MELO3C006160 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006160
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionHistone deacetylase complex subunit SAP18
Locationchr6 : 1402589 .. 1405043 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCAGAAGTTGAAACTTGAAGAATACTTCGAGAGAAATGGCGGGAGAAGCTGAAGCACCAAGGAGGGCTTATGGCGCTCCTCCAAGAGCAACTCATGCTCCTCCTCGTCCTCGTTTGGAGCCTGTTGATCGAGAAAAGGTTTCTCTCTTTCTCTTCTCTATTTTTAGGGTTTCTAATTCTATCCCTTCTAGCGTTGTCTCTGATTTTCAATTTTGGTGTTCATTAGCTTGTTCTTGAATCCACATTCAGATCAATCGTTTTCTTATTTATTTGTTCTAGAATTTCGTTGGAATCTCTTTATTTTGGTGCTTGTTACTTGAATCTCCGATTATTGCATTTTCGCTGCTCGTAGTGTTCGGAGCTGGCTGTGTAAATATAGATAGCAACTTTCATTCTCTATGTTGAGTAATTTCCTTTCTATTGCTGCAGACTTGTCCTTTGCTGCTTCGCGTTTTCACGAAGGTACGTCGTTTTTTTATGCTGGGTTTTGTTTTTGTGGATTTTGTTCCATATCTATTCAAAGTACCCAAAACAAGTGTGTTTCATCGACCTGGGAACCGTAGTTTAATCCAACCGATGTATTAGGGATGAAATGAAGTGCGTTGGGTGTCGAATTTGTGTGAAATGTTCGAATTTATGCCATTGTGTTGATAGATGGGGTTTAGGAATCTGATTAGAGGATAACTTAAAGCAAATTTCCGTGGTTTCGGGTGGCTACATTTAGGTTATGAGGAGTCTGGTTCTAAATAATGCTACACTTGGATAAGGAAGGGTAATATTGCTGTTTATTTTTTTTCTTTTCATATTTTTGGTAGATTGGGAGTCATCATTTCAATGAAGACTTCGCTGTGAGGGGCAAGGAGCCGAGGGATGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGCGAACTAACTGATCTGGTTGTATTTCTTATTCCTTTTTAACCTCTTCTCCCTCCACGCTTTGCATGACATAAATGCGACTGATCTGTATCTTTTTTAATGTATATCCATGATGCATTCGTAGAAACTATTTTCCATTTCATTGCTCCTTGATCTCATGTGTCTACTTTTCTTTCCATTTTGGGTGAGGGAGTTTACAGGTCAAAGAGGTAGCTCCAGAAGCCAGGAGGAGAAATGCTAAACTTTCCTTTGCTTTGGTTTATCCCGATAGACATGGTCGGTTTGTATTGAGAGAGGTGTATATTTTCTCTTCCCTTCTCCCACATATGTCATGCATATACACATATAATACAATGTTTTTAGGATGAACTAGGGAAACATTCTTGACACTTTTCTTTTTTACTTAGTTAAGTTTATCAATTTGAGCACCCAAGTTGAATAAGTGGTAAAATGAATTAATGCTGAACTGAAATCTTTTGTTCTAACCATACTGTCATCATGTCCTGCTGTAACTTGCAGTTTCTTTAGCCGCAAAGATTTTTCTGTGTAAAGGGCTTAAGTACGTGATATACTCGAATCCGTAATAAATTTCCCAGAATTCATTGACCTCATCTGTAATTTACGTTTACAAATATATGAAGAAAGCGAATTTCGAGTTCTATAGTAGATATGACTAGTTACCATTTTGGAGGTTGATGGTTTGTTCTTCATCCATCTAATTGTTGTGGTGTGGATCCCTCATCAAACACATGGATTACTATTCTCATTCACAACTAATTTTGCGATAGAATCTTATATTTATCTAATTATTTATCATATCTTAGGAAGCCTAAATGAATATTTGGTCTAAATCATTGAGGGGTATGTGAGGATCTCATCCCATGTGGGACAAACGAAGAAATCTCATCATCTTTACTTGATACATTTTCTCATTACCCGTTGGTTTGAGGATAGAAATACATGCTTATGTAATGTATTGAACTAAAAAAAACTAGCTTGAGTCATACAGATTCTGTTTCTTCATTTGAAGGTAGGGAAGACATTCTCGTTTGGAAATAGACGATTAGACGATAGCTTGGCTTTGGGAGAACTTGGTTTTCAGGTAAAACAAAGCATGGCTTTCTTTTTTGCCTTATCAATCCTGTATTCCTTATCAAACTTGGTGCAATTCTTCCCACGCAGATTGGAGATTACTTGGACGTGGCAATCATATAGGGTATGTGGTGCGTTTATATACTAATAATTTGCCTATGGTGAAGAACAAAAAGAATGAGGATATTAACTTCAATCTTGTAATGTATATTCCATTTAAGAATTGGTCGAAAATCCTTTACCTTGTATGTTTTCTTCCCCTGTGCCATATGAGGTAGATCGTGATAGTCATTGTCACGTTCCTTTGAGTTACCTTCTTGATGTATTGCATCAGATGAACCGGGCCATATAATAGAGTTTTCGTTGGGACGATAATGGTGGAACTATTTTAGGCCCTATGGTTTCATTAACATGAGTTTTTCTTTACAAAAATCAAAGTCTTTGTTGCATGCGTT

mRNA sequence

GGCAGAAGTTGAAACTTGAAGAATACTTCGAGAGAAATGGCGGGAGAAGCTGAAGCACCAAGGAGGGCTTATGGCGCTCCTCCAAGAGCAACTCATGCTCCTCCTCGTCCTCGTTTGGAGCCTGTTGATCGAGAAAAGACTTGTCCTTTGCTGCTTCGCGTTTTCACGAAGATTGGGAGTCATCATTTCAATGAAGACTTCGCTGTGAGGGGCAAGGAGCCGAGGGATGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGCGAACTAACTGATCTGGTCAAAGAGGTAGCTCCAGAAGCCAGGAGGAGAAATGCTAAACTTTCCTTTGCTTTGGTTTATCCCGATAGACATGGTCGGTTTGTATTGAGAGAGGTAGGGAAGACATTCTCGTTTGGAAATAGACGATTAGACGATAGCTTGGCTTTGGGAGAACTTGGTTTTCAGATTGGAGATTACTTGGACGTGGCAATCATATAGGGTATGTGGTGCGTTTATATACTAATAATTTGCCTATGGTGAAGAACAAAAAGAATGAGGATATTAACTTCAATCTTGTAATGTATATTCCATTTAAGAATTGGTCGAAAATCCTTTACCTTGTATGTTTTCTTCCCCTGTGCCATATGAGGTAGATCGTGATAGTCATTGTCACGTTCCTTTGAGTTACCTTCTTGATGTATTGCATCAGATGAACCGGGCCATATAATAGAGTTTTCGTTGGGACGATAATGGTGGAACTATTTTAGGCCCTATGGTTTCATTAACATGAGTTTTTCTTTACAAAAATCAAAGTCTTTGTTGCATGCGTT

Coding sequence (CDS)

ATGGCGGGAGAAGCTGAAGCACCAAGGAGGGCTTATGGCGCTCCTCCAAGAGCAACTCATGCTCCTCCTCGTCCTCGTTTGGAGCCTGTTGATCGAGAAAAGACTTGTCCTTTGCTGCTTCGCGTTTTCACGAAGATTGGGAGTCATCATTTCAATGAAGACTTCGCTGTGAGGGGCAAGGAGCCGAGGGATGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGCGAACTAACTGATCTGGTCAAAGAGGTAGCTCCAGAAGCCAGGAGGAGAAATGCTAAACTTTCCTTTGCTTTGGTTTATCCCGATAGACATGGTCGGTTTGTATTGAGAGAGGTAGGGAAGACATTCTCGTTTGGAAATAGACGATTAGACGATAGCTTGGCTTTGGGAGAACTTGGTTTTCAGATTGGAGATTACTTGGACGTGGCAATCATATAG

Protein sequence

MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFSFGNRRLDDSLALGELGFQIGDYLDVAII*
Homology
[Close]
BLAST of MELO3C006160 vs. Swiss-Prot
Match: SAP18_ARATH (Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana GN=At2g45640 PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 4.8e-49
Identity = 102/150 (68.00%), Postives = 116/150 (77.33%), Query Frame = 1 

Query: 5   AEAPRRAYGA-----PPRATHA-PPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVR 64
           AEA RR  G      PPR  +  PPRP+ EPVDREKTCPLLLRVFTK G HH +ED+AVR
Sbjct: 2   AEAARRQGGGRPLPPPPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYAVR 61

Query: 65  GKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKT 124
           GKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFA VYP+  G + +REVG+T
Sbjct: 62  GKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGYNVREVGET 121

Query: 125 FSFGNRRL-DDSLALGELGFQIGDYLDVAI 148
            ++ NR+  DDS  L EL F+IGDYLDVAI
Sbjct: 122 MAYPNRKQPDDSKTLSELPFEIGDYLDVAI 151

[Close]
BLAST of MELO3C006160 vs. Swiss-Prot
Match: SAP18_BOVIN (Histone deacetylase complex subunit SAP18 OS=Bos taurus GN=SAP18 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-28
Identity = 65/121 (53.72%), Postives = 80/121 (66.12%), Query Frame = 1 

Query: 28  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 87
           +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 88  PEARRRNAKLSFALVYPD-RHGRFVLREVGKTFSFGNRRLDDSLALGELGFQIGDYLDVA 147
           PEAR++    +FA+V+ D +   + ++E+G T S G +  DDS+ L    FQIGDYLD+A
Sbjct: 78  PEARKKGTHFNFAIVFTDLKRPGYRVKEIGSTMS-GRKGTDDSMTLQSQKFQIGDYLDIA 137

[Close]
BLAST of MELO3C006160 vs. Swiss-Prot
Match: SAP18_HUMAN (Histone deacetylase complex subunit SAP18 OS=Homo sapiens GN=SAP18 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-28
Identity = 65/121 (53.72%), Postives = 80/121 (66.12%), Query Frame = 1 

Query: 28  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 87
           +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 88  PEARRRNAKLSFALVYPD-RHGRFVLREVGKTFSFGNRRLDDSLALGELGFQIGDYLDVA 147
           PEAR++    +FA+V+ D +   + ++E+G T S G +  DDS+ L    FQIGDYLD+A
Sbjct: 78  PEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMS-GRKGTDDSMTLQSQKFQIGDYLDIA 137

[Close]
BLAST of MELO3C006160 vs. Swiss-Prot
Match: SAP18_PONAB (Histone deacetylase complex subunit SAP18 OS=Pongo abelii GN=SAP18 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-28
Identity = 65/121 (53.72%), Postives = 80/121 (66.12%), Query Frame = 1 

Query: 28  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 87
           +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 88  PEARRRNAKLSFALVYPD-RHGRFVLREVGKTFSFGNRRLDDSLALGELGFQIGDYLDVA 147
           PEAR++    +FA+V+ D +   + ++E+G T S G +  DDS+ L    FQIGDYLD+A
Sbjct: 78  PEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMS-GRKGTDDSMTLQSQKFQIGDYLDIA 137

[Close]
BLAST of MELO3C006160 vs. Swiss-Prot
Match: SAP18_MOUSE (Histone deacetylase complex subunit SAP18 OS=Mus musculus GN=Sap18 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-28
Identity = 65/121 (53.72%), Postives = 80/121 (66.12%), Query Frame = 1 

Query: 28  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 87
           +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 88  PEARRRNAKLSFALVYPD-RHGRFVLREVGKTFSFGNRRLDDSLALGELGFQIGDYLDVA 147
           PEAR++    +FA+V+ D +   + ++E+G T S G +  DDS+ L    FQIGDYLD+A
Sbjct: 78  PEARKKGTHFNFAIVFMDLKRPGYRVKEIGSTMS-GRKGTDDSMTLQSQKFQIGDYLDIA 137

[Close]
BLAST of MELO3C006160 vs. TrEMBL
Match: A0A0A0L6C9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124880 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 2.6e-78
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 1 

Query: 1   MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60
           MAGEAEAPRRAYG PPRATHAPPRPRLEPVDREKTCPLLLRVFTK GSHHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGGPPRATHAPPRPRLEPVDREKTCPLLLRVFTKTGSHHFNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS 120

Query: 121 FGNRRLDDSLALGELGFQIGDYLDVAII 149
           FGNRRLDDSLALGELGFQIGDYLDVAII
Sbjct: 121 FGNRRLDDSLALGELGFQIGDYLDVAII 148

[Close]
BLAST of MELO3C006160 vs. TrEMBL
Match: M5X2P5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012935mg PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 1.9e-60
Identity = 115/148 (77.70%), Postives = 127/148 (85.81%), Query Frame = 1 

Query: 1   MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60
           MAG A+AP+RA     R   +PPRPR  PVDREKTCPLLLRVFTK+GSHH NEDFAVRGK
Sbjct: 1   MAGVAQAPKRALAPQGRGLRSPPRPRFAPVDREKTCPLLLRVFTKVGSHHTNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS 120
           EP+DEVQIYTWKDA LRELTDLVKEVAP ARRRNAKLSFA+VYPDRHG FV++EVG+T S
Sbjct: 61  EPKDEVQIYTWKDANLRELTDLVKEVAPAARRRNAKLSFAIVYPDRHGHFVVKEVGRTLS 120

Query: 121 FGNRRLDDSLALGELGFQIGDYLDVAII 149
           +GN RLDD+  L ELGF IGDYLDVAI+
Sbjct: 121 YGNGRLDDAKVLAELGFAIGDYLDVAIM 148

[Close]
BLAST of MELO3C006160 vs. TrEMBL
Match: W9S5P2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020767 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.0e-58
Identity = 116/148 (78.38%), Postives = 126/148 (85.14%), Query Frame = 1 

Query: 1   MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60
           MAG +E P+R    PPR       PR EPVDREKTCPLLLRVFTKIG HH NEDFAVRGK
Sbjct: 1   MAGLSEGPKRPPPPPPRG------PRFEPVDREKTCPLLLRVFTKIGGHHANEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS 120
           EP+DEVQIYTWKDATLRE+TDLVKEVA  ARRRNAKLSFA VYPD+HGRF++REVGKTFS
Sbjct: 61  EPKDEVQIYTWKDATLREITDLVKEVASAARRRNAKLSFAFVYPDKHGRFLVREVGKTFS 120

Query: 121 FGNRRLDDSLALGELGFQIGDYLDVAII 149
           +GN RLDD+ AL ELGFQIGDYLDVAI+
Sbjct: 121 YGNGRLDDNKALAELGFQIGDYLDVAIL 142

[Close]
BLAST of MELO3C006160 vs. TrEMBL
Match: A0A0D2SA62_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G093600 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.0e-58
Identity = 118/153 (77.12%), Postives = 128/153 (83.66%), Query Frame = 1 

Query: 1   MAGEAEAPRRAYGAP----PRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFA 60
           MAG AE  +R  G P     R    PPRPR EPVDREKTCPLLLRVFTKIG HH  EDFA
Sbjct: 1   MAGAAEPQKRQSGRPFPPSARGPPPPPRPRFEPVDREKTCPLLLRVFTKIGGHHSKEDFA 60

Query: 61  VRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVG 120
           VRGKEP+DEVQIYTWKDATLRELTDLVKEVAP ARRR+A+LSFA VYPD++GRFV+REVG
Sbjct: 61  VRGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRDARLSFAFVYPDKNGRFVVREVG 120

Query: 121 KTFSFGN-RRLDDSLALGELGFQIGDYLDVAII 149
           KTFS+GN RRLDDS  LGEL F+IGDYLDVAI+
Sbjct: 121 KTFSYGNVRRLDDSKTLGELSFEIGDYLDVAIM 153

[Close]
BLAST of MELO3C006160 vs. TrEMBL
Match: A0A0B0NV41_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_21512 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.0e-58
Identity = 118/153 (77.12%), Postives = 128/153 (83.66%), Query Frame = 1 

Query: 1   MAGEAEAPRRAYGAP----PRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFA 60
           MAG AE  +R  G P     R    PPRPR EPVDREKTCPLLLRVFTKIG HH  EDFA
Sbjct: 30  MAGAAEPQKRQSGRPFPPSARGPPPPPRPRFEPVDREKTCPLLLRVFTKIGGHHSKEDFA 89

Query: 61  VRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVG 120
           VRGKEP+DEVQIYTWKDATLRELTDLVKEVAP ARRR+A+LSFA VYPD++GRFV+REVG
Sbjct: 90  VRGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRDARLSFAFVYPDKNGRFVVREVG 149

Query: 121 KTFSFGN-RRLDDSLALGELGFQIGDYLDVAII 149
           KTFS+GN RRLDDS  LGEL F+IGDYLDVAI+
Sbjct: 150 KTFSYGNVRRLDDSKTLGELSFEIGDYLDVAIM 182

[Close]
BLAST of MELO3C006160 vs. TAIR10
Match: AT2G45640.1 (AT2G45640.1 SIN3 associated polypeptide P18)

HSP 1 Score: 195.3 bits (495), Expect = 2.7e-50
Identity = 102/150 (68.00%), Postives = 116/150 (77.33%), Query Frame = 1 

Query: 5   AEAPRRAYGA-----PPRATHA-PPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVR 64
           AEA RR  G      PPR  +  PPRP+ EPVDREKTCPLLLRVFTK G HH +ED+AVR
Sbjct: 2   AEAARRQGGGRPLPPPPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYAVR 61

Query: 65  GKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKT 124
           GKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFA VYP+  G + +REVG+T
Sbjct: 62  GKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGYNVREVGET 121

Query: 125 FSFGNRRL-DDSLALGELGFQIGDYLDVAI 148
            ++ NR+  DDS  L EL F+IGDYLDVAI
Sbjct: 122 MAYPNRKQPDDSKTLSELPFEIGDYLDVAI 151

[Close]
BLAST of MELO3C006160 vs. NCBI nr
Match: gi|659075396|ref|XP_008438121.1| (PREDICTED: histone deacetylase complex subunit SAP18 [Cucumis melo])

HSP 1 Score: 302.8 bits (774), Expect = 3.4e-79
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 

Query: 1   MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS 120

Query: 121 FGNRRLDDSLALGELGFQIGDYLDVAII 149
           FGNRRLDDSLALGELGFQIGDYLDVAII
Sbjct: 121 FGNRRLDDSLALGELGFQIGDYLDVAII 148

[Close]
BLAST of MELO3C006160 vs. NCBI nr
Match: gi|449432217|ref|XP_004133896.1| (PREDICTED: histone deacetylase complex subunit SAP18 [Cucumis sativus])

HSP 1 Score: 299.3 bits (765), Expect = 3.8e-78
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 1 

Query: 1   MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60
           MAGEAEAPRRAYG PPRATHAPPRPRLEPVDREKTCPLLLRVFTK GSHHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGGPPRATHAPPRPRLEPVDREKTCPLLLRVFTKTGSHHFNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS 120

Query: 121 FGNRRLDDSLALGELGFQIGDYLDVAII 149
           FGNRRLDDSLALGELGFQIGDYLDVAII
Sbjct: 121 FGNRRLDDSLALGELGFQIGDYLDVAII 148

[Close]
BLAST of MELO3C006160 vs. NCBI nr
Match: gi|596010175|ref|XP_007218562.1| (hypothetical protein PRUPE_ppa012935mg [Prunus persica])

HSP 1 Score: 240.0 bits (611), Expect = 2.7e-60
Identity = 115/148 (77.70%), Postives = 127/148 (85.81%), Query Frame = 1 

Query: 1   MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60
           MAG A+AP+RA     R   +PPRPR  PVDREKTCPLLLRVFTK+GSHH NEDFAVRGK
Sbjct: 1   MAGVAQAPKRALAPQGRGLRSPPRPRFAPVDREKTCPLLLRVFTKVGSHHTNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS 120
           EP+DEVQIYTWKDA LRELTDLVKEVAP ARRRNAKLSFA+VYPDRHG FV++EVG+T S
Sbjct: 61  EPKDEVQIYTWKDANLRELTDLVKEVAPAARRRNAKLSFAIVYPDRHGHFVVKEVGRTLS 120

Query: 121 FGNRRLDDSLALGELGFQIGDYLDVAII 149
           +GN RLDD+  L ELGF IGDYLDVAI+
Sbjct: 121 YGNGRLDDAKVLAELGFAIGDYLDVAIM 148

[Close]
BLAST of MELO3C006160 vs. NCBI nr
Match: gi|645253992|ref|XP_008232830.1| (PREDICTED: histone deacetylase complex subunit SAP18 [Prunus mume])

HSP 1 Score: 238.8 bits (608), Expect = 6.1e-60
Identity = 114/148 (77.03%), Postives = 127/148 (85.81%), Query Frame = 1 

Query: 1   MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60
           MAG A+AP+RA     R   +PPRPR  PVDREKTCPLLLRVFTK+GSHH NEDFAVRGK
Sbjct: 1   MAGVAQAPKRALAPQGRGPRSPPRPRFAPVDREKTCPLLLRVFTKVGSHHTNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS 120
           EP+DEVQIYTW+DA LRELTDLVKEVAP ARRRNAKLSFA+VYPDRHG FV++EVG+T S
Sbjct: 61  EPKDEVQIYTWRDANLRELTDLVKEVAPAARRRNAKLSFAIVYPDRHGHFVVKEVGRTLS 120

Query: 121 FGNRRLDDSLALGELGFQIGDYLDVAII 149
           +GN RLDD+  L ELGF IGDYLDVAI+
Sbjct: 121 YGNGRLDDAKVLAELGFAIGDYLDVAIM 148

[Close]
BLAST of MELO3C006160 vs. NCBI nr
Match: gi|1009162262|ref|XP_015899343.1| (PREDICTED: histone deacetylase complex subunit SAP18 [Ziziphus jujuba])

HSP 1 Score: 237.7 bits (605), Expect = 1.4e-59
Identity = 118/148 (79.73%), Postives = 127/148 (85.81%), Query Frame = 1 

Query: 1   MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60
           MAG A+AP+R    P R       PR EPVDREKTCPLLLRVFTKIGSHH NEDFAVRGK
Sbjct: 43  MAGVADAPKRTLPPPLRG------PRFEPVDREKTCPLLLRVFTKIGSHHANEDFAVRGK 102

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS 120
           EP+DEVQIYTWKDATLRE+TDLVKEVAP ARRRNAKLSFA VYPD+HGRF++REVGKTFS
Sbjct: 103 EPKDEVQIYTWKDATLREITDLVKEVAPAARRRNAKLSFAFVYPDKHGRFLVREVGKTFS 162

Query: 121 FGNRRLDDSLALGELGFQIGDYLDVAII 149
           +GN RLDD  AL ELGFQIGDYLDVAI+
Sbjct: 163 YGNGRLDDGKALAELGFQIGDYLDVAIL 184

The following BLAST results are available for this feature:
BLAST of MELO3C006160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SAP18_ARATH4.8e-4968.00Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana GN=At2g45640 P... [more]
SAP18_BOVIN2.1e-2853.72Histone deacetylase complex subunit SAP18 OS=Bos taurus GN=SAP18 PE=2 SV=1[more]
SAP18_HUMAN2.1e-2853.72Histone deacetylase complex subunit SAP18 OS=Homo sapiens GN=SAP18 PE=1 SV=1[more]
SAP18_PONAB2.1e-2853.72Histone deacetylase complex subunit SAP18 OS=Pongo abelii GN=SAP18 PE=2 SV=1[more]
SAP18_MOUSE2.7e-2853.72Histone deacetylase complex subunit SAP18 OS=Mus musculus GN=Sap18 PE=1 SV=1[more]
BLAST of MELO3C006160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6C9_CUCSA2.6e-7898.65Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124880 PE=4 SV=1[more]
M5X2P5_PRUPE1.9e-6077.70Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012935mg PE=4 SV=1[more]
W9S5P2_9ROSA1.0e-5878.38Uncharacterized protein OS=Morus notabilis GN=L484_020767 PE=4 SV=1[more]
A0A0D2SA62_GOSRA3.0e-5877.12Uncharacterized protein OS=Gossypium raimondii GN=B456_007G093600 PE=4 SV=1[more]
A0A0B0NV41_GOSAR3.0e-5877.12Uncharacterized protein OS=Gossypium arboreum GN=F383_21512 PE=4 SV=1[more]
BLAST of MELO3C006160 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G45640.12.7e-5068.00 SIN3 associated polypeptide P18[more]
BLAST of MELO3C006160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075396|ref|XP_008438121.1|3.4e-79100.00PREDICTED: histone deacetylase complex subunit SAP18 [Cucumis melo][more]
gi|449432217|ref|XP_004133896.1|3.8e-7898.65PREDICTED: histone deacetylase complex subunit SAP18 [Cucumis sativus][more]
gi|596010175|ref|XP_007218562.1|2.7e-6077.70hypothetical protein PRUPE_ppa012935mg [Prunus persica][more]
gi|645253992|ref|XP_008232830.1|6.1e-6077.03PREDICTED: histone deacetylase complex subunit SAP18 [Prunus mume][more]
gi|1009162262|ref|XP_015899343.1|1.4e-5979.73PREDICTED: histone deacetylase complex subunit SAP18 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010516SAP18
IPR010516SAP18
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009062 fatty acid catabolic process
biological_process GO:0009651 response to salt stress
biological_process GO:0008150 biological_process
cellular_component GO:0005730 nucleolus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU49617melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006160T1MELO3C006160T1mRNA
MELO3C006160T2MELO3C006160T2mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU49617MU49617transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010516Sin3 associated polypeptide p18PANTHERPTHR13082SAP18coord: 9..109
score: 1.5
IPR010516Sin3 associated polypeptide p18PFAMPF06487SAP18coord: 29..109
score: 4.6
NoneNo IPR availablePANTHERPTHR13082:SF0HISTONE DEACETYLASE COMPLEX SUBUNIT SAP18coord: 9..109
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006160Csa3G124880Cucumber (Chinese Long) v2cumeB236
MELO3C006160Cla021281Watermelon (97103) v1mewmB461
MELO3C006160ClCG05G001990Watermelon (Charleston Gray)mewcgB427
MELO3C006160Cla97C05G082440Watermelon (97103) v2mewmbB434
MELO3C006160Bhi01G000217Wax gourdmewgoB543
MELO3C006160CSPI03G09290Wild cucumber (PI 183967)cpimeB230
MELO3C006160Cucsa.257900Cucumber (Gy14) v1cgymeB439
MELO3C006160CmaCh06G011170Cucurbita maxima (Rimu)cmameB763
MELO3C006160CmoCh06G011440Cucurbita moschata (Rifu)cmomeB755
MELO3C006160Lsi05G019900Bottle gourd (USVL1VR-Ls)lsimeB378
MELO3C006160Cp4.1LG08g01790Cucurbita pepo (Zucchini)cpemeB813
MELO3C006160CsGy3G009370Cucumber (Gy14) v2cgybmeB200
MELO3C006160Carg23889Silver-seed gourdcarmeB0494
MELO3C006160CsaV3_3G009410Cucumber (Chinese Long) v3cucmeB236
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006160Cucurbita maxima (Rimu)cmameB242
MELO3C006160Cucurbita maxima (Rimu)cmameB851
MELO3C006160Cucurbita moschata (Rifu)cmomeB230
MELO3C006160Cucurbita moschata (Rifu)cmomeB833
MELO3C006160Wild cucumber (PI 183967)cpimeB401
MELO3C006160Wild cucumber (PI 183967)cpimeB496
MELO3C006160Cucumber (Chinese Long) v2cumeB494
MELO3C006160Watermelon (Charleston Gray)mewcgB438
MELO3C006160Watermelon (97103) v1mewmB479
MELO3C006160Watermelon (97103) v1mewmB484
MELO3C006160Cucurbita pepo (Zucchini)cpemeB317
MELO3C006160Cucurbita pepo (Zucchini)cpemeB585
MELO3C006160Bottle gourd (USVL1VR-Ls)lsimeB034
MELO3C006160Cucumber (Gy14) v2cgybmeB352
MELO3C006160Cucumber (Gy14) v2cgybmeB435
MELO3C006160Silver-seed gourdcarmeB0622
MELO3C006160Cucumber (Chinese Long) v3cucmeB412
MELO3C006160Cucumber (Chinese Long) v3cucmeB506
MELO3C006160Watermelon (97103) v2mewmbB422
MELO3C006160Watermelon (97103) v2mewmbB445
MELO3C006160Melon (DHL92) v3.5.1memeB019
MELO3C006160Melon (DHL92) v3.5.1memeB054
MELO3C006160Cucumber (Gy14) v1cgymeB500
MELO3C006160Cucumber (Gy14) v1cgymeB594