CsGy5G019440 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATATCATTGCAACTTCATCAGCTCAAAACTTGAGGAGGCTATGGAGAAGAAGAGCATACCAAAGGTTAGGAAGTGGCAACAACATGAGTACTGTCACCACAAGATCATCAAGGAGCTTTCGGGTCGGTCGGATGATGATCATGAGACGACGAGTATCTCCTAAAATACGGTTGAAAGTGTCGTCGCCGTTGAAAGTTGTAGCAAAGATTCACGATGCGTATGTCGAGATGATGATGAGGTTGGCCAATAGTGTGGGGAATATGTATGCCATTGGAGGGTTTGGAAATAGGAAGAGGATACCAAAACCTCAAAATCAAGTTCCTCTTGGTGGAGAACAAATTGATGCTAAATTGGTATTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACAGCTCTAATGCTAACATAAACTTATGA ATGGATATCATTGCAACTTCATCAGCTCAAAACTTGAGGAGGCTATGGAGAAGAAGAGCATACCAAAGGTTAGGAAGTGGCAACAACATGAGTACTGTCACCACAAGATCATCAAGGAGCTTTCGGGTCGGTCGGATGATGATCATGAGACGACGAGTATCTCCTAAAATACGGTTGAAAGTGTCGTCGCCGTTGAAAGTTGTAGCAAAGATTCACGATGCGTATGTCGAGATGATGATGAGGTTGGCCAATAGTGTGGGGAATATGTATGCCATTGGAGGGTTTGGAAATAGGAAGAGGATACCAAAACCTCAAAATCAAGTTCCTCTTGGTGGAGAACAAATTGATGCTAAATTGGTATTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACAGCTCTAATGCTAACATAAACTTATGA ATGGATATCATTGCAACTTCATCAGCTCAAAACTTGAGGAGGCTATGGAGAAGAAGAGCATACCAAAGGTTAGGAAGTGGCAACAACATGAGTACTGTCACCACAAGATCATCAAGGAGCTTTCGGGTCGGTCGGATGATGATCATGAGACGACGAGTATCTCCTAAAATACGGTTGAAAGTGTCGTCGCCGTTGAAAGTTGTAGCAAAGATTCACGATGCGTATGTCGAGATGATGATGAGGTTGGCCAATAGTGTGGGGAATATGTATGCCATTGGAGGGTTTGGAAATAGGAAGAGGATACCAAAACCTCAAAATCAAGTTCCTCTTGGTGGAGAACAAATTGATGCTAAATTGGTATTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACAGCTCTAATGCTAACATAAACTTATGA MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRRRVSPKIRLKVSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLVLEIYNKLAASKNSSNANINL
BLAST of CsGy5G019440 vs. NCBI nr
Match: XP_011656247.1 (PREDICTED: uncharacterized protein LOC105435696 [Cucumis sativus] >KGN51531.1 hypothetical protein Csa_5G576730 [Cucumis sativus]) HSP 1 Score: 266.5 bits (680), Expect = 5.0e-68 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of CsGy5G019440 vs. NCBI nr
Match: XP_008467181.1 (PREDICTED: uncharacterized protein LOC103504591 [Cucumis melo]) HSP 1 Score: 242.7 bits (618), Expect = 7.7e-61 Identity = 129/140 (92.14%), Postives = 133/140 (95.00%), Query Frame = 0
BLAST of CsGy5G019440 vs. NCBI nr
Match: XP_022993314.1 (uncharacterized protein LOC111489358 [Cucurbita maxima]) HSP 1 Score: 169.5 bits (428), Expect = 8.2e-39 Identity = 94/139 (67.63%), Postives = 111/139 (79.86%), Query Frame = 0
BLAST of CsGy5G019440 vs. NCBI nr
Match: XP_022939174.1 (uncharacterized protein LOC111445168 [Cucurbita moschata]) HSP 1 Score: 169.1 bits (427), Expect = 1.1e-38 Identity = 94/139 (67.63%), Postives = 110/139 (79.14%), Query Frame = 0
BLAST of CsGy5G019440 vs. NCBI nr
Match: XP_023550637.1 (uncharacterized protein LOC111808720 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 168.3 bits (425), Expect = 1.8e-38 Identity = 94/135 (69.63%), Postives = 109/135 (80.74%), Query Frame = 0
BLAST of CsGy5G019440 vs. TAIR10
Match: AT2G47485.1 (unknown protein) HSP 1 Score: 52.0 bits (123), Expect = 3.5e-07 Identity = 41/127 (32.28%), Postives = 66/127 (51.97%), Query Frame = 0
BLAST of CsGy5G019440 vs. TAIR10
Match: AT3G62650.2 (unknown protein) HSP 1 Score: 48.5 bits (114), Expect = 3.8e-06 Identity = 42/131 (32.06%), Postives = 70/131 (53.44%), Query Frame = 0
BLAST of CsGy5G019440 vs. TrEMBL
Match: tr|A0A0A0KV01|A0A0A0KV01_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576730 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 3.3e-68 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of CsGy5G019440 vs. TrEMBL
Match: tr|A0A1S3CSX3|A0A1S3CSX3_CUCME (uncharacterized protein LOC103504591 OS=Cucumis melo OX=3656 GN=LOC103504591 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 5.1e-61 Identity = 129/140 (92.14%), Postives = 133/140 (95.00%), Query Frame = 0
BLAST of CsGy5G019440 vs. TrEMBL
Match: tr|A0A2I4GFT4|A0A2I4GFT4_9ROSI (uncharacterized protein LOC109007525 OS=Juglans regia OX=51240 GN=LOC109007525 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.2e-16 Identity = 57/134 (42.54%), Postives = 87/134 (64.93%), Query Frame = 0
BLAST of CsGy5G019440 vs. TrEMBL
Match: tr|A0A061E4X4|A0A061E4X4_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_009397 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.8e-16 Identity = 59/137 (43.07%), Postives = 81/137 (59.12%), Query Frame = 0
BLAST of CsGy5G019440 vs. TrEMBL
Match: tr|A0A2K1YSR5|A0A2K1YSR5_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G119200v3 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 5.0e-16 Identity = 50/138 (36.23%), Postives = 86/138 (62.32%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |