MELO3C005802 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005802
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Mitochondrial import inner membrane translocase subunit
Location	chr9 : 23242293 .. 23246113 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGCCATAGACATCGCCGCCTGCCCTCTAACACAAAATCAGCTCTACGGCGCAGCGCAAACCAAATACTGAAAGCGGCTTTGGTTTATAGGGTTTTACAACCACCGAACAAATGGATTCGTTTTCATCCCCTTCAAGCGGTTCTTCTCCCCAATTTTCTGCCAATGAATTCAGGGATCAGCTCAAGACTCAGCTTGCTCAGGCCTATGCCGAGGAGTTTCTTGAGGTTTTACTTCTCCCTTAATTGTTCCTTTTCTTCCGGACTTGTTTGTTTAATTACTGATATCATGTGCGGATGTATCGTGTATGAATATCTGGACTTGTTAGAGTAGTCGGTTTGATGAATGCGTTTCACTATTGTGTGTTTTGAAGTTTGGGTAGGGATTGGAGCTCGCTTGTAAAGGTGATGCAAGAATTAATCAATGTGAATTGTTGAGTCTATAGATTTTGGAGTATTCTATCACAACATCAAGTTGAATCATTTAGGCTTCTTTTGATGACCATTTGGGGCTTTAGAATTGTGCTTGTTTTCTCAACCTTACAGATTTTCGTATTTCTAGCGAATCATTTGAACTTCAAATTCCACAAACCCAAAAAAAAAAAAGAACGAGTTTTTCAAAAGTGCTTTTTTTTTATTAGTTTTCATAACTCGACTTGAATTTTAAAAATCCAACTCATAAGTAGGAATAGTATATAAGTTTCATTTGCAAATTCCACAACTTAAATTCTCACTTGTCACTTCCAGTTCAAACTTCTTTTTCACTTCCTCATACTCATTTTAATGATTGAAGACGTAGAAATGTAAAATTTAGGTGTGGAAGTTCTTTACTGATCGAGTGCAGTAGATGAATAATACTTAATGTTATCTAACTTGTGTTGTAGGATTGATTGATAGATTTCTTTTCCTGTTGATTTTGAATGGGGAGAGGGAGGGCTAGAGGTTAATTAGGAGGAACAAATTTTCCGGAAGAAATCTCTTGAACCTTTAGGCTTTACCGATGGTTCTATAACATTATGTTATTGTCCATGTGTGGTAGATGACTCGTTCTTTGATTTATTCTTGCTCTAGCGTTCATGGTATGCATAAATCCTTCATAATGATTAGTACAGAGTCCAGACAATAATTTTACTTGGTCTCAGCATTGTTCTACCATATGATCTTTGGAGTTGTCCACACTAAAGATGCTGGGGAAGGAACGACATAAAGGTTCATTGTTCAGCCAATGGTCCTTCCAAAACAGTGTTTTTATTATCTTTGCCCACCTTTGTCTTGTACCAGTTATCAGAAAACTGAATGCACTCCAAAATATGGAGTCAAAGGGCCTTTTACTTGACTGGACCTTTCAACATGGTCGACCAGTCTTTCTCTTCCCACCTTTTTTGGAAGCGATCACCTTCCTCCACAAAGCCCTCTATTCAGTTGAGTATCTCCCATCCTAGTTGGCCAAGAGAGAGAGCCTAGTTCTAGTTGCTAATTCTCCAATGCTCAAACCTCCTATTAAAGAAGGGAGGGACATGAGTTCCCAATTTACGAAGCTGTTAATGGGGTGAGGTGCACTCAACGAAATAAATTTTGGACCAGGAAACTAATTTTTGGGGAAAAGTCTCTTCTTTTGGGGAAATTGTGTGGGTTATAGGCAAAATTTGAATCCAATTTGATTGCCTTATAATAAGTTGGTAGAGAATTCTCGAAGAAGGAAATCTAAAGGTTGAATAAGCCAGGAATGACTTGGAAAAAACGTTGAGAGAGAATCTCTTGTAAAAAATCTTTGAAGGTTTGAACTTCGGGAAAGATGGGGCAGCTTTGATGTTTGATCTACAACTTTATCCACCATACCATAGAGTATTCAATTAGGAAAGTCTTTCATCTGGTGTTCTCTTTCTGAACTTTTTTGTTCTTATAATCTTGTACATTCCCATAAAAAATTATGATCGTTTACAGTGTGGGTGTGTTGCCAACTTCAATTCCTTTTTTAAGCTTTTCCGTTAGGGACATCTCATCTCTCTCTCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTTATGGTTTCTCTCTATCTATATATTTCTCAATTTCAAAAAGGGTTAAAATCAAATTACATCTTTTTTTTCCTCTGTTGATTCTTAGACTTTATTTTTTGTGAATGAAATTTAGTAGCTTTGTTTATGGGATAGATCTCATGAGTTAGGACATTAAAGATATTGATATCAGTTATAATTTCCATGCTTCGTGTTTCTTTCAATTGTGCCGAGGGTTTTAGGGAAGAACTCTTTTGGAAATGTGTTGTGGTATTTGCTGGTTCCTTTACTTTGTTTGCCGTGTGCACCTTGTGTGTGCTTAGTAATATCAAACTTCTTGATAATAAGTTCCGTATATTGATATATAAAGTCCCAAAAGCCAGTTTCAAATTAAAATCTTGCATTTTTCTTGCACAGACCTTAAGAGTGAAGTGCTTTGACAAGTGTATCACAAAGCCAGGGTCAAGCTTAAGTGGAAGTGAGAGCAGTTGCATCTCTAGGTGCATGGAGCGTTATATTGAAGCAACCAGCATCGTCAGTAGAGCCCTCTTTAAGACACCACACTAAAAGAACAGGTTTTCCTAAGACATTATGAGGTCGAGGTATCTTCAGCACCCAACCTACATTATTTTTCTCGGTTAGATATTTGTTTTCCTGCTCTAAAATCTTTCTTGAGGAGACAAGTTTTTGATCTGTTCCCCATAGATAATATTGGTATCATGTGCTTTATTTGCTTACATGTGAACTTCGGGTCATTCAAACTCTCATTTCTTGTTATTTAACATGCTTCAATTGGGGTTCTTACCATTTGGGGGTTCGTGGTTCATCTATTAATGCAAACTGCTCAACCAAGCTATTTCAAAGGGGAGACCCAAAAGCAGCAAAATGCGATTACAAGAGATGAGAAGATTTCCAATTGGAACCTAAACAAGAAAAACTCAAATGTTTAAATGGTTGCTTAAATTTGCACCAATACAACGCAATAGAAAGAACCAGCTGCTAGTATTGGTTGGATAGAATAGAGAAGAGTGCTGGTGTGAAAATTGTACTGATAGTAAATTTCGTATAGTTGGAAGTATAGAGCAATGACACCTCTAGAGTTGGAAAATTTACGTTAAAACCGTAAATTATGAT

mRNA sequence

ATTGCCATAGACATCGCCGCCTGCCCTCTAACACAAAATCAGCTCTACGGCGCAGCGCAAACCAAATACTGAAAGCGGCTTTGGTTTATAGGGTTTTACAACCACCGAACAAATGGATTCGTTTTCATCCCCTTCAAGCGGTTCTTCTCCCCAATTTTCTGCCAATGAATTCAGGGATCAGCTCAAGACTCAGCTTGCTCAGGCCTATGCCGAGGAGTTTCTTGAGACCTTAAGAGTGAAGTGCTTTGACAAGTGTATCACAAAGCCAGGGTCAAGCTTAAGTGGAAGTGAGAGCAGTTGCATCTCTAGGTGCATGGAGCGTTATATTGAAGCAACCAGCATCGTCAGTAGAGCCCTCTTTAAGACACCACACTAAAAGAACAGGTTTTCCTAAGACATTATGAGGTCGAGCTATTTCAAAGGGGAGACCCAAAAGCAGCAAAATGCGATTACAAGAGATGAGAAGATTTCCAATTGGAACCTAAACAAGAAAAACTCAAATGTTTAAATGGTTGCTTAAATTTGCACCAATACAACGCAATAGAAAGAACCAGCTGCTAGTATTGGTTGGATAGAATAGAGAAGAGTGCTGGTGTGAAAATTGTACTGATAGTAAATTTCGTATAGTTGGAAGTATAGAGCAATGACACCTCTAGAGTTGGAAAATTTACGTTAAAACCGTAAATTATGAT

Coding sequence (CDS)

ATGGATTCGTTTTCATCCCCTTCAAGCGGTTCTTCTCCCCAATTTTCTGCCAATGAATTCAGGGATCAGCTCAAGACTCAGCTTGCTCAGGCCTATGCCGAGGAGTTTCTTGAGACCTTAAGAGTGAAGTGCTTTGACAAGTGTATCACAAAGCCAGGGTCAAGCTTAAGTGGAAGTGAGAGCAGTTGCATCTCTAGGTGCATGGAGCGTTATATTGAAGCAACCAGCATCGTCAGTAGAGCCCTCTTTAAGACACCACACTAA

Homology

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BLAST of MELO3C005802 vs. Swiss-Prot
Match: TIM13_ARATH (Mitochondrial import inner membrane translocase subunit TIM13 OS=Arabidopsis thaliana GN=TIM13 PE=1 SV=2)

HSP 1 Score: 119.4 bits (298), Expect = 2.0e-26
Identity = 58/84 (69.05%), Postives = 66/84 (78.57%), Query Frame = 1


Query: 1  MDSFSSPS-SGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGS 60
          MDS+SSP   GS    S     + +KTQLAQAYAEE +ETLR KCFDKC+TKPGSSL GS
Sbjct: 1  MDSYSSPPMGGSGSSVSPEVMMESVKTQLAQAYAEELIETLRTKCFDKCVTKPGSSLGGS 60

Query: 61 ESSCISRCMERYIEATSIVSRALF 84
          ESSCISRC+ERY+EAT+I+SR+LF
Sbjct: 61 ESSCISRCVERYMEATAIISRSLF 84

[Close]

BLAST of MELO3C005802 vs. Swiss-Prot
Match: TIM13_ORYSJ (Mitochondrial import inner membrane translocase subunit Tim13 OS=Oryza sativa subsp. japonica GN=TIM13 PE=3 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 3.4e-26
Identity = 63/85 (74.12%), Postives = 68/85 (80.00%), Query Frame = 1


Query: 1  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60
          MDSFSS SSGS P   A    DQ+K QLAQAYA+EFLET+  KCF KC+TKPGSSLSGSE
Sbjct: 1  MDSFSS-SSGSPPNTEA--LMDQIKAQLAQAYAQEFLETVGNKCFAKCVTKPGSSLSGSE 60

Query: 61 SSCISRCMERYIEATSIVSRALFKT 86
          SSCISRC++RYIEAT IVSRALF +
Sbjct: 61 SSCISRCVDRYIEATGIVSRALFSS 82

[Close]

BLAST of MELO3C005802 vs. Swiss-Prot
Match: TI13B_XENLA (Mitochondrial import inner membrane translocase subunit Tim13-B OS=Xenopus laevis GN=timm13-b PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.9e-13
Identity = 39/84 (46.43%), Postives = 50/84 (59.52%), Query Frame = 1


Query: 1  MDSFSSPSS---GSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLS 60
          MD F S  S    SS +       +Q+K Q+A A A+E L+ +  KCF KCI KPG SL 
Sbjct: 1  MDGFGSDFSVGGSSSGKVDTGAIMEQVKVQIAVANAQELLQRMTDKCFRKCIGKPGGSLD 60

Query: 61 GSESSCISRCMERYIEATSIVSRA 82
           SE  C++ CM+RY++A +IVSRA
Sbjct: 61 NSEQKCVAMCMDRYMDAWNIVSRA 84

[Close]

BLAST of MELO3C005802 vs. Swiss-Prot
Match: TIM13_DANRE (Mitochondrial import inner membrane translocase subunit Tim13 OS=Danio rerio GN=timm13 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 3.3e-13
Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = 1


Query: 1  MDSFSSP-SSGSSP-QFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSG 60
          M+ F S  SSGSS  +       +Q+K Q+A A A+E L+ +  KCF KCI KPGS+L  
Sbjct: 1  MEGFGSDFSSGSSSGKMDTGTIMEQVKVQIAVANAQELLQRMTDKCFKKCIGKPGSTLDN 60

Query: 61 SESSCISRCMERYIEATSIVSRA 82
          SE  CI+ CM+RY++A + VSRA
Sbjct: 61 SEQKCIAMCMDRYMDAWNTVSRA 83

[Close]

BLAST of MELO3C005802 vs. Swiss-Prot
Match: TI13A_XENLA (Mitochondrial import inner membrane translocase subunit Tim13-A OS=Xenopus laevis GN=timm13-a PE=3 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 3.6e-12
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 1


Query: 1  MDSFSSPSS---GSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLS 60
          M+ F S  S    S+ +       +Q+K Q+A A A+E L+ +  KCF KCI KPG SL 
Sbjct: 1  MEGFGSDFSVGGSSAGKVDTGAIMEQVKVQIAVANAQELLQRMTDKCFRKCIGKPGGSLD 60

Query: 61 GSESSCISRCMERYIEATSIVSRA 82
           SE  CI+ CM+RY++A + VSRA
Sbjct: 61 NSEQKCIAMCMDRYMDAWNTVSRA 84

[Close]

BLAST of MELO3C005802 vs. TrEMBL
Match: A0A0A0KK66_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G146860 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.6e-41
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1


Query: 1  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60
          MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCISRCMERYIEATSIVSRALFKTPH 88
          SSCISRCMERYIEATSIVSRALFKTPH
Sbjct: 61 SSCISRCMERYIEATSIVSRALFKTPH 87

[Close]

BLAST of MELO3C005802 vs. TrEMBL
Match: D7TVU9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g02990 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.9e-31
Identity = 71/88 (80.68%), Postives = 78/88 (88.64%), Query Frame = 1


Query: 1  MDSFS--SPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSG 60
          MDSFS  SPSSGSSPQ S  +F DQLKTQLAQAYAEEFLET+R KCF+KCITKPGSSLSG
Sbjct: 1  MDSFSTHSPSSGSSPQMSTEDFMDQLKTQLAQAYAEEFLETVRGKCFEKCITKPGSSLSG 60

Query: 61 SESSCISRCMERYIEATSIVSRALFKTP 87
          SESSCISRC++RYIEAT I+S+ALF  P
Sbjct: 61 SESSCISRCVDRYIEATGIISKALFSAP 88

[Close]

BLAST of MELO3C005802 vs. TrEMBL
Match: A0A058ZXS0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L00349 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 5.4e-31
Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 1


Query: 1  MDSFSSPSSGSSP-QFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGS 60
          MDSFSSPSSGSS  QFS  +F DQLKTQLAQAYAEEFLET+R KCF+KCITKPGSSLSGS
Sbjct: 1  MDSFSSPSSGSSSSQFSTEDFMDQLKTQLAQAYAEEFLETVRGKCFEKCITKPGSSLSGS 60

Query: 61 ESSCISRCMERYIEATSIVSRALF 84
          ESSCISRC+ERYIEAT I+SRA+F
Sbjct: 61 ESSCISRCVERYIEATGIISRAMF 84

[Close]

BLAST of MELO3C005802 vs. TrEMBL
Match: M5WNY9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014043mg PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.6e-30
Identity = 70/84 (83.33%), Postives = 76/84 (90.48%), Query Frame = 1


Query: 1  MDSFSSPSSGSSP-QFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGS 60
          MDSFSSPSSGSS  QF+ + F+DQLK QLAQAYAEEFLETLR KCFDKCITKPGSSL GS
Sbjct: 1  MDSFSSPSSGSSATQFNPDAFKDQLKNQLAQAYAEEFLETLRSKCFDKCITKPGSSLGGS 60

Query: 61 ESSCISRCMERYIEATSIVSRALF 84
          ESSCISRCM+RYIEAT I+S+ALF
Sbjct: 61 ESSCISRCMDRYIEATGIISKALF 84

[Close]

BLAST of MELO3C005802 vs. TrEMBL
Match: B9RYX8_RICCO (Mitochondrial import inner membrane translocase subunit Tim13, putative OS=Ricinus communis GN=RCOM_1314610 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 6.0e-30
Identity = 68/88 (77.27%), Postives = 77/88 (87.50%), Query Frame = 1


Query: 1  MDSFSSPSS-GSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGS 60
          MD+FSSPSS G+  Q S ++  DQ+KTQLAQAYA+EFLET+R KCFDKCITKPGSSLSGS
Sbjct: 1  MDTFSSPSSIGTGSQVSTSDLMDQVKTQLAQAYAQEFLETVRGKCFDKCITKPGSSLSGS 60

Query: 61 ESSCISRCMERYIEATSIVSRALFKTPH 88
          ESSCISRC++RYIEAT IVSRALF  PH
Sbjct: 61 ESSCISRCVDRYIEATGIVSRALFNAPH 88

[Close]

BLAST of MELO3C005802 vs. TAIR10
Match: AT1G61570.1 (AT1G61570.1 translocase of the inner mitochondrial membrane 13)

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-27
Identity = 58/84 (69.05%), Postives = 66/84 (78.57%), Query Frame = 1


Query: 1  MDSFSSPS-SGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGS 60
          MDS+SSP   GS    S     + +KTQLAQAYAEE +ETLR KCFDKC+TKPGSSL GS
Sbjct: 1  MDSYSSPPMGGSGSSVSPEVMMESVKTQLAQAYAEELIETLRTKCFDKCVTKPGSSLGGS 60

Query: 61 ESSCISRCMERYIEATSIVSRALF 84
          ESSCISRC+ERY+EAT+I+SR+LF
Sbjct: 61 ESSCISRCVERYMEATAIISRSLF 84

[Close]

BLAST of MELO3C005802 vs. TAIR10
Match: AT5G50810.1 (AT5G50810.1 translocase inner membrane subunit 8)

HSP 1 Score: 50.4 bits (119), Expect = 6.4e-07
Identity = 26/75 (34.67%), Postives = 39/75 (52.00%), Query Frame = 1


Query: 7  PSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITK-PGSSLSGSESSCIS 66
          PS  ++P     E    L  +  +A   E +  +   C+DKCIT  PGS  S SESSC++
Sbjct: 3  PSMANNP-----ELLQFLAQEKERAMVNEMVSKMTSVCWDKCITSAPGSKFSSSESSCLT 62

Query: 67 RCMERYIEATSIVSR 81
           C +RY++ + I+ +
Sbjct: 63 HCAQRYMDMSMIIMK 72

[Close]

BLAST of MELO3C005802 vs. NCBI nr
Match: gi|449456285|ref|XP_004145880.1| (PREDICTED: mitochondrial import inner membrane translocase subunit Tim13 [Cucumis sativus])

HSP 1 Score: 175.6 bits (444), Expect = 3.7e-41
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1


Query: 1  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60
          MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCISRCMERYIEATSIVSRALFKTPH 88
          SSCISRCMERYIEATSIVSRALFKTPH
Sbjct: 61 SSCISRCMERYIEATSIVSRALFKTPH 87

[Close]

BLAST of MELO3C005802 vs. NCBI nr
Match: gi|297742475|emb|CBI34624.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 142.9 bits (359), Expect = 2.7e-31
Identity = 71/88 (80.68%), Postives = 78/88 (88.64%), Query Frame = 1


Query: 1  MDSFS--SPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSG 60
          MDSFS  SPSSGSSPQ S  +F DQLKTQLAQAYAEEFLET+R KCF+KCITKPGSSLSG
Sbjct: 1  MDSFSTHSPSSGSSPQMSTEDFMDQLKTQLAQAYAEEFLETVRGKCFEKCITKPGSSLSG 60

Query: 61 SESSCISRCMERYIEATSIVSRALFKTP 87
          SESSCISRC++RYIEAT I+S+ALF  P
Sbjct: 61 SESSCISRCVDRYIEATGIISKALFSAP 88

[Close]

BLAST of MELO3C005802 vs. NCBI nr
Match: gi|731378986|ref|XP_002277915.2| (PREDICTED: LOW QUALITY PROTEIN: mitochondrial import inner membrane translocase subunit Tim13 [Vitis vinifera])

HSP 1 Score: 142.9 bits (359), Expect = 2.7e-31
Identity = 71/88 (80.68%), Postives = 78/88 (88.64%), Query Frame = 1


Query: 1  MDSFS--SPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSG 60
          MDSFS  SPSSGSSPQ S  +F DQLKTQLAQAYAEEFLET+R KCF+KCITKPGSSLSG
Sbjct: 1  MDSFSTHSPSSGSSPQMSTEDFMDQLKTQLAQAYAEEFLETVRGKCFEKCITKPGSSLSG 60

Query: 61 SESSCISRCMERYIEATSIVSRALFKTP 87
          SESSCISRC++RYIEAT I+S+ALF  P
Sbjct: 61 SESSCISRCVDRYIEATGIISKALFSAP 88

[Close]

BLAST of MELO3C005802 vs. NCBI nr
Match: gi|658063073|ref|XP_008367449.1| (PREDICTED: mitochondrial import inner membrane translocase subunit Tim13-like [Malus domestica])

HSP 1 Score: 142.5 bits (358), Expect = 3.5e-31
Identity = 67/87 (77.01%), Postives = 76/87 (87.36%), Query Frame = 1


Query: 1  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60
          MDSFSSPS GSS QF+ + F+DQLK QLAQAYAEEFLET+R KCFDKCITKPG+S+ GSE
Sbjct: 1  MDSFSSPSGGSSGQFNPDAFKDQLKNQLAQAYAEEFLETMRSKCFDKCITKPGTSIGGSE 60

Query: 61 SSCISRCMERYIEATSIVSRALFKTPH 88
          SSCISRCM+RYIEAT I+S+ALF   H
Sbjct: 61 SSCISRCMDRYIEATGIISKALFSASH 87

[Close]

BLAST of MELO3C005802 vs. NCBI nr
Match: gi|747048787|ref|XP_011070415.1| (PREDICTED: mitochondrial import inner membrane translocase subunit Tim13 [Sesamum indicum])

HSP 1 Score: 141.7 bits (356), Expect = 6.0e-31
Identity = 70/83 (84.34%), Postives = 75/83 (90.36%), Query Frame = 1


Query: 1  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60
          MDSFSSPSSGS  +FSA+E  DQLK QLAQAYAEEFLET+R KCFDKCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSPSKFSADELMDQLKLQLAQAYAEEFLETVRGKCFDKCITKPGSSLSGSE 60

Query: 61 SSCISRCMERYIEATSIVSRALF 84
          SSCISRC+ERYIEAT I+ RALF
Sbjct: 61 SSCISRCVERYIEATGIIGRALF 83

The following BLAST results are available for this feature:

BLAST of MELO3C005802 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TIM13_ARATH	2.0e-26	69.05	Mitochondrial import inner membrane translocase subunit TIM13 OS=Arabidopsis tha...	[more]
TIM13_ORYSJ	3.4e-26	74.12	Mitochondrial import inner membrane translocase subunit Tim13 OS=Oryza sativa su...	[more]
TI13B_XENLA	1.9e-13	46.43	Mitochondrial import inner membrane translocase subunit Tim13-B OS=Xenopus laevi...	[more]
TIM13_DANRE	3.3e-13	48.19	Mitochondrial import inner membrane translocase subunit Tim13 OS=Danio rerio GN=...	[more]
TI13A_XENLA	3.6e-12	44.05	Mitochondrial import inner membrane translocase subunit Tim13-A OS=Xenopus laevi...	[more]

BLAST of MELO3C005802 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK66_CUCSA	2.6e-41	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G146860 PE=3 SV=1	[more]
D7TVU9_VITVI	1.9e-31	80.68	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g02990 PE=3 SV=...	[more]
A0A058ZXS0_EUCGR	5.4e-31	84.52	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L00349 PE=3 SV=1	[more]
M5WNY9_PRUPE	1.6e-30	83.33	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014043mg PE=3 SV=1	[more]
B9RYX8_RICCO	6.0e-30	77.27	Mitochondrial import inner membrane translocase subunit Tim13, putative OS=Ricin...	[more]

BLAST of MELO3C005802 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G61570.1	1.1e-27	69.05	translocase of the inner mitochondrial membrane 13	[more]
AT5G50810.1	6.4e-07	34.67	translocase inner membrane subunit 8	[more]

BLAST of MELO3C005802 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456285\|ref\|XP_004145880.1\|	3.7e-41	100.00	PREDICTED: mitochondrial import inner membrane translocase subunit Tim13 [Cucumi...	[more]
gi\|297742475\|emb\|CBI34624.3\|	2.7e-31	80.68	unnamed protein product [Vitis vinifera]	[more]
gi\|731378986\|ref\|XP_002277915.2\|	2.7e-31	80.68	PREDICTED: LOW QUALITY PROTEIN: mitochondrial import inner membrane translocase ...	[more]
gi\|658063073\|ref\|XP_008367449.1\|	3.5e-31	77.01	PREDICTED: mitochondrial import inner membrane translocase subunit Tim13-like [M...	[more]
gi\|747048787\|ref\|XP_011070415.1\|	6.0e-31	84.34	PREDICTED: mitochondrial import inner membrane translocase subunit Tim13 [Sesamu...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004217	Tim10-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0001510	RNA methylation
biological_process	GO:0015031	protein transport
biological_process	GO:0008150	biological_process
biological_process	GO:0072321	chaperone-mediated protein transport
cellular_component	GO:0005758	mitochondrial intermembrane space
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU54206	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005802T2	MELO3C005802T2	mRNA
MELO3C005802T1	MELO3C005802T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU54206	MU54206	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005802	Csa5G146860	Cucumber (Chinese Long) v2	cumeB357
MELO3C005802	ClCG01G001340	Watermelon (Charleston Gray)	mewcgB018
MELO3C005802	Bhi12G000047	Wax gourd	mewgoB013
MELO3C005802	CSPI05G04090	Wild cucumber (PI 183967)	cpimeB348
MELO3C005802	Cucsa.193350	Cucumber (Gy14) v1	cgymeB350
MELO3C005802	CmaCh15G013340	Cucurbita maxima (Rimu)	cmameB250
MELO3C005802	CmaCh02G009530	Cucurbita maxima (Rimu)	cmameB526
MELO3C005802	CmoCh15G013960	Cucurbita moschata (Rifu)	cmomeB238
MELO3C005802	CmoCh02G009610	Cucurbita moschata (Rifu)	cmomeB516
MELO3C005802	Lsi09G001210	Bottle gourd (USVL1VR-Ls)	lsimeB012
MELO3C005802	Cp4.1LG00g00840	Cucurbita pepo (Zucchini)	cpemeB000
MELO3C005802	Cp4.1LG05g07510	Cucurbita pepo (Zucchini)	cpemeB650
MELO3C005802	CsGy5G001340	Cucumber (Gy14) v2	cgybmeB298
MELO3C005802	Carg21323	Silver-seed gourd	carmeB0364
MELO3C005802	CsaV3_5G001470	Cucumber (Chinese Long) v3	cucmeB357

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C005802	Watermelon (97103) v2	mewmbB008
MELO3C005802	Watermelon (97103) v2	mewmbB034
MELO3C005802	Melon (DHL92) v3.5.1	memeB022
MELO3C005802	Cucumber (Gy14) v1	cgymeB138
MELO3C005802	Wild cucumber (PI 183967)	cpimeB261
MELO3C005802	Watermelon (Charleston Gray)	mewcgB036
MELO3C005802	Watermelon (97103) v1	mewmB029
MELO3C005802	Cucumber (Gy14) v2	cgybmeB229
MELO3C005802	Silver-seed gourd	carmeB0706
MELO3C005802	Cucumber (Chinese Long) v3	cucmeB268