Cucsa.280680 (gene) Cucumber (Gy14) v1

NameCucsa.280680
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold02633 : 604856 .. 605278 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATCATTGCAACTTCATCAGCTCAAAACTTGAGGAGGCTATGGAGAAGAAGAGCATACCAAAGGTTAGGAAGTGGCAACAACATGAGTACTGTCACCACAAGATCATCAAGGAGCTTTCGGGTCGGTCGGATGATGATCATGAGACGACGAGTATCTCCTAAACTACGGTTGAAAATGTCGTCGCCGTTGAAAGTTGTAGCAAAGATTCACGATGCATATGTCGAGATGATGATGAGGTTGGCCAATAGTGTGGGGAATATGTATGCCATTGGAGGGTTTGGAAATAGGAAGAGGATACCAAAACCTCAAAATCAAGTTCCTCTTGGTGGAGAACAAATTGATGCTAAATTGGTATTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACAGCTCTAATGCTAACATAAACTTATGA

mRNA sequence

ATGGATATCATTGCAACTTCATCAGCTCAAAACTTGAGGAGGCTATGGAGAAGAAGAGCATACCAAAGGTTAGGAAGTGGCAACAACATGAGTACTGTCACCACAAGATCATCAAGGAGCTTTCGGGTCGGTCGGATGATGATCATGAGACGACGAGTATCTCCTAAACTACGGTTGAAAATGTCGTCGCCGTTGAAAGTTGTAGCAAAGATTCACGATGCATATGTCGAGATGATGATGAGGTTGGCCAATAGTGTGGGGAATATGTATGCCATTGGAGGGTTTGGAAATAGGAAGAGGATACCAAAACCTCAAAATCAAGTTCCTCTTGGTGGAGAACAAATTGATGCTAAATTGGTATTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACAGCTCTAATGCTAACATAAACTTATGA

Coding sequence (CDS)

ATGGATATCATTGCAACTTCATCAGCTCAAAACTTGAGGAGGCTATGGAGAAGAAGAGCATACCAAAGGTTAGGAAGTGGCAACAACATGAGTACTGTCACCACAAGATCATCAAGGAGCTTTCGGGTCGGTCGGATGATGATCATGAGACGACGAGTATCTCCTAAACTACGGTTGAAAATGTCGTCGCCGTTGAAAGTTGTAGCAAAGATTCACGATGCATATGTCGAGATGATGATGAGGTTGGCCAATAGTGTGGGGAATATGTATGCCATTGGAGGGTTTGGAAATAGGAAGAGGATACCAAAACCTCAAAATCAAGTTCCTCTTGGTGGAGAACAAATTGATGCTAAATTGGTATTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACAGCTCTAATGCTAACATAAACTTATGA

Protein sequence

MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRRRVSPKLRLKMSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLVLEIYNKLAASKNSSNANINL*
BLAST of Cucsa.280680 vs. TrEMBL
Match: A0A0A0KV01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576730 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 7.3e-70
Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 1

Query: 1   MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRRRVSPKLRLK 60
           MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRRRVSPK+RLK
Sbjct: 1   MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRRRVSPKIRLK 60

Query: 61  MSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLV 120
           +SSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLV
Sbjct: 61  VSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLV 120

Query: 121 LEIYNKLAASKNSSNANINL 141
           LEIYNKLAASKNSSNANINL
Sbjct: 121 LEIYNKLAASKNSSNANINL 140

BLAST of Cucsa.280680 vs. TrEMBL
Match: A0A061E4X4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_009397 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-18
Identity = 60/137 (43.80%), Postives = 81/137 (59.12%), Query Frame = 1

Query: 1   MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMM-IMRRRV-----S 60
           M+I+ ++  +NL+R WRRR YQRL          TRS R  R+ R+  I  RRV      
Sbjct: 1   MEIMRSTCCENLKRGWRRRKYQRLHGA-------TRSKRKLRISRLENIATRRVWELKTI 60

Query: 61  PKLRLKMSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQ 120
           PK  LKM SP+K++ K H AYV+MMMRL N++G     G F  +K        +  GG++
Sbjct: 61  PKPSLKMVSPIKILTKFHGAYVDMMMRLVNNMGKANNGGLFRGKKVAKDRHVSIVSGGDE 120

Query: 121 IDAKLVLEIYNKLAASK 132
           +D+KLVLEIY  LAAS+
Sbjct: 121 VDSKLVLEIYKTLAASR 130

BLAST of Cucsa.280680 vs. TrEMBL
Match: B9HWC5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12920g PE=4 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-18
Identity = 51/137 (37.23%), Postives = 87/137 (63.50%), Query Frame = 1

Query: 1   MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRR---RVSPKL 60
           M+II+++  +N++R WRR  YQRL            S R  ++ R+   RR   R  PKL
Sbjct: 1   MEIISSACYENVKRYWRRNRYQRLNGA---------SKRKLKIARLGSGRRWKLRAVPKL 60

Query: 61  RLKMSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDA 120
            ++++SP+K++AK HDAY++MM+RLA ++G++   G F  +K        +   G+++D+
Sbjct: 61  HMEIASPIKLLAKFHDAYIDMMLRLATNIGSLNNKGFFRGKKVAKDQHISMVSSGDEVDS 120

Query: 121 KLVLEIYNKLAASKNSS 135
           +L+LEIY KLAAS++++
Sbjct: 121 RLLLEIYKKLAASRDTA 128

BLAST of Cucsa.280680 vs. TrEMBL
Match: M5Y1B9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017730mg PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.9e-18
Identity = 56/136 (41.18%), Postives = 82/136 (60.29%), Query Frame = 1

Query: 1   MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTR--SSRSFRVGRMMIMRRRVSPKLR 60
           M+I+ T+   NL+R WRRR YQRL          TR   +   +  R +   R   PKLR
Sbjct: 1   MEIVPTTHYDNLKRYWRRRRYQRLNGDTKKKMRVTRLGGANGSKTTRRVWKLRSAIPKLR 60

Query: 61  L-KMSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLG--GEQI 120
           L K  SP+K++AK HDAYV+MM R+A +  ++  + G    K++ K Q+Q+ +   GE++
Sbjct: 61  LMKFLSPIKLLAKFHDAYVDMMYRIAGNAASVGRVSG----KKVAKAQDQISIASCGEEV 120

Query: 121 DAKLVLEIYNKLAASK 132
           D +LVLEIY +LAAS+
Sbjct: 121 DGRLVLEIYKRLAASR 132

BLAST of Cucsa.280680 vs. TrEMBL
Match: B9SJX2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0577330 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.4e-18
Identity = 53/135 (39.26%), Postives = 83/135 (61.48%), Query Frame = 1

Query: 1   MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMR----RRVSPK 60
           M++I+++    L+R WRRR YQRL    + ST + R  +  R+G     R    R  +PK
Sbjct: 1   MEMISSACYDTLKRCWRRRRYQRL----HCSTNSKRKLKIIRLGGAATRRIWKLRTTAPK 60

Query: 61  LRLKMSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQID 120
           L+ K+ SP++++   HDAYV+MM+RLAN++G +   G FG +K     Q  +   GE++D
Sbjct: 61  LQWKLLSPVRILVNFHDAYVDMMIRLANNMGKLNGRGVFGRKKFAKDKQISMVSCGEEVD 120

Query: 121 AKLVLEIYNKLAASK 132
            +LVLEIY +L A++
Sbjct: 121 TRLVLEIYKRLVAAR 131

BLAST of Cucsa.280680 vs. TAIR10
Match: AT2G47485.1 (AT2G47485.1 unknown protein)

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-09
Identity = 42/127 (33.07%), Postives = 66/127 (51.97%), Query Frame = 1

Query: 14  RLWRR-RAYQRLGSGNNMSTVTTRSSRSFRVG---RMMIMRRRVSPKLR-LKMSSPLKVV 73
           R WRR R YQRL      ++   R+ +  ++    +    R ++ PKLR LK +SP K++
Sbjct: 4   RYWRRLRGYQRLDGSAKKASSGRRNVKRVKMDPTRKRRFWRIKIVPKLRILKKASPKKLL 63

Query: 74  AKIHDAYVEMMMRLANS--VGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLVLEIYNK 133
             + DAYV MM+RLANS  VG+ Y  G +G             L  ++ D K ++EIY  
Sbjct: 64  TWLRDAYVNMMLRLANSRVVGSSYGYGEYGYGS---------GLASKEYDEKKLVEIYKS 121

BLAST of Cucsa.280680 vs. TAIR10
Match: AT3G62650.2 (AT3G62650.2 unknown protein)

HSP 1 Score: 55.5 bits (132), Expect = 3.2e-08
Identity = 43/131 (32.82%), Postives = 70/131 (53.44%), Query Frame = 1

Query: 13  RRLWRR-RAYQRLGSGNNMSTVTTRSSRSFRVG---RMMIMRRRVSPKLR-LKMSSPLKV 72
           +R WRR R Y++L  G++ +T   R  +  ++    +    R ++ PKLR LK +SP K 
Sbjct: 6   KRYWRRWRGYEKL-DGSSETTSGRRKGKRVKMDPTRKKRFWRIKIVPKLRILKTASPKKF 65

Query: 73  VAKIHDAYVEMMMRLANS--VGNM-YAIGGFGNRKRIPKPQNQVPLGGEQIDAKLVLEIY 132
           +  + D+YV+MMMRLANS  VG+  Y   GFG+ +             ++ D K+++EIY
Sbjct: 66  LVWLRDSYVKMMMRLANSRVVGSSGYGGSGFGSGQM------------KEYDEKMLVEIY 123

Query: 133 NKLAASKNSSN 136
             +   +   N
Sbjct: 126 KSILMVQAQGN 123

BLAST of Cucsa.280680 vs. NCBI nr
Match: gi|778708618|ref|XP_011656247.1| (PREDICTED: uncharacterized protein LOC105435696 [Cucumis sativus])

HSP 1 Score: 271.2 bits (692), Expect = 1.0e-69
Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 1

Query: 1   MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRRRVSPKLRLK 60
           MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRRRVSPK+RLK
Sbjct: 1   MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRRRVSPKIRLK 60

Query: 61  MSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLV 120
           +SSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLV
Sbjct: 61  VSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLV 120

Query: 121 LEIYNKLAASKNSSNANINL 141
           LEIYNKLAASKNSSNANINL
Sbjct: 121 LEIYNKLAASKNSSNANINL 140

BLAST of Cucsa.280680 vs. NCBI nr
Match: gi|659072948|ref|XP_008467181.1| (PREDICTED: uncharacterized protein LOC103504591 [Cucumis melo])

HSP 1 Score: 251.5 bits (641), Expect = 8.5e-64
Identity = 131/140 (93.57%), Postives = 133/140 (95.00%), Query Frame = 1

Query: 1   MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRRRVSPKLRLK 60
           MDIIATSSAQNLRRLWRRR YQRL SG+N  TV TRS RSFRVGRMMIMRRR SPKLRLK
Sbjct: 1   MDIIATSSAQNLRRLWRRRTYQRLRSGSN-DTVPTRSLRSFRVGRMMIMRRRASPKLRLK 60

Query: 61  MSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLV 120
           MSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLV
Sbjct: 61  MSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLV 120

Query: 121 LEIYNKLAASKNSSNANINL 141
           LEIYNKLA+SKNSSNANINL
Sbjct: 121 LEIYNKLASSKNSSNANINL 139

BLAST of Cucsa.280680 vs. NCBI nr
Match: gi|743889506|ref|XP_011038766.1| (PREDICTED: uncharacterized protein LOC105135548 [Populus euphratica])

HSP 1 Score: 102.1 bits (253), Expect = 8.4e-19
Identity = 53/138 (38.41%), Postives = 88/138 (63.77%), Query Frame = 1

Query: 1   MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRR---RVSPKL 60
           M+II+++  +N++R WRR  YQRL            S R  ++ R+   RR   RV PKL
Sbjct: 1   MEIISSACYENVKRYWRRNRYQRLNGA---------SKRKLKIARLGSGRRWKLRVVPKL 60

Query: 61  RLKMSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDA 120
            ++++SP+K++AK HDAY++MM+RLA ++G++   G F  +K        +   G+++D+
Sbjct: 61  HMEIASPIKLLAKFHDAYIDMMIRLATTIGSLNNKGFFRGKKVAKDQHISMVSSGDEVDS 120

Query: 121 KLVLEIYNKLAASKNSSN 136
           +L+LEIY KLAAS++ S+
Sbjct: 121 RLLLEIYKKLAASRDMSD 129

BLAST of Cucsa.280680 vs. NCBI nr
Match: gi|566190538|ref|XP_002315915.2| (hypothetical protein POPTR_0010s12920g [Populus trichocarpa])

HSP 1 Score: 100.1 bits (248), Expect = 3.2e-18
Identity = 51/137 (37.23%), Postives = 87/137 (63.50%), Query Frame = 1

Query: 1   MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRR---RVSPKL 60
           M+II+++  +N++R WRR  YQRL            S R  ++ R+   RR   R  PKL
Sbjct: 1   MEIISSACYENVKRYWRRNRYQRLNGA---------SKRKLKIARLGSGRRWKLRAVPKL 60

Query: 61  RLKMSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDA 120
            ++++SP+K++AK HDAY++MM+RLA ++G++   G F  +K        +   G+++D+
Sbjct: 61  HMEIASPIKLLAKFHDAYIDMMLRLATNIGSLNNKGFFRGKKVAKDQHISMVSSGDEVDS 120

Query: 121 KLVLEIYNKLAASKNSS 135
           +L+LEIY KLAAS++++
Sbjct: 121 RLLLEIYKKLAASRDTA 128

BLAST of Cucsa.280680 vs. NCBI nr
Match: gi|590692956|ref|XP_007044199.1| (Uncharacterized protein TCM_009397 [Theobroma cacao])

HSP 1 Score: 100.1 bits (248), Expect = 3.2e-18
Identity = 60/137 (43.80%), Postives = 81/137 (59.12%), Query Frame = 1

Query: 1   MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMM-IMRRRV-----S 60
           M+I+ ++  +NL+R WRRR YQRL          TRS R  R+ R+  I  RRV      
Sbjct: 1   MEIMRSTCCENLKRGWRRRKYQRLHGA-------TRSKRKLRISRLENIATRRVWELKTI 60

Query: 61  PKLRLKMSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQ 120
           PK  LKM SP+K++ K H AYV+MMMRL N++G     G F  +K        +  GG++
Sbjct: 61  PKPSLKMVSPIKILTKFHGAYVDMMMRLVNNMGKANNGGLFRGKKVAKDRHVSIVSGGDE 120

Query: 121 IDAKLVLEIYNKLAASK 132
           +D+KLVLEIY  LAAS+
Sbjct: 121 VDSKLVLEIYKTLAASR 130

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KV01_CUCSA7.3e-7098.57Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576730 PE=4 SV=1[more]
A0A061E4X4_THECC2.2e-1843.80Uncharacterized protein OS=Theobroma cacao GN=TCM_009397 PE=4 SV=1[more]
B9HWC5_POPTR2.2e-1837.23Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12920g PE=4 SV=2[more]
M5Y1B9_PRUPE4.9e-1841.18Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017730mg PE=4 SV=1[more]
B9SJX2_RICCO8.4e-1839.26Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0577330 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G47485.12.2e-0933.07 unknown protein[more]
AT3G62650.23.2e-0832.82 unknown protein[more]
Match NameE-valueIdentityDescription
gi|778708618|ref|XP_011656247.1|1.0e-6998.57PREDICTED: uncharacterized protein LOC105435696 [Cucumis sativus][more]
gi|659072948|ref|XP_008467181.1|8.5e-6493.57PREDICTED: uncharacterized protein LOC103504591 [Cucumis melo][more]
gi|743889506|ref|XP_011038766.1|8.4e-1938.41PREDICTED: uncharacterized protein LOC105135548 [Populus euphratica][more]
gi|566190538|ref|XP_002315915.2|3.2e-1837.23hypothetical protein POPTR_0010s12920g [Populus trichocarpa][more]
gi|590692956|ref|XP_007044199.1|3.2e-1843.80Uncharacterized protein TCM_009397 [Theobroma cacao][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.280680.1Cucsa.280680.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33702FAMILY NOT NAMEDcoord: 1..134
score: 2.0
NoneNo IPR availablePANTHERPTHR33702:SF2SUBFAMILY NOT NAMEDcoord: 1..134
score: 2.0

The following gene(s) are paralogous to this gene:

None