MELO3C005337.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C005337.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionNucleolar protein, putative
Locationchr09 : 20646439 .. 20646941 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTAATCTTTATTATCCATTTCTCTCTATCAGAAAAAAAAAAAAATGGATATCATTGCAACTTCATCAGCTCAAAACTTGAGGAGGCTATGGAGGAGAAGAACGTACCAAAGGTTACGAAGTGGCAGCAACGACACTGTCCCCACAAGATCATTGAGGAGCTTTCGGGTCGGAAGGATGATGATCATGAGACGACGAGCATCTCCTAAACTGCGGTTGAAAATGTCGTCGCCTTTGAAAGTTGTAGCGAAGATTCACGATGCGTATGTCGAGATGATGATGAGGTTGGCCAATAGTGTGGGGAATATGTATGCCATTGGAGGGTTTGGAAATAGGAAGAGGATACCAAAACCTCAAAATCAAGTTCCTCTTGGTGGAGAACAAATTGATGCTAAATTGGTATTGGAAATCTATAACAAACTTGCTTCTTCCAAGAACAGCTCTAATGCTAATATAAACTTATGATGATGTATAATTGTATATATAGTTTTGATTGAAATAAGG

mRNA sequence

TCTAATCTTTATTATCCATTTCTCTCTATCAGAAAAAAAAAAAAATGGATATCATTGCAACTTCATCAGCTCAAAACTTGAGGAGGCTATGGAGGAGAAGAACGTACCAAAGGTTACGAAGTGGCAGCAACGACACTGTCCCCACAAGATCATTGAGGAGCTTTCGGGTCGGAAGGATGATGATCATGAGACGACGAGCATCTCCTAAACTGCGGTTGAAAATGTCGTCGCCTTTGAAAGTTGTAGCGAAGATTCACGATGCGTATGTCGAGATGATGATGAGGTTGGCCAATAGTGTGGGGAATATGTATGCCATTGGAGGGTTTGGAAATAGGAAGAGGATACCAAAACCTCAAAATCAAGTTCCTCTTGGTGGAGAACAAATTGATGCTAAATTGGTATTGGAAATCTATAACAAACTTGCTTCTTCCAAGAACAGCTCTAATGCTAATATAAACTTATGATGATGTATAATTGTATATATAGTTTTGATTGAAATAAGG

Coding sequence (CDS)

ATGGATATCATTGCAACTTCATCAGCTCAAAACTTGAGGAGGCTATGGAGGAGAAGAACGTACCAAAGGTTACGAAGTGGCAGCAACGACACTGTCCCCACAAGATCATTGAGGAGCTTTCGGGTCGGAAGGATGATGATCATGAGACGACGAGCATCTCCTAAACTGCGGTTGAAAATGTCGTCGCCTTTGAAAGTTGTAGCGAAGATTCACGATGCGTATGTCGAGATGATGATGAGGTTGGCCAATAGTGTGGGGAATATGTATGCCATTGGAGGGTTTGGAAATAGGAAGAGGATACCAAAACCTCAAAATCAAGTTCCTCTTGGTGGAGAACAAATTGATGCTAAATTGGTATTGGAAATCTATAACAAACTTGCTTCTTCCAAGAACAGCTCTAATGCTAATATAAACTTATGA

Protein sequence

MDIIATSSAQNLRRLWRRRTYQRLRSGSNDTVPTRSLRSFRVGRMMIMRRRASPKLRLKMSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLVLEIYNKLASSKNSSNANINL
BLAST of MELO3C005337.2 vs. NCBI nr
Match: XP_008467181.1 (PREDICTED: uncharacterized protein LOC103504591 [Cucumis melo])

HSP 1 Score: 266.2 bits (679), Expect = 6.4e-68
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0

Query: 1   MDIIATSSAQNLRRLWRRRTYQRLRSGSNDTVPTRSLRSFRVGRMMIMRRRASPKLRLKM 60
           MDIIATSSAQNLRRLWRRRTYQRLRSGSNDTVPTRSLRSFRVGRMMIMRRRASPKLRLKM
Sbjct: 1   MDIIATSSAQNLRRLWRRRTYQRLRSGSNDTVPTRSLRSFRVGRMMIMRRRASPKLRLKM 60

Query: 61  SSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLVL 120
           SSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLVL
Sbjct: 61  SSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLVL 120

Query: 121 EIYNKLASSKNSSNANINL 140
           EIYNKLASSKNSSNANINL
Sbjct: 121 EIYNKLASSKNSSNANINL 139

BLAST of MELO3C005337.2 vs. NCBI nr
Match: XP_011656247.1 (PREDICTED: uncharacterized protein LOC105435696 [Cucumis sativus] >KGN51531.1 hypothetical protein Csa_5G576730 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 5.8e-61
Identity = 129/140 (92.14%), Postives = 133/140 (95.00%), Query Frame = 0

Query: 1   MDIIATSSAQNLRRLWRRRTYQRLRSGSN-DTVPTRSLRSFRVGRMMIMRRRASPKLRLK 60
           MDIIATSSAQNLRRLWRRR YQRL SG+N  TV TRS RSFRVGRMMIMRRR SPK+RLK
Sbjct: 1   MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRRRVSPKIRLK 60

Query: 61  MSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLV 120
           +SSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLV
Sbjct: 61  VSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLV 120

Query: 121 LEIYNKLASSKNSSNANINL 140
           LEIYNKLA+SKNSSNANINL
Sbjct: 121 LEIYNKLAASKNSSNANINL 140

BLAST of MELO3C005337.2 vs. NCBI nr
Match: XP_022993314.1 (uncharacterized protein LOC111489358 [Cucurbita maxima])

HSP 1 Score: 167.5 bits (423), Expect = 3.1e-38
Identity = 97/138 (70.29%), Postives = 111/138 (80.43%), Query Frame = 0

Query: 1   MDIIATSSAQNLRRLWRRRTYQRLRSGSNDTVPTRSLRSFRVGRMMIMRRRASPKLRLKM 60
           MDIIAT SA +L+RLWRRR YQRL SG   T   RS RSFR+GR+  +RRRA PKLRLKM
Sbjct: 1   MDIIATPSALSLKRLWRRRRYQRLGSG---TGAARS-RSFRLGRLWRIRRRA-PKLRLKM 60

Query: 61  SSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPL---GGEQIDAK 120
            SP K +A+ HDAYV+MMMR+ANSVG+MYAIGG+GN KRIPKP NQV L   GGEQ+D K
Sbjct: 61  VSPFKALARFHDAYVKMMMRVANSVGSMYAIGGYGNGKRIPKPSNQVSLVSCGGEQVDTK 120

Query: 121 LVLEIYNKLASSKNSSNA 136
           LVLE+YNKLA+SKN S A
Sbjct: 121 LVLEMYNKLAASKNLSVA 133

BLAST of MELO3C005337.2 vs. NCBI nr
Match: XP_022939174.1 (uncharacterized protein LOC111445168 [Cucurbita moschata])

HSP 1 Score: 167.2 bits (422), Expect = 4.1e-38
Identity = 97/138 (70.29%), Postives = 110/138 (79.71%), Query Frame = 0

Query: 1   MDIIATSSAQNLRRLWRRRTYQRLRSGSNDTVPTRSLRSFRVGRMMIMRRRASPKLRLKM 60
           MDIIAT SA +L+RLWRRR YQRL SG   T   RS RSF +GR+  MRRRA PKLRLKM
Sbjct: 1   MDIIATPSALSLKRLWRRRRYQRLGSG---TGAARS-RSFHLGRLWRMRRRA-PKLRLKM 60

Query: 61  SSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPL---GGEQIDAK 120
           + P K +A+ HDAYV+MM R+AN VGNMYAIGGFGN KRIPKP+NQV L   GGEQ+DAK
Sbjct: 61  ALPFKALARFHDAYVKMMTRVANKVGNMYAIGGFGNGKRIPKPRNQVSLVSCGGEQVDAK 120

Query: 121 LVLEIYNKLASSKNSSNA 136
           LVLE+YNKLA+SKN S A
Sbjct: 121 LVLEMYNKLAASKNLSVA 133

BLAST of MELO3C005337.2 vs. NCBI nr
Match: XP_023550637.1 (uncharacterized protein LOC111808720 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.8 bits (421), Expect = 5.3e-38
Identity = 97/134 (72.39%), Postives = 110/134 (82.09%), Query Frame = 0

Query: 1   MDIIATSSAQNLRRLWRRRTYQRLRSGSNDTVPTRSLRSFRVGRMMIMRRRASPKLRLKM 60
           MDIIAT SA +L+RLWRRR YQRL SG   T   RS RSF +GR+  MRRRA PKLRLKM
Sbjct: 1   MDIIATPSALSLKRLWRRRRYQRLGSG---TGAPRS-RSFHLGRLWRMRRRA-PKLRLKM 60

Query: 61  SSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPL---GGEQIDAK 120
           +SPLKV+A+ HDAYV+MM R+AN+VGNMYAIGGFGN KRIPK  NQV L   GGEQ+DAK
Sbjct: 61  ASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKLGNQVSLVYCGGEQVDAK 120

Query: 121 LVLEIYNKLASSKN 132
           LVLE+YNKLA+SKN
Sbjct: 121 LVLEMYNKLAASKN 129

BLAST of MELO3C005337.2 vs. TAIR10
Match: AT2G47485.1 (unknown protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06
Identity = 42/127 (33.07%), Postives = 64/127 (50.39%), Query Frame = 0

Query: 14  RLWRR-RTYQRL----RSGSNDTVPTRSLRSFRVGRMMIMRRRASPKLR-LKMSSPLKVV 73
           R WRR R YQRL    +  S+     + ++     +    R +  PKLR LK +SP K++
Sbjct: 4   RYWRRLRGYQRLDGSAKKASSGRRNVKRVKMDPTRKRRFWRIKIVPKLRILKKASPKKLL 63

Query: 74  AKIHDAYVEMMMRLANS--VGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLVLEIYNK 133
             + DAYV MM+RLANS  VG+ Y  G +G             L  ++ D K ++EIY  
Sbjct: 64  TWLRDAYVNMMLRLANSRVVGSSYGYGEYGYGS---------GLASKEYDEKKLVEIYKS 121

BLAST of MELO3C005337.2 vs. TAIR10
Match: AT3G62650.2 (unknown protein)

HSP 1 Score: 47.8 bits (112), Expect = 6.5e-06
Identity = 43/130 (33.08%), Postives = 66/130 (50.77%), Query Frame = 0

Query: 13  RRLWRR-RTYQRLRSGSNDTVPTRSLRSFRVG---RMMIMRRRASPKLR-LKMSSPLKVV 72
           +R WRR R Y++L   S  T   R  +  ++    +    R +  PKLR LK +SP K +
Sbjct: 6   KRYWRRWRGYEKLDGSSETTSGRRKGKRVKMDPTRKKRFWRIKIVPKLRILKTASPKKFL 65

Query: 73  AKIHDAYVEMMMRLANS--VGNM-YAIGGFGNRKRIPKPQNQVPLGGEQIDAKLVLEIYN 132
             + D+YV+MMMRLANS  VG+  Y   GFG+ +             ++ D K+++EIY 
Sbjct: 66  VWLRDSYVKMMMRLANSRVVGSSGYGGSGFGSGQM------------KEYDEKMLVEIYK 123

Query: 133 KLASSKNSSN 135
            +   +   N
Sbjct: 126 SILMVQAQGN 123

BLAST of MELO3C005337.2 vs. TrEMBL
Match: tr|A0A1S3CSX3|A0A1S3CSX3_CUCME (uncharacterized protein LOC103504591 OS=Cucumis melo OX=3656 GN=LOC103504591 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 4.3e-68
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0

Query: 1   MDIIATSSAQNLRRLWRRRTYQRLRSGSNDTVPTRSLRSFRVGRMMIMRRRASPKLRLKM 60
           MDIIATSSAQNLRRLWRRRTYQRLRSGSNDTVPTRSLRSFRVGRMMIMRRRASPKLRLKM
Sbjct: 1   MDIIATSSAQNLRRLWRRRTYQRLRSGSNDTVPTRSLRSFRVGRMMIMRRRASPKLRLKM 60

Query: 61  SSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLVL 120
           SSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLVL
Sbjct: 61  SSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLVL 120

Query: 121 EIYNKLASSKNSSNANINL 140
           EIYNKLASSKNSSNANINL
Sbjct: 121 EIYNKLASSKNSSNANINL 139

BLAST of MELO3C005337.2 vs. TrEMBL
Match: tr|A0A0A0KV01|A0A0A0KV01_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576730 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 3.9e-61
Identity = 129/140 (92.14%), Postives = 133/140 (95.00%), Query Frame = 0

Query: 1   MDIIATSSAQNLRRLWRRRTYQRLRSGSN-DTVPTRSLRSFRVGRMMIMRRRASPKLRLK 60
           MDIIATSSAQNLRRLWRRR YQRL SG+N  TV TRS RSFRVGRMMIMRRR SPK+RLK
Sbjct: 1   MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRRRVSPKIRLK 60

Query: 61  MSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLV 120
           +SSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLV
Sbjct: 61  VSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLV 120

Query: 121 LEIYNKLASSKNSSNANINL 140
           LEIYNKLA+SKNSSNANINL
Sbjct: 121 LEIYNKLAASKNSSNANINL 140

BLAST of MELO3C005337.2 vs. TrEMBL
Match: tr|A0A2K1YSR5|A0A2K1YSR5_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G119200v3 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.8e-17
Identity = 51/134 (38.06%), Postives = 87/134 (64.93%), Query Frame = 0

Query: 1   MDIIATSSAQNLRRLWRRRTYQRLRSGSNDTVPTRSLRSFRVGRMMIMRRRASPKLRLKM 60
           M+II+++  +N++R WRR  YQRL   S      R L+  R+G     + RA PKL +++
Sbjct: 1   MEIISSACYENVKRYWRRNRYQRLNGASK-----RKLKIARLGSGRRWKLRAVPKLHMEI 60

Query: 61  SSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLVL 120
           +SP+K++ K HDAY++MM+RLA ++G++   G F  +K        +   G+++D++L+L
Sbjct: 61  ASPIKLLEKFHDAYIDMMLRLATNIGSLNNKGFFRGKKVAKDQHISMVSSGDEVDSRLLL 120

Query: 121 EIYNKLASSKNSSN 135
           EIY KLA+S++ S+
Sbjct: 121 EIYKKLAASRDISD 129

BLAST of MELO3C005337.2 vs. TrEMBL
Match: tr|M5Y361|M5Y361_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G317600 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.2e-16
Identity = 58/133 (43.61%), Postives = 81/133 (60.90%), Query Frame = 0

Query: 1   MDIIATSSAQNLRRLWRRRTYQRLRSGSNDTVPTRSLRSFRVGRMMIMRRRASPKLRL-K 60
           M+I   +   NL+R WRRR YQRL   +   +    L   +  R +   R A PKLRL K
Sbjct: 1   MEIAPVAYYDNLKRYWRRRRYQRLNGDTKKKMRVTRLGGAKTTRRIWKLRSAMPKLRLMK 60

Query: 61  MSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLG--GEQIDAK 120
             SPLK++ K HDAYV+MM R+A   GN  +IGG    K++ K Q+Q+ +   GE++D +
Sbjct: 61  FVSPLKLLTKFHDAYVDMMYRMA---GNAASIGGVSG-KKVAKAQDQISIASCGEEVDGR 120

Query: 121 LVLEIYNKLASSK 131
           LVLEIY +LA+S+
Sbjct: 121 LVLEIYKRLAASR 129

BLAST of MELO3C005337.2 vs. TrEMBL
Match: tr|B9SJX2|B9SJX2_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0577330 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.9e-16
Identity = 52/134 (38.81%), Postives = 83/134 (61.94%), Query Frame = 0

Query: 1   MDIIATSSAQNLRRLWRRRTYQRLRSGSNDTVPTRSLRSFRVG----RMMIMRRRASPKL 60
           M++I+++    L+R WRRR YQRL   +N     R L+  R+G    R +   R  +PKL
Sbjct: 1   MEMISSACYDTLKRCWRRRRYQRLHCSTNS---KRKLKIIRLGGAATRRIWKLRTTAPKL 60

Query: 61  RLKMSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDA 120
           + K+ SP++++   HDAYV+MM+RLAN++G +   G FG +K     Q  +   GE++D 
Sbjct: 61  QWKLLSPVRILVNFHDAYVDMMIRLANNMGKLNGRGVFGRKKFAKDKQISMVSCGEEVDT 120

Query: 121 KLVLEIYNKLASSK 131
           +LVLEIY +L +++
Sbjct: 121 RLVLEIYKRLVAAR 131

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008467181.16.4e-68100.00PREDICTED: uncharacterized protein LOC103504591 [Cucumis melo][more]
XP_011656247.15.8e-6192.14PREDICTED: uncharacterized protein LOC105435696 [Cucumis sativus] >KGN51531.1 hy... [more]
XP_022993314.13.1e-3870.29uncharacterized protein LOC111489358 [Cucurbita maxima][more]
XP_022939174.14.1e-3870.29uncharacterized protein LOC111445168 [Cucurbita moschata][more]
XP_023550637.15.3e-3872.39uncharacterized protein LOC111808720 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT2G47485.11.7e-0633.07unknown protein[more]
AT3G62650.26.5e-0633.08unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3CSX3|A0A1S3CSX3_CUCME4.3e-68100.00uncharacterized protein LOC103504591 OS=Cucumis melo OX=3656 GN=LOC103504591 PE=... [more]
tr|A0A0A0KV01|A0A0A0KV01_CUCSA3.9e-6192.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576730 PE=4 SV=1[more]
tr|A0A2K1YSR5|A0A2K1YSR5_POPTR5.8e-1738.06Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G119200v3 PE=... [more]
tr|M5Y361|M5Y361_PRUPE2.2e-1643.61Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G317600 PE=4 SV=1[more]
tr|B9SJX2|B9SJX2_RICCO2.9e-1638.81Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0577330 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005337.2.1MELO3C005337.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33702:SF2SUBFAMILY NOT NAMEDcoord: 1..134
NoneNo IPR availablePANTHERPTHR33702FAMILY NOT NAMEDcoord: 1..134

The following gene(s) are paralogous to this gene:

None