MELO3C005141 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005141
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	high chlorophyll fluorescence 153
Location	chr9 : 16527780 .. 16529807 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGTCCATTCCAATTCCATCAACTTCCAATACCCATGGCCAGGTTCCTTATCTCCACCCGACCCTTCCCCTTTTCCTCTCTCCCCCTTGCTCCCCCACGGGCATTCTTCAGACCCTTCACTTTTTCCCCGCCGGTCAGATTCTCCGCCCACCCATCGCCCTCCAGGACCTTACGAGTGGTGAAGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCCATCCCTTTATCTCTTATTCTCATCACTGTCCTCACCGCCCTTAAAATCGGCGATAACCTTGACAAGAAGTTTCTTGAGGAGGTAACTTCCATTCATCTAATTTCGCTTCATTTTGTTTGTGGAACTGGATTTTGGTGAGATTCTGGTGGTTTGCCGTTCAAGTTTGGTTTAAATAAGTTTACTTGAGCTTTGAAATGAGACTTTTATTGTACTGAGGTTTGTGTTTGATTTAATTAAGGCTACTGTCAACTGTTGAGGAATGTCACATTTGCTTATGTTTTACTGTTACAATATGTATGGTTGTTTTGTTTTATGGTTTTAGTCAATGGAGACATGGCTTGCCTTCTAACATGGTAGCACCTAAACTAGGATTGTGCAGTGTTTTATGAGTTTATTGAGGTCAAATATTACAGGATTGAGACATTGTTACCAAGATGCATTCAAGCTAGCTCTGCAAGAACTGATTTTACTTCCTTATCCATGGGGGTGATTGCTTTAATTTGTTAACCACACTTTCAAGTTCAATGGGATCAGAAAAAGGAGTGATACCCCCACGGCCCCACCCACGCTAAAGCTGCCCCCTTTGTTCATCAGTGCTCAAAAGCTTGTTTTTGTTGATTCATGGCCATTTGATTAGATGATCTCCCAATTGAATTGGATAATCTAGTATCAGTAAGCTCGAGAGAGGGCCTCATATGTCCTCAGTTCCCGCCAATTACCACTACCACTGAGCTCGAGAGAGGGTACCTTAAGGCCAGTTCTGAAAGACCACAAGGATGTTAAATGACTAGGCCATGGTTTATTAACCATTTAGTTTTTGAGAACTATGCTTTTTTTGTCACAACTTTTTTGTCTTTATCCTTCCTAGAGAAATATTTGAGTTATTATAGCCGACTTTCAAAACCAAAACATGTTTTTCAAAAATTAACTTGGACTTTAAAACTTAAAAAGTAGATAGCAGAAAAAACAAAATGAGATGTGAAAGTAATATTTATAAGCTTGGTTTTCAAAAACCCAGTTCTTCCCACCTTGGACACCCCATAGGCCTAATGTTCATAACTTATAGGTTTGCCATGTGTTAAAAGCCTAAATTAGGACTTTGAAGGCATCTCAAGTTATTCCCACCTTGATCACCTTGTAGACCTGCTGACCTTGCTTAAAGCAGGAATATTTTGGAAGCATTAGAATAGGGAGAGGAAGAAGATGGCAAACACCATCATGGATGTGTTTTCATGGAGCTTCACATAAATTCCACATTCTTATTATAAAAGAGCTGAAAAAAACACATAACATGTTTCATTTTTATGTATGGGGAACTGTTTCTTCAGGGAAATTGATTCCTATAATTGGGGAATCGGCACTGAGCCTTCTGTTGCATTTTGTTTGTGAAACAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGATTACGAAAAAGATGGTACAGAAATATCTTTTGAAGAAAAACCAACTCTTCCACGAACTCGAAATCGACCTAAAAGAGAAGCTGAGGTATAAATAAACTGCTTGCTTCTATTTTGGAGGTGTTCATATGATCGGATCAGGTGGCTGAGAAATGGTTCAAGGAACTAAGAAACTTCCATGTATATTGTATGTAATTTTTTTCCCCTTAATAAGGATTAGTTAAAAGTTAGTTGGAATGTTGAGTAACTTAGATATGTAATTATGTTATTGCATATTCTTCAAATTGAAATATCTTTCTAATGGCCTTGATTATGTTCATCATTCGCTAAAAATGTCATTAATGGTTCAAATTCAATTCTTAAATTTTT

mRNA sequence

AATGTCCATTCCAATTCCATCAACTTCCAATACCCATGGCCAGGTTCCTTATCTCCACCCGACCCTTCCCCTTTTCCTCTCTCCCCCTTGCTCCCCCACGGGCATTCTTCAGACCCTTCACTTTTTCCCCGCCGGTCAGATTCTCCGCCCACCCATCGCCCTCCAGGACCTTACGAGTGGTGAAGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCCATCCCTTTATCTCTTATTCTCATCACTGTCCTCACCGCCCTTAAAATCGGCGATAACCTTGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGATTACGAAAAAGATGGTACAGAAATATCTTTTGAAGAAAAACCAACTCTTCCACGAACTCGAAATCGACCTAAAAGAGAAGCTGAGGTATAAATAAACTGCTTGCTTCTATTTTGGAGGTGTTCATATGATCGGATCAGGTGGCTGAGAAATGGTTCAAGGAACTAAGAAACTTCCATGTATATTGTATGTAATTTTTTTCCCCTTAATAAGGATTAGTTAAAAGTTAGTTGGAATGTTGAGTAACTTAGATATGTAATTATGTTATTGCATATTCTTCAAATTGAAATATCTTTCTAATGGCCTTGATTATGTTCATCATTCGCTAAAAATGTCATTAATGGTTCAAATTCAATTCTTAAATTTTT

Coding sequence (CDS)

ATGGCCAGGTTCCTTATCTCCACCCGACCCTTCCCCTTTTCCTCTCTCCCCCTTGCTCCCCCACGGGCATTCTTCAGACCCTTCACTTTTTCCCCGCCGGTCAGATTCTCCGCCCACCCATCGCCCTCCAGGACCTTACGAGTGGTGAAGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCCATCCCTTTATCTCTTATTCTCATCACTGTCCTCACCGCCCTTAAAATCGGCGATAACCTTGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGATTACGAAAAAGATGGTACAGAAATATCTTTTGAAGAAAAACCAACTCTTCCACGAACTCGAAATCGACCTAAAAGAGAAGCTGAGGTATAA

Protein sequence

MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV*

Homology

[Close]

BLAST of MELO3C005141 vs. TrEMBL
Match: A0A0A0KTR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G440100 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.3e-60
Identity = 124/134 (92.54%), Postives = 128/134 (95.52%), Query Frame = 1


Query: 1   MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSY 60
           MARFLISTRPFPFS+LPLAPPR FFRP  FSPPVRF A+PSPSRTLRVV TRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEEKPT 120
           IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYE DG+EISFEEKPT
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYE-DGSEISFEEKPT 120

Query: 121 LPRTRNRPKREAEV 135
           +PRTRNRPKREAEV
Sbjct: 121 VPRTRNRPKREAEV 133

[Close]

BLAST of MELO3C005141 vs. TrEMBL
Match: M5X9K9_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026290mg PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-21
Identity = 62/120 (51.67%), Postives = 78/120 (65.00%), Query Frame = 1


Query: 12  PFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLI 71
           P S   L PP         SP  RFS+  +   T   V TRAG +T+ Y+FAF +PLSLI
Sbjct: 1   PSSRALLNPPHV-----PISPATRFSSRQARGLT---VVTRAGPTTNQYVFAFVMPLSLI 60

Query: 72  LITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEEKPTLPRTRNRPKRE 131
            +TV T+++I D LD++FLEE+A+NQAI E DED   D  ++  EEKP LPRTRNRPKRE
Sbjct: 61  AVTVFTSMRIADKLDEEFLEEIAINQAIRETDED---DEVDMPIEEKPALPRTRNRPKRE 109

[Close]

BLAST of MELO3C005141 vs. TrEMBL
Match: A0A061FLN0_THECC (High chlorophyll fluorescence 153, putative OS=Theobroma cacao GN=TCM_042381 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.3e-20
Identity = 71/144 (49.31%), Postives = 87/144 (60.42%), Query Frame = 1


Query: 1   MARFLISTRPFPFS-SLPLAPP--RAFFRPFTFSPP--VRFSAHPSPSRTLR--VVKTRA 60
           MA   I++    FS S+ L PP  R   RP     P  V FS+H    R  R   V TRA
Sbjct: 1   MASLSITSTISSFSPSVVLCPPVARTSSRPLGLPTPPAVAFSSHLYHHRKPRGLAVVTRA 60

Query: 61  GASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDED---YEKDG 120
           G +TSSY+FA   PLSL+ +T+ T++KI D LDK FLE+L +NQAI E DED    + D 
Sbjct: 61  GPNTSSYVFAVVFPLSLLAVTIFTSIKIADKLDKDFLEDLTINQAIREADEDDGGIDADD 120

Query: 121 TEISFE---EKPTLPRTRNRPKRE 132
            EIS E   ++P LPRTRNRPKRE
Sbjct: 121 DEISLEDIVQEPMLPRTRNRPKRE 144

[Close]

BLAST of MELO3C005141 vs. TrEMBL
Match: F6GX98_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01750 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.1e-20
Identity = 64/136 (47.06%), Postives = 87/136 (63.97%), Query Frame = 1


Query: 1   MARFLISTRPFPFSSLPLAPP---RAFFRPFTFSPPVRFSAHPSPSRTLRV-VKTRAGAS 60
           MA  +I  +P   + LPL+     RA       SP VRFS      +T  + V TRAG S
Sbjct: 1   MATVIIINKPPLATFLPLSKATITRASLH-LPISPAVRFSGELCRRKTRGLSVVTRAGPS 60

Query: 61  TSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFE 120
           TSSY+FAF  PLSL+ +T+ T+L++ D L+++FLEELA+N+A+ E DE  E+    I  E
Sbjct: 61  TSSYVFAFVFPLSLLAVTIFTSLRVDDKLEREFLEELAVNEAMREADE--EEGDVAIPVE 120

Query: 121 EKPTLPRTRNRPKREA 133
           ++P +PRTRNRPKREA
Sbjct: 121 KEPAVPRTRNRPKREA 133

[Close]

BLAST of MELO3C005141 vs. TrEMBL
Match: A0A059BJD7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03266 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 6.6e-20
Identity = 63/127 (49.61%), Postives = 77/127 (60.63%), Query Frame = 1


Query: 8   TRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVK--TRAGASTSSYIFAFS 67
           +RP P +  PL PP     P    P     A  +P R  R  +    AG S SSY+FAF 
Sbjct: 16  SRPPP-ARAPLGPPHVRVSPLVVFP----GAGGTPRRAGRGARLVALAGPSGSSYVFAFV 75

Query: 68  IPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEEKPTLPRTR 127
            PLSL+++TV  ++KI D LD+ FLEELA+NQAI + DE    D  E+S EEKP L RTR
Sbjct: 76  FPLSLLVVTVFASIKIADKLDRDFLEELAINQAIKDADEG---DDAEVSLEEKPVLSRTR 134

Query: 128 NRPKREA 133
           NRPKREA
Sbjct: 136 NRPKREA 134

[Close]

BLAST of MELO3C005141 vs. TAIR10
Match: AT4G31560.1 (AT4G31560.1 high chlorophyll fluorescence 153)

HSP 1 Score: 87.8 bits (216), Expect = 5.5e-18
Identity = 59/139 (42.45%), Postives = 79/139 (56.83%), Query Frame = 1


Query: 1   MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSP----SRTLR--VVKTRAG 60
           MAR  +S    P     ++ P +  +P    P   F+   +     +R +R   V TRAG
Sbjct: 1   MARLFVS---IPMQPTQISFPASSSQPLLSPPANNFTDGGAGGLCLTRRIRDSSVVTRAG 60

Query: 61  ASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAI--MEEDEDYEKDGTE 120
            STSSY+ AF+IP +LI  TV T++KI D LD+ FLE++ALNQAI   E+ E+ E D + 
Sbjct: 61  PSTSSYLLAFAIPATLIAATVFTSIKIADKLDEDFLEDIALNQAIKAAEKGENGEGDISL 120

Query: 121 ISFEEKPTLPRTRNRPKRE 132
               ++P L RTRNRPKRE
Sbjct: 121 DDVIQEPVLQRTRNRPKRE 136

[Close]

BLAST of MELO3C005141 vs. NCBI nr
Match: gi|659072486|ref|XP_008465810.1| (PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo])

HSP 1 Score: 265.4 bits (677), Expect = 5.5e-68
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1


Query: 1   MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSY 60
           MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEEKPT 120
           IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEEKPT
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEEKPT 120

Query: 121 LPRTRNRPKREAEV 135
           LPRTRNRPKREAEV
Sbjct: 121 LPRTRNRPKREAEV 134

[Close]

BLAST of MELO3C005141 vs. NCBI nr
Match: gi|449445051|ref|XP_004140287.1| (PREDICTED: uncharacterized protein LOC101209610 [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 1.9e-60
Identity = 124/134 (92.54%), Postives = 128/134 (95.52%), Query Frame = 1


Query: 1   MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSY 60
           MARFLISTRPFPFS+LPLAPPR FFRP  FSPPVRF A+PSPSRTLRVV TRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEEKPT 120
           IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYE DG+EISFEEKPT
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYE-DGSEISFEEKPT 120

Query: 121 LPRTRNRPKREAEV 135
           +PRTRNRPKREAEV
Sbjct: 121 VPRTRNRPKREAEV 133

[Close]

BLAST of MELO3C005141 vs. NCBI nr
Match: gi|645251101|ref|XP_008231524.1| (PREDICTED: uncharacterized protein LOC103330698 [Prunus mume])

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-23
Identity = 71/137 (51.82%), Postives = 87/137 (63.50%), Query Frame = 1


Query: 1   MARFLISTRPFPFSSLPLAPP----RAFFRP--FTFSPPVRFSAHPSPSRTLRVVKTRAG 60
           MAR LIS      +SL L+PP    RA   P     SP  RFS   +   T   V TRAG
Sbjct: 1   MARLLISNT----ASLTLSPPAPSSRALLNPPHVPISPATRFSCRQARGLT---VVTRAG 60

Query: 61  ASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEIS 120
            +T+ Y+FAF +PLSLI +TV T+++I D LD+ FLEE+A+NQAI E DED   D  ++ 
Sbjct: 61  PTTNQYVFAFVMPLSLIAVTVFTSMRIADKLDEDFLEEIAINQAIRETDED---DEVDMP 120

Query: 121 FEEKPTLPRTRNRPKRE 132
            EEKP LPRTRNRPKRE
Sbjct: 121 IEEKPALPRTRNRPKRE 127

[Close]

BLAST of MELO3C005141 vs. NCBI nr
Match: gi|694327062|ref|XP_009354412.1| (PREDICTED: uncharacterized protein LOC103945553 [Pyrus x bretschneideri])

HSP 1 Score: 115.9 bits (289), Expect = 5.4e-23
Identity = 72/134 (53.73%), Postives = 85/134 (63.43%), Query Frame = 1


Query: 1   MARFLIS-TRPFPFSSLPLAPPRAFFRP--FTFSPPVRFSAHPSPSRTLRVVKTRAGAST 60
           MAR LIS T     S  P  P RA F P     SP  RF    +  R L VV TRAG +T
Sbjct: 1   MARLLISNTASLTLSPPPAPPSRASFIPPHVPISPATRFPGRQT--RGLEVV-TRAGPTT 60

Query: 61  SSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEE 120
           S Y+FAF +PLSLI +TV T++++ D LD+ FLEE+A+NQAI E DE+ E D    S EE
Sbjct: 61  SQYVFAFVLPLSLIAVTVFTSIRVADKLDRDFLEEMAINQAIRETDEEGEADK---SIEE 120

Query: 121 KPTLPRTRNRPKRE 132
           KP L RTRNRPKRE
Sbjct: 121 KPALSRTRNRPKRE 128

[Close]

BLAST of MELO3C005141 vs. NCBI nr
Match: gi|694384373|ref|XP_009368089.1| (PREDICTED: uncharacterized protein LOC103957632 [Pyrus x bretschneideri])

HSP 1 Score: 113.6 bits (283), Expect = 2.7e-22
Identity = 70/133 (52.63%), Postives = 83/133 (62.41%), Query Frame = 1


Query: 1   MARFLIS-TRPFPFSSLPLAP-PRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTS 60
           MA+ LIS T     S  PLAP  RA F P    P    S +P        V TRAG +TS
Sbjct: 1   MAKLLISNTASLTLSPPPLAPLSRASFIPPRV-PITPASRYPGRQTRGLAVVTRAGPTTS 60

Query: 61  SYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEEK 120
            Y+FAF +PLSLI +TV T++++ D LD+ FLEE+A+NQAI E DED E D    S EE 
Sbjct: 61  QYVFAFVLPLSLIAVTVFTSIRVADKLDRDFLEEMAINQAIRETDEDGEADS---SIEEM 120

Query: 121 PTLPRTRNRPKRE 132
           P LPRTRNRPKRE
Sbjct: 121 PALPRTRNRPKRE 129

The following BLAST results are available for this feature:

BLAST of MELO3C005141 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTR1_CUCSA	1.3e-60	92.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G440100 PE=4 SV=1	[more]
M5X9K9_PRUPE	1.6e-21	51.67	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026290mg PE=4 S...	[more]
A0A061FLN0_THECC	2.3e-20	49.31	High chlorophyll fluorescence 153, putative OS=Theobroma cacao GN=TCM_042381 PE=...	[more]
F6GX98_VITVI	5.1e-20	47.06	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01750 PE=4 SV=...	[more]
A0A059BJD7_EUCGR	6.6e-20	49.61	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03266 PE=4 SV=1	[more]

BLAST of MELO3C005141 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G31560.1	5.5e-18	42.45	high chlorophyll fluorescence 153	[more]

BLAST of MELO3C005141 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072486\|ref\|XP_008465810.1\|	5.5e-68	100.00	PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo]	[more]
gi\|449445051\|ref\|XP_004140287.1\|	1.9e-60	92.54	PREDICTED: uncharacterized protein LOC101209610 [Cucumis sativus]	[more]
gi\|645251101\|ref\|XP_008231524.1\|	2.4e-23	51.82	PREDICTED: uncharacterized protein LOC103330698 [Prunus mume]	[more]
gi\|694327062\|ref\|XP_009354412.1\|	5.4e-23	53.73	PREDICTED: uncharacterized protein LOC103945553 [Pyrus x bretschneideri]	[more]
gi\|694384373\|ref\|XP_009368089.1\|	2.7e-22	52.63	PREDICTED: uncharacterized protein LOC103957632 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0010190	cytochrome b6f complex assembly
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0042651	thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU61075	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005141T1	MELO3C005141T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU61075	MU61075	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37753	FAMILY NOT NAMED	coord: 4..133 score: 3.2
None	No IPR available	PANTHER	PTHR37753:SF1	SUBFAMILY NOT NAMED	coord: 4..133 score: 3.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005141	Csa5G440100	Cucumber (Chinese Long) v2	cumeB363
MELO3C005141	Cla005898	Watermelon (97103) v1	mewmB030
MELO3C005141	ClCG01G007560	Watermelon (Charleston Gray)	mewcgB019
MELO3C005141	Cla97C01G007900	Watermelon (97103) v2	mewmbB009
MELO3C005141	Bhi12G000980	Wax gourd	mewgoB005
MELO3C005141	CSPI05G15530	Wild cucumber (PI 183967)	cpimeB353
MELO3C005141	Cucsa.335490	Cucumber (Gy14) v1	cgymeB548
MELO3C005141	CmaCh04G022010	Cucurbita maxima (Rimu)	cmameB635
MELO3C005141	CmoCh04G023040	Cucurbita moschata (Rifu)	cmomeB625
MELO3C005141	CmoCh15G008610	Cucurbita moschata (Rifu)	cmomeB240
MELO3C005141	Lsi09G008000	Bottle gourd (USVL1VR-Ls)	lsimeB013
MELO3C005141	Cp4.1LG13g06000	Cucurbita pepo (Zucchini)	cpemeB157
MELO3C005141	Cp4.1LG01g19090	Cucurbita pepo (Zucchini)	cpemeB359
MELO3C005141	CsGy5G015320	Cucumber (Gy14) v2	cgybmeB303
MELO3C005141	Carg01374	Silver-seed gourd	carmeB0821
MELO3C005141	Carg17734	Silver-seed gourd	carmeB0483
MELO3C005141	CsaV3_5G024570	Cucumber (Chinese Long) v3	cucmeB362

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C005141	Cucurbita maxima (Rimu)	cmameB252