Cla97C05G083010 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G083010
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	B3 domain-containing protein
Location	Cla97Chr05 : 2274760 .. 2276735 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGTCACAAAGGGAACCTCCGACAGAGCTTCCAACAATGGAGCCACAAAATGGAGAAAATTTGCCACTTTCAGGCAAACCCTACCATGCTTTTATTCTTTCTAAATCGCACGTCGCTCCCATATGTAATTTGGTAAGTTCTTCCTCTCATGAAAATCACCCAGAAATTTGAGAATAGTTAGAGCTGTAAGGTAAACTGGATTAACTAGAAAGTAGAAACTTGTTGATCAGCTTGGGTTGTGTATGGCTGAATTTTTAAATTGATTATGACTTGGAATGCTTACAAGCGATGTTGTAATGAACAAAACAACTTAAGATCAAACAACAAGAGTAGAGATTGAGAGACACGAAGATTGGTAACCCAGTTCGGTGCAATATCGCCTACTCTGGGGTAGTGTGCCTAGTGAACAGAAACTAAAGAGTATAATTACAATGAAGTACATATCTGATAAACCCCTCTATAGTGACTCACGTATAACCTACTATTCAATTTCAACCCAGGCTCTTCCCAAGTCTGAGATCCCTTTACGTCCACAAATACGCTTCTCCCAAGTTTTGTTTGACATCCCTCTGAAACATATTTACTTAGGAGGCCTAATTGTGAGCTCTCCTCACCTCTATAAAATAGCTTTTCTTAATCTAAGTATGAGATTCCCTCAATGCAATCGAACTTAGGCTCCCTTAAGTAGGAGATACACTTTTTCACTTATAGTGATTGACAATAGATGGAGACACGTCAACCTAGTCTAAATGACTGGCACCAAAACCCTAAACAATGAGGTTCACAAAGTTTACTCTCAGTACATAAGAGAGTTCAAAGAGAACACTCAGTCCATAAGAGAGTTCAACGTGAATGTTCTTTGAATAACTTAACACGTATGTTTTCTCATTCAAAGAGACTAACCCTAACAAAACCAAAAGCCACAAATATATATGGCGCAACCTTGAGAAGATATTCATGTACTTCGAAAATCTTTCTGCCATACTAGGAAAGAAAGCTTGCAAATTTGCACTACACACAATAGCAGATAAGGAAAAAATCTCCAGGCAGATTCTGCACGACGCAGAACATGAAGTTTGACATTATACAAGACATGTTACGAAACATCTTGCTCAAGTTTTGCTGGTAATAAGATTAGTCACTCAGTAAAAATGGCTAATCTAGAAAGCAGTTGACTAGCTTGAGGGATCATTGATGGTTATTGGCATTTTTTTTTTTTTTTTTTGTTATTATTATTTCTTGAAGAAACATCTGAAGAGAAACTTGCAAGATTAGCTAGCCTGGAAACTATTATAAAAACATTTTAGAACAAAATTTTTGTAAAAATGGGTTCAGAATTTCAGATAACTACTCTAAAAGTTGGTCTTTTATTGTTTGATCTTTTCTGGAGAAAAATATTAATTTAAGGACTCTTATTCATTCCTAAATCACAAGCACAGTAACATTAACTTTTAGGGATCGTTCAATCACAAATCTAATCAAATATAGTTTTGCAAACAAAAACACTGTCATCAAAACAACCGTCACTTTTCTGTTCTGAATCACAATTCTTAGGACTTGACAGTACCCAATTCTTAGCTAATGGCAAATGCTCAAATTAGGCATTTTTAAGCATGTAAATAAATCAGCTTAACTGCGAAGTTCTATCATATATTTATTTGTAGGTTTTACCAGCTAAATTCCATTCTATTTTACCTGCTATTGTGATCCCGACGGTTCTTTTCTGTCGAGGCAAGAAATGGAAGATAGATTATTATGGGAACCGACGCGGTAAGGCACTTGATACAAAACAGTGGAGGAAGTTTGTCAATGATAATCGTCTCAAGTCTGGAGATGCTTGTGTATTTGAGCTCATGGAATGCAGCAGCAGCATACTTAAATTTAGAGTTCAAATTCTCAGAGGTGACATCCCTTTACAGCTTCACGACAAGTTCAGTGGGGAGACGAAAGACACCCCCATATACCTTGAGTAG

mRNA sequence

ATGCAGTCACAAAGGGAACCTCCGACAGAGCTTCCAACAATGGAGCCACAAAATGGAGAAAATTTGCCACTTTCAGGCAAACCCTACCATGCTTTTATTCTTTCTAAATCGCACGTCGCTCCCATATGTAATTTGGTTTTACCAGCTAAATTCCATTCTATTTTACCTGCTATTGTGATCCCGACGGTTCTTTTCTGTCGAGGCAAGAAATGGAAGATAGATTATTATGGGAACCGACGCGGTAAGGCACTTGATACAAAACAGTGGAGGAAGTTTGTCAATGATAATCGTCTCAAGTCTGGAGATGCTTGTGTATTTGAGCTCATGGAATGCAGCAGCAGCATACTTAAATTTAGAGTTCAAATTCTCAGAGGTGACATCCCTTTACAGCTTCACGACAAGTTCAGTGGGGAGACGAAAGACACCCCCATATACCTTGAGTAG

Coding sequence (CDS)

ATGCAGTCACAAAGGGAACCTCCGACAGAGCTTCCAACAATGGAGCCACAAAATGGAGAAAATTTGCCACTTTCAGGCAAACCCTACCATGCTTTTATTCTTTCTAAATCGCACGTCGCTCCCATATGTAATTTGGTTTTACCAGCTAAATTCCATTCTATTTTACCTGCTATTGTGATCCCGACGGTTCTTTTCTGTCGAGGCAAGAAATGGAAGATAGATTATTATGGGAACCGACGCGGTAAGGCACTTGATACAAAACAGTGGAGGAAGTTTGTCAATGATAATCGTCTCAAGTCTGGAGATGCTTGTGTATTTGAGCTCATGGAATGCAGCAGCAGCATACTTAAATTTAGAGTTCAAATTCTCAGAGGTGACATCCCTTTACAGCTTCACGACAAGTTCAGTGGGGAGACGAAAGACACCCCCATATACCTTGAGTAG

Protein sequence

MQSQREPPTELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVIPTVLFCRGKKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRVQILRGDIPLQLHDKFSGETKDTPIYLE

Homology

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BLAST of Cla97C05G083010 vs. NCBI nr
Match: XP_011650806.1 (PREDICTED: B3 domain-containing protein Os04g0386900-like [Cucumis sativus] >KGN56625.1 hypothetical protein Csa_3G126890 [Cucumis sativus])

HSP 1 Score: 272.3 bits (695), Expect = 9.5e-70
Identity = 130/147 (88.44%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MQSQREPPTELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVI 60
           MQS R+PPTELPTMEPQNGE +PLSGKPYHAFILSKSHVAPI NLVLPAKFHSILPAIVI
Sbjct: 1   MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60

Query: 61  PTVLFCRGKKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRV 120
           P VL CRGKKWKIDY+GNRRGKALD+KQWRKFVNDN LKSGDA VFEL+ECSSSILKFRV
Sbjct: 61  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRV 120

Query: 121 QILRGDIPLQLHDKFSGETKDTPIYLE 148
           QIL GDIPL+LHDKFSGETK+TPI+L+
Sbjct: 121 QILSGDIPLELHDKFSGETKETPIHLD 147

[Close]

BLAST of Cla97C05G083010 vs. NCBI nr
Match: XP_022974195.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974196.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974197.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975683.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975684.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975685.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima])

HSP 1 Score: 253.8 bits (647), Expect = 3.5e-64
Identity = 116/147 (78.91%), Postives = 131/147 (89.12%), Query Frame = 0


Query: 1   MQSQREPPTELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVI 60
           MQSQ +PPTE   M+PQN   LPLSGKPYH  ILSKSHVAPICN+ LPAKFHS+LPAI+I
Sbjct: 1   MQSQEKPPTEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60

Query: 61  PTVLFCRGKKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRV 120
           P VL+C GKKWKIDYYGNRRGKALDTKQWRKFVNDN LK GDACVFEL+ECSSS+LKFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVLKFRV 120

Query: 121 QILRGDIPLQLHDKFSGETKDTPIYLE 148
           QILRGDIP +LH+KFSGE+++TPI ++
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]

BLAST of Cla97C05G083010 vs. NCBI nr
Match: XP_023539026.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 252.3 bits (643), Expect = 1.0e-63
Identity = 114/147 (77.55%), Postives = 131/147 (89.12%), Query Frame = 0


Query: 1   MQSQREPPTELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVI 60
           MQSQ +PPTE   M+PQN   LPLSGKPYH  ILSKSHVAPICN+ +PAKFHS+LPAI+I
Sbjct: 1   MQSQEKPPTEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFMPAKFHSVLPAIMI 60

Query: 61  PTVLFCRGKKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRV 120
           P VL+C GKKWKIDYYGNRRGKALDTKQWRKFVNDN LK GDACVFEL+ECSSS++KFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRV 120

Query: 121 QILRGDIPLQLHDKFSGETKDTPIYLE 148
           QILRGDIP +LH+KFSGE+++TPI ++
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

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BLAST of Cla97C05G083010 vs. NCBI nr
Match: XP_022941967.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita moschata] >XP_022941973.1 B3 domain-containing protein Os04g0386900-like [Cucurbita moschata])

HSP 1 Score: 250.8 bits (639), Expect = 3.0e-63
Identity = 114/147 (77.55%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 1   MQSQREPPTELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVI 60
           MQSQ +PP E   M+PQN   LPLSGKPYH  ILSKSHVAPICN+ LPAKFHS+LPAI+I
Sbjct: 1   MQSQEKPPPEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60

Query: 61  PTVLFCRGKKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRV 120
           P VL+C GKKWKIDYYGNRRGKALDTKQWRKFVNDN LK GDACVFEL+ECSSS++KFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRV 120

Query: 121 QILRGDIPLQLHDKFSGETKDTPIYLE 148
           QILRGDIP +LH+KFSGE+++TPI ++
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]

BLAST of Cla97C05G083010 vs. NCBI nr
Match: XP_022147119.1 (B3 domain-containing protein Os04g0386900-like [Momordica charantia])

HSP 1 Score: 239.6 bits (610), Expect = 6.8e-60
Identity = 112/147 (76.19%), Postives = 128/147 (87.07%), Query Frame = 0


Query: 1   MQSQREPPTELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVI 60
           MQSQ +PP+E  TMEP+N E  PLS KP+H  IL+KSHVAPI N+ LPAKFHS+LPAIVI
Sbjct: 1   MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVI 60

Query: 61  PTVLFCRGKKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRV 120
             VL+C GK+W +DYYGNRRGK+LDT+ WRKFVNDN LKSGDACVFELMECSSS LKFRV
Sbjct: 61  HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV 120

Query: 121 QILRGDIPLQLHDKFSGETKDTPIYLE 148
           QILRGDIP+QLHDKFSGE+KDTPI ++
Sbjct: 121 QILRGDIPVQLHDKFSGESKDTPIKID 147

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BLAST of Cla97C05G083010 vs. TrEMBL
Match: tr|A0A0A0L3V3|A0A0A0L3V3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126890 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 6.3e-70
Identity = 130/147 (88.44%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MQSQREPPTELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVI 60
           MQS R+PPTELPTMEPQNGE +PLSGKPYHAFILSKSHVAPI NLVLPAKFHSILPAIVI
Sbjct: 1   MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60

Query: 61  PTVLFCRGKKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRV 120
           P VL CRGKKWKIDY+GNRRGKALD+KQWRKFVNDN LKSGDA VFEL+ECSSSILKFRV
Sbjct: 61  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRV 120

Query: 121 QILRGDIPLQLHDKFSGETKDTPIYLE 148
           QIL GDIPL+LHDKFSGETK+TPI+L+
Sbjct: 121 QILSGDIPLELHDKFSGETKETPIHLD 147

[Close]

BLAST of Cla97C05G083010 vs. TrEMBL
Match: tr|A0A251QDS6|A0A251QDS6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G100300 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.2e-32
Identity = 72/139 (51.80%), Postives = 92/139 (66.19%), Query Frame = 0


Query: 9   TELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVIPTVLFCRG 68
           T  P +E +  E  PLSGKP+   +L+K+ + P+C LV+P KF + LP+  IPTVL  RG
Sbjct: 11  TSNPVIELEGDEFWPLSGKPFFDVVLTKTSIKPMCQLVVPGKFSATLPSCSIPTVLTFRG 70

Query: 69  KKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRVQILRGDIP 128
           K W++ Y+G+   K LD   W+ F  DN LK GDACVFE +ECSS+ L FRVQILRGDIP
Sbjct: 71  KNWEMTYHGSSNYKRLD--NWKAFAIDNNLKVGDACVFEQLECSSTRLVFRVQILRGDIP 130

Query: 129 LQLHDKFSGETKDTPIYLE 148
            +  DK  G+  D PI LE
Sbjct: 131 SEFLDKLDGDNVDAPIVLE 147

[Close]

BLAST of Cla97C05G083010 vs. TrEMBL
Match: tr|M5X861|M5X861_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa025386mg PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.2e-32
Identity = 72/139 (51.80%), Postives = 92/139 (66.19%), Query Frame = 0


Query: 9   TELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVIPTVLFCRG 68
           T  P +E +  E  PLSGKP+   +L+K+ + P+C LV+P KF + LP+  IPTVL  RG
Sbjct: 13  TSNPVIELEGDEFWPLSGKPFFDVVLTKTSIKPMCQLVVPGKFSATLPSCSIPTVLTFRG 72

Query: 69  KKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRVQILRGDIP 128
           K W++ Y+G+   K LD   W+ F  DN LK GDACVFE +ECSS+ L FRVQILRGDIP
Sbjct: 73  KNWEMTYHGSSNYKRLD--NWKAFAIDNNLKVGDACVFEQLECSSTRLVFRVQILRGDIP 132

Query: 129 LQLHDKFSGETKDTPIYLE 148
            +  DK  G+  D PI LE
Sbjct: 133 SEFLDKLDGDNVDAPIVLE 149

[Close]

BLAST of Cla97C05G083010 vs. TrEMBL
Match: tr|A0A2P6RZ46|A0A2P6RZ46_ROSCH (Putative transcription factor B3-Domain family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0147401 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 8.3e-30
Identity = 69/135 (51.11%), Postives = 90/135 (66.67%), Query Frame = 0


Query: 13  TMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVIPTVLFCRGKKWK 72
           T++    E  PLSGKPY   IL+K+HV P   L +PAK H ILP+   PTVL   GK W+
Sbjct: 12  TIQLHGEEFWPLSGKPYFDIILAKTHVKPYYKLGIPAKLHPILPSCSFPTVLTFAGKSWE 71

Query: 73  IDYYG-NRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRVQILRGDIPLQL 132
           +   G N++ K LD + W+ F++DN LK+GD CVFE+MECSS+ L  RVQILRGDIP +L
Sbjct: 72  MTCDGSNKKHKGLDKESWKAFIDDNNLKAGDGCVFEVMECSSTKLVLRVQILRGDIPAEL 131

Query: 133 HDKFSGETKDTPIYL 147
            +K  G+  + PI L
Sbjct: 132 LEKEKGDEAEKPIIL 146

[Close]

BLAST of Cla97C05G083010 vs. TrEMBL
Match: tr|A0A2R6RD19|A0A2R6RD19_ACTCH (B3 domain-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc07723 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 8.3e-30
Identity = 73/148 (49.32%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 4   QREPPT----ELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIV 63
           QR+P T    +  T E ++ E  PLSGKPY    + KSH+ P+  LV P K +S+LP   
Sbjct: 35  QRDPKTKKLLDPKTTEFEDDEFWPLSGKPYFHVFVVKSHLKPLYQLVFPKKMYSLLPCSR 94

Query: 64  IPTVLFCRGKKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFR 123
           +P VL   GKKW++ YYG+   K  D + W+ F  DN LK GDACVFE++E SSS LKFR
Sbjct: 95  VPVVLTYCGKKWEMVYYGDSNPKRFD-RNWKNFAIDNDLKLGDACVFEIVEISSSNLKFR 154

Query: 124 VQILRGDIPLQLHDKFSGETKDTPIYLE 148
           VQILRG+ P QL ++  GE  DTPI ++
Sbjct: 155 VQILRGEFPSQLMERVKGEASDTPIIVD 181

[Close]

BLAST of Cla97C05G083010 vs. Swiss-Prot
Match: sp|Q7XLP4|Y4869_ORYSJ (B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0386900 PE=2 SV=3)

HSP 1 Score: 99.0 bits (245), Expect = 4.7e-20
Identity = 52/129 (40.31%), Postives = 73/129 (56.59%), Query Frame = 0


Query: 22  LPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVIPTVLFCRGKKWKIDYYGNRRG 81
           LPL GKPY   I+ KSHV P   +V+P  F  +LP+   P  L  RG+ W + + G R  
Sbjct: 85  LPLLGKPYFTCIMCKSHVQPPFQVVVPRSFAPLLPSRTTPATLSWRGRSWGMRFTGGRLI 144

Query: 82  KALDTKQWRKFVNDNRLKSGDACVFELM---ECSSSILKFRVQILRGDIPLQLHDKFSGE 141
           + L+   WR F  DN L+ GD CVFEL+         ++FRVQ+LR +IP ++  +  G 
Sbjct: 145 QRLEA-GWRGFAVDNDLRLGDGCVFELLVGGGGEQERVEFRVQVLRAEIPARIRGRAGGY 204

Query: 142 TKDTPIYLE 148
           T  TPI ++
Sbjct: 205 TSATPIVID 212

[Close]

BLAST of Cla97C05G083010 vs. Swiss-Prot
Match: sp|Q9LHY9|Y6112_ORYSJ (B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0112300 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-14
Identity = 48/125 (38.40%), Postives = 69/125 (55.20%), Query Frame = 0


Query: 25  SGKPYHAFILSKSHVAPICNLVLPAKFHSIL--PAIVIPTVLFCRGKKWKIDYYGNRRGK 84
           +G P+   +++KSH+ P   + +P +F   L  P      VL   GK W   Y G+ + K
Sbjct: 51  AGNPFFTALIAKSHLHPKFQMWIPPRFQHRLAEPEARTAAVLHSGGKSWATSYCGHLKMK 110

Query: 85  ALDTKQWRKFVNDNRLKSGDACVFELMEC-SSSILKFRVQILRGDIPLQLHDKFSGETKD 144
            LD   W +F  DNRL  GDACVFEL+   ++  L+F+VQILRG +P ++     G T D
Sbjct: 111 KLDA-GWSEFAVDNRLLVGDACVFELVAMGAAGGLEFQVQILRGGLPAEVVTS-KGLTSD 170

Query: 145 TPIYL 147
            PI +
Sbjct: 171 QPILI 173

[Close]

BLAST of Cla97C05G083010 vs. Swiss-Prot
Match: sp|Q8RYD1|REM16_ARATH (B3 domain-containing protein REM16 OS=Arabidopsis thaliana OX=3702 GN=REM16 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.9e-05
Identity = 32/97 (32.99%), Postives = 47/97 (48.45%), Query Frame = 0


Query: 34  LSKSHVAPICNLVLPAKFHSILPAIVI--PTVLFCRGKKW--KIDYYGNRRGKALDTKQW 93
           + +SHV   C L +P K+  +   ++     V+     KW  K + +G R    + T  W
Sbjct: 227 MKRSHVVSKCFLTIPYKW-CVKNMLITRQEVVMQVDQTKWEMKFNIFGARGSGGIST-GW 286

Query: 94  RKFVNDNRLKSGDACVFELMECSSSILKFRVQILRGD 127
           +KFV DN L+ GD CVFE     +  L   V I RG+
Sbjct: 287 KKFVQDNNLREGDVCVFEPANSETKPLHLNVYIFRGE 321

[Close]

BLAST of Cla97C05G083010 vs. Swiss-Prot
Match: sp|Q2QMT5|Y1209_ORYSJ (B3 domain-containing protein LOC_Os12g40090 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0591500 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.9e-05
Identity = 29/95 (30.53%), Postives = 48/95 (50.53%), Query Frame = 0


Query: 26  GKPYHAFILSKSHVAPICNLVLPAKF---------HSILPAIVIPTVLFCRGKKWKIDYY 85
           G P    +L  +HV     L++P +F         H IL  ++ P     R +KW + YY
Sbjct: 223 GNPVFVVVLQTAHVRRRNILIVPTRFAADHLERKSHDIL--LIRPN----RKQKWSVKYY 282

Query: 86  G-NRRGKALDTKQWRKFVNDNRLKSGDACVFELME 111
             +   +  +  +W KF+ +NRL+ G+ C+FELM+
Sbjct: 283 YLSNTTRGFNCHRWIKFIRENRLREGNVCIFELMK 311

[Close]

BLAST of Cla97C05G083010 vs. Swiss-Prot
Match: sp|Q6AV21|Y3982_ORYSJ (B3 domain-containing protein Os03g0619800 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0619800 PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.1e-04
Identity = 30/66 (45.45%), Postives = 36/66 (54.55%), Query Frame = 0


Query: 47  LPAKFHSILPAIVIPTVLFCRGKKWKIDYYGNRR---GKA-LDTKQWRKFVNDNRLKSGD 106
           LP K H  L       VL C+G  W+I+    RR   GK    T  WRKF +DNRL+ GD
Sbjct: 455 LPDKNHQTL-------VLQCKGMIWQINLVVRRRYTKGKRWFLTAGWRKFAHDNRLRVGD 513

Query: 107 ACVFEL 109
            C+FEL
Sbjct: 515 FCLFEL 513

[Close]

BLAST of Cla97C05G083010 vs. TAIR10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.1e-06
Identity = 32/97 (32.99%), Postives = 47/97 (48.45%), Query Frame = 0


Query: 34  LSKSHVAPICNLVLPAKFHSILPAIVI--PTVLFCRGKKW--KIDYYGNRRGKALDTKQW 93
           + +SHV   C L +P K+  +   ++     V+     KW  K + +G R    + T  W
Sbjct: 227 MKRSHVVSKCFLTIPYKW-CVKNMLITRQEVVMQVDQTKWEMKFNIFGARGSGGIST-GW 286

Query: 94  RKFVNDNRLKSGDACVFELMECSSSILKFRVQILRGD 127
           +KFV DN L+ GD CVFE     +  L   V I RG+
Sbjct: 287 KKFVQDNNLREGDVCVFEPANSETKPLHLNVYIFRGE 321

The following BLAST results are available for this feature:

BLAST of Cla97C05G083010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650806.1	9.5e-70	88.44	PREDICTED: B3 domain-containing protein Os04g0386900-like [Cucumis sativus] >KGN...	[more]
XP_022974195.1	3.5e-64	78.91	B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974196....	[more]
XP_023539026.1	1.0e-63	77.55	B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo]	[more]
XP_022941967.1	3.0e-63	77.55	B3 domain-containing protein Os04g0386900-like [Cucurbita moschata] >XP_02294197...	[more]
XP_022147119.1	6.8e-60	76.19	B3 domain-containing protein Os04g0386900-like [Momordica charantia]	[more]

BLAST of Cla97C05G083010 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L3V3\|A0A0A0L3V3_CUCSA	6.3e-70	88.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126890 PE=4 SV=1	[more]
tr\|A0A251QDS6\|A0A251QDS6_PRUPE	5.2e-32	51.80	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G100300 PE=4 SV=1	[more]
tr\|M5X861\|M5X861_PRUPE	5.2e-32	51.80	Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa025386m...	[more]
tr\|A0A2P6RZ46\|A0A2P6RZ46_ROSCH	8.3e-30	51.11	Putative transcription factor B3-Domain family OS=Rosa chinensis OX=74649 GN=Rch...	[more]
tr\|A0A2R6RD19\|A0A2R6RD19_ACTCH	8.3e-30	49.32	B3 domain-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN...	[more]

BLAST of Cla97C05G083010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q7XLP4\|Y4869_ORYSJ	4.7e-20	40.31	B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica OX=399...	[more]
sp\|Q9LHY9\|Y6112_ORYSJ	1.3e-14	38.40	B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica OX=399...	[more]
sp\|Q8RYD1\|REM16_ARATH	1.9e-05	32.99	B3 domain-containing protein REM16 OS=Arabidopsis thaliana OX=3702 GN=REM16 PE=2...	[more]
sp\|Q2QMT5\|Y1209_ORYSJ	1.9e-05	30.53	B3 domain-containing protein LOC_Os12g40090 OS=Oryza sativa subsp. japonica OX=3...	[more]
sp\|Q6AV21\|Y3982_ORYSJ	2.1e-04	45.45	B3 domain-containing protein Os03g0619800 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of Cla97C05G083010 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33280.1	1.1e-06	32.99	AP2/B3-like transcriptional factor family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR015300	DNA-bd_pseudobarrel_sf
IPR003340	B3_DNA-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G083010.1	Cla97C05G083010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 34..126 e-value: 0.0011 score: 28.1
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 34..123 e-value: 2.7E-13 score: 49.5
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 30..126 score: 11.603
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 33..124 e-value: 1.49815E-16 score: 69.6641
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	G3DSA:2.40.330.10		coord: 19..126 e-value: 2.6E-19 score: 71.1
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	SSF101936	DNA-binding pseudobarrel domain	coord: 26..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR31391:SF15	SUBFAMILY NOT NAMED	coord: 17..144
None	No IPR available	PANTHER	PTHR31391	FAMILY NOT NAMED	coord: 17..144

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G083010	Cla021334	Watermelon (97103) v1	wmwmbB206
Cla97C05G083010	Csa3G126890	Cucumber (Chinese Long) v2	cuwmbB204
Cla97C05G083010	MELO3C006216	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G083010	ClCG05G002510	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G083010	CSPI03G09800	Wild cucumber (PI 183967)	cpiwmbB209
Cla97C05G083010	Cucsa.257390	Cucumber (Gy14) v1	cgywmbB452
Cla97C05G083010	CmaCh06G011520	Cucurbita maxima (Rimu)	cmawmbB856
Cla97C05G083010	CmoCh06G011810	Cucurbita moschata (Rifu)	cmowmbB833
Cla97C05G083010	Lsi05G019330	Bottle gourd (USVL1VR-Ls)	lsiwmbB333
Cla97C05G083010	CsGy3G009890	Cucumber (Gy14) v2	cgybwmbB196
Cla97C05G083010	MELO3C006216.2	Melon (DHL92) v3.6.1	medwmbB423
Cla97C05G083010	Carg06365	Silver-seed gourd	carwmbB1008
Cla97C05G083010	CsaV3_3G009950	Cucumber (Chinese Long) v3	cucwmbB206
Cla97C05G083010	Bhi01G000055	Wax gourd	wgowmbB180

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G083010	Watermelon (97103) v2	wmbwmbB131
Cla97C05G083010	Silver-seed gourd	carwmbB0229
Cla97C05G083010	Silver-seed gourd	carwmbB0647
Cla97C05G083010	Silver-seed gourd	carwmbB1130
Cla97C05G083010	Cucumber (Gy14) v2	cgybwmbB437
Cla97C05G083010	Cucumber (Gy14) v1	cgywmbB622
Cla97C05G083010	Cucurbita maxima (Rimu)	cmawmbB005
Cla97C05G083010	Cucurbita maxima (Rimu)	cmawmbB263
Cla97C05G083010	Cucurbita maxima (Rimu)	cmawmbB366
Cla97C05G083010	Cucurbita maxima (Rimu)	cmawmbB916
Cla97C05G083010	Cucurbita moschata (Rifu)	cmowmbB243
Cla97C05G083010	Cucurbita moschata (Rifu)	cmowmbB350
Cla97C05G083010	Cucurbita moschata (Rifu)	cmowmbB890
Cla97C05G083010	Wild cucumber (PI 183967)	cpiwmbB485
Cla97C05G083010	Cucumber (Chinese Long) v3	cucwmbB478
Cla97C05G083010	Cucumber (Chinese Long) v2	cuwmbB460
Cla97C05G083010	Bottle gourd (USVL1VR-Ls)	lsiwmbB020
Cla97C05G083010	Melon (DHL92) v3.6.1	medwmbB116
Cla97C05G083010	Melon (DHL92) v3.5.1	mewmbB125
Cla97C05G083010	Watermelon (Charleston Gray)	wcgwmbB264
Cla97C05G083010	Watermelon (97103) v1	wmwmbB398
Cla97C05G083010	Wax gourd	wgowmbB080