Cp4.1LG01g19090 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g19090
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionHigh chlorophyll fluorescence 153, putative
LocationCp4.1LG01 : 16320138 .. 16323189 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACATATTATACTGATTCAAACGGCCATTAGAATTATGGCGAATTTGCTATCCATTACACCACACAAGTCCAATTCCTTACACGTCTGAAGCTATGGCCAGGCTCCTTATCTCCACCAGAGCCTTCCCCTTTCCCCCTCTTCCCCTGGTTCCGGCACGGGCATTCTTCAGACCCTCCAAATTGTCGCCGGCGGTCAGATTCTCCGGCGACCCATCAGCCGCCAGAGCCCTACGAGTGGTGACGACTCGTGCCGGTGCCAGCACCAGCAGTTACATCTTCGCTTTCTCTATCCCCTTTTCGCTTATTCTCGTCACTGCCCTTACCGCTCTCAAAATCGGTGATAACCTGGACAAGAAGTTTCTTGAGGAGGTACTTTGTGATTTGTTATTTTGCTCCATTTTGTTTGTGGGACTGAATTTTGTTGGGCGTTCTGGTTGGTTTCAGTTCATGTTTGGTTTAGATGAGCTTTTCTGCAATGTTGAGGCTTCTGTGATATTAATGCACATAACCTGTTTGTATTAATGCTTAGTGTTCAGGGAAATGATTTCTGCATATATTTTGATGTTAGAATTTGTATGGTTTATGGTTGAGCGAGCTTTCCTGCAATGTTAAGGCTTCTGTGATATTAATGCACATAACCTGTTTGTATTAATGCTTAGTGTTCTGGGAAATGATTTCTGCATATATTTTGATGTTAGAATTTGTATGGTTTATGGTTGAGCGAGCTTTCCTGCAATGTTAAGGCTTCTGTGATATTAATGCACATAACCTGTTTGTATTAATGCTTAGTGTTCTGGGAAATGATTTCTGCATATATTTTGATGTTAGAATTTGTATGGTTTATGGTTGAGCGAGCTTTCCTGCAATGTTAAGGCTTCTGTGATATTAATGCACATAACCTGTTTGTATTAATGCTTAGTGTTCTGGGAAATGATTTCTGCATATATTTTGATGTTAGAATTTGTATGGTTTATGGTTGAGCTAGCCTTTATGAAGTGTTGAGAAATTGTTCGTTACTATGATGAATTCAAGCAATCTCTTCATGTGCTACTTTTAATACTAAGATTGTTCTTATGGAGGGATTGCTGTACTTTGCTAAGCACTCTCATTAGGTCTAGTGATATCTGTAAAAAAGAGAGATAACCGCCCAAGCCCACCGCTACTCGATATTGTTCTCTTTGGGCTTTTACTTTCGGGCTTCTCCTCGGTTTTTAAAACGTGTCTGTTACGAAAAGGTTTTCACACCCTTAAGAATAATGCTCCGTTCTCCTCCCCAATCGATGTGGGGATCTCACAATCCACCCCCTTTAGAGTTCACCGTCCTCGCTGGCACTCGTTTCCTTCTCCAATCGATGTGGGACTCCCCAATCCACTCTTTCGAGGCCCAACGTCCTTGTTGGCAGACTGCCTCGTGTCTACCCCCTTCGGGGCTACCTCCTCGCTGGCACTTTGCCCAGTGTCTGGCTCTTATACCATTTGTAACAGCCCAAGCCCACCGCACATATATTGTCCTCTTTGGGCTTTCTCTTTCGAGCTTCCCCTCAAGGTTTCTAAAACGCGTCTGCTAGGGGGAGGTTTCCACACCCTTATAAAGAATGTTTTGTTTTCCTTCCCAACCGAGCTGGCATCTCACACCTCCAGCCACCCAAAAGTTGCCTTTTTGTATATTCATGGCCATTTGATTTGATGATCCCTCACTTGGATAATCTTGGAGGCCTCATTCCTTGAGTAGCAGGCAAGTTTCAAGAAGTTTAAATTACTATGTTCTCTAGGTGAGAGCTTGAACTTAGGACTTTGAAAGCATCTCAAAAACATTTCAAAGTCCTTTCCATCTTGGTCACCCCATAGACCTAGAACTACAAATAATCTAGGTATCGGAGGCCTCATTCAAAAAATGGAATGAGTAGTTGCGCTTTCGATCTTGTTCTCAGCTCTGGGTCTGGTCCTTTAGGCGAGGCTCTTGACTTTACAAAGTGGTTCCCTTTATGGTTCAGGAATTCGTGCTTGGCTGACTTTTATTTGTTTGGTTATAGTTCGTGCCCACTTGTAATGAACCCCCACCCGCCCCAACGTAGAGTAGAAACCTCCTTAAACTGATTCAAGTGATTCAGTCCGTAGGAAAGTCAGATGTCTCTCTTGCAAGCCAAAACATTGATTTTGTCTCGATGCGGTTCTTCCCAAAAGAGTGAGCGCTCACCCATATTATGGAGCGCACCCCCTTTTTTCTTATTAGTAGGTTGCGAAATCTCACCTTTCGAAAATCTCTCATAAGGAGAGGTGGGAGTATGGGCTTTTTTGAATTGTGTATATTCTCACCGGTCACCACCACCACTAGTCTCAAGGGAGGCAGGGGTAGCCTACCATGATGAGTAAACAAACAGAATTTTCAAAAACCAAAAACTAAAAATCAAATAGTCGTCGAACGAGGCATAAGTTTTCCACGTAAGAGCACGAACTTAGTACGTTGAAGGCATCCAATAACATTTCAAGCCGTCCCCATCTTTGGTCGCCCCATAGAGTCTATTTAGAGCAGGAATAGCAAAATCCATAGGATGAGTTTGATCATGGCACTTCATTTCAAGGCCACATTCTTGTTATAGAAGAGATATAAAGCCTTTTTATGCATAATAATCTGTTCTTGAGGGAAATTGATTCCTGAAACTGGGAAATAGACACTGATTTTGTTGAACTGTGTTTGTGAACCAGCTTGCTCTTAATCAAGCCATAATGGAGGAAGATGAAGAGAACAAAGATGGTAGTTCAGAAATCTCTTTCGAAGAAAAACCCGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCCGAGGTATAAATAGCAGCATAGATTTTGGATGTGAACATGATCGGATCAGACAGGCAGAAAAAATGGCTCAAAGGAACTAGAAAGCTTCTATGTATACTGTATGTAACTTAGTTTTCTTCATCTTCTTCTTAATAATGATTAGTATACAGTTAGTCTGTATGATGAGTGTATTTAATACTTAATATTATTGTTATATATTCTTCATATTGAATTATTTTAAAAAAGC

mRNA sequence

AACATATTATACTGATTCAAACGGCCATTAGAATTATGGCGAATTTGCTATCCATTACACCACACAAGTCCAATTCCTTACACGTCTGAAGCTATGGCCAGGCTCCTTATCTCCACCAGAGCCTTCCCCTTTCCCCCTCTTCCCCTGGTTCCGGCACGGGCATTCTTCAGACCCTCCAAATTGTCGCCGGCGGTCAGATTCTCCGGCGACCCATCAGCCGCCAGAGCCCTACGAGTGGTGACGACTCGTGCCGGTGCCAGCACCAGCAGTTACATCTTCGCTTTCTCTATCCCCTTTTCGCTTATTCTCGTCACTGCCCTTACCGCTCTCAAAATCGGTGATAACCTGGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATAATGGAGGAAGATGAAGAGAACAAAGATGGTAGTTCAGAAATCTCTTTCGAAGAAAAACCCGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCCGAGGTATAAATAGCAGCATAGATTTTGGATGTGAACATGATCGGATCAGACAGGCAGAAAAAATGGCTCAAAGGAACTAGAAAGCTTCTATGTATACTGTATGTAACTTAGTTTTCTTCATCTTCTTCTTAATAATGATTAGTATACAGTTAGTCTGTATGATGAGTGTATTTAATACTTAATATTATTGTTATATATTCTTCATATTGAATTATTTTAAAAAAGC

Coding sequence (CDS)

ATGGCCAGGCTCCTTATCTCCACCAGAGCCTTCCCCTTTCCCCCTCTTCCCCTGGTTCCGGCACGGGCATTCTTCAGACCCTCCAAATTGTCGCCGGCGGTCAGATTCTCCGGCGACCCATCAGCCGCCAGAGCCCTACGAGTGGTGACGACTCGTGCCGGTGCCAGCACCAGCAGTTACATCTTCGCTTTCTCTATCCCCTTTTCGCTTATTCTCGTCACTGCCCTTACCGCTCTCAAAATCGGTGATAACCTGGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATAATGGAGGAAGATGAAGAGAACAAAGATGGTAGTTCAGAAATCTCTTTCGAAGAAAAACCCGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCCGAGGTATAA

Protein sequence

MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
Homology
[Close]
BLAST of Cp4.1LG01g19090 vs. TrEMBL
Match: A0A0A0KTR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G440100 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 4.8e-47
Identity = 109/134 (81.34%), Postives = 115/134 (85.82%), Query Frame = 1 

Query: 1   MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSY 60
           MAR LISTR FPF  LPL P R FFRPS  SP VRF  +PS +R LRVVTTRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60

Query: 61  IFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEEKPA 120
           IFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIMEEDE+ +DG SEISFEEKP 
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDG-SEISFEEKPT 120

Query: 121 LPRTRNRPKREAEV 135
           +PRTRNRPKREAEV
Sbjct: 121 VPRTRNRPKREAEV 133

[Close]
BLAST of Cp4.1LG01g19090 vs. TrEMBL
Match: A0A0K9R2S2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113190 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.5e-19
Identity = 63/114 (55.26%), Postives = 79/114 (69.30%), Query Frame = 1 

Query: 20  PARAFFRPSKLSPAVRFSGDPSAARALRV-VTTRAGASTSSYIFAFSIPFSLILVTALTA 79
           P    F  S  S AVRFSG+    R   V V TRAG +T+ +IFAF  P SL+ +T +TA
Sbjct: 22  PLHVAFPTSLRSSAVRFSGELDRRRMRGVSVITRAGPTTNQFIFAFVFPLSLLAITVVTA 81

Query: 80  LKIGDNLDKKFLEELALNQAIMEEDEENKDGSS-EISFEEKPALPRTRNRPKRE 132
           L+IGD L++KFLEELA+N+AI E +EEN DG+   I  +E+PALPR RNRPKRE
Sbjct: 82  LRIGDRLEQKFLEELAMNEAIREAEEENDDGTEVVIPRKEEPALPRARNRPKRE 135

[Close]
BLAST of Cp4.1LG01g19090 vs. TrEMBL
Match: F6GX98_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01750 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.5e-19
Identity = 61/105 (58.10%), Postives = 78/105 (74.29%), Query Frame = 1 

Query: 30  LSPAVRFSGD--PSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDK 89
           +SPAVRFSG+      R L VVT RAG STSSY+FAF  P SL+ VT  T+L++ D L++
Sbjct: 32  ISPAVRFSGELCRRKTRGLSVVT-RAGPSTSSYVFAFVFPLSLLAVTIFTSLRVDDKLER 91

Query: 90  KFLEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA 133
           +FLEELA+N+A+ E DEE  +G   I  E++PA+PRTRNRPKREA
Sbjct: 92  EFLEELAVNEAMREADEE--EGDVAIPVEKEPAVPRTRNRPKREA 133

[Close]
BLAST of Cp4.1LG01g19090 vs. TrEMBL
Match: M5X9K9_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026290mg PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-18
Identity = 63/113 (55.75%), Postives = 78/113 (69.03%), Query Frame = 1 

Query: 21  ARAFFRPSK--LSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTA 80
           +RA   P    +SPA RFS     AR L VVT RAG +T+ Y+FAF +P SLI VT  T+
Sbjct: 3   SRALLNPPHVPISPATRFSS--RQARGLTVVT-RAGPTTNQYVFAFVMPLSLIAVTVFTS 62

Query: 81  LKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKRE 132
           ++I D LD++FLEE+A+NQAI E DE   D   ++  EEKPALPRTRNRPKRE
Sbjct: 63  MRIADKLDEEFLEEIAINQAIRETDE---DDEVDMPIEEKPALPRTRNRPKRE 109

[Close]
BLAST of Cp4.1LG01g19090 vs. TrEMBL
Match: W9S4Q2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008627 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.7e-18
Identity = 61/116 (52.59%), Postives = 78/116 (67.24%), Query Frame = 1 

Query: 20  PARAFFRPSKL--SPAVRF--SGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTA 79
           P  A F+  +   SPA+RF       A R L VVT RAG  TSSY+ AF +PFSL+++T 
Sbjct: 20  PTTAAFKCHRFPASPAIRFPLKSRDRAQRGLSVVT-RAGPGTSSYVLAFVLPFSLVVITV 79

Query: 80  LTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKRE 132
           LT+++I D LD+ FLEE+ALN+AI E DEE ++G  E   E+ P  PRTRNRPKRE
Sbjct: 80  LTSIRIADKLDRDFLEEVALNEAIREADEEEEEGDYEFPLEQ-PTTPRTRNRPKRE 133

[Close]
BLAST of Cp4.1LG01g19090 vs. TAIR10
Match: AT4G31560.1 (AT4G31560.1 high chlorophyll fluorescence 153)

HSP 1 Score: 80.5 bits (197), Expect = 8.8e-16
Identity = 61/140 (43.57%), Postives = 83/140 (59.29%), Query Frame = 1 

Query: 1   MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFS----GDPSAARALR--VVTTRAG 60
           MARL +S    P  P  +    +  +P    PA  F+    G     R +R   V TRAG
Sbjct: 1   MARLFVS---IPMQPTQISFPASSSQPLLSPPANNFTDGGAGGLCLTRRIRDSSVVTRAG 60

Query: 61  ASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEIS 120
            STSSY+ AF+IP +LI  T  T++KI D LD+ FLE++ALNQAI +  E+ ++G  +IS
Sbjct: 61  PSTSSYLLAFAIPATLIAATVFTSIKIADKLDEDFLEDIALNQAI-KAAEKGENGEGDIS 120

Query: 121 FE---EKPALPRTRNRPKRE 132
            +   ++P L RTRNRPKRE
Sbjct: 121 LDDVIQEPVLQRTRNRPKRE 136

[Close]
BLAST of Cp4.1LG01g19090 vs. NCBI nr
Match: gi|449445051|ref|XP_004140287.1| (PREDICTED: uncharacterized protein LOC101209610 [Cucumis sativus])

HSP 1 Score: 195.3 bits (495), Expect = 6.9e-47
Identity = 109/134 (81.34%), Postives = 115/134 (85.82%), Query Frame = 1 

Query: 1   MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSY 60
           MAR LISTR FPF  LPL P R FFRPS  SP VRF  +PS +R LRVVTTRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60

Query: 61  IFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEEKPA 120
           IFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIMEEDE+ +DG SEISFEEKP 
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDG-SEISFEEKPT 120

Query: 121 LPRTRNRPKREAEV 135
           +PRTRNRPKREAEV
Sbjct: 121 VPRTRNRPKREAEV 133

[Close]
BLAST of Cp4.1LG01g19090 vs. NCBI nr
Match: gi|659072486|ref|XP_008465810.1| (PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo])

HSP 1 Score: 194.1 bits (492), Expect = 1.5e-46
Identity = 107/134 (79.85%), Postives = 112/134 (83.58%), Query Frame = 1 

Query: 1   MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSY 60
           MAR LISTR FPF  LPL P RAFFRP   SP VRFS  PS +R LRVV TRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSY 60

Query: 61  IFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEEKPA 120
           IFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIMEEDE+ +   +EISFEEKP 
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEEKPT 120

Query: 121 LPRTRNRPKREAEV 135
           LPRTRNRPKREAEV
Sbjct: 121 LPRTRNRPKREAEV 134

[Close]
BLAST of Cp4.1LG01g19090 vs. NCBI nr
Match: gi|694327062|ref|XP_009354412.1| (PREDICTED: uncharacterized protein LOC103945553 [Pyrus x bretschneideri])

HSP 1 Score: 114.0 bits (284), Expect = 2.0e-22
Identity = 75/134 (55.97%), Postives = 91/134 (67.91%), Query Frame = 1 

Query: 1   MARLLIS-TRAFPFPPLPLVPARAFFRPSK--LSPAVRFSGDPSAARALRVVTTRAGAST 60
           MARLLIS T +    P P  P+RA F P    +SPA RF G  +  R L VVT RAG +T
Sbjct: 1   MARLLISNTASLTLSPPPAPPSRASFIPPHVPISPATRFPGRQT--RGLEVVT-RAGPTT 60

Query: 61  SSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEE 120
           S Y+FAF +P SLI VT  T++++ D LD+ FLEE+A+NQAI E DEE   G ++ S EE
Sbjct: 61  SQYVFAFVLPLSLIAVTVFTSIRVADKLDRDFLEEMAINQAIRETDEE---GEADKSIEE 120

Query: 121 KPALPRTRNRPKRE 132
           KPAL RTRNRPKRE
Sbjct: 121 KPALSRTRNRPKRE 128

[Close]
BLAST of Cp4.1LG01g19090 vs. NCBI nr
Match: gi|694384373|ref|XP_009368089.1| (PREDICTED: uncharacterized protein LOC103957632 [Pyrus x bretschneideri])

HSP 1 Score: 109.8 bits (273), Expect = 3.8e-21
Identity = 71/135 (52.59%), Postives = 91/135 (67.41%), Query Frame = 1 

Query: 1   MARLLIS-TRAFPFPPLPLVP-ARAFFRPSK--LSPAVRFSGDPSAARALRVVTTRAGAS 60
           MA+LLIS T +    P PL P +RA F P +  ++PA R+ G  +   A   V TRAG +
Sbjct: 1   MAKLLISNTASLTLSPPPLAPLSRASFIPPRVPITPASRYPGRQTRGLA---VVTRAGPT 60

Query: 61  TSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFE 120
           TS Y+FAF +P SLI VT  T++++ D LD+ FLEE+A+NQAI E DE   DG ++ S E
Sbjct: 61  TSQYVFAFVLPLSLIAVTVFTSIRVADKLDRDFLEEMAINQAIRETDE---DGEADSSIE 120

Query: 121 EKPALPRTRNRPKRE 132
           E PALPRTRNRPKRE
Sbjct: 121 EMPALPRTRNRPKRE 129

[Close]
BLAST of Cp4.1LG01g19090 vs. NCBI nr
Match: gi|658023096|ref|XP_008346952.1| (PREDICTED: uncharacterized protein LOC103409952 [Malus domestica])

HSP 1 Score: 108.6 bits (270), Expect = 8.5e-21
Identity = 70/135 (51.85%), Postives = 88/135 (65.19%), Query Frame = 1 

Query: 1   MARLLISTRAFPF--PPLPLVPARAFFRPSK--LSPAVRFSGDPSAARALRVVTTRAGAS 60
           MA+LLIS  A     PP P  P+RA F P +  + PA R+ G  +   A   V TRAG +
Sbjct: 1   MAKLLISNXASLALSPPPPAPPSRASFIPPRVPIXPASRYPGRQTRGLA---VXTRAGPT 60

Query: 61  TSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFE 120
           TS Y+FAF +P SLI VT  T++++ D LD+ F+EE+A+NQAI E DE   DG +  S E
Sbjct: 61  TSQYVFAFVLPLSLIAVTVFTSIRVADKLDRDFJEEMAINQAIRETDE---DGEAXSSIE 120

Query: 121 EKPALPRTRNRPKRE 132
           E PALPRTRNRPKRE
Sbjct: 121 EMPALPRTRNRPKRE 129

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g19090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g19090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTR1_CUCSA4.8e-4781.34Uncharacterized protein OS=Cucumis sativus GN=Csa_5G440100 PE=4 SV=1[more]
A0A0K9R2S2_SPIOL2.5e-1955.26Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113190 PE=4 SV=1[more]
F6GX98_VITVI5.5e-1958.10Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01750 PE=4 SV=... [more]
M5X9K9_PRUPE1.2e-1855.75Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026290mg PE=4 S... [more]
W9S4Q2_9ROSA4.7e-1852.59Uncharacterized protein OS=Morus notabilis GN=L484_008627 PE=4 SV=1[more]
BLAST of Cp4.1LG01g19090 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G31560.18.8e-1643.57 high chlorophyll fluorescence 153[more]
BLAST of Cp4.1LG01g19090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445051|ref|XP_004140287.1|6.9e-4781.34PREDICTED: uncharacterized protein LOC101209610 [Cucumis sativus][more]
gi|659072486|ref|XP_008465810.1|1.5e-4679.85PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo][more]
gi|694327062|ref|XP_009354412.1|2.0e-2255.97PREDICTED: uncharacterized protein LOC103945553 [Pyrus x bretschneideri][more]
gi|694384373|ref|XP_009368089.1|3.8e-2152.59PREDICTED: uncharacterized protein LOC103957632 [Pyrus x bretschneideri][more]
gi|658023096|ref|XP_008346952.1|8.5e-2151.85PREDICTED: uncharacterized protein LOC103409952 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0008150 biological_process
biological_process GO:0010190 cytochrome b6f complex assembly
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0042651 thylakoid membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g19090.1Cp4.1LG01g19090.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37753FAMILY NOT NAMEDcoord: 2..133
score: 1.3