Cucsa.280680 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATATCATTGCAACTTCATCAGCTCAAAACTTGAGGAGGCTATGGAGAAGAAGAGCATACCAAAGGTTAGGAAGTGGCAACAACATGAGTACTGTCACCACAAGATCATCAAGGAGCTTTCGGGTCGGTCGGATGATGATCATGAGACGACGAGTATCTCCTAAACTACGGTTGAAAATGTCGTCGCCGTTGAAAGTTGTAGCAAAGATTCACGATGCATATGTCGAGATGATGATGAGGTTGGCCAATAGTGTGGGGAATATGTATGCCATTGGAGGGTTTGGAAATAGGAAGAGGATACCAAAACCTCAAAATCAAGTTCCTCTTGGTGGAGAACAAATTGATGCTAAATTGGTATTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACAGCTCTAATGCTAACATAAACTTATGA ATGGATATCATTGCAACTTCATCAGCTCAAAACTTGAGGAGGCTATGGAGAAGAAGAGCATACCAAAGGTTAGGAAGTGGCAACAACATGAGTACTGTCACCACAAGATCATCAAGGAGCTTTCGGGTCGGTCGGATGATGATCATGAGACGACGAGTATCTCCTAAACTACGGTTGAAAATGTCGTCGCCGTTGAAAGTTGTAGCAAAGATTCACGATGCATATGTCGAGATGATGATGAGGTTGGCCAATAGTGTGGGGAATATGTATGCCATTGGAGGGTTTGGAAATAGGAAGAGGATACCAAAACCTCAAAATCAAGTTCCTCTTGGTGGAGAACAAATTGATGCTAAATTGGTATTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACAGCTCTAATGCTAACATAAACTTATGA ATGGATATCATTGCAACTTCATCAGCTCAAAACTTGAGGAGGCTATGGAGAAGAAGAGCATACCAAAGGTTAGGAAGTGGCAACAACATGAGTACTGTCACCACAAGATCATCAAGGAGCTTTCGGGTCGGTCGGATGATGATCATGAGACGACGAGTATCTCCTAAACTACGGTTGAAAATGTCGTCGCCGTTGAAAGTTGTAGCAAAGATTCACGATGCATATGTCGAGATGATGATGAGGTTGGCCAATAGTGTGGGGAATATGTATGCCATTGGAGGGTTTGGAAATAGGAAGAGGATACCAAAACCTCAAAATCAAGTTCCTCTTGGTGGAGAACAAATTGATGCTAAATTGGTATTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACAGCTCTAATGCTAACATAAACTTATGA MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRRRVSPKLRLKMSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPLGGEQIDAKLVLEIYNKLAASKNSSNANINL*
BLAST of Cucsa.280680 vs. TrEMBL
Match: A0A0A0KV01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576730 PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 7.3e-70 Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 1
BLAST of Cucsa.280680 vs. TrEMBL
Match: A0A061E4X4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_009397 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 2.2e-18 Identity = 60/137 (43.80%), Postives = 81/137 (59.12%), Query Frame = 1
BLAST of Cucsa.280680 vs. TrEMBL
Match: B9HWC5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12920g PE=4 SV=2) HSP 1 Score: 100.1 bits (248), Expect = 2.2e-18 Identity = 51/137 (37.23%), Postives = 87/137 (63.50%), Query Frame = 1
BLAST of Cucsa.280680 vs. TrEMBL
Match: M5Y1B9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017730mg PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 4.9e-18 Identity = 56/136 (41.18%), Postives = 82/136 (60.29%), Query Frame = 1
BLAST of Cucsa.280680 vs. TrEMBL
Match: B9SJX2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0577330 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 8.4e-18 Identity = 53/135 (39.26%), Postives = 83/135 (61.48%), Query Frame = 1
BLAST of Cucsa.280680 vs. TAIR10
Match: AT2G47485.1 (AT2G47485.1 unknown protein) HSP 1 Score: 59.3 bits (142), Expect = 2.2e-09 Identity = 42/127 (33.07%), Postives = 66/127 (51.97%), Query Frame = 1
BLAST of Cucsa.280680 vs. TAIR10
Match: AT3G62650.2 (AT3G62650.2 unknown protein) HSP 1 Score: 55.5 bits (132), Expect = 3.2e-08 Identity = 43/131 (32.82%), Postives = 70/131 (53.44%), Query Frame = 1
BLAST of Cucsa.280680 vs. NCBI nr
Match: gi|778708618|ref|XP_011656247.1| (PREDICTED: uncharacterized protein LOC105435696 [Cucumis sativus]) HSP 1 Score: 271.2 bits (692), Expect = 1.0e-69 Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 1
BLAST of Cucsa.280680 vs. NCBI nr
Match: gi|659072948|ref|XP_008467181.1| (PREDICTED: uncharacterized protein LOC103504591 [Cucumis melo]) HSP 1 Score: 251.5 bits (641), Expect = 8.5e-64 Identity = 131/140 (93.57%), Postives = 133/140 (95.00%), Query Frame = 1
BLAST of Cucsa.280680 vs. NCBI nr
Match: gi|743889506|ref|XP_011038766.1| (PREDICTED: uncharacterized protein LOC105135548 [Populus euphratica]) HSP 1 Score: 102.1 bits (253), Expect = 8.4e-19 Identity = 53/138 (38.41%), Postives = 88/138 (63.77%), Query Frame = 1
BLAST of Cucsa.280680 vs. NCBI nr
Match: gi|566190538|ref|XP_002315915.2| (hypothetical protein POPTR_0010s12920g [Populus trichocarpa]) HSP 1 Score: 100.1 bits (248), Expect = 3.2e-18 Identity = 51/137 (37.23%), Postives = 87/137 (63.50%), Query Frame = 1
BLAST of Cucsa.280680 vs. NCBI nr
Match: gi|590692956|ref|XP_007044199.1| (Uncharacterized protein TCM_009397 [Theobroma cacao]) HSP 1 Score: 100.1 bits (248), Expect = 3.2e-18 Identity = 60/137 (43.80%), Postives = 81/137 (59.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |