Cp4.1LG01g18150 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATATCATTGCAACCCCATCAGCTCAAGGCATGAGGAGGCTATGGAGAAGAAGAGGATACCAAAAGCTAGGAAGTGATACTCGCACTACAAGATCAAGGAGCTTCAGGCTTCGGCGACTATGGCGTTTGAGACGACAAGCTTCAAAGGTGCAGTTGAAAATAATGTCACCTTTGAAACTTTTGGCGAAGTTTCACGACACGTATGTCGAGATGATGATGAAGGTAGCGAATAGTGTGGGGAATATATATGCCATTGGAGCTTTTGGCAATGGGAAGAGGATACCAAAACCTCGTAATCAAGTTTCTCTTGCTACTTGTGATGGTGAACATGTTGATGCCAAGTTCGTCTTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACTTGGCTAATGGTTTTTGA ATGGATATCATTGCAACCCCATCAGCTCAAGGCATGAGGAGGCTATGGAGAAGAAGAGGATACCAAAAGCTAGGAAGTGATACTCGCACTACAAGATCAAGGAGCTTCAGGCTTCGGCGACTATGGCGTTTGAGACGACAAGCTTCAAAGGTGCAGTTGAAAATAATGTCACCTTTGAAACTTTTGGCGAAGTTTCACGACACGTATGTCGAGATGATGATGAAGGTAGCGAATAGTGTGGGGAATATATATGCCATTGGAGCTTTTGGCAATGGGAAGAGGATACCAAAACCTCGTAATCAAGTTTCTCTTGCTACTTGTGATGGTGAACATGTTGATGCCAAGTTCGTCTTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACTTGGCTAATGGTTTTTGA ATGGATATCATTGCAACCCCATCAGCTCAAGGCATGAGGAGGCTATGGAGAAGAAGAGGATACCAAAAGCTAGGAAGTGATACTCGCACTACAAGATCAAGGAGCTTCAGGCTTCGGCGACTATGGCGTTTGAGACGACAAGCTTCAAAGGTGCAGTTGAAAATAATGTCACCTTTGAAACTTTTGGCGAAGTTTCACGACACGTATGTCGAGATGATGATGAAGGTAGCGAATAGTGTGGGGAATATATATGCCATTGGAGCTTTTGGCAATGGGAAGAGGATACCAAAACCTCGTAATCAAGTTTCTCTTGCTACTTGTGATGGTGAACATGTTGATGCCAAGTTCGTCTTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACTTGGCTAATGGTTTTTGA MDIIATPSAQGMRRLWRRRGYQKLGSDTRTTRSRSFRLRRLWRLRRQASKVQLKIMSPLKLLAKFHDTYVEMMMKVANSVGNIYAIGAFGNGKRIPKPRNQVSLATCDGEHVDAKFVLEIYNKLAASKNLANGF
BLAST of Cp4.1LG01g18150 vs. TrEMBL
Match: A0A0A0KV01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576730 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 1.1e-38 Identity = 93/138 (67.39%), Postives = 110/138 (79.71%), Query Frame = 1
BLAST of Cp4.1LG01g18150 vs. TrEMBL
Match: M5Y1B9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017730mg PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 5.9e-21 Identity = 64/139 (46.04%), Postives = 92/139 (66.19%), Query Frame = 1
BLAST of Cp4.1LG01g18150 vs. TrEMBL
Match: M5Y361_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013192mg PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.5e-19 Identity = 63/137 (45.99%), Postives = 89/137 (64.96%), Query Frame = 1
BLAST of Cp4.1LG01g18150 vs. TrEMBL
Match: B9SJX2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0577330 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 3.3e-19 Identity = 56/136 (41.18%), Postives = 89/136 (65.44%), Query Frame = 1
BLAST of Cp4.1LG01g18150 vs. TrEMBL
Match: B9HWC5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12920g PE=4 SV=2) HSP 1 Score: 94.4 bits (233), Expect = 1.2e-16 Identity = 53/135 (39.26%), Postives = 89/135 (65.93%), Query Frame = 1
BLAST of Cp4.1LG01g18150 vs. TAIR10
Match: AT2G47485.1 (AT2G47485.1 unknown protein) HSP 1 Score: 51.6 bits (122), Expect = 4.4e-07 Identity = 47/133 (35.34%), Postives = 62/133 (46.62%), Query Frame = 1
BLAST of Cp4.1LG01g18150 vs. TAIR10
Match: AT3G62650.2 (AT3G62650.2 unknown protein) HSP 1 Score: 50.4 bits (119), Expect = 9.7e-07 Identity = 42/125 (33.60%), Postives = 59/125 (47.20%), Query Frame = 1
BLAST of Cp4.1LG01g18150 vs. NCBI nr
Match: gi|778708618|ref|XP_011656247.1| (PREDICTED: uncharacterized protein LOC105435696 [Cucumis sativus]) HSP 1 Score: 167.5 bits (423), Expect = 1.5e-38 Identity = 93/138 (67.39%), Postives = 110/138 (79.71%), Query Frame = 1
BLAST of Cp4.1LG01g18150 vs. NCBI nr
Match: gi|659072948|ref|XP_008467181.1| (PREDICTED: uncharacterized protein LOC103504591 [Cucumis melo]) HSP 1 Score: 162.9 bits (411), Expect = 3.8e-37 Identity = 92/137 (67.15%), Postives = 110/137 (80.29%), Query Frame = 1
BLAST of Cp4.1LG01g18150 vs. NCBI nr
Match: gi|596294338|ref|XP_007226819.1| (hypothetical protein PRUPE_ppa017730mg [Prunus persica]) HSP 1 Score: 108.6 bits (270), Expect = 8.5e-21 Identity = 64/139 (46.04%), Postives = 92/139 (66.19%), Query Frame = 1
BLAST of Cp4.1LG01g18150 vs. NCBI nr
Match: gi|645276452|ref|XP_008243296.1| (PREDICTED: uncharacterized protein LOC103341531 [Prunus mume]) HSP 1 Score: 107.5 bits (267), Expect = 1.9e-20 Identity = 63/140 (45.00%), Postives = 92/140 (65.71%), Query Frame = 1
BLAST of Cp4.1LG01g18150 vs. NCBI nr
Match: gi|596298842|ref|XP_007227559.1| (hypothetical protein PRUPE_ppa013192mg [Prunus persica]) HSP 1 Score: 104.0 bits (258), Expect = 2.1e-19 Identity = 63/137 (45.99%), Postives = 89/137 (64.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |