Cla97C01G006200 (gene) Watermelon (97103) v2

NameCla97C01G006200
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionBinding protein
LocationCla97Chr01 : 6099720 .. 6100142 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATTATTTCAACCCCATCAGCTCAAAGCTTGAGAAGGCTATGGAGAAGAAGAAGATACCAAAGGCTAGGAAGTGGTAGTACTGGTCCCACAAGATCAAGGAGCTTTCGGCTCGGTCGGGTGTGGCGGATGAGACGACAAGTAGCTCCGAAACTACGGTTGAAAGCGTCGTCGCCGTTGAAAGTTCTAGCGAAGATTCACGACGGGTATGTCGAAATGATGATGAGGTTGGCCAACAGTGTGGGGAATATGTATGCCATTGGAGCCTTTGGAAATAGGAAGAGGATACCTAAACCTAAAAATCAAGTTCCTCTTGTTTCTTGTGGTGGGGAACAAGTTGATGCTAAATTGGTCTTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACAACTCAACTACTGCTGCTCCTAATTTTTGA

mRNA sequence

ATGGATATTATTTCAACCCCATCAGCTCAAAGCTTGAGAAGGCTATGGAGAAGAAGAAGATACCAAAGGCTAGGAAGTGGTAGTACTGGTCCCACAAGATCAAGGAGCTTTCGGCTCGGTCGGGTGTGGCGGATGAGACGACAAGTAGCTCCGAAACTACGGTTGAAAGCGTCGTCGCCGTTGAAAGTTCTAGCGAAGATTCACGACGGGTATGTCGAAATGATGATGAGGTTGGCCAACAGTGTGGGGAATATGTATGCCATTGGAGCCTTTGGAAATAGGAAGAGGATACCTAAACCTAAAAATCAAGTTCCTCTTGTTTCTTGTGGTGGGGAACAAGTTGATGCTAAATTGGTCTTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACAACTCAACTACTGCTGCTCCTAATTTTTGA

Coding sequence (CDS)

ATGGATATTATTTCAACCCCATCAGCTCAAAGCTTGAGAAGGCTATGGAGAAGAAGAAGATACCAAAGGCTAGGAAGTGGTAGTACTGGTCCCACAAGATCAAGGAGCTTTCGGCTCGGTCGGGTGTGGCGGATGAGACGACAAGTAGCTCCGAAACTACGGTTGAAAGCGTCGTCGCCGTTGAAAGTTCTAGCGAAGATTCACGACGGGTATGTCGAAATGATGATGAGGTTGGCCAACAGTGTGGGGAATATGTATGCCATTGGAGCCTTTGGAAATAGGAAGAGGATACCTAAACCTAAAAATCAAGTTCCTCTTGTTTCTTGTGGTGGGGAACAAGTTGATGCTAAATTGGTCTTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACAACTCAACTACTGCTGCTCCTAATTTTTGA

Protein sequence

MDIISTPSAQSLRRLWRRRRYQRLGSGSTGPTRSRSFRLGRVWRMRRQVAPKLRLKASSPLKVLAKIHDGYVEMMMRLANSVGNMYAIGAFGNRKRIPKPKNQVPLVSCGGEQVDAKLVLEIYNKLAASKNNSTTAAPNF
BLAST of Cla97C01G006200 vs. NCBI nr
Match: XP_022939174.1 (uncharacterized protein LOC111445168 [Cucurbita moschata])

HSP 1 Score: 204.5 bits (519), Expect = 2.3e-49
Identity = 106/136 (77.94%), Postives = 116/136 (85.29%), Query Frame = 0

Query: 1   MDIISTPSAQSLRRLWRRRRYQRLGSGSTGPTRSRSFRLGRVWRMRRQVAPKLRLKASSP 60
           MDII+TPSA SL+RLWRRRRYQRLGSG TG  RSRSF LGR+WRMRR+ APKLRLK + P
Sbjct: 1   MDIIATPSALSLKRLWRRRRYQRLGSG-TGAARSRSFHLGRLWRMRRR-APKLRLKMALP 60

Query: 61  LKVLAKIHDGYVEMMMRLANSVGNMYAIGAFGNRKRIPKPKNQVPLVSCGGEQVDAKLVL 120
            K LA+ HD YV+MM R+AN VGNMYAIG FGN KRIPKP+NQV LVSCGGEQVDAKLVL
Sbjct: 61  FKALARFHDAYVKMMTRVANKVGNMYAIGGFGNGKRIPKPRNQVSLVSCGGEQVDAKLVL 120

Query: 121 EIYNKLAASKNNSTTA 137
           E+YNKLAASKN S  A
Sbjct: 121 EMYNKLAASKNLSVAA 134

BLAST of Cla97C01G006200 vs. NCBI nr
Match: XP_022993314.1 (uncharacterized protein LOC111489358 [Cucurbita maxima])

HSP 1 Score: 204.5 bits (519), Expect = 2.3e-49
Identity = 106/136 (77.94%), Postives = 117/136 (86.03%), Query Frame = 0

Query: 1   MDIISTPSAQSLRRLWRRRRYQRLGSGSTGPTRSRSFRLGRVWRMRRQVAPKLRLKASSP 60
           MDII+TPSA SL+RLWRRRRYQRLGSG TG  RSRSFRLGR+WR+RR+ APKLRLK  SP
Sbjct: 1   MDIIATPSALSLKRLWRRRRYQRLGSG-TGAARSRSFRLGRLWRIRRR-APKLRLKMVSP 60

Query: 61  LKVLAKIHDGYVEMMMRLANSVGNMYAIGAFGNRKRIPKPKNQVPLVSCGGEQVDAKLVL 120
            K LA+ HD YV+MMMR+ANSVG+MYAIG +GN KRIPKP NQV LVSCGGEQVD KLVL
Sbjct: 61  FKALARFHDAYVKMMMRVANSVGSMYAIGGYGNGKRIPKPSNQVSLVSCGGEQVDTKLVL 120

Query: 121 EIYNKLAASKNNSTTA 137
           E+YNKLAASKN S  A
Sbjct: 121 EMYNKLAASKNLSVAA 134

BLAST of Cla97C01G006200 vs. NCBI nr
Match: XP_011656247.1 (PREDICTED: uncharacterized protein LOC105435696 [Cucumis sativus] >KGN51531.1 hypothetical protein Csa_5G576730 [Cucumis sativus])

HSP 1 Score: 203.4 bits (516), Expect = 5.2e-49
Identity = 110/137 (80.29%), Postives = 121/137 (88.32%), Query Frame = 0

Query: 1   MDIISTPSAQSLRRLWRRRRYQRLGSG---STGPTR-SRSFRLGRVWRMRRQVAPKLRLK 60
           MDII+T SAQ+LRRLWRRR YQRLGSG   ST  TR SRSFR+GR+  MRR+V+PK+RLK
Sbjct: 1   MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRRRVSPKIRLK 60

Query: 61  ASSPLKVLAKIHDGYVEMMMRLANSVGNMYAIGAFGNRKRIPKPKNQVPLVSCGGEQVDA 120
            SSPLKV+AKIHD YVEMMMRLANSVGNMYAIG FGNRKRIPKP+NQVPL   GGEQ+DA
Sbjct: 61  VSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPL---GGEQIDA 120

Query: 121 KLVLEIYNKLAASKNNS 134
           KLVLEIYNKLAASKN+S
Sbjct: 121 KLVLEIYNKLAASKNSS 134

BLAST of Cla97C01G006200 vs. NCBI nr
Match: XP_008467181.1 (PREDICTED: uncharacterized protein LOC103504591 [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 2.0e-48
Identity = 109/136 (80.15%), Postives = 120/136 (88.24%), Query Frame = 0

Query: 1   MDIISTPSAQSLRRLWRRRRYQRLGSGS--TGPTRS-RSFRLGRVWRMRRQVAPKLRLKA 60
           MDII+T SAQ+LRRLWRRR YQRL SGS  T PTRS RSFR+GR+  MRR+ +PKLRLK 
Sbjct: 1   MDIIATSSAQNLRRLWRRRTYQRLRSGSNDTVPTRSLRSFRVGRMMIMRRRASPKLRLKM 60

Query: 61  SSPLKVLAKIHDGYVEMMMRLANSVGNMYAIGAFGNRKRIPKPKNQVPLVSCGGEQVDAK 120
           SSPLKV+AKIHD YVEMMMRLANSVGNMYAIG FGNRKRIPKP+NQVPL   GGEQ+DAK
Sbjct: 61  SSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPL---GGEQIDAK 120

Query: 121 LVLEIYNKLAASKNNS 134
           LVLEIYNKLA+SKN+S
Sbjct: 121 LVLEIYNKLASSKNSS 133

BLAST of Cla97C01G006200 vs. NCBI nr
Match: XP_022152306.1 (uncharacterized protein LOC111020054 [Momordica charantia])

HSP 1 Score: 200.7 bits (509), Expect = 3.3e-48
Identity = 104/134 (77.61%), Postives = 117/134 (87.31%), Query Frame = 0

Query: 1   MDIISTPSAQSLRRLWRRRRYQRLGSGSTGPTRSRSFRLGRVWRMRRQVAPKLRLKASSP 60
           M+II+TPS++S+RR WRRR+YQRLGS S GPTRSRSFRLGR+WRMRR  AP+LR K +SP
Sbjct: 1   MEIIATPSSESIRRTWRRRKYQRLGS-SNGPTRSRSFRLGRLWRMRRG-APRLRFKMASP 60

Query: 61  LKVLAKIHDGYVEMMMRLANSVGNMYAIGAF---GNRKRIPKPKNQVPLVSCGGEQVDAK 120
           LK+LA+ HD YVEMMMR+AN VGNMYAIGAF   G R+ IPKP NQV LVSCGGEQVDAK
Sbjct: 61  LKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQVDAK 120

Query: 121 LVLEIYNKLAASKN 132
           LVLEIYNKLAASKN
Sbjct: 121 LVLEIYNKLAASKN 132

BLAST of Cla97C01G006200 vs. TrEMBL
Match: tr|A0A0A0KV01|A0A0A0KV01_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576730 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.4e-49
Identity = 110/137 (80.29%), Postives = 121/137 (88.32%), Query Frame = 0

Query: 1   MDIISTPSAQSLRRLWRRRRYQRLGSG---STGPTR-SRSFRLGRVWRMRRQVAPKLRLK 60
           MDII+T SAQ+LRRLWRRR YQRLGSG   ST  TR SRSFR+GR+  MRR+V+PK+RLK
Sbjct: 1   MDIIATSSAQNLRRLWRRRAYQRLGSGNNMSTVTTRSSRSFRVGRMMIMRRRVSPKIRLK 60

Query: 61  ASSPLKVLAKIHDGYVEMMMRLANSVGNMYAIGAFGNRKRIPKPKNQVPLVSCGGEQVDA 120
            SSPLKV+AKIHD YVEMMMRLANSVGNMYAIG FGNRKRIPKP+NQVPL   GGEQ+DA
Sbjct: 61  VSSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPL---GGEQIDA 120

Query: 121 KLVLEIYNKLAASKNNS 134
           KLVLEIYNKLAASKN+S
Sbjct: 121 KLVLEIYNKLAASKNSS 134

BLAST of Cla97C01G006200 vs. TrEMBL
Match: tr|A0A1S3CSX3|A0A1S3CSX3_CUCME (uncharacterized protein LOC103504591 OS=Cucumis melo OX=3656 GN=LOC103504591 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.3e-48
Identity = 109/136 (80.15%), Postives = 120/136 (88.24%), Query Frame = 0

Query: 1   MDIISTPSAQSLRRLWRRRRYQRLGSGS--TGPTRS-RSFRLGRVWRMRRQVAPKLRLKA 60
           MDII+T SAQ+LRRLWRRR YQRL SGS  T PTRS RSFR+GR+  MRR+ +PKLRLK 
Sbjct: 1   MDIIATSSAQNLRRLWRRRTYQRLRSGSNDTVPTRSLRSFRVGRMMIMRRRASPKLRLKM 60

Query: 61  SSPLKVLAKIHDGYVEMMMRLANSVGNMYAIGAFGNRKRIPKPKNQVPLVSCGGEQVDAK 120
           SSPLKV+AKIHD YVEMMMRLANSVGNMYAIG FGNRKRIPKP+NQVPL   GGEQ+DAK
Sbjct: 61  SSPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPL---GGEQIDAK 120

Query: 121 LVLEIYNKLAASKNNS 134
           LVLEIYNKLA+SKN+S
Sbjct: 121 LVLEIYNKLASSKNSS 133

BLAST of Cla97C01G006200 vs. TrEMBL
Match: tr|B9SJX2|B9SJX2_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0577330 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.1e-22
Identity = 62/135 (45.93%), Postives = 90/135 (66.67%), Query Frame = 0

Query: 1   MDIISTPSAQSLRRLWRRRRYQRLGSGSTGPTRSRSFRLG-----RVWRMRRQVAPKLRL 60
           M++IS+    +L+R WRRRRYQRL   +    + +  RLG     R+W++ R  APKL+ 
Sbjct: 1   MEMISSACYDTLKRCWRRRRYQRLHCSTNSKRKLKIIRLGGAATRRIWKL-RTTAPKLQW 60

Query: 61  KASSPLKVLAKIHDGYVEMMMRLANSVGNMYAIGAFGNRKRIPKPKNQVPLVSCGGEQVD 120
           K  SP+++L   HD YV+MM+RLAN++G +   G FG RK+  K K Q+ +VSC GE+VD
Sbjct: 61  KLLSPVRILVNFHDAYVDMMIRLANNMGKLNGRGVFG-RKKFAKDK-QISMVSC-GEEVD 120

Query: 121 AKLVLEIYNKLAASK 131
            +LVLEIY +L A++
Sbjct: 121 TRLVLEIYKRLVAAR 131

BLAST of Cla97C01G006200 vs. TrEMBL
Match: tr|V4TMF2|V4TMF2_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017837mg PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.8e-19
Identity = 63/140 (45.00%), Postives = 85/140 (60.71%), Query Frame = 0

Query: 1   MDIISTPSAQSLRRLWRRRRYQRLGSGSTGPTRSRSFRLG---------RVWRMRRQVAP 60
           MDI+     + L R WRRR+YQR+   S G  + +  RLG          +WR+RR   P
Sbjct: 1   MDIVHLAYYERLNRYWRRRKYQRINGASHGKRKLKILRLGGGAADAPRHHLWRIRR--VP 60

Query: 61  KLRLKASSPLKVLAKIHDGYVEMMMRLANSVGNMYAIGA-FGNRKRIPKPKNQVPLVSCG 120
           KL  K  SP+K+LAKI D YV MM+ LAN + N    G  F ++K I K + +V ++   
Sbjct: 61  KLYWKMISPIKLLAKIRDAYVGMMICLANKMANTDINGGLFKSKKNIAK-QREVSILVSS 120

Query: 121 GEQVDAKLVLEIYNKLAASK 131
           GEQVD++LVLEIYN+LAAS+
Sbjct: 121 GEQVDSRLVLEIYNRLAASR 137

BLAST of Cla97C01G006200 vs. TrEMBL
Match: tr|M5Y1B9|M5Y1B9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G317700 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.3e-19
Identity = 66/140 (47.14%), Postives = 91/140 (65.00%), Query Frame = 0

Query: 1   MDIISTPSAQSLRRLWRRRRYQRLGSGSTGPTRSRSFRLG---------RVWRMRRQVAP 60
           M+I+ T    +L+R WRRRRYQRL +G T   + R  RLG         RVW++R  + P
Sbjct: 1   MEIVPTTHYDNLKRYWRRRRYQRL-NGDT-KKKMRVTRLGGANGSKTTRRVWKLRSAI-P 60

Query: 61  KLRL-KASSPLKVLAKIHDGYVEMMMRLANSVGNMYAIGAFGNRKRIPKPKNQVPLVSCG 120
           KLRL K  SP+K+LAK HD YV+MM R+A   GN  ++G     K++ K ++Q+ + SC 
Sbjct: 61  KLRLMKFLSPIKLLAKFHDAYVDMMYRIA---GNAASVGRVSG-KKVAKAQDQISIASC- 120

Query: 121 GEQVDAKLVLEIYNKLAASK 131
           GE+VD +LVLEIY +LAAS+
Sbjct: 121 GEEVDGRLVLEIYKRLAASR 132

BLAST of Cla97C01G006200 vs. TAIR10
Match: AT2G47485.1 (unknown protein)

HSP 1 Score: 57.8 bits (138), Expect = 6.3e-09
Identity = 47/132 (35.61%), Postives = 66/132 (50.00%), Query Frame = 0

Query: 14  RLWRR-RRYQRL-GSGSTGPTRSRSF--------RLGRVWRMRRQVAPKLR-LKASSPLK 73
           R WRR R YQRL GS     +  R+         R  R WR++  + PKLR LK +SP K
Sbjct: 4   RYWRRLRGYQRLDGSAKKASSGRRNVKRVKMDPTRKRRFWRIK--IVPKLRILKKASPKK 63

Query: 74  VLAKIHDGYVEMMMRLANS--VGNMYAIGAFGNRKRIPKPKNQVPLVSCGGEQVDAKLVL 133
           +L  + D YV MM+RLANS  VG+ Y  G +G    +              ++ D K ++
Sbjct: 64  LLTWLRDAYVNMMLRLANSRVVGSSYGYGEYGYGSGL------------ASKEYDEKKLV 121

BLAST of Cla97C01G006200 vs. TAIR10
Match: AT3G62650.2 (unknown protein)

HSP 1 Score: 52.4 bits (124), Expect = 2.7e-07
Identity = 46/127 (36.22%), Postives = 66/127 (51.97%), Query Frame = 0

Query: 13  RRLWRR-RRYQRL-GSGSTGPTRSRSFRL-------GRVWRMRRQVAPKLR-LKASSPLK 72
           +R WRR R Y++L GS  T   R +  R+        R WR++  + PKLR LK +SP K
Sbjct: 6   KRYWRRWRGYEKLDGSSETTSGRRKGKRVKMDPTRKKRFWRIK--IVPKLRILKTASPKK 65

Query: 73  VLAKIHDGYVEMMMRLANS--VGNM-YAIGAFGNRKRIPKPKNQVPLVSCGGEQVDAKLV 127
            L  + D YV+MMMRLANS  VG+  Y    FG+ +                ++ D K++
Sbjct: 66  FLVWLRDSYVKMMMRLANSRVVGSSGYGGSGFGSGQM---------------KEYDEKML 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022939174.12.3e-4977.94uncharacterized protein LOC111445168 [Cucurbita moschata][more]
XP_022993314.12.3e-4977.94uncharacterized protein LOC111489358 [Cucurbita maxima][more]
XP_011656247.15.2e-4980.29PREDICTED: uncharacterized protein LOC105435696 [Cucumis sativus] >KGN51531.1 hy... [more]
XP_008467181.12.0e-4880.15PREDICTED: uncharacterized protein LOC103504591 [Cucumis melo][more]
XP_022152306.13.3e-4877.61uncharacterized protein LOC111020054 [Momordica charantia][more]
Match NameE-valueIdentityDescription
tr|A0A0A0KV01|A0A0A0KV01_CUCSA3.4e-4980.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576730 PE=4 SV=1[more]
tr|A0A1S3CSX3|A0A1S3CSX3_CUCME1.3e-4880.15uncharacterized protein LOC103504591 OS=Cucumis melo OX=3656 GN=LOC103504591 PE=... [more]
tr|B9SJX2|B9SJX2_RICCO6.1e-2245.93Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0577330 PE=4 SV=1[more]
tr|V4TMF2|V4TMF2_9ROSI4.8e-1945.00Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017837mg PE=4 ... [more]
tr|M5Y1B9|M5Y1B9_PRUPE6.3e-1947.14Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G317700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT2G47485.16.3e-0935.61unknown protein[more]
AT3G62650.22.7e-0736.22unknown protein[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G006200.1Cla97C01G006200.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33702:SF2SUBFAMILY NOT NAMEDcoord: 1..134
NoneNo IPR availablePANTHERPTHR33702FAMILY NOT NAMEDcoord: 1..134

The following gene(s) are paralogous to this gene:

None