MELO3C006216 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006216
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionB3 domain-containing protein
Locationchr6 : 1777983 .. 1780912 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGCTTCTGTAAGTGATTTGTACTGAAAAACGGTCCGCAGATGCAGTCAGAAAGGAATCCTCCGACAGAGCTTCCAACAATAGAGCCGCAAAATGGAGAAACTATGCCCCTTTCAGGCAAACCCTACCATGCTTTTATTCTTTCTAAATCGCATGTTGCTCCCATATATAATTTGGTAAGTTCTTCCTCTCATTTAAATCACTCAGAGGTTCGAGAATAGTTAGAGTTACGTGGTACGCTGGATTTGCTAGAAAGTTGAAAGTTGCTGATTAGCTTGGACCGTTTATGGCTGAAATTTTGAAGTGAATCTAACAATAGTCAAGCATTATGTTGTAACAAACAAAACTTGAGGGAGACACAAAGATCATTAACCTAGTTTAGTGCATGATCACATACTATCGGTGCATGATCACATACTACGGGGGCATTACGCTTAGTGAAAGAAACTTTCCATGTAAAGGGTTAAACAATTACAACTAAATATCTCAAAGGTTCTCCTACGGGGATTCATGTATAACCTACTTTTCAATTTCAACTTAGGCTCTCCCGAAAATTTGAGATCCCCTTACTCCCACAAGTACACTTCTCCCAAACTTTGTTTGAGTTCCCCTCAAAACAAACTTACTTAGAGTCCCTCTAGGTGTGAGGTTCCTCATCTTTATAAAATAATTTTTCTTAAACTAAGTATAAAATCCTCTCAATACAATTACAATGGAACTTAGGCTTCTGTAGATATGAGAGGTACTCTTTTGCACTTAAGTGATCGACAACAAATGACACTTCAGCCTAGTCTAAATGACTATTGGCAACATCCTCAACAGCGAGGTTCAGAAAGTTCACTATCAGTACATAAAAGAGTTCGACATGAATGTTCTTTGAAAAACTTAAATCATGTTTTCTATTGGACTGAAAGAAAATCTGTTACACTACGCAGCATGATGCTTGGCATAGTACAAAACATGTTGTAGAACATGTTAATCAAGTTATGCCAGTAACAAGATCAGTCAATCAGTCTGTCGTAATAATGACCAAGCTAGAAAGTAGTTGACTAGTTTGAGGGATCATCCATAGTTTTGGCATCTTTTTTGTTATTATTATTTCTTAAAGAAACATTTCAAGAGAAACTTGCAAGATTAGCTAGCCCGGAAACTATTCCAAGAAAAGTTCAAAAAAATAATTGAAAACTATTATAAAAACAGTTCAGAGCAAAAATTTGGAAAAATGAGTTCAGAATTTCAGATAGCTGCTGTAAAAGTTGGCCTTCTATTATTTGGTTTTTTTTTTTCTTTTTAATATTTATTTTGAGGACACTCATTCGGAATCACATGCACAGTGACATTAACCTTTAGAGATCGTTCAATCACAAATTTAACCAACAAAAACAAACTGTCTTCAAAATAGCCATCACTTTTCTGTTCAGAATCACAATGATTACGACTTGACAGTACCCAATTCTTAGTTAATGGGAAATGCTCAAATTAGGCATTTTTTAAGCATGTAAACAAATCAGTGTTGAAGTGGTATCATGTCTTTATTTGTAGGTTTTGCCGGCTAAATTTCATTCTATTTTACCTGCTATTGTCATCCCTGCGGTTCTTTTATGTCGAGGCAAGAAATGGAAGATAGATTATTATGGAAACAGACGTGGTAAGGCACTCGATTCAAAACAGTGGAGGAAATTTGTTAATGATAATTGTCTCAAATCCGGAGATGCTTGTGTATTTGAGCTCTTGGAGTGCAGCAGCAGCATACTTAAATTTAGAGTTCAAATTCTCCGTGGTGACATACCTTTGGAGCTGCACGACAAGTTCAGTGGGGAGACAAAAGAGACCCCCATACACCTTGACTAGCTTCCCTTTGTGTGGTTTCGTAGTTTTCAAAAGTCCCGACTTGTCGACATCATATTGCGGTTCTAGAATCAGACAGCCTATTTGATATTTGTAAGTAATATGTAATCCTGTTTTTTATTATCTCATGAATGTACAACTGAAAAAGTTTTCAAATTTTCATGGTTCTTTTTTTAAAAAAACAAAGTTTTCATTCTATATTTCATTTTCTTTGCATCTGAACTAGGGGGAACCTTCAATACATGTTTTAGGAAGCAGCAGGGGAAACCATAGATCATTATCCACTCATGCTTAGTCAATACTCCTTCCCCTTCTTGTACTGTGTGTTGTTGCAACTTCATTGCTTAAGCACGACTGCTTAAAAGATTGGACATCAAGTGAAGCTAAAGTTCAATGATTGTATTTCAGTAACGTATTTCTTGAGTTTTTTTTAATTTAATTTTATTTATAATAACAATTATTATTCTTTTATCAGCATGAATGTTCTTGGTGCAAACATTACATTGCCCTAGCATAATGTTTTGCTGGAGAATTTTGGGTTGAAGGGTTCGTCCAGTACCATAGCATAATGTTCGTCCAGTCTATGCTTCAAATATGCATATGCACTCGTAGGACTTTCGAGACCCCATATTTCGTCATCCCAAAGATACATGAATTACAGATTATTAAACCCTCTCGAACTTGGTCTCCATATATGTCTTACTTTCATCTTGAATATTTTGCTAGATGTAGTTCAACCAAGATGGTTTTGGTGCTGCAATGAAGTTGTGCTTCCTCGTGAGACGTGCAATGCATTATGTTACTTGTGTTCTTATGCCAAATGCACCAGGGTATATGGTTAATATGTAGATCCATTTTTTATTGTCATGACCGACACATCTTCATATAGTTGTTAAATCTTGAATCTCAATCTATTTCCTCTTTGTATTTCTTCAACCTTCTGCTCTGAAATCTAGATGGCATAAATCTCAATGTTTTCTTT

mRNA sequence

AGGCTTCTGTAAGTGATTTGTACTGAAAAACGGTCCGCAGATGCAGTCAGAAAGGAATCCTCCGACAGAGCTTCCAACAATAGAGCCGCAAAATGGAGAAACTATGCCCCTTTCAGGCAAACCCTACCATGCTTTTATTCTTTCTAAATCGCATGTTGCTCCCATATATAATTTGGTTTTGCCGGCTAAATTTCATTCTATTTTACCTGCTATTGTCATCCCTGCGGTTCTTTTATGTCGAGGCAAGAAATGGAAGATAGATTATTATGGAAACAGACGTGGTAAGGCACTCGATTCAAAACAGTGGAGGAAATTTGTTAATGATAATTGTCTCAAATCCGGAGATGCTTGTGTATTTGAGCTCTTGGAGTGCAGCAGCAGCATACTTAAATTTAGAGTTCAAATTCTCCGTGGTGACATACCTTTGGAGCTGCACGACAAGTTCAGTGGGGAGACAAAAGAGACCCCCATACACCTTGACTAGCTTCCCTTTGTGTGGTTTCGTAGTTTTCAAAAGTCCCGACTTGTCGACATCATATTGCGGTTCTAGAATCAGACAGCCTATTTGATATTTATGTAGTTCAACCAAGATGGTTTTGGTGCTGCAATGAAGTTGTGCTTCCTCGTGAGACGTGCAATGCATTATGTTACTTGTGTTCTTATGCCAAATGCACCAGGGTATATGGTTAATATGTAGATCCATTTTTTATTGTCATGACCGACACATCTTCATATAGTTGTTAAATCTTGAATCTCAATCTATTTCCTCTTTGTATTTCTTCAACCTTCTGCTCTGAAATCTAGATGGCATAAATCTCAATGTTTTCTTT

Coding sequence (CDS)

ATGCAGTCAGAAAGGAATCCTCCGACAGAGCTTCCAACAATAGAGCCGCAAAATGGAGAAACTATGCCCCTTTCAGGCAAACCCTACCATGCTTTTATTCTTTCTAAATCGCATGTTGCTCCCATATATAATTTGGTTTTGCCGGCTAAATTTCATTCTATTTTACCTGCTATTGTCATCCCTGCGGTTCTTTTATGTCGAGGCAAGAAATGGAAGATAGATTATTATGGAAACAGACGTGGTAAGGCACTCGATTCAAAACAGTGGAGGAAATTTGTTAATGATAATTGTCTCAAATCCGGAGATGCTTGTGTATTTGAGCTCTTGGAGTGCAGCAGCAGCATACTTAAATTTAGAGTTCAAATTCTCCGTGGTGACATACCTTTGGAGCTGCACGACAAGTTCAGTGGGGAGACAAAAGAGACCCCCATACACCTTGACTAG
Homology
[Close]
BLAST of MELO3C006216 vs. Swiss-Prot
Match: Y4869_ORYSJ (B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica GN=Os04g0386900 PE=2 SV=3)

HSP 1 Score: 102.4 bits (254), Expect = 4.2e-21
Identity = 58/144 (40.28%), Postives = 79/144 (54.86%), Query Frame = 1 

Query: 7   PPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLC 66
           PP   P    ++G  +PL GKPY   I+ KSHV P + +V+P  F  +LP+   PA L  
Sbjct: 71  PPEPEPEKVARHG-VLPLLGKPYFTCIMCKSHVQPPFQVVVPRSFAPLLPSRTTPATLSW 130

Query: 67  RGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELL---ECSSSILKFRVQIL 126
           RG+ W + + G R  + L++  WR F  DN L+ GD CVFELL         ++FRVQ+L
Sbjct: 131 RGRSWGMRFTGGRLIQRLEA-GWRGFAVDNDLRLGDGCVFELLVGGGGEQERVEFRVQVL 190

Query: 127 RGDIPLELHDKFSGETKETPIHLD 148
           R +IP  +  +  G T  TPI +D
Sbjct: 191 RAEIPARIRGRAGGYTSATPIVID 212

[Close]
BLAST of MELO3C006216 vs. Swiss-Prot
Match: Y6112_ORYSJ (B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica GN=Os06g0112300 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.8e-14
Identity = 52/141 (36.88%), Postives = 73/141 (51.77%), Query Frame = 1 

Query: 7   PPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSIL--PAIVIPAVL 66
           PP    + E     T   +G P+   +++KSH+ P + + +P +F   L  P     AVL
Sbjct: 33  PPPASGSGEDWEATTPLAAGNPFFTALIAKSHLHPKFQMWIPPRFQHRLAEPEARTAAVL 92

Query: 67  LCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLEC-SSSILKFRVQIL 126
              GK W   Y G+ + K LD+  W +F  DN L  GDACVFEL+   ++  L+F+VQIL
Sbjct: 93  HSGGKSWATSYCGHLKMKKLDAG-WSEFAVDNRLLVGDACVFELVAMGAAGGLEFQVQIL 152

Query: 127 RGDIPLELHDKFSGETKETPI 145
           RG +P E+     G T + PI
Sbjct: 153 RGGLPAEVVTS-KGLTSDQPI 171

[Close]
BLAST of MELO3C006216 vs. TrEMBL
Match: A0A0A0L3V3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126890 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 2.4e-76
Identity = 141/147 (95.92%), Postives = 143/147 (97.28%), Query Frame = 1 

Query: 1   MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60
           MQS R PPTELPT+EPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI
Sbjct: 1   MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60

Query: 61  PAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRV 120
           PAVLLCRGKKWKIDY+GNRRGKALDSKQWRKFVNDNCLKSGDA VFELLECSSSILKFRV
Sbjct: 61  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRV 120

Query: 121 QILRGDIPLELHDKFSGETKETPIHLD 148
           QIL GDIPLELHDKFSGETKETPIHLD
Sbjct: 121 QILSGDIPLELHDKFSGETKETPIHLD 147

[Close]
BLAST of MELO3C006216 vs. TrEMBL
Match: M5X861_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025386mg PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 5.9e-30
Identity = 71/139 (51.08%), Postives = 91/139 (65.47%), Query Frame = 1 

Query: 9   TELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRG 68
           T  P IE +  E  PLSGKP+   +L+K+ + P+  LV+P KF + LP+  IP VL  RG
Sbjct: 13  TSNPVIELEGDEFWPLSGKPFFDVVLTKTSIKPMCQLVVPGKFSATLPSCSIPTVLTFRG 72

Query: 69  KKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRVQILRGDIP 128
           K W++ Y+G+   K LD+  W+ F  DN LK GDACVFE LECSS+ L FRVQILRGDIP
Sbjct: 73  KNWEMTYHGSSNYKRLDN--WKAFAIDNNLKVGDACVFEQLECSSTRLVFRVQILRGDIP 132

Query: 129 LELHDKFSGETKETPIHLD 148
            E  DK  G+  + PI L+
Sbjct: 133 SEFLDKLDGDNVDAPIVLE 149

[Close]
BLAST of MELO3C006216 vs. TrEMBL
Match: M5X1G4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012926mg PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 7.7e-30
Identity = 71/139 (51.08%), Postives = 92/139 (66.19%), Query Frame = 1 

Query: 9   TELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRG 68
           T  P IE +  E  PLSGKP+   +L+K+++  +Y LV+P KF + LP+  IP VL+ RG
Sbjct: 12  TSNPVIELEGDEFWPLSGKPFFDVVLTKTNIKRLYQLVVPGKFSATLPSCSIPTVLIFRG 71

Query: 69  KKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRVQILRGDIP 128
           K W++ Y+G+   K LD+  WR F  DN LK GDACVFE LECSS+ L FRVQILRGDI 
Sbjct: 72  KNWEMIYHGSSSHKRLDN--WRAFAVDNNLKVGDACVFEQLECSSTRLVFRVQILRGDIS 131

Query: 129 LELHDKFSGETKETPIHLD 148
            E  DK  G+  + PI L+
Sbjct: 132 SEFLDKLGGDNVDAPIVLE 148

[Close]
BLAST of MELO3C006216 vs. TrEMBL
Match: M5XNL5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020952mg PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-29
Identity = 72/140 (51.43%), Postives = 92/140 (65.71%), Query Frame = 1 

Query: 8   PTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCR 67
           PT  P IE +  E  PLSGKP+   +L+K+ + P+Y LV+P KF++ LP+  I  VL  R
Sbjct: 14  PTSNPVIELEGDEFWPLSGKPFFDVVLTKTTIKPMYQLVVPGKFNATLPSCSIHTVLAFR 73

Query: 68  GKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRVQILRGDI 127
           GK W+I Y+ +   K LD+  WR F  DN LK G ACVFE LECSS+ L FRVQILRGDI
Sbjct: 74  GKNWEIIYHESSSCKRLDN--WRPFAIDNNLKVGGACVFEQLECSSTRLVFRVQILRGDI 133

Query: 128 PLELHDKFSGETKETPIHLD 148
           P E  DK +G+  + PI L+
Sbjct: 134 PSEFLDKLNGDNVDAPIVLE 151

[Close]
BLAST of MELO3C006216 vs. TrEMBL
Match: A5AIM5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020729 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.5e-28
Identity = 70/147 (47.62%), Postives = 95/147 (64.63%), Query Frame = 1 

Query: 1   MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60
           M+      +E P  + Q  E  PL GKPY   +L KSH   +  +VLP K H  +P+ VI
Sbjct: 17  MEESGGQTSEEPATKFQADEIHPLLGKPYFHVVLVKSH---LNQMVLPTKMHPSVPSAVI 76

Query: 61  PAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRV 120
           PAVL+ + K+W++ + G+ R        WR FVNDN LK+GDACVFEL+EC++S +KFRV
Sbjct: 77  PAVLVHQXKRWEMTFNGDHRTHKRFDIGWRTFVNDNNLKAGDACVFELMECNTSNIKFRV 136

Query: 121 QILRGDIPLELHDKFSGETKETPIHLD 148
           QILRGDIP  L D+ +GET +T I ++
Sbjct: 137 QILRGDIPSMLLDRANGETSDTAIVIE 160

[Close]
BLAST of MELO3C006216 vs. NCBI nr
Match: gi|778677528|ref|XP_011650806.1| (PREDICTED: B3 domain-containing protein Os04g0386900-like [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 3.5e-76
Identity = 141/147 (95.92%), Postives = 143/147 (97.28%), Query Frame = 1 

Query: 1   MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60
           MQS R PPTELPT+EPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI
Sbjct: 1   MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60

Query: 61  PAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRV 120
           PAVLLCRGKKWKIDY+GNRRGKALDSKQWRKFVNDNCLKSGDA VFELLECSSSILKFRV
Sbjct: 61  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRV 120

Query: 121 QILRGDIPLELHDKFSGETKETPIHLD 148
           QIL GDIPLELHDKFSGETKETPIHLD
Sbjct: 121 QILSGDIPLELHDKFSGETKETPIHLD 147

[Close]
BLAST of MELO3C006216 vs. NCBI nr
Match: gi|694428103|ref|XP_009341640.1| (PREDICTED: B3 domain-containing protein Os04g0386900-like isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 141.7 bits (356), Expect = 1.0e-30
Identity = 74/140 (52.86%), Postives = 91/140 (65.00%), Query Frame = 1 

Query: 8   PTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCR 67
           PT    IE Q  E  PLS KP+   +++K++V P Y +V+PAKF   LP+  IP VL   
Sbjct: 5   PTSNSMIELQGDEFWPLSEKPFFEVVITKANVKPSYQMVIPAKFQQTLPSCSIPTVLTFG 64

Query: 68  GKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRVQILRGDI 127
           GK W++ Y      +  D+  WR+FVNDN LK GDACVFELLECSS+ L FRVQILRGDI
Sbjct: 65  GKNWEMTYTHGSGQRKFDTN-WREFVNDNNLKVGDACVFELLECSSTKLVFRVQILRGDI 124

Query: 128 PLELHDKFSGETKETPIHLD 148
           P EL  K  GET + PI +D
Sbjct: 125 PSELLGKLKGETVDAPIIID 143

[Close]
BLAST of MELO3C006216 vs. NCBI nr
Match: gi|657949831|ref|XP_008345126.1| (PREDICTED: B3 domain-containing protein Os06g0112300-like [Malus domestica])

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-30
Identity = 74/140 (52.86%), Postives = 92/140 (65.71%), Query Frame = 1 

Query: 8   PTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCR 67
           PT  P IE Q  E  PLS KP+   +++K++V P Y +V+PAKF   LP+  I  VL+  
Sbjct: 5   PTSNPPIELQGDEFWPLSEKPFFEVVIAKANVKPSYQMVIPAKFQQTLPSCSIHTVLMFG 64

Query: 68  GKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRVQILRGDI 127
           GK W++ Y      +  D+  WR+FVNDN LK GDACVFELLECSS+ L FRVQILRGDI
Sbjct: 65  GKNWEMTYTCGSGQRKFDTN-WREFVNDNNLKVGDACVFELLECSSTKLIFRVQILRGDI 124

Query: 128 PLELHDKFSGETKETPIHLD 148
           P EL  K  GET + PI +D
Sbjct: 125 PSELLRKLKGETVDAPIIID 143

[Close]
BLAST of MELO3C006216 vs. NCBI nr
Match: gi|645252559|ref|XP_008232177.1| (PREDICTED: B3 domain-containing protein Os04g0386900-like [Prunus mume])

HSP 1 Score: 139.0 bits (349), Expect = 6.5e-30
Identity = 71/139 (51.08%), Postives = 93/139 (66.91%), Query Frame = 1 

Query: 9   TELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRG 68
           T  P IE +  E  PLSGKP+   +L+K+++  +Y LV+P KF + LP+  +P VL  RG
Sbjct: 6   TSNPVIELEGDEFWPLSGKPFFDVVLTKTNINHLYQLVVPGKFSATLPSCSMPTVLTFRG 65

Query: 69  KKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRVQILRGDIP 128
           K W++ Y+G+   K LD+  W+ FV DN LK GDACVFE LECSS+ L FRVQILRGDIP
Sbjct: 66  KNWEMIYHGSSSHKRLDN--WKAFVIDNNLKVGDACVFEQLECSSTRLVFRVQILRGDIP 125

Query: 129 LELHDKFSGETKETPIHLD 148
            E  DK  G+  + PI L+
Sbjct: 126 SEFLDKLDGDNVDAPIVLE 142

[Close]
BLAST of MELO3C006216 vs. NCBI nr
Match: gi|470135893|ref|XP_004303740.1| (PREDICTED: B3 domain-containing protein Os04g0386900-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 139.0 bits (349), Expect = 6.5e-30
Identity = 71/133 (53.38%), Postives = 88/133 (66.17%), Query Frame = 1 

Query: 14  IEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKI 73
           I+    E  PLSGKP+   IL+KSHV P Y L +PAK HSILP   IP VL   GK W++
Sbjct: 13  IQLHGEEFWPLSGKPFFDIILAKSHVKPSYMLGIPAKLHSILPPCSIPTVLNFAGKSWEM 72

Query: 74  DYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRVQILRGDIPLELHD 133
              G  R   LD + W+ FV+DN LK+GD CVFE++ECS++ L+ RVQILRGDIP EL +
Sbjct: 73  TCGGKHRKHKLDKESWKAFVDDNKLKAGDGCVFEVMECSTTKLELRVQILRGDIPAELLE 132

Query: 134 KFSGETKETPIHL 147
           K  G+  E PI L
Sbjct: 133 KERGDEAEKPIVL 145

The following BLAST results are available for this feature:
BLAST of MELO3C006216 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y4869_ORYSJ4.2e-2140.28B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica GN=Os0... [more]
Y6112_ORYSJ3.8e-1436.88B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica GN=Os0... [more]
BLAST of MELO3C006216 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3V3_CUCSA2.4e-7695.92Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126890 PE=4 SV=1[more]
M5X861_PRUPE5.9e-3051.08Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025386mg PE=4 S... [more]
M5X1G4_PRUPE7.7e-3051.08Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012926mg PE=4 SV=1[more]
M5XNL5_PRUPE1.3e-2951.43Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020952mg PE=4 SV=1[more]
A5AIM5_VITVI1.5e-2847.62Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020729 PE=4 SV=1[more]
BLAST of MELO3C006216 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778677528|ref|XP_011650806.1|3.5e-7695.92PREDICTED: B3 domain-containing protein Os04g0386900-like [Cucumis sativus][more]
gi|694428103|ref|XP_009341640.1|1.0e-3052.86PREDICTED: B3 domain-containing protein Os04g0386900-like isoform X2 [Pyrus x br... [more]
gi|657949831|ref|XP_008345126.1|1.3e-3052.86PREDICTED: B3 domain-containing protein Os06g0112300-like [Malus domestica][more]
gi|645252559|ref|XP_008232177.1|6.5e-3051.08PREDICTED: B3 domain-containing protein Os04g0386900-like [Prunus mume][more]
gi|470135893|ref|XP_004303740.1|6.5e-3053.38PREDICTED: B3 domain-containing protein Os04g0386900-like [Fragaria vesca subsp.... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003340B3_DNA-bd
IPR015300DNA-bd_pseudobarrel_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU48350melon EST collection version 4.0transcribed_cluster
MU50629melon EST collection version 4.0transcribed_cluster
MU54995melon EST collection version 4.0transcribed_cluster
MU57895melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006216T3MELO3C006216T3mRNA
MELO3C006216T2MELO3C006216T2mRNA
MELO3C006216T1MELO3C006216T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU54995MU54995transcribed_cluster
MU57895MU57895transcribed_cluster
MU50629MU50629transcribed_cluster
MU48350MU48350transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006216Csa3G126890Cucumber (Chinese Long) v2cumeB236
MELO3C006216Cla021334Watermelon (97103) v1mewmB461
MELO3C006216ClCG05G002510Watermelon (Charleston Gray)mewcgB427
MELO3C006216Cla97C05G083010Watermelon (97103) v2mewmbB434
MELO3C006216Bhi01G000055Wax gourdmewgoB531
MELO3C006216CSPI03G09800Wild cucumber (PI 183967)cpimeB230
MELO3C006216Cucsa.257390Cucumber (Gy14) v1cgymeB439
MELO3C006216CmaCh06G011520Cucurbita maxima (Rimu)cmameB763
MELO3C006216CmoCh06G011810Cucurbita moschata (Rifu)cmomeB755
MELO3C006216Lsi05G019330Bottle gourd (USVL1VR-Ls)lsimeB378
MELO3C006216Cp4.1LG08g02060Cucurbita pepo (Zucchini)cpemeB813
MELO3C006216CsGy3G009890Cucumber (Gy14) v2cgybmeB200
MELO3C006216Carg06365Silver-seed gourdcarmeB0941
MELO3C006216CsaV3_3G009950Cucumber (Chinese Long) v3cucmeB236
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006216Cucurbita pepo (Zucchini)cpemeB141
MELO3C006216Cucurbita pepo (Zucchini)cpemeB315
MELO3C006216Cucurbita pepo (Zucchini)cpemeB585
MELO3C006216Bottle gourd (USVL1VR-Ls)lsimeB034
MELO3C006216Cucumber (Gy14) v2cgybmeB435
MELO3C006216Silver-seed gourdcarmeB0236
MELO3C006216Silver-seed gourdcarmeB0622
MELO3C006216Silver-seed gourdcarmeB1049
MELO3C006216Cucumber (Chinese Long) v3cucmeB506
MELO3C006216Watermelon (97103) v2mewmbB445
MELO3C006216Wax gourdmewgoB522
MELO3C006216Melon (DHL92) v3.5.1memeB054
MELO3C006216Cucumber (Gy14) v1cgymeB594
MELO3C006216Cucurbita maxima (Rimu)cmameB242
MELO3C006216Cucurbita maxima (Rimu)cmameB343
MELO3C006216Cucurbita maxima (Rimu)cmameB852
MELO3C006216Cucurbita moschata (Rifu)cmomeB230
MELO3C006216Cucurbita moschata (Rifu)cmomeB336
MELO3C006216Cucurbita moschata (Rifu)cmomeB834
MELO3C006216Wild cucumber (PI 183967)cpimeB496
MELO3C006216Cucumber (Chinese Long) v2cumeB494
MELO3C006216Watermelon (Charleston Gray)mewcgB438
MELO3C006216Watermelon (97103) v1mewmB484