MELO3C006062 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATATAAAAAACGGGAATCGCCACATTATCCTCCGCCCCACTACTCTCCTCTCCTTCTTCAAACCATTTGGATTTTGATCAGTGCTTCCACACAAATTCCCCTCCTTTTGGAGAAGGAGAATTCGACCATCCATCAATGGCGTCTTCCAATCCTACTACTAGGGCTTTCAAAGCTCTCTTCACCATCTTCTCTCTCATCTTCTTCATTCTTTCTCCACTCGTTGACGCCGCAGCACCTTCTCCCGCTCCCGCTCCCGCTCCCGCTAGCGACGGTATCTACCTACATTCCTTGTTTATGCATTCTCCTTCTCTTCTTTGTTGATTGATACTGAGTAAACTAGGTCTTGCTTTCAAATTATTAGGGTTAGGGATTTCTGTTGTGAGAAAAATAAGGGAATAATGTTTTGATTTTGTAATTGTGAAAACAGGGACCTCCATTGATCAGGGGATTGCGTACGTTCTGATGCTAGTGGCGTTGGTTCTCACGTATCTAATTCACCCTCTCGATGCATCTTTCTTACAATTTTTTTCTGAATTGAATTGAATTCTTCTTCCTAGGATTGTAGCAATGTAGGCGTTGTTTGTGGACGTTTGAGAAGGAACGAGACCCATTTTTTCTTCTCTCTTTTTGTGATAAAATCAAAAGTGTATATTTGGGTTCCACAGATTTTGATCAATTGCTCCATTTAATTCATTGTTTATTCGGTTAC ATATAAAAAACGGGAATCGCCACATTATCCTCCGCCCCACTACTCTCCTCTCCTTCTTCAAACCATTTGGATTTTGATCAGTGCTTCCACACAAATTCCCCTCCTTTTGGAGAAGGAGAATTCGACCATCCATCAATGGCGTCTTCCAATCCTACTACTAGGGCTTTCAAAGCTCTCTTCACCATCTTCTCTCTCATCTTCTTCATTCTTTCTCCACTCGTTGACGCCGCAGCACCTTCTCCCGCTCCCGCTCCCGCTCCCGCTAGCGACGGGACCTCCATTGATCAGGGGATTGCGTACGTTCTGATGCTAGTGGCGTTGGTTCTCACGTATCTAATTCACCCTCTCGATGCATCTTTCTTACAATTTTTTTCTGAATTGAATTGAATTCTTCTTCCTAGGATTGTAGCAATGTAGGCGTTGTTTGTGGACGTTTGAGAAGGAACGAGACCCATTTTTTCTTCTCTCTTTTTGTGATAAAATCAAAAGTGTATATTTGGGTTCCACAGATTTTGATCAATTGCTCCATTTAATTCATTGTTTATTCGGTTAC ATGGCGTCTTCCAATCCTACTACTAGGGCTTTCAAAGCTCTCTTCACCATCTTCTCTCTCATCTTCTTCATTCTTTCTCCACTCGTTGACGCCGCAGCACCTTCTCCCGCTCCCGCTCCCGCTCCCGCTAGCGACGGGACCTCCATTGATCAGGGGATTGCGTACGTTCTGATGCTAGTGGCGTTGGTTCTCACGTATCTAATTCACCCTCTCGATGCATCTTTCTTACAATTTTTTTCTGAATTGAATTGA MASSNPTTRAFKALFTIFSLIFFILSPLVDAAAPSPAPAPAPASDGTSIDQGIAYVLMLVALVLTYLIHPLDASFLQFFSELN*
BLAST of MELO3C006062 vs. Swiss-Prot
Match: AGP16_ARATH (Arabinogalactan peptide 16 OS=Arabidopsis thaliana GN=AGP16 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 5.2e-16 Identity = 48/74 (64.86%), Postives = 52/74 (70.27%), Query Frame = 1
BLAST of MELO3C006062 vs. Swiss-Prot
Match: AGP20_ARATH (Arabinogalactan peptide 20 OS=Arabidopsis thaliana GN=AGP20 PE=3 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 5.2e-16 Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = 1
BLAST of MELO3C006062 vs. Swiss-Prot
Match: AGP22_ARATH (Arabinogalactan peptide 22 OS=Arabidopsis thaliana GN=AGP22 PE=3 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 5.0e-11 Identity = 35/56 (62.50%), Postives = 40/56 (71.43%), Query Frame = 1
BLAST of MELO3C006062 vs. TrEMBL
Match: A0A0A0L7A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G120410 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 1.5e-25 Identity = 65/79 (82.28%), Postives = 69/79 (87.34%), Query Frame = 1
BLAST of MELO3C006062 vs. TrEMBL
Match: A0A061DUP4_THECC (Arabinogalactan protein 20 OS=Theobroma cacao GN=TCM_005200 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 5.0e-18 Identity = 51/73 (69.86%), Postives = 59/73 (80.82%), Query Frame = 1
BLAST of MELO3C006062 vs. TrEMBL
Match: A9PBL3_POPTR (Arabinogalactan-protein OS=Populus trichocarpa GN=POPTR_0014s09050g PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 4.3e-17 Identity = 50/71 (70.42%), Postives = 57/71 (80.28%), Query Frame = 1
BLAST of MELO3C006062 vs. TrEMBL
Match: V4TCW6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023364mg PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 9.5e-17 Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 1
BLAST of MELO3C006062 vs. TrEMBL
Match: A0A0D2TCU0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G105900 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.2e-16 Identity = 50/71 (70.42%), Postives = 56/71 (78.87%), Query Frame = 1
BLAST of MELO3C006062 vs. TAIR10
Match: AT2G46330.1 (AT2G46330.1 arabinogalactan protein 16) HSP 1 Score: 84.7 bits (208), Expect = 2.9e-17 Identity = 48/74 (64.86%), Postives = 52/74 (70.27%), Query Frame = 1
BLAST of MELO3C006062 vs. TAIR10
Match: AT3G61640.1 (AT3G61640.1 arabinogalactan protein 20) HSP 1 Score: 84.7 bits (208), Expect = 2.9e-17 Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = 1
BLAST of MELO3C006062 vs. TAIR10
Match: AT5G24105.1 (AT5G24105.1 arabinogalactan protein 41) HSP 1 Score: 79.7 bits (195), Expect = 9.4e-16 Identity = 44/62 (70.97%), Postives = 47/62 (75.81%), Query Frame = 1
BLAST of MELO3C006062 vs. TAIR10
Match: AT5G53250.1 (AT5G53250.1 arabinogalactan protein 22) HSP 1 Score: 68.2 bits (165), Expect = 2.8e-12 Identity = 35/56 (62.50%), Postives = 40/56 (71.43%), Query Frame = 1
BLAST of MELO3C006062 vs. NCBI nr
Match: gi|449432096|ref|XP_004133836.1| (PREDICTED: arabinogalactan peptide 20 [Cucumis sativus]) HSP 1 Score: 123.2 bits (308), Expect = 2.1e-25 Identity = 65/79 (82.28%), Postives = 69/79 (87.34%), Query Frame = 1
BLAST of MELO3C006062 vs. NCBI nr
Match: gi|590721494|ref|XP_007051629.1| (Arabinogalactan protein 20 [Theobroma cacao]) HSP 1 Score: 98.2 bits (243), Expect = 7.2e-18 Identity = 51/73 (69.86%), Postives = 59/73 (80.82%), Query Frame = 1
BLAST of MELO3C006062 vs. NCBI nr
Match: gi|224130474|ref|XP_002320846.1| (arabinogalactan-protein [Populus trichocarpa]) HSP 1 Score: 95.1 bits (235), Expect = 6.1e-17 Identity = 50/71 (70.42%), Postives = 57/71 (80.28%), Query Frame = 1
BLAST of MELO3C006062 vs. NCBI nr
Match: gi|743789959|ref|XP_011037662.1| (PREDICTED: arabinogalactan peptide 20 [Populus euphratica]) HSP 1 Score: 94.7 bits (234), Expect = 8.0e-17 Identity = 50/71 (70.42%), Postives = 57/71 (80.28%), Query Frame = 1
BLAST of MELO3C006062 vs. NCBI nr
Match: gi|567904800|ref|XP_006444888.1| (hypothetical protein CICLE_v10023364mg [Citrus clementina]) HSP 1 Score: 94.0 bits (232), Expect = 1.4e-16 Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |