query: 61  DKAYPRDFMQRGRVRVQLKKEDGTLSNPAITSRKQLMLRVAELVPRHPGRTKKQEPASSS 120
           DKAYPRDFMQ GRVRV LKKEDGTL NPAI+SRKQLMLRVAELVPRHPGR KKQEPAS+S
Sbjct: 61  DKAYPRDFMQIGRVRVLLKKEDGTLYNPAISSRKQLMLRVAELVPRHPGRAKKQEPASTS 120

Query: 121 TAGPSK-GKGGRKKK 135
           TAG SK GKGG+KK+
Sbjct: 121 TAGSSKSGKGGKKKR 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
SRP19_ORYSJ2.5e-5273.44Signal recognition particle 19 kDa protein OS=Oryza sativa subsp. japonica GN=SR... [more]
SRP19_ARATH1.6e-5169.66Signal recognition particle 19 kDa protein OS=Arabidopsis thaliana GN=SRP19 PE=1... [more]
SRP19_MOUSE1.2e-2550.38Signal recognition particle 19 kDa protein OS=Mus musculus GN=Srp19 PE=1 SV=1[more]
SRP19_PONAB2.6e-2550.38Signal recognition particle 19 kDa protein OS=Pongo abelii GN=SRP19 PE=1 SV=2[more]
SRP19_HUMAN2.6e-2550.38Signal recognition particle 19 kDa protein OS=Homo sapiens GN=SRP19 PE=1 SV=3[more]
Match NameE-valueIdentityDescription
A0A0A0L5F9_CUCSA1.8e-7098.51Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171080 PE=4 SV=1[more]
A0A067JVS4_JATCU1.7e-6085.19Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19072 PE=4 SV=1[more]
B9IEE2_POPTR1.1e-5985.19Signal recognition particle 19 kDa family protein OS=Populus trichocarpa GN=POPT... [more]
D7T671_VITVI1.5e-5982.96Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g00570 PE=4 SV=... [more]
D7T624_VITVI3.2e-5982.96Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g00020 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT1G48160.19.0e-5369.66 signal recognition particle 19 kDa protein, putative / SRP19, putati... [more]
Match NameE-valueIdentityDescription
gi|659077020|ref|XP_008438988.1|5.3e-71100.00PREDICTED: signal recognition particle 19 kDa protein [Cucumis melo][more]
gi|449459788|ref|XP_004147628.1|2.6e-7098.51PREDICTED: signal recognition particle 19 kDa protein [Cucumis sativus][more]
gi|700202067|gb|KGN57200.1|2.6e-7098.51hypothetical protein Csa_3G171080 [Cucumis sativus][more]
gi|449460339|ref|XP_004147903.1|9.3e-6896.30PREDICTED: signal recognition particle 19 kDa protein-like [Cucumis sativus][more]
gi|1009137619|ref|XP_015886153.1|6.5e-6186.67PREDICTED: signal recognition particle 19 kDa protein [Ziziphus jujuba][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002778Signal_recog_particle_SRP19
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Molecular Function
TermDefinition
GO:00083127S RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0048500signal recognition particle
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006614 SRP-dependent cotranslational protein targeting to membrane
biological_process GO:0006617 SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition
biological_process GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation
cellular_component GO:0048500 signal recognition particle
cellular_component GO:0005786 signal recognition particle, endoplasmic reticulum targeting
molecular_function GO:0008312 7S RNA binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU48999melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006747T1MELO3C006747T1mRNA
MELO3C006747T2MELO3C006747T2mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU48999MU48999transcribed_cluster