ClCG05G002510 (gene) Watermelon (Charleston Gray)

Overview
NameClCG05G002510
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionB3 domain-containing protein
LocationCG_Chr05 : 2374587 .. 2378497 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCACGTCCCTTTCTCAAGAATGAATGTTCTGAAGAAGGTACGACGACTGAGTGTCTCACCGTCTGCTTGCTTCGAGCTCACAGGTTTGTGAATACTGATCTAATTTCTCCTTTGAATTCCGTTTCCCCTTTGTTCATTCTCCACATTTTGTTTGGATTCCCAGAGAATACTCGTTTAATTTTAAACGTAATTTTTTGTTGCATTTGTTCTGCCAACTTTCATCATCTGCAGGTTTTCTTTTTCCGACCTGTAATCATCAATTTCATCCGTTTCCCCTTTCGCAGGCTTCTGCAAGTGATTTGTACTGAAAAAAAGTCTCCAGATGCAGTCACAAAGGGAACCTCCGACAGAGCTTCCAACAATGGAGCCACAAAATGGAGAAAATTTGCCACTTTCAGGCAAACCCTACCATGCTTTTATTCTTTCTAAATCGCACGTCGCTCCCATATGTAATTTGGTAAGTTCTTCCTCTCATGAAAATCACCCAGAAATTTGAGAATAGTTAGAGCTGTAAGGTAAACTGGATTAACTAGAAAGTAGAAACTTGTTGATCAGCTTGGGTTGTGTATGGCTGAATTTTTAAATTGATTATGACTTGGAATGCTTACAAGCGATGTTGTAATGAACAAAACAACTTAAGATCAAACAACAAGAGTAGAGATTGAGAGACACGAAGATTGGTAACCCAGTTCGGTGCAATATCGCCTACTCTGGGGTAGTGTGCCTAGTGAACAGAAACTAAAGAGTATAATTACAATGAAGTACATATCTGATAAACCCCTCTATAGTGACTCACGTATAACCTACTATTCAATTTCAACCCAGGCTCTTCCCAAGTCTGAGATCCCTTTACGTCCACAAATACGCTTCTCCCAAGTTTTGTTTGACATCCCTCTGAAACATATTTACTTAGGAGGCCTAATTGTGAGCTCTCCTCACCTCTATAAAATAGCTTTTCTTAATCTAAGTATGAGATTCCCTCAATGCAATCGAACTTAGGCTCCCTTAAGTAGGAGATACACTTTTTCACTTATAGTGATTGACAATAGATGGAGACACGTCAACCTAGTCTAAATGACTGGCACCAAAACCCTAAACAATGAGGTTCACAAAGTTTACTCTCAGTACATAAGAGAGTTCAAAGAGAACACTCAGTCCATAAGAGAGTTCAACGTGAATGTTCTTTGAATAACTTAACACGTATGTTTTCTCATTCAAAGAGACTAACCCTAACAAAACCAAAAGCCACAAATATATATGGCGCAACCTTGAGAAGATATTCATGTACTTCGAAAATCTTTCTGCCATACTAGGAAAGAAAGCTTGCAAATTTGCACTACACACAATAGCAGATAAGGAAAAAATCTCCAGGCAGATTCTGCACGACGCAGAACATGAAGTTTGACATTATACAAGACATGTTACGAAACATCTTGCTCAAGTTTTGCTGGTAATAAGATTAGTCACTCAGTAAAAATGGCTAATCTAGAAAGCAGTTGACTAGCTTGAGGGATCATTGATGGTTATTGGCATTTTTTTTTTTTTTTTTTGTTATTATTATTTCTTGAAGAAACATCTGAAGAGAAACTTGCAAGATTAGCTAGCCTGGAAACTATTATAAAAACATTTTAGAACAAAATTTTTGTAAAAATGGGTTCAGAATTTCAGATAACTACTCTAAAAGTTGGTCTTTTATTGTTTGATCTTTTCTGGAGAAAAATATTAATTTAAGGACTCTTATTCATTCCTAAATCACAAGCACAGTAACATTAACTTTTAGGGATCGTTCAATCACAAATCTAATCAAATATAGTTTTGCAAACAAAAACACTGTCATCAAAACAACCGTCACTTTTCTGTTCTGAATCACAATTCTTAGGACTTGACAGTACCCAATTCTTAGCTAATGGCAAATGCTCAAATTAGGCATTTTTAAGCATGTAAATAAATCAGCTTAACTGCGAAGTTCTATCATATATTTATTTGTAGGTTTTACCAGCTAAATTCCATTCTATTTTACCTGCTATTGTGATCCCGACGGTTCTTTTCTGTCGAGGCAAGAAATGGAAGATAGATTATTATGGGAACCGACGCGGTAAGGCACTTGATACAAAACAGTGGAGGAAGTTTGTCAATGATAATCGTCTCAAGTCTGGAGATGCTTGTGTATTTGAGCTCATGGAATGCAGCAGCAGCATACTTAAATTTAGAGTTCAAATTCTCAGAGGTGACATCCCTTTACAGCTTCACGACAAGTTCAGTGGGGAGACGAAAGACACCCCCATATACCTTGAGTAGCTTCCCTTTCTGTGGTTCCTTAGTTTTCAAAAGTTCCAAGTTGTTGACATCATATGTGGTTCTAGAATCAGACAACCCATTTGATATTTGTAAGTAGATACGCAATCCTGTTTTATTATCTAACGAATGCACATGTGAAAAAGTTTTCCAAATTTCATGGTTTTTTTTAATTTTTTTTCTCTTTTCATTCTGTATTTCATTTTCTTTGGATCTGAACTAGAAGGAACCTTCAGTACATGTTTTAGGAACCAGGGGGAAACCATACACGGATGATGGAACAACTCATGCTTACTCATCCCCCTTTCTTGTACTGTGTTGTTGCAACTTCATTGTTTAAGCATGGCTGCTGAAAATATTAAACATTGAGACGAGCATCGGTTTGATCATTATATTTTGTTAGATAATATAATATTAAATTTATCTTTACTCATGAGCTTAAGCTGTTGGGTCAATTAGTGATTTAACATGGTATCACCATATTAAAGCAGGTGGTCTAGGATATCCTGTGTTCAAACTCTTGCAATGTTATTTCTTTCCAAGTAATAATGATTTTCATTTGTTGGATTTTTTACATATTTCAAGTCCACAAGTGGGAGGGAGTGTTAGATGATATATTATTAAATTTAACTTCACCCATCAGTTTAAACTTTTGAGTCAATCGATGATTTAACATATTTCAGTAATGCATTTCCTTTATCAGCATGGATGTTCTTAGTGCAAACATTACATTGCCATGATGTCTTGCTGGATAATTTTGGGTTGAAGGGGAAGTGGTTCATCCATTACCCTATCAGAATGTTGACTAAATTACTCTATACTTTTGGATACCCGTGCTTCAAATATGCATAGGCACATGAAGAAATTTCGAGACTCCATATTTAGTCAACCTAAAGATACATGGAAATGATATCAAGAATTAATCCCAAGTGTGGATTAGAAATTATTTAACCCTCTTGAACAAAGTCTCCAAATGAGTCTTACTTTCATCTTGAATATATACAGTTGTTCAACCTAGATGGTTCTGTTGCTGCGATGAAGTTGTTCTTCCTCATGCATTATGCTACGTGTGTTCTTATGCCAAATTCAACAGGGTATATAGTAAATATGTATAACCAATTTTTTTTTGTCATTGTTATGTGACCCGCACATCTTCTTCATATTGTTGTTGAAATCTTGAATCCCAATTTATTTTCCTCTTTGAATTCCTTCAACCTTCTGCAGGGAAATCTCGGTGCCATAAATCTCCATGTTTCCTGCTCGAGATTGTCCCAACATTATCATCATCATAGTTTTGCATTGATATAACCATTGTTTGACATTGTTTCTATTTTGCTGTGAGAACTTTCAGAAATCTAGACTGCTCACTGATGCACTGAAGACTTTCATGTGGAGACATTTTCTTCGATGCGTTTACGGTAATTCGGTTTCACTCTAATTCAACCTTAAATCTTAGAAGTAATCGCTTGTAAAGGATAACCTTAAATCTTAGAAGTAAACGCTTGTAAAGGATTAAAGACTAGGATAATTGTTGAACTGGTATAGACTTTAGATTCTAACTCTGAATTTGAGTTTGGTGCTGTTGGATTCTATGAGCTGAGCATATGTGCATTTAC

mRNA sequence

TCACGTCCCTTTCTCAAGAATGAATGTTCTGAAGAAGGTACGACGACTGAGTGTCTCACCGTCTGCTTGCTTCGAGCTCACAGAGAATACTCGTTTAATTTTAAACGTAATTTTTTGTTGCATTTGTTCTGCCAACTTTCATCATCTGCAGATGCAGTCACAAAGGGAACCTCCGACAGAGCTTCCAACAATGGAGCCACAAAATGGAGAAAATTTGCCACTTTCAGGCAAACCCTACCATGCTTTTATTCTTTCTAAATCGCACGTCGCTCCCATATGTAATTTGGTTTTACCAGCTAAATTCCATTCTATTTTACCTGCTATTGTGATCCCGACGGTTCTTTTCTGTCGAGGCAAGAAATGGAAGATAGATTATTATGGGAACCGACGCGGTAAGGCACTTGATACAAAACAGTGGAGGAAGTTTGTCAATGATAATCGTCTCAAGTCTGGAGATGCTTGTGTATTTGAGCTCATGGAATGCAGCAGCAGCATACTTAAATTTAGAGTTCAAATTCTCAGAGGTGACATCCCTTTACAGCTTCACGACAAGTTCAGTGGGGAGACGAAAGACACCCCCATATACCTTGAGTAGCTTCCCTTTCTGTGGTTCCTTAGTTTTCAAAAGTTCCAAGTTGTTGACATCATATGTGGTTCTAGAATCAGACAACCCATTTGATATTTAAATCTAGACTGCTCACTGATGCACTGAAGACTTTCATGTGGAGACATTTTCTTCGATGCGTTTACGGTAATTCGGTTTCACTCTAATTCAACCTTAAATCTTAGAAGTAATCGCTTGTAAAGGATAACCTTAAATCTTAGAAGTAAACGCTTGTAAAGGATTAAAGACTAGGATAATTGTTGAACTGGTATAGACTTTAGATTCTAACTCTGAATTTGAGTTTGGTGCTGTTGGATTCTATGAGCTGAGCATATGTGCATTTAC

Coding sequence (CDS)

ATGAATGTTCTGAAGAAGGTACGACGACTGAGTGTCTCACCGTCTGCTTGCTTCGAGCTCACAGAGAATACTCGTTTAATTTTAAACGTAATTTTTTGTTGCATTTGTTCTGCCAACTTTCATCATCTGCAGATGCAGTCACAAAGGGAACCTCCGACAGAGCTTCCAACAATGGAGCCACAAAATGGAGAAAATTTGCCACTTTCAGGCAAACCCTACCATGCTTTTATTCTTTCTAAATCGCACGTCGCTCCCATATGTAATTTGGTTTTACCAGCTAAATTCCATTCTATTTTACCTGCTATTGTGATCCCGACGGTTCTTTTCTGTCGAGGCAAGAAATGGAAGATAGATTATTATGGGAACCGACGCGGTAAGGCACTTGATACAAAACAGTGGAGGAAGTTTGTCAATGATAATCGTCTCAAGTCTGGAGATGCTTGTGTATTTGAGCTCATGGAATGCAGCAGCAGCATACTTAAATTTAGAGTTCAAATTCTCAGAGGTGACATCCCTTTACAGCTTCACGACAAGTTCAGTGGGGAGACGAAAGACACCCCCATATACCTTGAGTAG

Protein sequence

MNVLKKVRRLSVSPSACFELTENTRLILNVIFCCICSANFHHLQMQSQREPPTELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVIPTVLFCRGKKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRVQILRGDIPLQLHDKFSGETKDTPIYLE
Homology
[Close]
BLAST of ClCG05G002510 vs. Swiss-Prot
Match: Y4869_ORYSJ (B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica GN=Os04g0386900 PE=2 SV=3)

HSP 1 Score: 99.0 bits (245), Expect = 6.0e-20
Identity = 58/156 (37.18%), Postives = 81/156 (51.92%), Query Frame = 1 

Query: 42  HLQMQSQREPPTELPTMEPQNGEN---LPLSGKPYHAFILSKSHVAPICNLVLPAKFHSI 101
           H+   ++  PP   P  EP+       LPL GKPY   I+ KSHV P   +V+P  F  +
Sbjct: 59  HIAAGTEAAPPRP-PEPEPEKVARHGVLPLLGKPYFTCIMCKSHVQPPFQVVVPRSFAPL 118

Query: 102 LPAIVIPTVLFCRGKKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELM---EC 161
           LP+   P  L  RG+ W + + G R  + L+   WR F  DN L+ GD CVFEL+     
Sbjct: 119 LPSRTTPATLSWRGRSWGMRFTGGRLIQRLEA-GWRGFAVDNDLRLGDGCVFELLVGGGG 178

Query: 162 SSSILKFRVQILRGDIPLQLHDKFSGETKDTPIYLE 192
               ++FRVQ+LR +IP ++  +  G T  TPI ++
Sbjct: 179 EQERVEFRVQVLRAEIPARIRGRAGGYTSATPIVID 212

[Close]
BLAST of ClCG05G002510 vs. Swiss-Prot
Match: Y6112_ORYSJ (B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica GN=Os06g0112300 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.1e-13
Identity = 48/125 (38.40%), Postives = 67/125 (53.60%), Query Frame = 1 

Query: 69  SGKPYHAFILSKSHVAPICNLVLPAKFHSIL--PAIVIPTVLFCRGKKWKIDYYGNRRGK 128
           +G P+   +++KSH+ P   + +P +F   L  P      VL   GK W   Y G+ + K
Sbjct: 51  AGNPFFTALIAKSHLHPKFQMWIPPRFQHRLAEPEARTAAVLHSGGKSWATSYCGHLKMK 110

Query: 129 ALDTKQWRKFVNDNRLKSGDACVFELMEC-SSSILKFRVQILRGDIPLQLHDKFSGETKD 188
            LD   W +F  DNRL  GDACVFEL+   ++  L+F+VQILRG +P ++     G T D
Sbjct: 111 KLDAG-WSEFAVDNRLLVGDACVFELVAMGAAGGLEFQVQILRGGLPAEVVTS-KGLTSD 170

Query: 189 TPIYL 191
            PI +
Sbjct: 171 QPILI 173

[Close]
BLAST of ClCG05G002510 vs. TrEMBL
Match: A0A0A0L3V3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126890 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 4.4e-70
Identity = 130/147 (88.44%), Postives = 139/147 (94.56%), Query Frame = 1 

Query: 45  MQSQREPPTELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVI 104
           MQS R+PPTELPTMEPQNGE +PLSGKPYHAFILSKSHVAPI NLVLPAKFHSILPAIVI
Sbjct: 1   MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60

Query: 105 PTVLFCRGKKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRV 164
           P VL CRGKKWKIDY+GNRRGKALD+KQWRKFVNDN LKSGDA VFEL+ECSSSILKFRV
Sbjct: 61  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRV 120

Query: 165 QILRGDIPLQLHDKFSGETKDTPIYLE 192
           QIL GDIPL+LHDKFSGETK+TPI+L+
Sbjct: 121 QILSGDIPLELHDKFSGETKETPIHLD 147

[Close]
BLAST of ClCG05G002510 vs. TrEMBL
Match: M5X861_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025386mg PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-31
Identity = 72/139 (51.80%), Postives = 92/139 (66.19%), Query Frame = 1 

Query: 53  TELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVIPTVLFCRG 112
           T  P +E +  E  PLSGKP+   +L+K+ + P+C LV+P KF + LP+  IPTVL  RG
Sbjct: 13  TSNPVIELEGDEFWPLSGKPFFDVVLTKTSIKPMCQLVVPGKFSATLPSCSIPTVLTFRG 72

Query: 113 KKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRVQILRGDIP 172
           K W++ Y+G+   K LD   W+ F  DN LK GDACVFE +ECSS+ L FRVQILRGDIP
Sbjct: 73  KNWEMTYHGSSNYKRLDN--WKAFAIDNNLKVGDACVFEQLECSSTRLVFRVQILRGDIP 132

Query: 173 LQLHDKFSGETKDTPIYLE 192
            +  DK  G+  D PI LE
Sbjct: 133 SEFLDKLDGDNVDAPIVLE 149

[Close]
BLAST of ClCG05G002510 vs. TrEMBL
Match: M5X1G4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012926mg PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.8e-29
Identity = 70/139 (50.36%), Postives = 90/139 (64.75%), Query Frame = 1 

Query: 53  TELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVIPTVLFCRG 112
           T  P +E +  E  PLSGKP+   +L+K+++  +  LV+P KF + LP+  IPTVL  RG
Sbjct: 12  TSNPVIELEGDEFWPLSGKPFFDVVLTKTNIKRLYQLVVPGKFSATLPSCSIPTVLIFRG 71

Query: 113 KKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRVQILRGDIP 172
           K W++ Y+G+   K LD   WR F  DN LK GDACVFE +ECSS+ L FRVQILRGDI 
Sbjct: 72  KNWEMIYHGSSSHKRLDN--WRAFAVDNNLKVGDACVFEQLECSSTRLVFRVQILRGDIS 131

Query: 173 LQLHDKFSGETKDTPIYLE 192
            +  DK  G+  D PI LE
Sbjct: 132 SEFLDKLGGDNVDAPIVLE 148

[Close]
BLAST of ClCG05G002510 vs. TrEMBL
Match: F6I5F3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0024g00930 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.8e-29
Identity = 73/155 (47.10%), Postives = 96/155 (61.94%), Query Frame = 1 

Query: 37  SANFHHLQMQSQREPPTELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFH 96
           S    + +M+      +E P  + Q  E  PL GKPY   +L KSH+     +VLP K H
Sbjct: 40  STKAENSKMEESGGQTSEEPATKFQADEIHPLLGKPYFHVVLVKSHLN---QMVLPTKMH 99

Query: 97  SILPAIVIPTVLFCRGKKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECS 156
             +P+ VIP VL  + K+W++ + G+ R        WR FVNDN LK+GDACVFELMEC+
Sbjct: 100 PSVPSAVIPAVLVHQDKRWEMTFNGDHRTHKRFDIGWRTFVNDNNLKAGDACVFELMECN 159

Query: 157 SSILKFRVQILRGDIPLQLHDKFSGETKDTPIYLE 192
           +S +KFRVQILRGDIP  L D+ +GET DT I +E
Sbjct: 160 TSNIKFRVQILRGDIPSMLLDRANGETSDTAIVIE 191

[Close]
BLAST of ClCG05G002510 vs. TrEMBL
Match: A5AIM5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020729 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.8e-29
Identity = 73/155 (47.10%), Postives = 96/155 (61.94%), Query Frame = 1 

Query: 37  SANFHHLQMQSQREPPTELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFH 96
           S    + +M+      +E P  + Q  E  PL GKPY   +L KSH+     +VLP K H
Sbjct: 9   STKAENSKMEESGGQTSEEPATKFQADEIHPLLGKPYFHVVLVKSHLN---QMVLPTKMH 68

Query: 97  SILPAIVIPTVLFCRGKKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECS 156
             +P+ VIP VL  + K+W++ + G+ R        WR FVNDN LK+GDACVFELMEC+
Sbjct: 69  PSVPSAVIPAVLVHQXKRWEMTFNGDHRTHKRFDIGWRTFVNDNNLKAGDACVFELMECN 128

Query: 157 SSILKFRVQILRGDIPLQLHDKFSGETKDTPIYLE 192
           +S +KFRVQILRGDIP  L D+ +GET DT I +E
Sbjct: 129 TSNIKFRVQILRGDIPSMLLDRANGETSDTAIVIE 160

[Close]
BLAST of ClCG05G002510 vs. TAIR10
Match: AT4G33280.1 (AT4G33280.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.8e-06
Identity = 33/96 (34.38%), Postives = 44/96 (45.83%), Query Frame = 1 

Query: 78  LSKSHVAPICNLVLPAKFHSILPAIVIPTVLFCRGK-KW--KIDYYGNRRGKALDTKQWR 137
           + +SHV   C L +P K+      I    V+    + KW  K + +G R    + T  W+
Sbjct: 227 MKRSHVVSKCFLTIPYKWCVKNMLITRQEVVMQVDQTKWEMKFNIFGARGSGGISTG-WK 286

Query: 138 KFVNDNRLKSGDACVFELMECSSSILKFRVQILRGD 171
           KFV DN L+ GD CVFE     +  L   V I RG+
Sbjct: 287 KFVQDNNLREGDVCVFEPANSETKPLHLNVYIFRGE 321

[Close]
BLAST of ClCG05G002510 vs. NCBI nr
Match: gi|778677528|ref|XP_011650806.1| (PREDICTED: B3 domain-containing protein Os04g0386900-like [Cucumis sativus])

HSP 1 Score: 272.3 bits (695), Expect = 6.3e-70
Identity = 130/147 (88.44%), Postives = 139/147 (94.56%), Query Frame = 1 

Query: 45  MQSQREPPTELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVI 104
           MQS R+PPTELPTMEPQNGE +PLSGKPYHAFILSKSHVAPI NLVLPAKFHSILPAIVI
Sbjct: 1   MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60

Query: 105 PTVLFCRGKKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRV 164
           P VL CRGKKWKIDY+GNRRGKALD+KQWRKFVNDN LKSGDA VFEL+ECSSSILKFRV
Sbjct: 61  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRV 120

Query: 165 QILRGDIPLQLHDKFSGETKDTPIYLE 192
           QIL GDIPL+LHDKFSGETK+TPI+L+
Sbjct: 121 QILSGDIPLELHDKFSGETKETPIHLD 147

[Close]
BLAST of ClCG05G002510 vs. NCBI nr
Match: gi|596056091|ref|XP_007220940.1| (hypothetical protein PRUPE_ppa025386mg, partial [Prunus persica])

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-31
Identity = 72/139 (51.80%), Postives = 92/139 (66.19%), Query Frame = 1 

Query: 53  TELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVIPTVLFCRG 112
           T  P +E +  E  PLSGKP+   +L+K+ + P+C LV+P KF + LP+  IPTVL  RG
Sbjct: 13  TSNPVIELEGDEFWPLSGKPFFDVVLTKTSIKPMCQLVVPGKFSATLPSCSIPTVLTFRG 72

Query: 113 KKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRVQILRGDIP 172
           K W++ Y+G+   K LD   W+ F  DN LK GDACVFE +ECSS+ L FRVQILRGDIP
Sbjct: 73  KNWEMTYHGSSNYKRLDN--WKAFAIDNNLKVGDACVFEQLECSSTRLVFRVQILRGDIP 132

Query: 173 LQLHDKFSGETKDTPIYLE 192
            +  DK  G+  D PI LE
Sbjct: 133 SEFLDKLDGDNVDAPIVLE 149

[Close]
BLAST of ClCG05G002510 vs. NCBI nr
Match: gi|694428103|ref|XP_009341640.1| (PREDICTED: B3 domain-containing protein Os04g0386900-like isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 139.8 bits (351), Expect = 4.9e-30
Identity = 72/142 (50.70%), Postives = 92/142 (64.79%), Query Frame = 1 

Query: 50  EPPTELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVIPTVLF 109
           + PT    +E Q  E  PLS KP+   +++K++V P   +V+PAKF   LP+  IPTVL 
Sbjct: 3   DQPTSNSMIELQGDEFWPLSEKPFFEVVITKANVKPSYQMVIPAKFQQTLPSCSIPTVLT 62

Query: 110 CRGKKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRVQILRG 169
             GK W++ Y      +  DT  WR+FVNDN LK GDACVFEL+ECSS+ L FRVQILRG
Sbjct: 63  FGGKNWEMTYTHGSGQRKFDTN-WREFVNDNNLKVGDACVFELLECSSTKLVFRVQILRG 122

Query: 170 DIPLQLHDKFSGETKDTPIYLE 192
           DIP +L  K  GET D PI ++
Sbjct: 123 DIPSELLGKLKGETVDAPIIID 143

[Close]
BLAST of ClCG05G002510 vs. NCBI nr
Match: gi|657949831|ref|XP_008345126.1| (PREDICTED: B3 domain-containing protein Os06g0112300-like [Malus domestica])

HSP 1 Score: 139.0 bits (349), Expect = 8.4e-30
Identity = 72/142 (50.70%), Postives = 92/142 (64.79%), Query Frame = 1 

Query: 50  EPPTELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVIPTVLF 109
           + PT  P +E Q  E  PLS KP+   +++K++V P   +V+PAKF   LP+  I TVL 
Sbjct: 3   DQPTSNPPIELQGDEFWPLSEKPFFEVVIAKANVKPSYQMVIPAKFQQTLPSCSIHTVLM 62

Query: 110 CRGKKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRVQILRG 169
             GK W++ Y      +  DT  WR+FVNDN LK GDACVFEL+ECSS+ L FRVQILRG
Sbjct: 63  FGGKNWEMTYTCGSGQRKFDTN-WREFVNDNNLKVGDACVFELLECSSTKLIFRVQILRG 122

Query: 170 DIPLQLHDKFSGETKDTPIYLE 192
           DIP +L  K  GET D PI ++
Sbjct: 123 DIPSELLRKLKGETVDAPIIID 143

[Close]
BLAST of ClCG05G002510 vs. NCBI nr
Match: gi|645252559|ref|XP_008232177.1| (PREDICTED: B3 domain-containing protein Os04g0386900-like [Prunus mume])

HSP 1 Score: 137.5 bits (345), Expect = 2.4e-29
Identity = 70/139 (50.36%), Postives = 92/139 (66.19%), Query Frame = 1 

Query: 53  TELPTMEPQNGENLPLSGKPYHAFILSKSHVAPICNLVLPAKFHSILPAIVIPTVLFCRG 112
           T  P +E +  E  PLSGKP+   +L+K+++  +  LV+P KF + LP+  +PTVL  RG
Sbjct: 6   TSNPVIELEGDEFWPLSGKPFFDVVLTKTNINHLYQLVVPGKFSATLPSCSMPTVLTFRG 65

Query: 113 KKWKIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRVQILRGDIP 172
           K W++ Y+G+   K LD   W+ FV DN LK GDACVFE +ECSS+ L FRVQILRGDIP
Sbjct: 66  KNWEMIYHGSSSHKRLDN--WKAFVIDNNLKVGDACVFEQLECSSTRLVFRVQILRGDIP 125

Query: 173 LQLHDKFSGETKDTPIYLE 192
            +  DK  G+  D PI LE
Sbjct: 126 SEFLDKLDGDNVDAPIVLE 142

The following BLAST results are available for this feature:
BLAST of ClCG05G002510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y4869_ORYSJ6.0e-2037.18B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica GN=Os0... [more]
Y6112_ORYSJ1.1e-1338.40B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica GN=Os0... [more]
BLAST of ClCG05G002510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3V3_CUCSA4.4e-7088.44Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126890 PE=4 SV=1[more]
M5X861_PRUPE1.1e-3151.80Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025386mg PE=4 S... [more]
M5X1G4_PRUPE3.8e-2950.36Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012926mg PE=4 SV=1[more]
F6I5F3_VITVI3.8e-2947.10Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0024g00930 PE=4 SV=... [more]
A5AIM5_VITVI3.8e-2947.10Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020729 PE=4 SV=1[more]
BLAST of ClCG05G002510 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33280.11.8e-0634.38 AP2/B3-like transcriptional factor family protein[more]
BLAST of ClCG05G002510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778677528|ref|XP_011650806.1|6.3e-7088.44PREDICTED: B3 domain-containing protein Os04g0386900-like [Cucumis sativus][more]
gi|596056091|ref|XP_007220940.1|1.5e-3151.80hypothetical protein PRUPE_ppa025386mg, partial [Prunus persica][more]
gi|694428103|ref|XP_009341640.1|4.9e-3050.70PREDICTED: B3 domain-containing protein Os04g0386900-like isoform X2 [Pyrus x br... [more]
gi|657949831|ref|XP_008345126.1|8.4e-3050.70PREDICTED: B3 domain-containing protein Os06g0112300-like [Malus domestica][more]
gi|645252559|ref|XP_008232177.1|2.4e-2950.36PREDICTED: B3 domain-containing protein Os04g0386900-like [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003340B3_DNA-bd
IPR015300DNA-bd_pseudobarrel_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G002510.1ClCG05G002510.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 78..167
score: 5.5
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 78..170
score: 0.
IPR003340B3 DNA binding domainPROFILEPS50863B3coord: 74..170
score: 11
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 71..168
score: 2.0
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 70..168
score: 2.49
NoneNo IPR availablePANTHERPTHR31391FAMILY NOT NAMEDcoord: 44..188
score: 1.0
NoneNo IPR availablePANTHERPTHR31391:SF15SUBFAMILY NOT NAMEDcoord: 44..188
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG05G002510Csa3G126890Cucumber (Chinese Long) v2cuwcgB222
ClCG05G002510MELO3C006216Melon (DHL92) v3.5.1mewcgB427
ClCG05G002510Cla021334Watermelon (97103) v1wcgwmB286
ClCG05G002510Cla97C05G083010Watermelon (97103) v2wcgwmbB229
ClCG05G002510Bhi01G000055Wax gourdwcgwgoB428
ClCG05G002510CSPI03G09800Wild cucumber (PI 183967)cpiwcgB226
ClCG05G002510Cucsa.257390Cucumber (Gy14) v1cgywcgB451
ClCG05G002510CmaCh06G011520Cucurbita maxima (Rimu)cmawcgB737
ClCG05G002510CmoCh06G011810Cucurbita moschata (Rifu)cmowcgB743
ClCG05G002510Lsi05G019330Bottle gourd (USVL1VR-Ls)lsiwcgB335
ClCG05G002510Cp4.1LG08g02060Cucurbita pepo (Zucchini)cpewcgB787
ClCG05G002510CsGy3G009890Cucumber (Gy14) v2cgybwcgB203
ClCG05G002510MELO3C006216.2Melon (DHL92) v3.6.1medwcgB416
ClCG05G002510Carg06365Silver-seed gourdcarwcgB0935
ClCG05G002510CsaV3_3G009950Cucumber (Chinese Long) v3cucwcgB225
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G002510Melon (DHL92) v3.6.1medwcgB117
ClCG05G002510Silver-seed gourdcarwcgB0220
ClCG05G002510Silver-seed gourdcarwcgB0602
ClCG05G002510Silver-seed gourdcarwcgB1044
ClCG05G002510Cucumber (Chinese Long) v3cucwcgB490
ClCG05G002510Watermelon (97103) v2wcgwmbB234
ClCG05G002510Wax gourdwcgwgoB416
ClCG05G002510Watermelon (Charleston Gray)wcgwcgB156
ClCG05G002510Cucumber (Gy14) v1cgywcgB617
ClCG05G002510Cucurbita maxima (Rimu)cmawcgB233
ClCG05G002510Cucurbita maxima (Rimu)cmawcgB319
ClCG05G002510Cucurbita maxima (Rimu)cmawcgB799
ClCG05G002510Cucurbita moschata (Rifu)cmowcgB219
ClCG05G002510Cucurbita moschata (Rifu)cmowcgB315
ClCG05G002510Cucurbita moschata (Rifu)cmowcgB794
ClCG05G002510Wild cucumber (PI 183967)cpiwcgB494
ClCG05G002510Cucumber (Chinese Long) v2cuwcgB470
ClCG05G002510Melon (DHL92) v3.5.1mewcgB122
ClCG05G002510Watermelon (97103) v1wcgwmB309
ClCG05G002510Cucurbita pepo (Zucchini)cpewcgB138
ClCG05G002510Cucurbita pepo (Zucchini)cpewcgB292
ClCG05G002510Cucurbita pepo (Zucchini)cpewcgB559
ClCG05G002510Bottle gourd (USVL1VR-Ls)lsiwcgB022
ClCG05G002510Cucumber (Gy14) v2cgybwcgB431