Cp4.1LG13g06860 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATATTATAGCAACCCCATCAGCTCTAAGCTTGAAGAGGCTATGGAGAAGAAGAAGATACCAAAGACTAGGAAGCGGCACGGGCGCTCCAAGATCAAGGAGCTTCCATCTCGGGCGACTATGGCGGATGAGACGACGAGCTCCGAAACTACGGTTGAAAATGGCATCCCCATTGAAAGTTTTAGCGAGGTTCCACGACGCATATGTAAAGATGATGACGAGGGTCGCGAATAATGTGGGGAATATGTATGCCATTGGAGGCTTTGGAAATGGGAAGAGGATACCAAAACTTGGTAATCAAGTGTCTTTGGTTTATTGTGGTGGGGAACAAGTTGACGCCAAGTTGGTGTTGGAAATGTATAACAAACTTGCTGCTTCCAAGAACTTGACCGTAGCATAG ATGGATATTATAGCAACCCCATCAGCTCTAAGCTTGAAGAGGCTATGGAGAAGAAGAAGATACCAAAGACTAGGAAGCGGCACGGGCGCTCCAAGATCAAGGAGCTTCCATCTCGGGCGACTATGGCGGATGAGACGACGAGCTCCGAAACTACGGTTGAAAATGGCATCCCCATTGAAAGTTTTAGCGAGGTTCCACGACGCATATGTAAAGATGATGACGAGGGTCGCGAATAATGTGGGGAATATGTATGCCATTGGAGGCTTTGGAAATGGGAAGAGGATACCAAAACTTGGTAATCAAGTGTCTTTGGTTTATTGTGGTGGGGAACAAGTTGACGCCAAGTTGGTGTTGGAAATGTATAACAAACTTGCTGCTTCCAAGAACTTGACCGTAGCATAG ATGGATATTATAGCAACCCCATCAGCTCTAAGCTTGAAGAGGCTATGGAGAAGAAGAAGATACCAAAGACTAGGAAGCGGCACGGGCGCTCCAAGATCAAGGAGCTTCCATCTCGGGCGACTATGGCGGATGAGACGACGAGCTCCGAAACTACGGTTGAAAATGGCATCCCCATTGAAAGTTTTAGCGAGGTTCCACGACGCATATGTAAAGATGATGACGAGGGTCGCGAATAATGTGGGGAATATGTATGCCATTGGAGGCTTTGGAAATGGGAAGAGGATACCAAAACTTGGTAATCAAGTGTCTTTGGTTTATTGTGGTGGGGAACAAGTTGACGCCAAGTTGGTGTTGGAAATGTATAACAAACTTGCTGCTTCCAAGAACTTGACCGTAGCATAG MDIIATPSALSLKRLWRRRRYQRLGSGTGAPRSRSFHLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKLGNQVSLVYCGGEQVDAKLVLEMYNKLAASKNLTVA
BLAST of Cp4.1LG13g06860 vs. TrEMBL
Match: A0A0A0KV01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576730 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 1.6e-39 Identity = 94/135 (69.63%), Postives = 109/135 (80.74%), Query Frame = 1
BLAST of Cp4.1LG13g06860 vs. TrEMBL
Match: B9SJX2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0577330 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.0e-21 Identity = 63/136 (46.32%), Postives = 90/136 (66.18%), Query Frame = 1
BLAST of Cp4.1LG13g06860 vs. TrEMBL
Match: M5Y1B9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017730mg PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 7.7e-21 Identity = 65/142 (45.77%), Postives = 90/142 (63.38%), Query Frame = 1
BLAST of Cp4.1LG13g06860 vs. TrEMBL
Match: M5Y361_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013192mg PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 2.9e-20 Identity = 65/129 (50.39%), Postives = 86/129 (66.67%), Query Frame = 1
BLAST of Cp4.1LG13g06860 vs. TrEMBL
Match: B9HWC5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12920g PE=4 SV=2) HSP 1 Score: 100.1 bits (248), Expect = 2.1e-18 Identity = 57/130 (43.85%), Postives = 89/130 (68.46%), Query Frame = 1
BLAST of Cp4.1LG13g06860 vs. TAIR10
Match: AT2G47485.1 (AT2G47485.1 unknown protein) HSP 1 Score: 49.7 bits (117), Expect = 1.6e-06 Identity = 50/132 (37.88%), Postives = 63/132 (47.73%), Query Frame = 1
BLAST of Cp4.1LG13g06860 vs. NCBI nr
Match: gi|778708618|ref|XP_011656247.1| (PREDICTED: uncharacterized protein LOC105435696 [Cucumis sativus]) HSP 1 Score: 170.2 bits (430), Expect = 2.4e-39 Identity = 94/135 (69.63%), Postives = 109/135 (80.74%), Query Frame = 1
BLAST of Cp4.1LG13g06860 vs. NCBI nr
Match: gi|659072948|ref|XP_008467181.1| (PREDICTED: uncharacterized protein LOC103504591 [Cucumis melo]) HSP 1 Score: 168.7 bits (426), Expect = 6.9e-39 Identity = 97/134 (72.39%), Postives = 110/134 (82.09%), Query Frame = 1
BLAST of Cp4.1LG13g06860 vs. NCBI nr
Match: gi|255570673|ref|XP_002526291.1| (PREDICTED: uncharacterized protein LOC8275092 [Ricinus communis]) HSP 1 Score: 110.2 bits (274), Expect = 2.9e-21 Identity = 63/136 (46.32%), Postives = 90/136 (66.18%), Query Frame = 1
BLAST of Cp4.1LG13g06860 vs. NCBI nr
Match: gi|596294338|ref|XP_007226819.1| (hypothetical protein PRUPE_ppa017730mg [Prunus persica]) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20 Identity = 65/142 (45.77%), Postives = 90/142 (63.38%), Query Frame = 1
BLAST of Cp4.1LG13g06860 vs. NCBI nr
Match: gi|645276452|ref|XP_008243296.1| (PREDICTED: uncharacterized protein LOC103341531 [Prunus mume]) HSP 1 Score: 107.1 bits (266), Expect = 2.5e-20 Identity = 64/142 (45.07%), Postives = 90/142 (63.38%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |