Cp4.1LG01g18150 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g18150
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG01 : 14973622 .. 14974026 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATCATTGCAACCCCATCAGCTCAAGGCATGAGGAGGCTATGGAGAAGAAGAGGATACCAAAAGCTAGGAAGTGATACTCGCACTACAAGATCAAGGAGCTTCAGGCTTCGGCGACTATGGCGTTTGAGACGACAAGCTTCAAAGGTGCAGTTGAAAATAATGTCACCTTTGAAACTTTTGGCGAAGTTTCACGACACGTATGTCGAGATGATGATGAAGGTAGCGAATAGTGTGGGGAATATATATGCCATTGGAGCTTTTGGCAATGGGAAGAGGATACCAAAACCTCGTAATCAAGTTTCTCTTGCTACTTGTGATGGTGAACATGTTGATGCCAAGTTCGTCTTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACTTGGCTAATGGTTTTTGA

mRNA sequence

ATGGATATCATTGCAACCCCATCAGCTCAAGGCATGAGGAGGCTATGGAGAAGAAGAGGATACCAAAAGCTAGGAAGTGATACTCGCACTACAAGATCAAGGAGCTTCAGGCTTCGGCGACTATGGCGTTTGAGACGACAAGCTTCAAAGGTGCAGTTGAAAATAATGTCACCTTTGAAACTTTTGGCGAAGTTTCACGACACGTATGTCGAGATGATGATGAAGGTAGCGAATAGTGTGGGGAATATATATGCCATTGGAGCTTTTGGCAATGGGAAGAGGATACCAAAACCTCGTAATCAAGTTTCTCTTGCTACTTGTGATGGTGAACATGTTGATGCCAAGTTCGTCTTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACTTGGCTAATGGTTTTTGA

Coding sequence (CDS)

ATGGATATCATTGCAACCCCATCAGCTCAAGGCATGAGGAGGCTATGGAGAAGAAGAGGATACCAAAAGCTAGGAAGTGATACTCGCACTACAAGATCAAGGAGCTTCAGGCTTCGGCGACTATGGCGTTTGAGACGACAAGCTTCAAAGGTGCAGTTGAAAATAATGTCACCTTTGAAACTTTTGGCGAAGTTTCACGACACGTATGTCGAGATGATGATGAAGGTAGCGAATAGTGTGGGGAATATATATGCCATTGGAGCTTTTGGCAATGGGAAGAGGATACCAAAACCTCGTAATCAAGTTTCTCTTGCTACTTGTGATGGTGAACATGTTGATGCCAAGTTCGTCTTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACTTGGCTAATGGTTTTTGA

Protein sequence

MDIIATPSAQGMRRLWRRRGYQKLGSDTRTTRSRSFRLRRLWRLRRQASKVQLKIMSPLKLLAKFHDTYVEMMMKVANSVGNIYAIGAFGNGKRIPKPRNQVSLATCDGEHVDAKFVLEIYNKLAASKNLANGF
BLAST of Cp4.1LG01g18150 vs. TrEMBL
Match: A0A0A0KV01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576730 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-38
Identity = 93/138 (67.39%), Postives = 110/138 (79.71%), Query Frame = 1

Query: 1   MDIIATPSAQGMRRLWRRRGYQKLGS----DTRTTRS-RSFRLRRLWRLRRQAS-KVQLK 60
           MDIIAT SAQ +RRLWRRR YQ+LGS     T TTRS RSFR+ R+  +RR+ S K++LK
Sbjct: 1   MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRRRVSPKIRLK 60

Query: 61  IMSPLKLLAKFHDTYVEMMMKVANSVGNIYAIGAFGNGKRIPKPRNQVSLATCDGEHVDA 120
           + SPLK++AK HD YVEMMM++ANSVGN+YAIG FGN KRIPKP+NQV L    GE +DA
Sbjct: 61  VSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLG---GEQIDA 120

Query: 121 KFVLEIYNKLAASKNLAN 133
           K VLEIYNKLAASKN +N
Sbjct: 121 KLVLEIYNKLAASKNSSN 135

BLAST of Cp4.1LG01g18150 vs. TrEMBL
Match: M5Y1B9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017730mg PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 5.9e-21
Identity = 64/139 (46.04%), Postives = 92/139 (66.19%), Query Frame = 1

Query: 1   MDIIATPSAQGMRRLWRRRGYQKLGSDT----RTTR----SRSFRLRRLWRLRRQASKVQ 60
           M+I+ T     ++R WRRR YQ+L  DT    R TR    + S   RR+W+LR    K++
Sbjct: 1   MEIVPTTHYDNLKRYWRRRRYQRLNGDTKKKMRVTRLGGANGSKTTRRVWKLRSAIPKLR 60

Query: 61  L-KIMSPLKLLAKFHDTYVEMMMKVANSVGNIYAIGAFGNGKRIPKPRNQVSLATCDGEH 120
           L K +SP+KLLAKFHD YV+MM ++A   GN  ++G   +GK++ K ++Q+S+A+C GE 
Sbjct: 61  LMKFLSPIKLLAKFHDAYVDMMYRIA---GNAASVGRV-SGKKVAKAQDQISIASC-GEE 120

Query: 121 VDAKFVLEIYNKLAASKNL 131
           VD + VLEIY +LAAS+ L
Sbjct: 121 VDGRLVLEIYKRLAASRQL 134

BLAST of Cp4.1LG01g18150 vs. TrEMBL
Match: M5Y361_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013192mg PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.5e-19
Identity = 63/137 (45.99%), Postives = 89/137 (64.96%), Query Frame = 1

Query: 1   MDIIATPSAQGMRRLWRRRGYQKLGSDTRTTRSRSFRL------RRLWRLRRQASKVQL- 60
           M+I        ++R WRRR YQ+L  DT+  + R  RL      RR+W+LR    K++L 
Sbjct: 1   MEIAPVAYYDNLKRYWRRRRYQRLNGDTKK-KMRVTRLGGAKTTRRIWKLRSAMPKLRLM 60

Query: 61  KIMSPLKLLAKFHDTYVEMMMKVANSVGNIYAIGAFGNGKRIPKPRNQVSLATCDGEHVD 120
           K +SPLKLL KFHD YV+MM ++A   GN  +IG   +GK++ K ++Q+S+A+C GE VD
Sbjct: 61  KFVSPLKLLTKFHDAYVDMMYRMA---GNAASIGGV-SGKKVAKAQDQISIASC-GEEVD 120

Query: 121 AKFVLEIYNKLAASKNL 131
            + VLEIY +LAAS+ L
Sbjct: 121 GRLVLEIYKRLAASRQL 131

BLAST of Cp4.1LG01g18150 vs. TrEMBL
Match: B9SJX2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0577330 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.3e-19
Identity = 56/136 (41.18%), Postives = 89/136 (65.44%), Query Frame = 1

Query: 1   MDIIATPSAQGMRRLWRRRGYQKLGSDTRTTRS-RSFRL-----RRLWRLRRQASKVQLK 60
           M++I++     ++R WRRR YQ+L   T + R  +  RL     RR+W+LR  A K+Q K
Sbjct: 1   MEMISSACYDTLKRCWRRRRYQRLHCSTNSKRKLKIIRLGGAATRRIWKLRTTAPKLQWK 60

Query: 61  IMSPLKLLAKFHDTYVEMMMKVANSVGNIYAIGAFGNGKRIPKPRNQVSLATCDGEHVDA 120
           ++SP+++L  FHD YV+MM+++AN++G +   G FG  K+  K + Q+S+ +C GE VD 
Sbjct: 61  LLSPVRILVNFHDAYVDMMIRLANNMGKLNGRGVFGR-KKFAKDK-QISMVSC-GEEVDT 120

Query: 121 KFVLEIYNKLAASKNL 131
           + VLEIY +L A++ L
Sbjct: 121 RLVLEIYKRLVAAREL 133

BLAST of Cp4.1LG01g18150 vs. TrEMBL
Match: B9HWC5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12920g PE=4 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-16
Identity = 53/135 (39.26%), Postives = 89/135 (65.93%), Query Frame = 1

Query: 1   MDIIATPSAQGMRRLWRRRGYQKL-GSDTRTTRSRSFRLRRLWRLRRQASKVQLKIMSPL 60
           M+II++   + ++R WRR  YQ+L G+  R  +       R W+L R   K+ ++I SP+
Sbjct: 1   MEIISSACYENVKRYWRRNRYQRLNGASKRKLKIARLGSGRRWKL-RAVPKLHMEIASPI 60

Query: 61  KLLAKFHDTYVEMMMKVANSVGNIYAIGAFGNGKRIPKPRNQVSLATCDGEHVDAKFVLE 120
           KLLAKFHD Y++MM+++A ++G++   G F  GK++ K ++ +S+ +  G+ VD++ +LE
Sbjct: 61  KLLAKFHDAYIDMMLRLATNIGSLNNKGFF-RGKKVAKDQH-ISMVS-SGDEVDSRLLLE 120

Query: 121 IYNKLAASKNLANGF 135
           IY KLAAS++ A  F
Sbjct: 121 IYKKLAASRDTAGCF 131

BLAST of Cp4.1LG01g18150 vs. TAIR10
Match: AT2G47485.1 (AT2G47485.1 unknown protein)

HSP 1 Score: 51.6 bits (122), Expect = 4.4e-07
Identity = 47/133 (35.34%), Postives = 62/133 (46.62%), Query Frame = 1

Query: 14  RLWRR-RGYQKL-GSDTRTTRSRS---------FRLRRLWRLRRQASKVQLKIMSPLKLL 73
           R WRR RGYQ+L GS  + +  R           R RR WR++       LK  SP KLL
Sbjct: 4   RYWRRLRGYQRLDGSAKKASSGRRNVKRVKMDPTRKRRFWRIKIVPKLRILKKASPKKLL 63

Query: 74  AKFHDTYVEMMMKVANS--VGNIYAIGAFGNGKRIPKPRNQVSLATCDGEHVDAKFVLEI 133
               D YV MM+++ANS  VG+ Y  G +G G  +              +  D K ++EI
Sbjct: 64  TWLRDAYVNMMLRLANSRVVGSSYGYGEYGYGSGLA------------SKEYDEKKLVEI 123

BLAST of Cp4.1LG01g18150 vs. TAIR10
Match: AT3G62650.2 (AT3G62650.2 unknown protein)

HSP 1 Score: 50.4 bits (119), Expect = 9.7e-07
Identity = 42/125 (33.60%), Postives = 59/125 (47.20%), Query Frame = 1

Query: 13  RRLWRR-RGYQKLGSDTRTTRSRS---------FRLRRLWRLRRQASKVQLKIMSPLKLL 72
           +R WRR RGY+KL   + TT  R           R +R WR++       LK  SP K L
Sbjct: 6   KRYWRRWRGYEKLDGSSETTSGRRKGKRVKMDPTRKKRFWRIKIVPKLRILKTASPKKFL 65

Query: 73  AKFHDTYVEMMMKVANS--VGNI-YAIGAFGNGKRIPKPRNQVSLATCDGEHVDAKFVLE 125
               D+YV+MMM++ANS  VG+  Y    FG+G+                +  D K ++E
Sbjct: 66  VWLRDSYVKMMMRLANSRVVGSSGYGGSGFGSGQM---------------KEYDEKMLVE 115

BLAST of Cp4.1LG01g18150 vs. NCBI nr
Match: gi|778708618|ref|XP_011656247.1| (PREDICTED: uncharacterized protein LOC105435696 [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-38
Identity = 93/138 (67.39%), Postives = 110/138 (79.71%), Query Frame = 1

Query: 1   MDIIATPSAQGMRRLWRRRGYQKLGS----DTRTTRS-RSFRLRRLWRLRRQAS-KVQLK 60
           MDIIAT SAQ +RRLWRRR YQ+LGS     T TTRS RSFR+ R+  +RR+ S K++LK
Sbjct: 1   MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRRRVSPKIRLK 60

Query: 61  IMSPLKLLAKFHDTYVEMMMKVANSVGNIYAIGAFGNGKRIPKPRNQVSLATCDGEHVDA 120
           + SPLK++AK HD YVEMMM++ANSVGN+YAIG FGN KRIPKP+NQV L    GE +DA
Sbjct: 61  VSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLG---GEQIDA 120

Query: 121 KFVLEIYNKLAASKNLAN 133
           K VLEIYNKLAASKN +N
Sbjct: 121 KLVLEIYNKLAASKNSSN 135

BLAST of Cp4.1LG01g18150 vs. NCBI nr
Match: gi|659072948|ref|XP_008467181.1| (PREDICTED: uncharacterized protein LOC103504591 [Cucumis melo])

HSP 1 Score: 162.9 bits (411), Expect = 3.8e-37
Identity = 92/137 (67.15%), Postives = 110/137 (80.29%), Query Frame = 1

Query: 1   MDIIATPSAQGMRRLWRRRGYQKLGS---DTRTTRS-RSFRLRRLWRLRRQAS-KVQLKI 60
           MDIIAT SAQ +RRLWRRR YQ+L S   DT  TRS RSFR+ R+  +RR+AS K++LK+
Sbjct: 1   MDIIATSSAQNLRRLWRRRTYQRLRSGSNDTVPTRSLRSFRVGRMMIMRRRASPKLRLKM 60

Query: 61  MSPLKLLAKFHDTYVEMMMKVANSVGNIYAIGAFGNGKRIPKPRNQVSLATCDGEHVDAK 120
            SPLK++AK HD YVEMMM++ANSVGN+YAIG FGN KRIPKP+NQV L    GE +DAK
Sbjct: 61  SSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLG---GEQIDAK 120

Query: 121 FVLEIYNKLAASKNLAN 133
            VLEIYNKLA+SKN +N
Sbjct: 121 LVLEIYNKLASSKNSSN 134

BLAST of Cp4.1LG01g18150 vs. NCBI nr
Match: gi|596294338|ref|XP_007226819.1| (hypothetical protein PRUPE_ppa017730mg [Prunus persica])

HSP 1 Score: 108.6 bits (270), Expect = 8.5e-21
Identity = 64/139 (46.04%), Postives = 92/139 (66.19%), Query Frame = 1

Query: 1   MDIIATPSAQGMRRLWRRRGYQKLGSDT----RTTR----SRSFRLRRLWRLRRQASKVQ 60
           M+I+ T     ++R WRRR YQ+L  DT    R TR    + S   RR+W+LR    K++
Sbjct: 1   MEIVPTTHYDNLKRYWRRRRYQRLNGDTKKKMRVTRLGGANGSKTTRRVWKLRSAIPKLR 60

Query: 61  L-KIMSPLKLLAKFHDTYVEMMMKVANSVGNIYAIGAFGNGKRIPKPRNQVSLATCDGEH 120
           L K +SP+KLLAKFHD YV+MM ++A   GN  ++G   +GK++ K ++Q+S+A+C GE 
Sbjct: 61  LMKFLSPIKLLAKFHDAYVDMMYRIA---GNAASVGRV-SGKKVAKAQDQISIASC-GEE 120

Query: 121 VDAKFVLEIYNKLAASKNL 131
           VD + VLEIY +LAAS+ L
Sbjct: 121 VDGRLVLEIYKRLAASRQL 134

BLAST of Cp4.1LG01g18150 vs. NCBI nr
Match: gi|645276452|ref|XP_008243296.1| (PREDICTED: uncharacterized protein LOC103341531 [Prunus mume])

HSP 1 Score: 107.5 bits (267), Expect = 1.9e-20
Identity = 63/140 (45.00%), Postives = 92/140 (65.71%), Query Frame = 1

Query: 1   MDIIATPSAQGMRRLWRRRGYQKLGSDTRTTRSRSFRL---------RRLWRLRRQASKV 60
           M+I+ T     ++R WRRR YQ+L  DT+  + R  RL         RR+W+LR    K+
Sbjct: 1   MEIVPTTHYDNLKRYWRRRKYQRLNGDTKK-KMRVTRLGGANGTKTTRRVWKLRSAIPKL 60

Query: 61  QL-KIMSPLKLLAKFHDTYVEMMMKVANSVGNIYAIGAFGNGKRIPKPRNQVSLATCDGE 120
           +L K +SP+KLLAKFHD YV+MM ++A   GN  ++G   +GK++ K ++Q+S+A+C GE
Sbjct: 61  RLMKFLSPIKLLAKFHDAYVDMMYRIA---GNAASVGRV-SGKKVAKAQDQISIASC-GE 120

Query: 121 HVDAKFVLEIYNKLAASKNL 131
            VD + VLEIY +LAAS+ L
Sbjct: 121 EVDGRLVLEIYKRLAASRQL 134

BLAST of Cp4.1LG01g18150 vs. NCBI nr
Match: gi|596298842|ref|XP_007227559.1| (hypothetical protein PRUPE_ppa013192mg [Prunus persica])

HSP 1 Score: 104.0 bits (258), Expect = 2.1e-19
Identity = 63/137 (45.99%), Postives = 89/137 (64.96%), Query Frame = 1

Query: 1   MDIIATPSAQGMRRLWRRRGYQKLGSDTRTTRSRSFRL------RRLWRLRRQASKVQL- 60
           M+I        ++R WRRR YQ+L  DT+  + R  RL      RR+W+LR    K++L 
Sbjct: 1   MEIAPVAYYDNLKRYWRRRRYQRLNGDTKK-KMRVTRLGGAKTTRRIWKLRSAMPKLRLM 60

Query: 61  KIMSPLKLLAKFHDTYVEMMMKVANSVGNIYAIGAFGNGKRIPKPRNQVSLATCDGEHVD 120
           K +SPLKLL KFHD YV+MM ++A   GN  +IG   +GK++ K ++Q+S+A+C GE VD
Sbjct: 61  KFVSPLKLLTKFHDAYVDMMYRMA---GNAASIGGV-SGKKVAKAQDQISIASC-GEEVD 120

Query: 121 AKFVLEIYNKLAASKNL 131
            + VLEIY +LAAS+ L
Sbjct: 121 GRLVLEIYKRLAASRQL 131

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KV01_CUCSA1.1e-3867.39Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576730 PE=4 SV=1[more]
M5Y1B9_PRUPE5.9e-2146.04Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017730mg PE=4 SV=1[more]
M5Y361_PRUPE1.5e-1945.99Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013192mg PE=4 SV=1[more]
B9SJX2_RICCO3.3e-1941.18Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0577330 PE=4 SV=1[more]
B9HWC5_POPTR1.2e-1639.26Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12920g PE=4 SV=2[more]
Match NameE-valueIdentityDescription
AT2G47485.14.4e-0735.34 unknown protein[more]
AT3G62650.29.7e-0733.60 unknown protein[more]
Match NameE-valueIdentityDescription
gi|778708618|ref|XP_011656247.1|1.5e-3867.39PREDICTED: uncharacterized protein LOC105435696 [Cucumis sativus][more]
gi|659072948|ref|XP_008467181.1|3.8e-3767.15PREDICTED: uncharacterized protein LOC103504591 [Cucumis melo][more]
gi|596294338|ref|XP_007226819.1|8.5e-2146.04hypothetical protein PRUPE_ppa017730mg [Prunus persica][more]
gi|645276452|ref|XP_008243296.1|1.9e-2045.00PREDICTED: uncharacterized protein LOC103341531 [Prunus mume][more]
gi|596298842|ref|XP_007227559.1|2.1e-1945.99hypothetical protein PRUPE_ppa013192mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g18150.1Cp4.1LG01g18150.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33702FAMILY NOT NAMEDcoord: 1..134
score: 1.3
NoneNo IPR availablePANTHERPTHR33702:SF2SUBFAMILY NOT NAMEDcoord: 1..134
score: 1.3

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g18150Cp4.1LG13g06860Cucurbita pepo (Zucchini)cpecpeB201