CmaCh04G022010 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G022010
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
Descriptionhigh chlorophyll fluorescence 153
LocationCma_Chr04 : 15374920 .. 15377928 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGAAGGACGACAAAACAAGGGAAGAAGAGAGAAACGAGAACGTTATCAAAAATTCTCTTTTAATAGATAAAGGTATAATTTTGTTTCTTAACATGTTCTTATTCTTTCTTAAAAAGCTAAATCAATACCCTAATAGCGTATTTATAGAGAATTATGAACTCGAGATTACAAGAGGCCAAGCCGAATTTCATAAAAATGAACTTTGGTTATACATTATCATCACACGCATTTACATGACATCAAATTCAGCCTGCAAGAATGGCCAGTCCAATTCCTTACACGTCTGAAGCTATGGCCAGGCTCCTTATCTCCACCAGAGCCTTCCCCTTTCCGCTGGTTCCGGCACGAGCATTCTTCAGACCCTCCAAATTGTCGCCGGCGGTCAGATTCTCCGGCGACCCATCAGCCGCCAGAACCCTACGAGTGGTGACGACTCGTGCCGGTGCCAGCACCAGCAGTTACATCTTCGCTTTCTCTATCCCCTTTTCTCTTATTCTCGTCACTGCCCTTACCGCTCTCAAAATCGGTGATAACCTGGACAAGAAGTTTCTTGAGGAGGTACTTTGTGATTTGTTATTTTGCTCCATTTTGTTTGTGGGACTGAATTTTGTTGGGCGTTCTGGTTGGTTTCAGTTCATGTTTGGTTTAGATGAGCTTTCCTGCAATGTTGAGGCTTCTGTGATATTAATGCACATAACCTGTTTGTATTAATGCTTAGTGTTCTGGGAAATTATTTCTGCATATATTTTGATGTTAGAATTTGTATGGTTTATGGTTGAGCTAGCCTTTATGAAGTGTTGAGAAATTGTTCGTTACTATGATGCAATCAAGCTATCTCTTCATGTGCTAATTTTAACGCTAAGATTGTTCGTATGGAAGGATTGCTGTACTTTGTTAAGCACTCTCATTAGGTACAGTGATATCTGGTATCTGTAAAAAGGAGAGATACCCTATAATAGCCCAAACCAACTGCCAGCAAATATTGTTCTCTTGGGCTTTTCCTTTGTGCTTTCCCTCAAGGTTTTTAAAACACCTCTCCTAGGAAAAGGAATCTCACTATCTACCCTCCTTCAAGGCTCAACATTCTCGCTGGCACTCGTTCCCTTCTCTAATCGATGTGGGACTCCCCAATCCATCTCCTTTGAGGCCCAGTATCCTTGTTGGTACATCGCCTCGTGTCCATTCCCCTTCAAGGCTACCTTATTGCCGGCACATAGCCTGATGTCTGGCTCTGATACCATTTGTAACAGCTCAAACCCACTACTCTTCTTCAAGGCTCAGCGTTCTCGCTGGCACTCGTTCCCTTCTCCAATTGATGTGGGACTCCCCAATCCACCCCTTTGAGGCCCAGCATCCTTGTTGGCACACCCCCTCATGTCCACTCCCCTTCGAGGCTACCTTATTGCTGGCACATAGCTTGATGTCTGGCTCTGATACCATTTGTAATAATTCAAGCCCACCGCTAGCAAATATTGTCCTTTTTGGGCTTCCCCTTTCAGACTTCCCTTCAAGGTTTTTAAAACACAAGGCTAGGTAGAGGTTTTCACACCTTTATAAAGAATATTTGGTTTTCCTCCCAACCGATGTGGTCATCTCCAGCCACCCAAAAGTTGCCCTCTTTATGCATCAGTGATCAAAAGCTTGATTTTGTAGATTCATGGTCATTTGATTAGATGATCCCTCACTTGGATAATCTTGGAGGCCTCATTCCTTGCGTAGCAGACAAGTTTCAAGGAGTTTAAATTACTGTGTTCTCTAGGTGAGAGCTTGAACTTAGGACTTTGAAAGCATCTCAAAAACATTTTCAAGTCCTTTCCATCTTGGTCACCCCATAGACCTAGAACTACAAATAATCTAGGTATCGGAGACCTCATTCAAAAAATGGAATGATTAGTTGCACTTTCGATCTTGTTCTTAGCTTCGGGTCTGGTTCTTTAGGTGAGGCTCTTGACTTTATAAGGTGGTTCCCTTTATGGTTCAGGAATTCGTGCTTTGCTGACTTTTATTTGTTTGGTTACAGTTCATGCCCACTTGTAATGAACCCCCACTCGCTCCAACGTAGGGTAGAAAGCTCCTTAAACTGATTCAAGTGATTCAGTCAATAGGAAAGTCAGATGTCTCTCCTGCAAGCCAAAACATTGATTTTGTCTCGATGCGGTTCTCCCCAAAAGAGTGAGCGCTCACTCATATTATGGATCGCACCCCCTTTTTTCTTATTAGTAGGTTGCGATATCTCACTCATGAGGGGAGGTGGGAGAATGGGTTTTTTTGAATTGTGTATATTCTCACCGGTCACCACCACCACTAGTCTCAAGGGAGGCAGGGGTAGCCTACCATAAGAAAGGTGAATCTCATTGGATTTGAATTTAAGATAGATGAATCTCATTGTAGTCACGAACTTAGTACGTTGAAGGCATCTCATAACATCTCAAGCCGTCCCATCTTTGGTCGCCCCATAGAGTCTATTTAGAGCAGGAATGGCAAAATCCATAGGATGAGTTTGATCATGGCACTTCATTTCAAGGCCACATTCTTGTTATAGAAGAGATAAAAAGCCTTTTTATGCATGACAATCTGTTCTTGAGGGAAATTGATTCCTGAAACTGGGAAATAGACACTGATTTTGTTGAACTGTGTTTGTGAACCAGCTTGCTCTTAATCAAGCCATAATGGAGGAAGATGAAGAGAACAAAGATGGTAGTTCAGAAATCTCTTTTGAAGAAAAACCCGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCCTAGGTATAAATAGCAGCATAGATTTTGGATGTGAACATGATCGGATCAGACAGGCAGAAAAAATGGCTCAAAGGAACTAGAAAGCTTCTATGTATACTGTATGTAGCTTAGTTTTCTTCTTCTTCTTAATAATGATTAGTATAAAGTTAGTTTGTATGATGAGTGAATTTAATGTTTAATATTATTGTTATATATTCTTCAAATTGATATATTTTTAAAAAGCAAATAGTGGTTGATAA

mRNA sequence

AGAGAAGGACGACAAAACAAGGGAAGAAGAGAGAAACGAGAACGTTATCAAAAATTCTCTTTTAATAGATAAAGAGAATTATGAACTCGAGATTACAAGAGGCCAAGCCGAATTTCATAAAAATGAACTTTGGTTATACATTATCATCACACGCATTTACATGACATCAAATTCAGCCTGCAAGAATGGCCAGTCCAATTCCTTACACGTCTGAAGCTATGGCCAGGCTCCTTATCTCCACCAGAGCCTTCCCCTTTCCGCTGGTTCCGGCACGAGCATTCTTCAGACCCTCCAAATTGTCGCCGGCGGTCAGATTCTCCGGCGACCCATCAGCCGCCAGAACCCTACGAGTGGTGACGACTCGTGCCGGTGCCAGCACCAGCAGTTACATCTTCGCTTTCTCTATCCCCTTTTCTCTTATTCTCGTCACTGCCCTTACCGCTCTCAAAATCGGTGATAACCTGGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATAATGGAGGAAGATGAAGAGAACAAAGATGGTAGTTCAGAAATCTCTTTTGAAGAAAAACCCGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCCTAGGTATAAATAGCAGCATAGATTTTGGATGTGAACATGATCGGATCAGACAGGCAGAAAAAATGGCTCAAAGGAACTAGAAAGCTTCTATGTATACTGTATGTAGCTTAGTTTTCTTCTTCTTCTTAATAATGATTAGTATAAAGTTAGTTTGTATGATGAGTGAATTTAATGTTTAATATTATTGTTATATATTCTTCAAATTGATATATTTTTAAAAAGCAAATAGTGGTTGATAA

Coding sequence (CDS)

ATGGCCAGTCCAATTCCTTACACGTCTGAAGCTATGGCCAGGCTCCTTATCTCCACCAGAGCCTTCCCCTTTCCGCTGGTTCCGGCACGAGCATTCTTCAGACCCTCCAAATTGTCGCCGGCGGTCAGATTCTCCGGCGACCCATCAGCCGCCAGAACCCTACGAGTGGTGACGACTCGTGCCGGTGCCAGCACCAGCAGTTACATCTTCGCTTTCTCTATCCCCTTTTCTCTTATTCTCGTCACTGCCCTTACCGCTCTCAAAATCGGTGATAACCTGGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATAATGGAGGAAGATGAAGAGAACAAAGATGGTAGTTCAGAAATCTCTTTTGAAGAAAAACCCGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCCTAG

Protein sequence

MASPIPYTSEAMARLLISTRAFPFPLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA
Homology
[Close]
BLAST of CmaCh04G022010 vs. TrEMBL
Match: A0A0A0KTR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G440100 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.7e-45
Identity = 107/132 (81.06%), Postives = 113/132 (85.61%), Query Frame = 1 

Query: 12  MARLLISTRAFPF---PLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSY 71
           MAR LISTR FPF   PL P R FFRPS  SP VRF  +PS +RTLRVVTTRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60

Query: 72  IFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEEKPA 131
           IFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIMEEDE+ +DG SEISFEEKP 
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDG-SEISFEEKPT 120

Query: 132 LPRTRNRPKREA 141
           +PRTRNRPKREA
Sbjct: 121 VPRTRNRPKREA 131

[Close]
BLAST of CmaCh04G022010 vs. TrEMBL
Match: A0A0K9R2S2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113190 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.0e-19
Identity = 69/141 (48.94%), Postives = 90/141 (63.83%), Query Frame = 1 

Query: 1   MASPIPYTSEAMARLLISTRAFPFPLVPARAFFRPSKLSPAVRFSGDPSAARTLRV-VTT 60
           MA+    TS +++  L  T+       P    F  S  S AVRFSG+    R   V V T
Sbjct: 1   MAALSSITSNSLSPTLYPTQQ------PLHVAFPTSLRSSAVRFSGELDRRRMRGVSVIT 60

Query: 61  RAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSS 120
           RAG +T+ +IFAF  P SL+ +T +TAL+IGD L++KFLEELA+N+AI E +EEN DG+ 
Sbjct: 61  RAGPTTNQFIFAFVFPLSLLAITVVTALRIGDRLEQKFLEELAMNEAIREAEEENDDGTE 120

Query: 121 -EISFEEKPALPRTRNRPKRE 140
             I  +E+PALPR RNRPKRE
Sbjct: 121 VVIPRKEEPALPRARNRPKRE 135

[Close]
BLAST of CmaCh04G022010 vs. TrEMBL
Match: F6GX98_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01750 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.6e-19
Identity = 59/104 (56.73%), Postives = 78/104 (75.00%), Query Frame = 1 

Query: 38  LSPAVRFSGDPSAARTLRV-VTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKK 97
           +SPAVRFSG+    +T  + V TRAG STSSY+FAF  P SL+ VT  T+L++ D L+++
Sbjct: 32  ISPAVRFSGELCRRKTRGLSVVTRAGPSTSSYVFAFVFPLSLLAVTIFTSLRVDDKLERE 91

Query: 98  FLEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA 141
           FLEELA+N+A+ E DEE  +G   I  E++PA+PRTRNRPKREA
Sbjct: 92  FLEELAVNEAMREADEE--EGDVAIPVEKEPAVPRTRNRPKREA 133

[Close]
BLAST of CmaCh04G022010 vs. TrEMBL
Match: M5X9K9_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026290mg PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-18
Identity = 63/113 (55.75%), Postives = 78/113 (69.03%), Query Frame = 1 

Query: 29  ARAFFRPSK--LSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTA 88
           +RA   P    +SPA RFS     AR L VVT RAG +T+ Y+FAF +P SLI VT  T+
Sbjct: 3   SRALLNPPHVPISPATRFSS--RQARGLTVVT-RAGPTTNQYVFAFVMPLSLIAVTVFTS 62

Query: 89  LKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKRE 140
           ++I D LD++FLEE+A+NQAI E DE   D   ++  EEKPALPRTRNRPKRE
Sbjct: 63  MRIADKLDEEFLEEIAINQAIRETDE---DDEVDMPIEEKPALPRTRNRPKRE 109

[Close]
BLAST of CmaCh04G022010 vs. TrEMBL
Match: W9S4Q2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008627 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.4e-18
Identity = 61/116 (52.59%), Postives = 78/116 (67.24%), Query Frame = 1 

Query: 28  PARAFFRPSKL--SPAVRF--SGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTA 87
           P  A F+  +   SPA+RF       A R L VVT RAG  TSSY+ AF +PFSL+++T 
Sbjct: 20  PTTAAFKCHRFPASPAIRFPLKSRDRAQRGLSVVT-RAGPGTSSYVLAFVLPFSLVVITV 79

Query: 88  LTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKRE 140
           LT+++I D LD+ FLEE+ALN+AI E DEE ++G  E   E+ P  PRTRNRPKRE
Sbjct: 80  LTSIRIADKLDRDFLEEVALNEAIREADEEEEEGDYEFPLEQ-PTTPRTRNRPKRE 133

[Close]
BLAST of CmaCh04G022010 vs. TAIR10
Match: AT4G31560.1 (AT4G31560.1 high chlorophyll fluorescence 153)

HSP 1 Score: 82.0 bits (201), Expect = 3.1e-16
Identity = 60/137 (43.80%), Postives = 82/137 (59.85%), Query Frame = 1 

Query: 12  MARLLISTRAFPFPLVPARAFFRPSKLSPAVRFS--GDPSAARTLRV----VTTRAGAST 71
           MARL +S    P  +    +  +P    PA  F+  G      T R+    V TRAG ST
Sbjct: 1   MARLFVSIPMQPTQISFPASSSQPLLSPPANNFTDGGAGGLCLTRRIRDSSVVTRAGPST 60

Query: 72  SSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFE- 131
           SSY+ AF+IP +LI  T  T++KI D LD+ FLE++ALNQAI +  E+ ++G  +IS + 
Sbjct: 61  SSYLLAFAIPATLIAATVFTSIKIADKLDEDFLEDIALNQAI-KAAEKGENGEGDISLDD 120

Query: 132 --EKPALPRTRNRPKRE 140
             ++P L RTRNRPKRE
Sbjct: 121 VIQEPVLQRTRNRPKRE 136

[Close]
BLAST of CmaCh04G022010 vs. NCBI nr
Match: gi|449445051|ref|XP_004140287.1| (PREDICTED: uncharacterized protein LOC101209610 [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 6.8e-45
Identity = 107/132 (81.06%), Postives = 113/132 (85.61%), Query Frame = 1 

Query: 12  MARLLISTRAFPF---PLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSY 71
           MAR LISTR FPF   PL P R FFRPS  SP VRF  +PS +RTLRVVTTRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60

Query: 72  IFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEEKPA 131
           IFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIMEEDE+ +DG SEISFEEKP 
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDG-SEISFEEKPT 120

Query: 132 LPRTRNRPKREA 141
           +PRTRNRPKREA
Sbjct: 121 VPRTRNRPKREA 131

[Close]
BLAST of CmaCh04G022010 vs. NCBI nr
Match: gi|659072486|ref|XP_008465810.1| (PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo])

HSP 1 Score: 187.2 bits (474), Expect = 2.0e-44
Identity = 105/132 (79.55%), Postives = 110/132 (83.33%), Query Frame = 1 

Query: 12  MARLLISTRAFPF---PLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSY 71
           MAR LISTR FPF   PL P RAFFRP   SP VRFS  PS +RTLRVV TRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSY 60

Query: 72  IFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEEKPA 131
           IFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIMEEDE+ +   +EISFEEKP 
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEEKPT 120

Query: 132 LPRTRNRPKREA 141
           LPRTRNRPKREA
Sbjct: 121 LPRTRNRPKREA 132

[Close]
BLAST of CmaCh04G022010 vs. NCBI nr
Match: gi|694327062|ref|XP_009354412.1| (PREDICTED: uncharacterized protein LOC103945553 [Pyrus x bretschneideri])

HSP 1 Score: 111.7 bits (278), Expect = 1.0e-21
Identity = 75/134 (55.97%), Postives = 90/134 (67.16%), Query Frame = 1 

Query: 12  MARLLISTRAF----PFPLVPARAFFRPSK--LSPAVRFSGDPSAARTLRVVTTRAGAST 71
           MARLLIS  A     P P  P+RA F P    +SPA RF G  +  R L VVT RAG +T
Sbjct: 1   MARLLISNTASLTLSPPPAPPSRASFIPPHVPISPATRFPGRQT--RGLEVVT-RAGPTT 60

Query: 72  SSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEE 131
           S Y+FAF +P SLI VT  T++++ D LD+ FLEE+A+NQAI E DEE   G ++ S EE
Sbjct: 61  SQYVFAFVLPLSLIAVTVFTSIRVADKLDRDFLEEMAINQAIRETDEE---GEADKSIEE 120

Query: 132 KPALPRTRNRPKRE 140
           KPAL RTRNRPKRE
Sbjct: 121 KPALSRTRNRPKRE 128

[Close]
BLAST of CmaCh04G022010 vs. NCBI nr
Match: gi|694384373|ref|XP_009368089.1| (PREDICTED: uncharacterized protein LOC103957632 [Pyrus x bretschneideri])

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20
Identity = 73/135 (54.07%), Postives = 92/135 (68.15%), Query Frame = 1 

Query: 12  MARLLISTRAF----PFPLVP-ARAFFRPSK--LSPAVRFSGDPSAARTLRVVTTRAGAS 71
           MA+LLIS  A     P PL P +RA F P +  ++PA R+ G  +  R L VVT RAG +
Sbjct: 1   MAKLLISNTASLTLSPPPLAPLSRASFIPPRVPITPASRYPGRQT--RGLAVVT-RAGPT 60

Query: 72  TSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFE 131
           TS Y+FAF +P SLI VT  T++++ D LD+ FLEE+A+NQAI E DE   DG ++ S E
Sbjct: 61  TSQYVFAFVLPLSLIAVTVFTSIRVADKLDRDFLEEMAINQAIRETDE---DGEADSSIE 120

Query: 132 EKPALPRTRNRPKRE 140
           E PALPRTRNRPKRE
Sbjct: 121 EMPALPRTRNRPKRE 129

[Close]
BLAST of CmaCh04G022010 vs. NCBI nr
Match: gi|658023096|ref|XP_008346952.1| (PREDICTED: uncharacterized protein LOC103409952 [Malus domestica])

HSP 1 Score: 105.5 bits (262), Expect = 7.5e-20
Identity = 68/135 (50.37%), Postives = 86/135 (63.70%), Query Frame = 1 

Query: 12  MARLLISTRAF-----PFPLVPARAFFRPSK--LSPAVRFSGDPSAARTLRVVTTRAGAS 71
           MA+LLIS  A      P P  P+RA F P +  + PA R+ G  +       V TRAG +
Sbjct: 1   MAKLLISNXASLALSPPPPAPPSRASFIPPRVPIXPASRYPGRQTRGLA---VXTRAGPT 60

Query: 72  TSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFE 131
           TS Y+FAF +P SLI VT  T++++ D LD+ F+EE+A+NQAI E DE   DG +  S E
Sbjct: 61  TSQYVFAFVLPLSLIAVTVFTSIRVADKLDRDFJEEMAINQAIRETDE---DGEAXSSIE 120

Query: 132 EKPALPRTRNRPKRE 140
           E PALPRTRNRPKRE
Sbjct: 121 EMPALPRTRNRPKRE 129

The following BLAST results are available for this feature:
BLAST of CmaCh04G022010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh04G022010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTR1_CUCSA4.7e-4581.06Uncharacterized protein OS=Cucumis sativus GN=Csa_5G440100 PE=4 SV=1[more]
A0A0K9R2S2_SPIOL2.0e-1948.94Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113190 PE=4 SV=1[more]
F6GX98_VITVI2.6e-1956.73Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01750 PE=4 SV=... [more]
M5X9K9_PRUPE2.2e-1855.75Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026290mg PE=4 S... [more]
W9S4Q2_9ROSA8.4e-1852.59Uncharacterized protein OS=Morus notabilis GN=L484_008627 PE=4 SV=1[more]
BLAST of CmaCh04G022010 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G31560.13.1e-1643.80 high chlorophyll fluorescence 153[more]
BLAST of CmaCh04G022010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445051|ref|XP_004140287.1|6.8e-4581.06PREDICTED: uncharacterized protein LOC101209610 [Cucumis sativus][more]
gi|659072486|ref|XP_008465810.1|2.0e-4479.55PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo][more]
gi|694327062|ref|XP_009354412.1|1.0e-2155.97PREDICTED: uncharacterized protein LOC103945553 [Pyrus x bretschneideri][more]
gi|694384373|ref|XP_009368089.1|1.2e-2054.07PREDICTED: uncharacterized protein LOC103957632 [Pyrus x bretschneideri][more]
gi|658023096|ref|XP_008346952.1|7.5e-2050.37PREDICTED: uncharacterized protein LOC103409952 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0008150 biological_process
biological_process GO:0010190 cytochrome b6f complex assembly
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0042651 thylakoid membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G022010.1CmaCh04G022010.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37753FAMILY NOT NAMEDcoord: 12..140
score: 4.7
NoneNo IPR availablePANTHERPTHR37753:SF1SUBFAMILY NOT NAMEDcoord: 12..140
score: 4.7