CmoCh04G023040 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G023040
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	high chlorophyll fluorescence 153
Location	Cmo_Chr04 : 17138243 .. 17140813 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCATTTACATGACATCAAATTCAGCTTACAAGAATGGCCAGTCCAATTCCTTACACGTCTGAAGCTATGGCCAGGCTCCTTATCTCCACCAGAGCCTTCCCCTTTCCCCCTCTTCCCCTGGTTCCGGCACGGGCATTCTTCAGACCCTCCAAATTGTCGCCGGCGGTCAGATTCTCCGGCGACCCATCAGCCGCCAGAGCCCTACGAGTGGTGACGACTCGTGCCGGTGCCAGCACCAGCAGTTACATCTTCGCTTTCTCTATCCCCTTTTCTCTTATTCTCGTCACTGCCCTTACCGCTCTCAAAATCGGTGATAACCTGGACAAGAAGTTTCTTGAGGAGGTACTTTGTGATTTGTTATTTCGCTCCATTTTGTTTGTGGGACTGAATTTTGTTGGGCGTTCTGGTTGGTTTCAGTTCATGTTTGGTTTAGATGTGCTTTCCTGCAATGTTGAGGCTTCTGTGATATTAATGCACATAACCTGTTTGTATTAATGCTTAGTATTCAGGGAAATGATTTCTGCATATATTTTGATGTTAGAATTTGTATGGTTTATGGTTGAGCTAGCCTTTATGAAGTGTTGAGAAATTGTTCGTTACTATGATGCATTCAAGCTATCTCTTCATGTGCTAATTTTAATACTAAGATTGTTCTTATGGAGGGATTGCTGTACTTTGTTAAGCACTCTCATTATGTATTGTGATATCGGTAAAAAAGGAGAGATGTTCTCCTACCCAATGATCTCACAATCCACCCCCCTTTAGGGCTCAACGTCCTTGCTGACACTCGTTCCCTACTCCAATCGATGTGGGACTCCCCAATTCACCCCCTTCGAGGCCTGACGTTCTTGCTGGCACACTGCCTTGTGTCCACTTCCTTTAGGGCTACCTCCTTGCTGGCACATCGCCCGATGTCTGGTTTTGATACCATTTGTAACAGTCCAAGCCCACCGCTAGCAGATATTGTTCTCGGGCTTTCCGTTTTGAGCTTCCCCTCAAGTTTTTAAAACACGTATGGTAGGGAGATGTTTCTACACTCTTATAAAGAATGTTCCGTTCTCCTCCCCAACTAACGCAGGATCTCACACCTCCAGACACCCAAAAGTTGCCTTCTTTGAGCATCAGCGATCAAAAGCTTTATTTTGTAGATTCATGGCCATTTGATTAGATGATCAGTCACTTGGATAATCTTGGAGGCCTCATTCCTTGTGTAGCAGGGAAGTTCCAAGGAGTTTAATTTTCCATGTTCTCTAGGCGAGAGCTTGAACTTAGGACATTGAAAGCATCTCAAAACATTTCAAAGTTCTTTCCATCTTGGTCACCCCATAGACCTAGAACTACAAATAATCTCGGTATCGGAGGCCTCATTCAAAAAATCGATTGAGAAGTTGCGCTTTCGATCTTGTTCTCAGCTCCGGGTTTGGTTTTTTAGGCGAGGCTCTTGACTTTACAGGGTGGTTCTCGTTCAGGAATTTGTGGTTAGCTGTTTGGTTATACTTCATGCCCACTCGTCATGAACCCCCGCCCGTGTGGACATGGAGTCGCAACTCTTCTTATAGGAATCTTCTTCAACTGATTCAAGTGATTCAGCTAGTTAGAGAAGTCAGATACCTCTCTTGCAGGCTGAAACATTGATTTTGTTTTGATGCGACTCTTCCCAAAAGAGTGAGCGCTCACTCTTATAATGGGGCACATCCCCTTTTTTCTTATTAGTTAGATAAGTTGCGAAATCTCACCTTTTGAAAATCTCTCATTAGGGAGAGTGGGAGTATAGGTTCTTTTGAATCGTGTATATTCTCACCGGTCACCACCATCACTAATCTCAAGGGAGGCAGGGGTAGCCTACCATAAGAAAGATGAATCTCATTGTCTAAGAATTCAAATTCAAATGTTTTCTTCTTTTAAAGAAAGATGAATCTCATTGCAGAGAAATGACGAATGAACGAACGGAATCTTCAAAAAATCAAATAGTTGTCAAACGAGGCATAAGTTTTCCATGTGAGAGCACGAACTTAAGACATCGAAGGCATCTCATAACATTTCAAGTCGTTCCCACCTTGGTCGTCCCATAGAGCCTATTTAGAGCAGGAATATTCTGAAAGCTTGGTTCCTTTTTATGCATAGTAATCTGTTTTGTGAGGGAAATTGATTCCTGAAACTGGGAAATAGACACTGATTTTGTTGAACTGTGTTTGTGAACCAGCTTGCTCTTAATCAAGCCATAATGGAGGAAGATGAAGAGAACAAAGATGGTAGTTCAGAAATCCCTTTCGAAGAAAAACCCGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCCGAGGCCTAAATAGCAGCATAGATTTTGGATGTGAACATAATCGGATCAGACAGGCAGAAAAATGGCTCAAAGGAACTAGAAAGCTTCTATGTATACTGTATGTTACTTAGTTTTCTTCATCTTCTTCTTAATCATGATTAGTATAAAGTTAGTTTGTATGGTGAGTGAATTTAATGTTTAATATTATTGTTATATATCCTTCAAATTGAAATATTTTCAAAAAGCAAATAGGGGGTATTATCTTAA

mRNA sequence

ACCCATTTACATGACATCAAATTCAGCTTACAAGAATGGCCAGTCCAATTCCTTACACGTCTGAAGCTATGGCCAGGCTCCTTATCTCCACCAGAGCCTTCCCCTTTCCCCCTCTTCCCCTGGTTCCGGCACGGGCATTCTTCAGACCCTCCAAATTGTCGCCGGCGGTCAGATTCTCCGGCGACCCATCAGCCGCCAGAGCCCTACGAGTGGTGACGACTCGTGCCGGTGCCAGCACCAGCAGTTACATCTTCGCTTTCTCTATCCCCTTTTCTCTTATTCTCGTCACTGCCCTTACCGCTCTCAAAATCGGTGATAACCTGGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATAATGGAGGAAGATGAAGAGAACAAAGATGGTAGTTCAGAAATCCCTTTCGAAGAAAAACCCGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCCGAGGCCTAAATAGCAGCATAGATTTTGGATGTGAACATAATCGGATCAGACAGGCAGAAAAATGGCTCAAAGGAACTAGAAAGCTTCTATGTATACTGTATGTTACTTAGTTTTCTTCATCTTCTTCTTAATCATGATTAGTATAAAGTTAGTTTGTATGGTGAGTGAATTTAATGTTTAATATTATTGTTATATATCCTTCAAATTGAAATATTTTCAAAAAGCAAATAGGGGGTATTATCTTAA

Coding sequence (CDS)

ATGGCCAGTCCAATTCCTTACACGTCTGAAGCTATGGCCAGGCTCCTTATCTCCACCAGAGCCTTCCCCTTTCCCCCTCTTCCCCTGGTTCCGGCACGGGCATTCTTCAGACCCTCCAAATTGTCGCCGGCGGTCAGATTCTCCGGCGACCCATCAGCCGCCAGAGCCCTACGAGTGGTGACGACTCGTGCCGGTGCCAGCACCAGCAGTTACATCTTCGCTTTCTCTATCCCCTTTTCTCTTATTCTCGTCACTGCCCTTACCGCTCTCAAAATCGGTGATAACCTGGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATAATGGAGGAAGATGAAGAGAACAAAGATGGTAGTTCAGAAATCCCTTTCGAAGAAAAACCCGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCCGAGGCCTAA

Homology

[Close]

BLAST of CmoCh04G023040 vs. TrEMBL
Match: A0A0A0KTR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G440100 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 7.5e-46
Identity = 107/133 (80.45%), Postives = 113/133 (84.96%), Query Frame = 1


Query: 12  MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSY 71
           MAR LISTR FPF  LPL P R FFRPS  SP VRF  +PS +R LRVVTTRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60

Query: 72  IFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEIPFEEKPA 131
           IFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIMEEDE+ +DG SEI FEEKP 
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDG-SEISFEEKPT 120

Query: 132 LPRTRNRPKREAE 145
           +PRTRNRPKREAE
Sbjct: 121 VPRTRNRPKREAE 132

[Close]

BLAST of CmoCh04G023040 vs. TrEMBL
Match: A0A0K9R2S2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113190 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.2e-20
Identity = 64/114 (56.14%), Postives = 80/114 (70.18%), Query Frame = 1


Query: 31  PARAFFRPSKLSPAVRFSGDPSAARALRV-VTTRAGASTSSYIFAFSIPFSLILVTALTA 90
           P    F  S  S AVRFSG+    R   V V TRAG +T+ +IFAF  P SL+ +T +TA
Sbjct: 22  PLHVAFPTSLRSSAVRFSGELDRRRMRGVSVITRAGPTTNQFIFAFVFPLSLLAITVVTA 81

Query: 91  LKIGDNLDKKFLEELALNQAIMEEDEENKDGSS-EIPFEEKPALPRTRNRPKRE 143
           L+IGD L++KFLEELA+N+AI E +EEN DG+   IP +E+PALPR RNRPKRE
Sbjct: 82  LRIGDRLEQKFLEELAMNEAIREAEEENDDGTEVVIPRKEEPALPRARNRPKRE 135

[Close]

BLAST of CmoCh04G023040 vs. TrEMBL
Match: F6GX98_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01750 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 7.1e-20
Identity = 62/105 (59.05%), Postives = 79/105 (75.24%), Query Frame = 1


Query: 41  LSPAVRFSGD--PSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDK 100
           +SPAVRFSG+      R L VVT RAG STSSY+FAF  P SL+ VT  T+L++ D L++
Sbjct: 32  ISPAVRFSGELCRRKTRGLSVVT-RAGPSTSSYVFAFVFPLSLLAVTIFTSLRVDDKLER 91

Query: 101 KFLEELALNQAIMEEDEENKDGSSEIPFEEKPALPRTRNRPKREA 144
           +FLEELA+N+A+ E DEE  +G   IP E++PA+PRTRNRPKREA
Sbjct: 92  EFLEELAVNEAMREADEE--EGDVAIPVEKEPAVPRTRNRPKREA 133

[Close]

BLAST of CmoCh04G023040 vs. TrEMBL
Match: M5X9K9_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026290mg PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-19
Identity = 64/113 (56.64%), Postives = 79/113 (69.91%), Query Frame = 1


Query: 32  ARAFFRPSK--LSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTA 91
           +RA   P    +SPA RFS     AR L VVT RAG +T+ Y+FAF +P SLI VT  T+
Sbjct: 3   SRALLNPPHVPISPATRFSS--RQARGLTVVT-RAGPTTNQYVFAFVMPLSLIAVTVFTS 62

Query: 92  LKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEIPFEEKPALPRTRNRPKRE 143
           ++I D LD++FLEE+A+NQAI E DE   D   ++P EEKPALPRTRNRPKRE
Sbjct: 63  MRIADKLDEEFLEEIAINQAIRETDE---DDEVDMPIEEKPALPRTRNRPKRE 109

[Close]

BLAST of CmoCh04G023040 vs. TrEMBL
Match: W9S4Q2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008627 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.0e-19
Identity = 62/116 (53.45%), Postives = 79/116 (68.10%), Query Frame = 1


Query: 31  PARAFFRPSKL--SPAVRF--SGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTA 90
           P  A F+  +   SPA+RF       A R L VVT RAG  TSSY+ AF +PFSL+++T 
Sbjct: 20  PTTAAFKCHRFPASPAIRFPLKSRDRAQRGLSVVT-RAGPGTSSYVLAFVLPFSLVVITV 79

Query: 91  LTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEIPFEEKPALPRTRNRPKRE 143
           LT+++I D LD+ FLEE+ALN+AI E DEE ++G  E P E+ P  PRTRNRPKRE
Sbjct: 80  LTSIRIADKLDRDFLEEVALNEAIREADEEEEEGDYEFPLEQ-PTTPRTRNRPKRE 133

[Close]

BLAST of CmoCh04G023040 vs. TAIR10
Match: AT4G31560.1 (AT4G31560.1 high chlorophyll fluorescence 153)

HSP 1 Score: 78.6 bits (192), Expect = 3.6e-15
Identity = 60/140 (42.86%), Postives = 82/140 (58.57%), Query Frame = 1


Query: 12  MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFS----GDPSAARALR--VVTTRAG 71
           MARL +S    P  P  +    +  +P    PA  F+    G     R +R   V TRAG
Sbjct: 1   MARLFVS---IPMQPTQISFPASSSQPLLSPPANNFTDGGAGGLCLTRRIRDSSVVTRAG 60

Query: 72  ASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEIP 131
            STSSY+ AF+IP +LI  T  T++KI D LD+ FLE++ALNQAI +  E+ ++G  +I 
Sbjct: 61  PSTSSYLLAFAIPATLIAATVFTSIKIADKLDEDFLEDIALNQAI-KAAEKGENGEGDIS 120

Query: 132 FE---EKPALPRTRNRPKRE 143
            +   ++P L RTRNRPKRE
Sbjct: 121 LDDVIQEPVLQRTRNRPKRE 136

[Close]

BLAST of CmoCh04G023040 vs. NCBI nr
Match: gi|449445051|ref|XP_004140287.1| (PREDICTED: uncharacterized protein LOC101209610 [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-45
Identity = 107/133 (80.45%), Postives = 113/133 (84.96%), Query Frame = 1


Query: 12  MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSY 71
           MAR LISTR FPF  LPL P R FFRPS  SP VRF  +PS +R LRVVTTRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60

Query: 72  IFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEIPFEEKPA 131
           IFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIMEEDE+ +DG SEI FEEKP 
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDG-SEISFEEKPT 120

Query: 132 LPRTRNRPKREAE 145
           +PRTRNRPKREAE
Sbjct: 121 VPRTRNRPKREAE 132

[Close]

BLAST of CmoCh04G023040 vs. NCBI nr
Match: gi|659072486|ref|XP_008465810.1| (PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo])

HSP 1 Score: 190.3 bits (482), Expect = 2.4e-45
Identity = 105/133 (78.95%), Postives = 110/133 (82.71%), Query Frame = 1


Query: 12  MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSY 71
           MAR LISTR FPF  LPL P RAFFRP   SP VRFS  PS +R LRVV TRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSY 60

Query: 72  IFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEIPFEEKPA 131
           IFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIMEEDE+ +   +EI FEEKP 
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEEKPT 120

Query: 132 LPRTRNRPKREAE 145
           LPRTRNRPKREAE
Sbjct: 121 LPRTRNRPKREAE 133

[Close]

BLAST of CmoCh04G023040 vs. NCBI nr
Match: gi|694327062|ref|XP_009354412.1| (PREDICTED: uncharacterized protein LOC103945553 [Pyrus x bretschneideri])

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21
Identity = 74/134 (55.22%), Postives = 90/134 (67.16%), Query Frame = 1


Query: 12  MARLLIS-TRAFPFPPLPLVPARAFFRPSK--LSPAVRFSGDPSAARALRVVTTRAGAST 71
           MARLLIS T +    P P  P+RA F P    +SPA RF G  +  R L VVT RAG +T
Sbjct: 1   MARLLISNTASLTLSPPPAPPSRASFIPPHVPISPATRFPGRQT--RGLEVVT-RAGPTT 60

Query: 72  SSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEIPFEE 131
           S Y+FAF +P SLI VT  T++++ D LD+ FLEE+A+NQAI E DEE   G ++   EE
Sbjct: 61  SQYVFAFVLPLSLIAVTVFTSIRVADKLDRDFLEEMAINQAIRETDEE---GEADKSIEE 120

Query: 132 KPALPRTRNRPKRE 143
           KPAL RTRNRPKRE
Sbjct: 121 KPALSRTRNRPKRE 128

[Close]

BLAST of CmoCh04G023040 vs. NCBI nr
Match: gi|645251101|ref|XP_008231524.1| (PREDICTED: uncharacterized protein LOC103330698 [Prunus mume])

HSP 1 Score: 107.8 bits (268), Expect = 1.6e-20
Identity = 73/133 (54.89%), Postives = 87/133 (65.41%), Query Frame = 1


Query: 12  MARLLISTRAFPFPPLPLVPARAFFRPSK--LSPAVRFSGDPSAARALRVVTTRAGASTS 71
           MARLLIS  A      P   +RA   P    +SPA RFS     AR L VVT RAG +T+
Sbjct: 1   MARLLISNTASLTLSPPAPSSRALLNPPHVPISPATRFSC--RQARGLTVVT-RAGPTTN 60

Query: 72  SYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEIPFEEK 131
            Y+FAF +P SLI VT  T+++I D LD+ FLEE+A+NQAI E DE   D   ++P EEK
Sbjct: 61  QYVFAFVMPLSLIAVTVFTSMRIADKLDEDFLEEIAINQAIRETDE---DDEVDMPIEEK 120

Query: 132 PALPRTRNRPKRE 143
           PALPRTRNRPKRE
Sbjct: 121 PALPRTRNRPKRE 127

[Close]

BLAST of CmoCh04G023040 vs. NCBI nr
Match: gi|694384373|ref|XP_009368089.1| (PREDICTED: uncharacterized protein LOC103957632 [Pyrus x bretschneideri])

HSP 1 Score: 107.5 bits (267), Expect = 2.1e-20
Identity = 70/135 (51.85%), Postives = 90/135 (66.67%), Query Frame = 1


Query: 12  MARLLIS-TRAFPFPPLPLVP-ARAFFRPSK--LSPAVRFSGDPSAARALRVVTTRAGAS 71
           MA+LLIS T +    P PL P +RA F P +  ++PA R+ G  +   A   V TRAG +
Sbjct: 1   MAKLLISNTASLTLSPPPLAPLSRASFIPPRVPITPASRYPGRQTRGLA---VVTRAGPT 60

Query: 72  TSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEIPFE 131
           TS Y+FAF +P SLI VT  T++++ D LD+ FLEE+A+NQAI E DE   DG ++   E
Sbjct: 61  TSQYVFAFVLPLSLIAVTVFTSIRVADKLDRDFLEEMAINQAIRETDE---DGEADSSIE 120

Query: 132 EKPALPRTRNRPKRE 143
           E PALPRTRNRPKRE
Sbjct: 121 EMPALPRTRNRPKRE 129

The following BLAST results are available for this feature:

BLAST of CmoCh04G023040 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G023040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTR1_CUCSA	7.5e-46	80.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G440100 PE=4 SV=1	[more]
A0A0K9R2S2_SPIOL	3.2e-20	56.14	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113190 PE=4 SV=1	[more]
F6GX98_VITVI	7.1e-20	59.05	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01750 PE=4 SV=...	[more]
M5X9K9_PRUPE	1.6e-19	56.64	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026290mg PE=4 S...	[more]
W9S4Q2_9ROSA	6.0e-19	53.45	Uncharacterized protein OS=Morus notabilis GN=L484_008627 PE=4 SV=1	[more]

BLAST of CmoCh04G023040 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G31560.1	3.6e-15	42.86	high chlorophyll fluorescence 153	[more]

BLAST of CmoCh04G023040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445051\|ref\|XP_004140287.1\|	1.1e-45	80.45	PREDICTED: uncharacterized protein LOC101209610 [Cucumis sativus]	[more]
gi\|659072486\|ref\|XP_008465810.1\|	2.4e-45	78.95	PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo]	[more]
gi\|694327062\|ref\|XP_009354412.1\|	1.1e-21	55.22	PREDICTED: uncharacterized protein LOC103945553 [Pyrus x bretschneideri]	[more]
gi\|645251101\|ref\|XP_008231524.1\|	1.6e-20	54.89	PREDICTED: uncharacterized protein LOC103330698 [Prunus mume]	[more]
gi\|694384373\|ref\|XP_009368089.1\|	2.1e-20	51.85	PREDICTED: uncharacterized protein LOC103957632 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0008150	biological_process
biological_process	GO:0010190	cytochrome b6f complex assembly
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0042651	thylakoid membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G023040.1	CmoCh04G023040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37753	FAMILY NOT NAMED	coord: 13..144 score: 4.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G023040	CmaCh15G008300	Cucurbita maxima (Rimu)	cmacmoB309
CmoCh04G023040	CmaCh04G022010	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G023040	Cla005898	Watermelon (97103) v1	cmowmB706
CmoCh04G023040	Csa5G440100	Cucumber (Chinese Long) v2	cmocuB720
CmoCh04G023040	MELO3C005141	Melon (DHL92) v3.5.1	cmomeB625
CmoCh04G023040	ClCG01G007560	Watermelon (Charleston Gray)	cmowcgB636
CmoCh04G023040	CSPI05G15530	Wild cucumber (PI 183967)	cmocpiB728
CmoCh04G023040	Lsi09G008000	Bottle gourd (USVL1VR-Ls)	cmolsiB610
CmoCh04G023040	Cp4.1LG13g06000	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G023040	Cp4.1LG01g19090	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G023040	MELO3C005141.2	Melon (DHL92) v3.6.1	cmomedB714
CmoCh04G023040	CsaV3_5G024570	Cucumber (Chinese Long) v3	cmocucB0852
CmoCh04G023040	Cla97C01G007900	Watermelon (97103) v2	cmowmbB676
CmoCh04G023040	Bhi12G000980	Wax gourd	cmowgoB0828
CmoCh04G023040	CsGy5G015320	Cucumber (Gy14) v2	cgybcmoB631
CmoCh04G023040	Carg01374	Silver-seed gourd	carcmoB1121
CmoCh04G023040	Carg17734	Silver-seed gourd	carcmoB0648

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G023040	CmoCh15G008610	Cucurbita moschata (Rifu)	cmocmoB262

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G023040	Wax gourd	cmowgoB0823