Cla021281 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla021281
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Histone deacetylase complex subunit SAP18 (AHRD V1 ***- B4FIB4_MAIZE); contains Interpro domain(s) IPR010516 Sin3 associated polypeptide p18
Location	Chr5 : 1806850 .. 1809595 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGAGAAACAGAAGCACCAAGGAGGAATTATGGCGCTCTTCCAAGAGCCCCTCACGCTCCTCCCCGTCCTCGTTTGGAGCCCGTTGATCGCGAAAAGGTTTCTCTCTTTCTCTTCTCTAATTTTAGGGTTTCTGTCCCTTCCGTCGTTGTCTCTGATTTTCAATTTTGGTGTTCATTACCTTGTTATTGAATTCATCTTCATCGTCAACCGTTTTCTTGTTTCTTTGTTCTAGAATAGAACGTCATAGAAATCTCATTATTTGAAACTTTGATTATTGCCTTTTCGCTACCTATTAGCGTTCGGAGCTGGCTGTGTAAGCATAGATGGCAACTTTCATTTTCTATGCTGAGTAATTTTGTTTCTCTCCCTGCAGACTTGTCCTTTGCTGCTTCGTGTTTTCACGAAGGTACGTTGTATTTTGATGCTGGATTTTGTTTTTATGAATTTTGTGTCGTATCTATGCAAAGTACTCAAAGAACAAGTGTGTTTCATCGCTTCAGGAACTGTAGTTTAATCCAGCCGACGTATCAATAGGGATGAAATGAAGTGCGTTGGGTGTAAAATTTGTGTGGAATTTTCAAGTTTATGTCACTGTGTGGACAATAGGATTTAGGAATCTGATGAGAGGATAATTTAAGCAAATTTCCAGGGTTTCGTTGCTACATTTAGGTTATGAGGCGTCTGGTTCTAAGTAATGCCACATTTGGATTATGGAAGATTCCTTTGGCTGTTTTTGTTAATTTTTGACAGATTGGGAGTCATCATTTCAATGAAGACTTTGCTGTGAGAGGCAAGGAGCCGAGGGATGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGCGAGCTAACTGATCTGGTTGTATTTCGCATTCCTTTTCAATCTCTTGTCCCTCCACGCTTTGCATGACTTAAATACCAATGATCTGTATCTTTTTGAATTTATATACATGATGCCTTCATAGGAACTATTTTCCCTTCCATTGCCCCTTGAACTTACGTGTCTGTACATTTTCTTTACCCTTTGGGTGGGGGAGTTTACAGGTCAAAGAGGTAGCTCCGGAAGCCAGGAGGAGAAATGCTAAACTTTCCTTCGCTTTGGTGTATCCGGATAGACATGGCCGCTTTGTATTGAGAGAGGTATCTATTTCTCTCCTCTCCCACGTACGTCATGCATGCACACATATATTTATGCTTTCAGGAGGCGCTTTTTACTTAGTTAAGTGTGTCAAAATGAACACCCAAGTTGAATGAGGTAAAATTATTATTTGTTCATTTATCAAATACAGGCGAGCCAAAGAGAGCTTACCTCAATTTGGCATGAACTATTGTCAATGATGAAGGAGTATGAGGTTTGAAACTTATCAAAACTAGGCTAGATATTGCCCAAAAATTCATACCACAAATACTCAAAATGTAGCCATATTATTAATTAGATTCGACCAGAAAAGCATAAACACTCGTACAAGTTCTAGCTACAAAAACTGAACGACAAAGTGCACAAACCTAGCCAAACAAATGCTTAACTACATAAATTAGTACTCATGATTATAATGTTTCCAACTACAAGAATGCCATAAACGTCAAAGAAAAAAATGACACTTGAACTAAGGGGAAGTATTGAAGTAATTATTTATTTCAGTTTTGGTATCAATTCAATGAAATTAAGATTGTAGGGTTGGATTTTACTCACTCGACCAAGTGCTGAAAAAAATGTTTCTCAATGTCCATCCTGTTCGTCTATGACTTGTTCAATTGGGACAATGTTTTCAGACTGGACTCTTTCATAGTCTTAAGAAAGTTTGAAGGCCACCATTTTGTTAAAAGATGGGTCGTTCTACTTCTTGGACATACGAAGACATTAAACATGCTGAACTTGTGCTTAATTTGCATACTCTTGCATGACTGTGATGGAGAAGCTGCCAAATTAAATTCATTTAGTGCTGAGAGGGGACGACAACTTGGTGCAGGGTGACTTACTAAATTAGGCTGAACTGAAAACTTTTGTACTGAACCATTCTGTCTTCCTGCCCTGCTGTTGCTTGCAGTTTCCTTAGCCGCATAGATTTTTCTGTATAAGGGCTTAAGTTTGAGATATAAATGAATTCGTGATAAATTGCCCTCACTTACTTGACCTTTTGTAATTTAACTTTACAAATGTATGAAGAAAGCAAATTTTGAGTCCTAGCTTTTAGTAGATATTATTAGCTACCATTTTGAAGATTGGTGGTTTGATCTCCATCTCTCCAATTGTTTTCTTGAGGATCCCACGTCGAAAAGACGAAGCTATCTCACAATCTTTAAAAGACACATAAGTTACTCTTCTGATTATCAATTAATTTTGAGATTGAACCGTATGGTATCATAGCTCATGAAGCTTGAATGAGTATTTGGTCCAAAACGTTGGGGGGGGGATCTCATCCCACGTCGGAAAGATGAAGAAACCTCACAATCTTGATAAGATACCTGAGTTATTCTCGTTTGGTTTGAAGATGGAAATTTATGATTATCTAATATATTCTTGAGTCATATGATTCTGTTTCTTTATGTGAAGGTAGGGAAGACATTCTCGTTTGGGAATGGACGATTAGACGATAGCTTGGCTTTGGCAGAACTCGGTTTTCAGGTAAAACAAACGTGGCTTTCGTTTTTGCCATATCAATCCTGTATTCCTTCTCATTCTTGCTGCAATTTTTTCCACGCAGATTGGAGATTACTTGGATGTGGCAATTGTATAA

mRNA sequence

ATGGCGGGAGAAACAGAAGCACCAAGGAGGAATTATGGCGCTCTTCCAAGAGCCCCTCACGCTCCTCCCCGTCCTCGTTTGGAGCCCGTTGATCGCGAAAAGACTTGTCCTTTGCTGCTTCGTGTTTTCACGAAGATTGGGAGTCATCATTTCAATGAAGACTTTGCTGTGAGAGGCAAGGAGCCGAGGGATGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGCGAGCTAACTGATCTGGTCAAAGAGGTAGCTCCGGAAGCCAGGAGGAGAAATGCTAAACTTTCCTTCGCTTTGGTGTATCCGGATAGACATGGCCGCTTTGTATTGAGAGAGGCGAGCCAAAGAGAGCTTACCTCAATTTGGCATGAACTATTGTCAATGATGAAGGAGTATGAGGTAGGGAAGACATTCTCGTTTGGGAATGGACGATTAGACGATAGCTTGGCTTTGGCAGAACTCGGTTTTCAGATTGGAGATTACTTGGATGTGGCAATTGTATAA

Coding sequence (CDS)

ATGGCGGGAGAAACAGAAGCACCAAGGAGGAATTATGGCGCTCTTCCAAGAGCCCCTCACGCTCCTCCCCGTCCTCGTTTGGAGCCCGTTGATCGCGAAAAGACTTGTCCTTTGCTGCTTCGTGTTTTCACGAAGATTGGGAGTCATCATTTCAATGAAGACTTTGCTGTGAGAGGCAAGGAGCCGAGGGATGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGCGAGCTAACTGATCTGGTCAAAGAGGTAGCTCCGGAAGCCAGGAGGAGAAATGCTAAACTTTCCTTCGCTTTGGTGTATCCGGATAGACATGGCCGCTTTGTATTGAGAGAGGCGAGCCAAAGAGAGCTTACCTCAATTTGGCATGAACTATTGTCAATGATGAAGGAGTATGAGGTAGGGAAGACATTCTCGTTTGGGAATGGACGATTAGACGATAGCTTGGCTTTGGCAGAACTCGGTTTTCAGATTGGAGATTACTTGGATGTGGCAATTGTATAA

Protein sequence

MAGETEAPRRNYGALPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREASQRELTSIWHELLSMMKEYEVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIV

Homology

[Close]

BLAST of Cla021281 vs. Swiss-Prot
Match: SAP18_ARATH (Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana GN=At2g45640 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.1e-44
Identity = 99/170 (58.24%), Postives = 113/170 (66.47%), Query Frame = 1


Query: 6   EAPRRNYGALPRAP------HAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRG 65
           EA RR  G  P  P        PPRP+ EPVDREKTCPLLLRVFTK G HH +ED+AVRG
Sbjct: 3   EAARRQGGGRPLPPPPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYAVRG 62

Query: 66  KEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREASQRE 125
           KEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFA VYP+  G + +R      
Sbjct: 63  KEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGYNVR------ 122

Query: 126 LTSIWHELLSMMKEYEVGKTFSFGNGRL-DDSLALAELGFQIGDYLDVAI 169
                          EVG+T ++ N +  DDS  L+EL F+IGDYLDVAI
Sbjct: 123 ---------------EVGETMAYPNRKQPDDSKTLSELPFEIGDYLDVAI 151

[Close]

BLAST of Cla021281 vs. Swiss-Prot
Match: SAP18_BOVIN (Histone deacetylase complex subunit SAP18 OS=Bos taurus GN=SAP18 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.5e-25
Identity = 67/141 (47.52%), Postives = 78/141 (55.32%), Query Frame = 1


Query: 28  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 87
           +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 88  PEARRRNAKLSFALVYPDRHGRFVLREASQRELTSIWHELLSMMKEYEVGKTFSFGNGRL 147
           PEAR++    +FA+V+ D      L+    R                E+G T S G    
Sbjct: 78  PEARKKGTHFNFAIVFTD------LKRPGYR--------------VKEIGSTMS-GRKGT 137

Query: 148 DDSLALAELGFQIGDYLDVAI 169
           DDS+ L    FQIGDYLD+AI
Sbjct: 138 DDSMTLQSQKFQIGDYLDIAI 137

[Close]

BLAST of Cla021281 vs. Swiss-Prot
Match: SAP18_MOUSE (Histone deacetylase complex subunit SAP18 OS=Mus musculus GN=Sap18 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 7.2e-25
Identity = 67/141 (47.52%), Postives = 78/141 (55.32%), Query Frame = 1


Query: 28  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 87
           +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 88  PEARRRNAKLSFALVYPDRHGRFVLREASQRELTSIWHELLSMMKEYEVGKTFSFGNGRL 147
           PEAR++    +FA+V+ D      L+    R                E+G T S G    
Sbjct: 78  PEARKKGTHFNFAIVFMD------LKRPGYR--------------VKEIGSTMS-GRKGT 137

Query: 148 DDSLALAELGFQIGDYLDVAI 169
           DDS+ L    FQIGDYLD+AI
Sbjct: 138 DDSMTLQSQKFQIGDYLDIAI 137

[Close]

BLAST of Cla021281 vs. Swiss-Prot
Match: SAP18_HUMAN (Histone deacetylase complex subunit SAP18 OS=Homo sapiens GN=SAP18 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 9.4e-25
Identity = 67/141 (47.52%), Postives = 78/141 (55.32%), Query Frame = 1


Query: 28  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 87
           +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 88  PEARRRNAKLSFALVYPDRHGRFVLREASQRELTSIWHELLSMMKEYEVGKTFSFGNGRL 147
           PEAR++    +FA+V+ D     V R                  +  E+G T S G    
Sbjct: 78  PEARKKGTHFNFAIVFTD-----VKRPG---------------YRVKEIGSTMS-GRKGT 137

Query: 148 DDSLALAELGFQIGDYLDVAI 169
           DDS+ L    FQIGDYLD+AI
Sbjct: 138 DDSMTLQSQKFQIGDYLDIAI 137

[Close]

BLAST of Cla021281 vs. Swiss-Prot
Match: SAP18_PONAB (Histone deacetylase complex subunit SAP18 OS=Pongo abelii GN=SAP18 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 9.4e-25
Identity = 67/141 (47.52%), Postives = 78/141 (55.32%), Query Frame = 1


Query: 28  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 87
           +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 88  PEARRRNAKLSFALVYPDRHGRFVLREASQRELTSIWHELLSMMKEYEVGKTFSFGNGRL 147
           PEAR++    +FA+V+ D     V R                  +  E+G T S G    
Sbjct: 78  PEARKKGTHFNFAIVFTD-----VKRPG---------------YRVKEIGSTMS-GRKGT 137

Query: 148 DDSLALAELGFQIGDYLDVAI 169
           DDS+ L    FQIGDYLD+AI
Sbjct: 138 DDSMTLQSQKFQIGDYLDIAI 137

[Close]

BLAST of Cla021281 vs. TrEMBL
Match: A0A0A0L6C9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124880 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 6.7e-70
Identity = 139/169 (82.25%), Postives = 140/169 (82.84%), Query Frame = 1


Query: 1   MAGETEAPRRNYGALPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60
           MAGE EAPRR YG  PRA HAPPRPRLEPVDREKTCPLLLRVFTK GSHHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGGPPRATHAPPRPRLEPVDREKTCPLLLRVFTKTGSHHFNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREASQREL 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLR       
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLR------- 120

Query: 121 TSIWHELLSMMKEYEVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIV 170
                         EVGKTFSFGN RLDDSLAL ELGFQIGDYLDVAI+
Sbjct: 121 --------------EVGKTFSFGNRRLDDSLALGELGFQIGDYLDVAII 148

[Close]

BLAST of Cla021281 vs. TrEMBL
Match: M5X2P5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012935mg PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.4e-56
Identity = 115/169 (68.05%), Postives = 127/169 (75.15%), Query Frame = 1


Query: 1   MAGETEAPRRNYGALPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60
           MAG  +AP+R      R   +PPRPR  PVDREKTCPLLLRVFTK+GSHH NEDFAVRGK
Sbjct: 1   MAGVAQAPKRALAPQGRGLRSPPRPRFAPVDREKTCPLLLRVFTKVGSHHTNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREASQREL 120
           EP+DEVQIYTWKDA LRELTDLVKEVAP ARRRNAKLSFA+VYPDRHG FV++       
Sbjct: 61  EPKDEVQIYTWKDANLRELTDLVKEVAPAARRRNAKLSFAIVYPDRHGHFVVK------- 120

Query: 121 TSIWHELLSMMKEYEVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIV 170
                         EVG+T S+GNGRLDD+  LAELGF IGDYLDVAI+
Sbjct: 121 --------------EVGRTLSYGNGRLDDAKVLAELGFAIGDYLDVAIM 148

[Close]

BLAST of Cla021281 vs. TrEMBL
Match: W9S5P2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020767 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 7.2e-56
Identity = 119/170 (70.00%), Postives = 129/170 (75.88%), Query Frame = 1


Query: 1   MAGETEAPRRNYGALPRAPHAPPR-PRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRG 60
           MAG +E P+R        P  PPR PR EPVDREKTCPLLLRVFTKIG HH NEDFAVRG
Sbjct: 1   MAGLSEGPKR-------PPPPPPRGPRFEPVDREKTCPLLLRVFTKIGGHHANEDFAVRG 60

Query: 61  KEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREASQRE 120
           KEP+DEVQIYTWKDATLRE+TDLVKEVA  ARRRNAKLSFA VYPD+HGRF++R      
Sbjct: 61  KEPKDEVQIYTWKDATLREITDLVKEVASAARRRNAKLSFAFVYPDKHGRFLVR------ 120

Query: 121 LTSIWHELLSMMKEYEVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIV 170
                          EVGKTFS+GNGRLDD+ ALAELGFQIGDYLDVAI+
Sbjct: 121 ---------------EVGKTFSYGNGRLDDNKALAELGFQIGDYLDVAIL 142

[Close]

BLAST of Cla021281 vs. TrEMBL
Match: D7U7P2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g01290 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.6e-55
Identity = 122/173 (70.52%), Postives = 128/173 (73.99%), Query Frame = 1


Query: 1   MAGETEAPRRNYGALP---RAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAV 60
           MAG  E P+R    LP   R P  PPRPR EPVDREKTCPLLLRVFTKIG HH  EDFAV
Sbjct: 1   MAGAGEGPKRAGRPLPPPGRGPPPPPRPRFEPVDREKTCPLLLRVFTKIGCHHSKEDFAV 60

Query: 61  RGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREASQ 120
           RGKEP+DEVQIYTWKDATLRELTDLVKEVAP ARRR+A LSFA VYPD +GRFVLR    
Sbjct: 61  RGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRDAILSFAFVYPDTNGRFVLR---- 120

Query: 121 RELTSIWHELLSMMKEYEVGKTFSFGNG-RLDDSLALAELGFQIGDYLDVAIV 170
                            EVGKTFS+GNG RLDD  ALAELGFQIGDYLDVAI+
Sbjct: 121 -----------------EVGKTFSYGNGKRLDDGKALAELGFQIGDYLDVAIL 152

[Close]

BLAST of Cla021281 vs. TrEMBL
Match: A0A151UCC8_CAJCA (Histone deacetylase complex subunit SAP18 OS=Cajanus cajan GN=KK1_021205 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.8e-54
Identity = 119/171 (69.59%), Postives = 128/171 (74.85%), Query Frame = 1


Query: 5   TEAPRRNYG-ALPRAPHAPP-----RPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVR 64
           +E  +R  G ALP  P  PP     RPRLEPVDREKTCPLLLRVFTKIGSHH  EDFAVR
Sbjct: 2   SEGGKRQGGRALPPPPRGPPPPPPSRPRLEPVDREKTCPLLLRVFTKIGSHHSMEDFAVR 61

Query: 65  GKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREASQR 124
           GKEP+DEVQIYTWKDATLRELTDLVKEVAP ARRRNAKLSFA V+PD++GRF        
Sbjct: 62  GKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRNAKLSFAFVFPDKNGRF-------- 121

Query: 125 ELTSIWHELLSMMKEYEVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIV 170
                        K  EVGKT S+GNGRLDDS ALAELGF+IGDYLDVAI+
Sbjct: 122 -------------KVQEVGKTLSYGNGRLDDSKALAELGFEIGDYLDVAIL 151

[Close]

BLAST of Cla021281 vs. NCBI nr
Match: gi|659075396|ref|XP_008438121.1| (PREDICTED: histone deacetylase complex subunit SAP18 [Cucumis melo])

HSP 1 Score: 275.0 bits (702), Expect = 8.7e-71
Identity = 141/169 (83.43%), Postives = 142/169 (84.02%), Query Frame = 1


Query: 1   MAGETEAPRRNYGALPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60
           MAGE EAPRR YGA PRA HAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREASQREL 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLR       
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLR------- 120

Query: 121 TSIWHELLSMMKEYEVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIV 170
                         EVGKTFSFGN RLDDSLAL ELGFQIGDYLDVAI+
Sbjct: 121 --------------EVGKTFSFGNRRLDDSLALGELGFQIGDYLDVAII 148

[Close]

BLAST of Cla021281 vs. NCBI nr
Match: gi|449432217|ref|XP_004133896.1| (PREDICTED: histone deacetylase complex subunit SAP18 [Cucumis sativus])

HSP 1 Score: 271.6 bits (693), Expect = 9.6e-70
Identity = 139/169 (82.25%), Postives = 140/169 (82.84%), Query Frame = 1


Query: 1   MAGETEAPRRNYGALPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60
           MAGE EAPRR YG  PRA HAPPRPRLEPVDREKTCPLLLRVFTK GSHHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGGPPRATHAPPRPRLEPVDREKTCPLLLRVFTKTGSHHFNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREASQREL 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLR       
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLR------- 120

Query: 121 TSIWHELLSMMKEYEVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIV 170
                         EVGKTFSFGN RLDDSLAL ELGFQIGDYLDVAI+
Sbjct: 121 --------------EVGKTFSFGNRRLDDSLALGELGFQIGDYLDVAII 148

[Close]

BLAST of Cla021281 vs. NCBI nr
Match: gi|645253992|ref|XP_008232830.1| (PREDICTED: histone deacetylase complex subunit SAP18 [Prunus mume])

HSP 1 Score: 229.9 bits (585), Expect = 3.2e-57
Identity = 115/169 (68.05%), Postives = 128/169 (75.74%), Query Frame = 1


Query: 1   MAGETEAPRRNYGALPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60
           MAG  +AP+R      R P +PPRPR  PVDREKTCPLLLRVFTK+GSHH NEDFAVRGK
Sbjct: 1   MAGVAQAPKRALAPQGRGPRSPPRPRFAPVDREKTCPLLLRVFTKVGSHHTNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREASQREL 120
           EP+DEVQIYTW+DA LRELTDLVKEVAP ARRRNAKLSFA+VYPDRHG FV++       
Sbjct: 61  EPKDEVQIYTWRDANLRELTDLVKEVAPAARRRNAKLSFAIVYPDRHGHFVVK------- 120

Query: 121 TSIWHELLSMMKEYEVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIV 170
                         EVG+T S+GNGRLDD+  LAELGF IGDYLDVAI+
Sbjct: 121 --------------EVGRTLSYGNGRLDDAKVLAELGFAIGDYLDVAIM 148

[Close]

BLAST of Cla021281 vs. NCBI nr
Match: gi|596010175|ref|XP_007218562.1| (hypothetical protein PRUPE_ppa012935mg [Prunus persica])

HSP 1 Score: 227.3 bits (578), Expect = 2.1e-56
Identity = 115/169 (68.05%), Postives = 127/169 (75.15%), Query Frame = 1


Query: 1   MAGETEAPRRNYGALPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60
           MAG  +AP+R      R   +PPRPR  PVDREKTCPLLLRVFTK+GSHH NEDFAVRGK
Sbjct: 1   MAGVAQAPKRALAPQGRGLRSPPRPRFAPVDREKTCPLLLRVFTKVGSHHTNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREASQREL 120
           EP+DEVQIYTWKDA LRELTDLVKEVAP ARRRNAKLSFA+VYPDRHG FV++       
Sbjct: 61  EPKDEVQIYTWKDANLRELTDLVKEVAPAARRRNAKLSFAIVYPDRHGHFVVK------- 120

Query: 121 TSIWHELLSMMKEYEVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIV 170
                         EVG+T S+GNGRLDD+  LAELGF IGDYLDVAI+
Sbjct: 121 --------------EVGRTLSYGNGRLDDAKVLAELGFAIGDYLDVAIM 148

[Close]

BLAST of Cla021281 vs. NCBI nr
Match: gi|703138466|ref|XP_010106748.1| (hypothetical protein L484_020767 [Morus notabilis])

HSP 1 Score: 224.9 bits (572), Expect = 1.0e-55
Identity = 119/170 (70.00%), Postives = 129/170 (75.88%), Query Frame = 1


Query: 1   MAGETEAPRRNYGALPRAPHAPPR-PRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRG 60
           MAG +E P+R        P  PPR PR EPVDREKTCPLLLRVFTKIG HH NEDFAVRG
Sbjct: 1   MAGLSEGPKR-------PPPPPPRGPRFEPVDREKTCPLLLRVFTKIGGHHANEDFAVRG 60

Query: 61  KEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREASQRE 120
           KEP+DEVQIYTWKDATLRE+TDLVKEVA  ARRRNAKLSFA VYPD+HGRF++R      
Sbjct: 61  KEPKDEVQIYTWKDATLREITDLVKEVASAARRRNAKLSFAFVYPDKHGRFLVR------ 120

Query: 121 LTSIWHELLSMMKEYEVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIV 170
                          EVGKTFS+GNGRLDD+ ALAELGFQIGDYLDVAI+
Sbjct: 121 ---------------EVGKTFSYGNGRLDDNKALAELGFQIGDYLDVAIL 142

The following BLAST results are available for this feature:

BLAST of Cla021281 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAP18_ARATH	3.1e-44	58.24	Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana GN=At2g45640 P...	[more]
SAP18_BOVIN	5.5e-25	47.52	Histone deacetylase complex subunit SAP18 OS=Bos taurus GN=SAP18 PE=2 SV=1	[more]
SAP18_MOUSE	7.2e-25	47.52	Histone deacetylase complex subunit SAP18 OS=Mus musculus GN=Sap18 PE=1 SV=1	[more]
SAP18_HUMAN	9.4e-25	47.52	Histone deacetylase complex subunit SAP18 OS=Homo sapiens GN=SAP18 PE=1 SV=1	[more]
SAP18_PONAB	9.4e-25	47.52	Histone deacetylase complex subunit SAP18 OS=Pongo abelii GN=SAP18 PE=2 SV=1	[more]

BLAST of Cla021281 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6C9_CUCSA	6.7e-70	82.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124880 PE=4 SV=1	[more]
M5X2P5_PRUPE	1.4e-56	68.05	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012935mg PE=4 SV=1	[more]
W9S5P2_9ROSA	7.2e-56	70.00	Uncharacterized protein OS=Morus notabilis GN=L484_020767 PE=4 SV=1	[more]
D7U7P2_VITVI	1.6e-55	70.52	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g01290 PE=4 SV=...	[more]
A0A151UCC8_CAJCA	1.8e-54	69.59	Histone deacetylase complex subunit SAP18 OS=Cajanus cajan GN=KK1_021205 PE=4 SV...	[more]

BLAST of Cla021281 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075396\|ref\|XP_008438121.1\|	8.7e-71	83.43	PREDICTED: histone deacetylase complex subunit SAP18 [Cucumis melo]	[more]
gi\|449432217\|ref\|XP_004133896.1\|	9.6e-70	82.25	PREDICTED: histone deacetylase complex subunit SAP18 [Cucumis sativus]	[more]
gi\|645253992\|ref\|XP_008232830.1\|	3.2e-57	68.05	PREDICTED: histone deacetylase complex subunit SAP18 [Prunus mume]	[more]
gi\|596010175\|ref\|XP_007218562.1\|	2.1e-56	68.05	hypothetical protein PRUPE_ppa012935mg [Prunus persica]	[more]
gi\|703138466\|ref\|XP_010106748.1\|	1.0e-55	70.00	hypothetical protein L484_020767 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010516	SAP18

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009062	fatty acid catabolic process
biological_process	GO:0009651	response to salt stress
biological_process	GO:0009737	response to abscisic acid
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU29858	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU37075	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla021281	Cla021281.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU29858	WMU29858	transcribed_cluster
WMU37075	WMU37075	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010516	Sin3 associated polypeptide p18	PANTHER	PTHR13082	SAP18	coord: 135..169 score: 9.0E-66coord: 9..113 score: 9.0
IPR010516	Sin3 associated polypeptide p18	PFAM	PF06487	SAP18	coord: 29..168 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla021281	Cla97C05G082440	Watermelon (97103) v2	wmwmbB206
Cla021281	Csa3G124880	Cucumber (Chinese Long) v2	cuwmB233
Cla021281	MELO3C006160	Melon (DHL92) v3.5.1	mewmB461
Cla021281	ClCG05G001990	Watermelon (Charleston Gray)	wcgwmB286
Cla021281	CSPI03G09290	Wild cucumber (PI 183967)	cpiwmB231
Cla021281	Cucsa.257900	Cucumber (Gy14) v1	cgywmB479
Cla021281	CmaCh06G011170	Cucurbita maxima (Rimu)	cmawmB798
Cla021281	CmoCh06G011440	Cucurbita moschata (Rifu)	cmowmB793
Cla021281	Lsi05G019900	Bottle gourd (USVL1VR-Ls)	lsiwmB365
Cla021281	Cp4.1LG08g01790	Cucurbita pepo (Zucchini)	cpewmB845
Cla021281	CsGy3G009370	Cucumber (Gy14) v2	cgybwmB217
Cla021281	MELO3C006160.2	Melon (DHL92) v3.6.1	medwmB447
Cla021281	Carg23889	Silver-seed gourd	carwmB0483
Cla021281	CsaV3_3G009410	Cucumber (Chinese Long) v3	cucwmB239
Cla021281	Bhi01G000217	Wax gourd	wgowmB214

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla021281	Silver-seed gourd	carwmB0617
Cla021281	Silver-seed gourd	carwmB0936
Cla021281	Silver-seed gourd	carwmB1076
Cla021281	Cucumber (Chinese Long) v3	cucwmB517
Cla021281	Watermelon (97103) v2	wmwmbB214
Cla021281	Watermelon (97103) v1	wmwmB137
Cla021281	Cucumber (Gy14) v1	cgywmB663
Cla021281	Cucurbita maxima (Rimu)	cmawmB242
Cla021281	Cucurbita maxima (Rimu)	cmawmB870
Cla021281	Cucurbita moschata (Rifu)	cmowmB231
Cla021281	Cucurbita moschata (Rifu)	cmowmB857
Cla021281	Melon (DHL92) v3.5.1	mewmB098
Cla021281	Watermelon (Charleston Gray)	wcgwmB327
Cla021281	Cucumber (Chinese Long) v2	cuwmB493
Cla021281	Cucurbita pepo (Zucchini)	cpewmB332
Cla021281	Cucurbita pepo (Zucchini)	cpewmB613
Cla021281	Bottle gourd (USVL1VR-Ls)	lsiwmB022
Cla021281	Cucumber (Gy14) v2	cgybwmB459
Cla021281	Melon (DHL92) v3.6.1	medwmB096