CsGy5G015320 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G015320
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	High chlorophyll fluorescence 153, putative
Location	Chr5 : 21381104 .. 21383417 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAGGGAGAAATAGAATCAAGTTGGATAGCGAAAGGAAGCACAAATTGCGTAGATAGTAAGGATTGGGAAGCACTAGCAACCGAAACAACCAAGGAGCCAAGTAATAGCATCGTAGTTTGCTTACATTAATTTTGAAAAATACATAAACTTCACATTTGTTTCAAATGGGTAATTGTGAAGAGGTCCATTGAATTGGAGTTGGGCCATCCATTATCATCACACCCATTTACATAACAACAACTTCAAGCCTTCAACAATGTCCATTCCAATTCCATACACTTCCAATAGGCAATAGCCATGGCCAGGTTCCTTATCTCCACCCGACCCTTTCCCTTTTCCACTCTCCCCCTTGCTCCCCCACGGCCATTCTTCAGACCCTCCATTTTTTCCCCGCCGGTCAGATTCTTCGCCAACCCATCGCCCTCCAGGACCTTACGAGTCGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCCATCCCTTTATCTCTTATTCTCATCACTGTCCTCACTGCCCTTAAAATCGGCGATAACCTTGACAAGAAGTTTCTTGAGGAGGTAACCTCTATTATTCATTTCTAATTTTCGCTTCATTTTGTTTGCGGAACTGAATTTGATGAGATTCTGGTGGTTTGCCGTTCAAGTTTGGTTTAGATAAGTTTACTTGAGCTTTGAAATGAGACTTCTATTGTACTGAGGTTTGTGTTTGATTTAATTAAGGCTTACTGTCAACTGTTGAGGAATATCACATTTGCTTATGTTTTACTGTTACAATATGTATGGTTGTTTTGTTTTATGATTTTAGTCTTTGAAGACATGGCTTGGCTTCTTCACATGGCAGCACCTAAACTAGGATTATGCAGTGTTTTATGGGTTTATTGAGGTCAAATATTACAGGGTTGAGACATTGTTACCAAGATGCATTCGAGCTAGCTCTGCAAGAACTGGTTTTACTTACTTATCCATGGGGGTGATTGCTTCAATTTGTTAAGCACACTTTCAAGTTCAATGGGATCAGAAAAAGGAGAGACACCCCCACGGTCCCACCCACGCTAAAGCTGCCCCCTTTGTTCATCAATGCTCAAAAGCTTATTTTTGTAGATTCATGGCCATTTGATTAGATGATCCCCAATTGAATTGGATAATCTAGTACCAGTAAGCTCGAGAGAGGGCCTCATATGTCCTCATTTCTCGCCAATTACCACTACCACTGAGCTTGAGAGAGAGTACCTTAAGGCCAGTTCTGAGATGTTAAATGACTAGACCATGGTTTAATAACCATTTAGTTTATGAGAACTATGCTCTTTTTTTTTGTCACAACTTGTTTTTATATTTCCTAGAGAAATATATGAATTATTATAGCCAAATTTCAAAATGAAACATGTTTTTCAAAACTTAACTTGGACTTTAAAGCTTAAGAAGTAAATAGCAGGAAAAACAAAATCAGATGTGAAAGTAATATTTATAAGCTTAGTTTTCAAAAACCAAAGTTCTTCCCACCTTGGACACCCCATAGGCCTAATGTTCATAACTTACAAGTTTTCCATGTGTGAAAACCCTAAATTAGGACTTCGAAGGCATCCCAAAGCATCTCAAGTTCTTCCCACCTTGATTACCTCGTAGACCTTGCTTAAAGCAGGAATATTTTGGAAGCATTAAAATAGGGAGAGGAAGAAGATGGCAAAGACCATCATGGATGTGTTCGATCATGTAGCTTCACTTAAATTCCACATTCTTGGTTATGAAAGAGCTGGAAAAACACATGACATGTTTCGTTTTTATGTATGGGGAACTGATTTTTTAGGGAAATTGATTCCTATGATTGGGGAATGGGCACTGAGCCTTCTGTTGAATTTTGTTTGTGAAACAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGATTACGAAGATGGTTCAGAAATATCTTTTGAAGAAAAACCAACTGTTCCACGAACTCGAAATCGACCTAAAAGAGAAGCTGAGGTATAAATAAACTGCTTACTTCTTTTTTAGAGGTGTTTATATGATCGAATCAGGTGGCTAAGAAATGGTTCAAGGAACTAAGAAACTTCCATGTATATTGTATGTAATTTTTCCCCCTTAATAATGATTAGTTAAAAGTTGGTCGGAATGCTGATTAGCTTAGATATGTAATTATGTTATTGCATATTCTTCAAACTGAAATATCTGTGGAATGGCCTTGATTATGTTCATCATTCAGTAAAAATATCATTAATGGTTCAAATTCAGTTCTTAAATCTTTAATAAAATTTTAGTTCTTCGTAGTTA

mRNA sequence

CTAAAGGGAGAAATAGAATCAAGTTGGATAGCGAAAGGAAGCACAAATTGCGTAGATAGTAAGGATTGGGAAGCACTAGCAACCGAAACAACCAAGGAGCCAAGTAATAGCATCGTAGTTTGCTTACATTAATTTTGAAAAATACATAAACTTCACATTTGTTTCAAATGGGTAATTGTGAAGAGGTCCATTGAATTGGAGTTGGGCCATCCATTATCATCACACCCATTTACATAACAACAACTTCAAGCCTTCAACAATGTCCATTCCAATTCCATACACTTCCAATAGGCAATAGCCATGGCCAGGTTCCTTATCTCCACCCGACCCTTTCCCTTTTCCACTCTCCCCCTTGCTCCCCCACGGCCATTCTTCAGACCCTCCATTTTTTCCCCGCCGGTCAGATTCTTCGCCAACCCATCGCCCTCCAGGACCTTACGAGTCGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCCATCCCTTTATCTCTTATTCTCATCACTGTCCTCACTGCCCTTAAAATCGGCGATAACCTTGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGATTACGAAGATGGTTCAGAAATATCTTTTGAAGAAAAACCAACTGTTCCACGAACTCGAAATCGACCTAAAAGAGAAGCTGAGGTATAAATAAACTGCTTACTTCTTTTTTAGAGGTGTTTATATGATCGAATCAGGTGGCTAAGAAATGGTTCAAGGAACTAAGAAACTTCCATGTATATTGTATGTAATTTTTCCCCCTTAATAATGATTAGTTAAAAGTTGGTCGGAATGCTGATTAGCTTAGATATGTAATTATGTTATTGCATATTCTTCAAACTGAAATATCTGTGGAATGGCCTTGATTATGTTCATCATTCAGTAAAAATATCATTAATGGTTCAAATTCAGTTCTTAAATCTTTAATAAAATTTTAGTTCTTCGTAGTTA

Coding sequence (CDS)

ATGGCCAGGTTCCTTATCTCCACCCGACCCTTTCCCTTTTCCACTCTCCCCCTTGCTCCCCCACGGCCATTCTTCAGACCCTCCATTTTTTCCCCGCCGGTCAGATTCTTCGCCAACCCATCGCCCTCCAGGACCTTACGAGTCGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCCATCCCTTTATCTCTTATTCTCATCACTGTCCTCACTGCCCTTAAAATCGGCGATAACCTTGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGATTACGAAGATGGTTCAGAAATATCTTTTGAAGAAAAACCAACTGTTCCACGAACTCGAAATCGACCTAAAAGAGAAGCTGAGGTATAA

Protein sequence

MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGSEISFEEKPTVPRTRNRPKREAEV

Homology

[Close]

BLAST of CsGy5G015320 vs. NCBI nr
Match: XP_004140287.1 (PREDICTED: uncharacterized protein LOC101209610 [Cucumis sativus] >KGN51096.1 hypothetical protein Csa_5G440100 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 2.0e-63
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60
           MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGSEISFEEKPTV 120
           IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGSEISFEEKPTV
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGSEISFEEKPTV 120

Query: 121 PRTRNRPKREAEV 134
           PRTRNRPKREAEV
Sbjct: 121 PRTRNRPKREAEV 133

[Close]

BLAST of CsGy5G015320 vs. NCBI nr
Match: XP_008465810.1 (PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo])

HSP 1 Score: 228.0 bits (580), Expect = 1.9e-56
Identity = 124/134 (92.54%), Postives = 128/134 (95.52%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60
           MARFLISTRPFPFS+LPLAPPR FFRP  FSPPVRF A+PSPSRTLRVV TRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYE-DGSEISFEEKPT 120
           IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYE DG+EISFEEKPT
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEEKPT 120

Query: 121 VPRTRNRPKREAEV 134
           +PRTRNRPKREAEV
Sbjct: 121 LPRTRNRPKREAEV 134

[Close]

BLAST of CsGy5G015320 vs. NCBI nr
Match: XP_023525740.1 (uncharacterized protein LOC111789252 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46
Identity = 109/134 (81.34%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60
           MAR LISTR FPF  LPL P R FFRPS  SP VRF  +PS +R LRVVTTRAGASTSSY
Sbjct: 1   MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDG-SEISFEEKPT 120
           IFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIMEEDE+ +DG SEISFEEKP 
Sbjct: 61  IFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEEKPA 120

Query: 121 VPRTRNRPKREAEV 134
           +PRTRNRPKREAEV
Sbjct: 121 LPRTRNRPKREAEV 134

[Close]

BLAST of CsGy5G015320 vs. NCBI nr
Match: XP_022961614.1 (uncharacterized protein LOC111462310 [Cucurbita moschata])

HSP 1 Score: 191.4 bits (485), Expect = 1.9e-45
Identity = 107/133 (80.45%), Postives = 113/133 (84.96%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60
           MAR LISTR FPF  LPL P R FFRPS  SP VRF  +PS +R LRVVTTRAGASTSSY
Sbjct: 12  MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSY 71

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDG-SEISFEEKPT 120
           IFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIMEEDE+ +DG SEI FEEKP 
Sbjct: 72  IFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEIPFEEKPA 131

Query: 121 VPRTRNRPKREAE 133
           +PRTRNRPKREAE
Sbjct: 132 LPRTRNRPKREAE 144

[Close]

BLAST of CsGy5G015320 vs. NCBI nr
Match: XP_022990673.1 (uncharacterized protein LOC111487491 [Cucurbita maxima])

HSP 1 Score: 187.2 bits (474), Expect = 3.6e-44
Identity = 107/132 (81.06%), Postives = 113/132 (85.61%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60
           MAR LISTR FPF   PL P R FFRPS  SP VRF  +PS +RTLRVVTTRAGASTSSY
Sbjct: 12  MARLLISTRAFPF---PLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSY 71

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDG-SEISFEEKPT 120
           IFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIMEEDE+ +DG SEISFEEKP 
Sbjct: 72  IFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEEKPA 131

Query: 121 VPRTRNRPKREA 132
           +PRTRNRPKREA
Sbjct: 132 LPRTRNRPKREA 140

[Close]

BLAST of CsGy5G015320 vs. TAIR10
Match: AT4G31560.1 (high chlorophyll fluorescence 153)

HSP 1 Score: 80.1 bits (196), Expect = 1.1e-15
Identity = 56/132 (42.42%), Postives = 79/132 (59.85%), Query Frame = 0


Query: 13  FSTLPLAPPRPFFRPS----IFSPPVRFFANPSP-----SRTLR--VVTTRAGASTSSYI 72
           F ++P+ P +  F  S    + SPP   F +        +R +R   V TRAG STSSY+
Sbjct: 5   FVSIPMQPTQISFPASSSQPLLSPPANNFTDGGAGGLCLTRRIRDSSVVTRAGPSTSSYL 64

Query: 73  FAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGSEISFE---EKP 131
            AF+IP +LI  TV T++KI D LD+ FLE++ALNQAI   ++      +IS +   ++P
Sbjct: 65  LAFAIPATLIAATVFTSIKIADKLDEDFLEDIALNQAIKAAEKGENGEGDISLDDVIQEP 124

[Close]

BLAST of CsGy5G015320 vs. TrEMBL
Match: tr|A0A0A0KTR1|A0A0A0KTR1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G440100 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.4e-63
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60
           MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGSEISFEEKPTV 120
           IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGSEISFEEKPTV
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGSEISFEEKPTV 120

Query: 121 PRTRNRPKREAEV 134
           PRTRNRPKREAEV
Sbjct: 121 PRTRNRPKREAEV 133

[Close]

BLAST of CsGy5G015320 vs. TrEMBL
Match: tr|A0A1S3CQ37|A0A1S3CQ37_CUCME (uncharacterized protein LOC103503402 OS=Cucumis melo OX=3656 GN=LOC103503402 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.2e-56
Identity = 124/134 (92.54%), Postives = 128/134 (95.52%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60
           MARFLISTRPFPFS+LPLAPPR FFRP  FSPPVRF A+PSPSRTLRVV TRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYE-DGSEISFEEKPT 120
           IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYE DG+EISFEEKPT
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEEKPT 120

Query: 121 VPRTRNRPKREAEV 134
           +PRTRNRPKREAEV
Sbjct: 121 LPRTRNRPKREAEV 134

[Close]

BLAST of CsGy5G015320 vs. TrEMBL
Match: tr|A0A2P6S8I2|A0A2P6S8I2_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0319401 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 8.3e-21
Identity = 68/134 (50.75%), Postives = 87/134 (64.93%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPP----RPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGAS 60
           MA+ LIS      ++LPL+PP    R  F P    P   F +  S +R +  V TRAG +
Sbjct: 1   MAKLLISNT----TSLPLSPPSSSSRASFNPPHVPPARLFLSGKSSNRGVTTVVTRAGPT 60

Query: 61  TSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGSEISFEE 120
           TS Y+FAF +PLSLI  TV T+++I D LD+ +LEE+A+NQAI E DED  D  ++S EE
Sbjct: 61  TSQYVFAFVLPLSLIAFTVFTSIRIADKLDRDYLEEVAINQAIRETDED--DEVDMSLEE 120

Query: 121 KPTVPRTRNRPKRE 131
           K  VPRTRNRPKRE
Sbjct: 121 KAAVPRTRNRPKRE 128

[Close]

BLAST of CsGy5G015320 vs. TrEMBL
Match: tr|A0A251QDA1|A0A251QDA1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G027100 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.7e-19
Identity = 67/136 (49.26%), Postives = 88/136 (64.71%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSI------FSPPVRFFANPSPSRTLRVVTTRAG 60
           MAR LIS      ++L L+PP P  R  +       SP  RF +  +   T   V TRAG
Sbjct: 1   MARLLISNT----ASLTLSPPAPSSRALLNPPHVPISPATRFSSRQARGLT---VVTRAG 60

Query: 61  ASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGSEISF 120
            +T+ Y+FAF +PLSLI +TV T+++I D LD++FLEE+A+NQAI E DED  D  ++  
Sbjct: 61  PTTNQYVFAFVMPLSLIAVTVFTSMRIADKLDEEFLEEIAINQAIRETDED--DEVDMPI 120

Query: 121 EEKPTVPRTRNRPKRE 131
           EEKP +PRTRNRPKRE
Sbjct: 121 EEKPALPRTRNRPKRE 127

[Close]

BLAST of CsGy5G015320 vs. TrEMBL
Match: tr|A0A2R6R1N8|A0A2R6R1N8_ACTCH (V-set and immunoglobulin domain-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc11147 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.0e-19
Identity = 60/101 (59.41%), Postives = 78/101 (77.23%), Query Frame = 0


Query: 33  PVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE 92
           PVRF    +   +   V TRAG  T++YIFAF +PLSL+ ITV T+++I D LD++FLEE
Sbjct: 36  PVRFCLRKTRGSS---VVTRAGPGTNTYIFAFVLPLSLLAITVFTSIRIADKLDREFLEE 95

Query: 93  LALNQAIMEEDEDYEDG-SEISFEEKPTVPRTRNRPKREAE 133
           +A+NQAIME +E  EDG + +SFEEKP++PRTRNRPKREAE
Sbjct: 96  IAVNQAIMEAEE--EDGDAGMSFEEKPSLPRTRNRPKREAE 131

The following BLAST results are available for this feature:

BLAST of CsGy5G015320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140287.1	2.0e-63	100.00	PREDICTED: uncharacterized protein LOC101209610 [Cucumis sativus] >KGN51096.1 hy...	[more]
XP_008465810.1	1.9e-56	92.54	PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo]	[more]
XP_023525740.1	1.3e-46	81.34	uncharacterized protein LOC111789252 [Cucurbita pepo subsp. pepo]	[more]
XP_022961614.1	1.9e-45	80.45	uncharacterized protein LOC111462310 [Cucurbita moschata]	[more]
XP_022990673.1	3.6e-44	81.06	uncharacterized protein LOC111487491 [Cucurbita maxima]	[more]

BLAST of CsGy5G015320 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G31560.1	1.1e-15	42.42	high chlorophyll fluorescence 153	[more]

BLAST of CsGy5G015320 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy5G015320 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KTR1\|A0A0A0KTR1_CUCSA	1.4e-63	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G440100 PE=4 SV=1	[more]
tr\|A0A1S3CQ37\|A0A1S3CQ37_CUCME	1.2e-56	92.54	uncharacterized protein LOC103503402 OS=Cucumis melo OX=3656 GN=LOC103503402 PE=...	[more]
tr\|A0A2P6S8I2\|A0A2P6S8I2_ROSCH	8.3e-21	50.75	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0319401 PE=4...	[more]
tr\|A0A251QDA1\|A0A251QDA1_PRUPE	2.7e-19	49.26	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G027100 PE=4 SV=1	[more]
tr\|A0A2R6R1N8\|A0A2R6R1N8_ACTCH	6.0e-19	59.41	V-set and immunoglobulin domain-containing protein OS=Actinidia chinensis var. c...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010190	cytochrome b6f complex assembly
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0042651	thylakoid membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G015320.1	CsGy5G015320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..133
None	No IPR available	PANTHER	PTHR37753	FAMILY NOT NAMED	coord: 1..131

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G015320	Cla005898	Watermelon (97103) v1	cgybwmB383
CsGy5G015320	Csa5G440100	Cucumber (Chinese Long) v2	cgybcuB223
CsGy5G015320	MELO3C005141	Melon (DHL92) v3.5.1	cgybmeB303
CsGy5G015320	ClCG01G007560	Watermelon (Charleston Gray)	cgybwcgB334
CsGy5G015320	CSPI05G15530	Wild cucumber (PI 183967)	cgybcpiB225
CsGy5G015320	CmaCh15G008300	Cucurbita maxima (Rimu)	cgybcmaB613
CsGy5G015320	CmaCh04G022010	Cucurbita maxima (Rimu)	cgybcmaB651
CsGy5G015320	CmoCh15G008610	Cucurbita moschata (Rifu)	cgybcmoB588
CsGy5G015320	CmoCh04G023040	Cucurbita moschata (Rifu)	cgybcmoB631
CsGy5G015320	Lsi09G008000	Bottle gourd (USVL1VR-Ls)	cgyblsiB296
CsGy5G015320	Cp4.1LG01g19090	Cucurbita pepo (Zucchini)	cgybcpeB629
CsGy5G015320	Cp4.1LG13g06000	Cucurbita pepo (Zucchini)	cgybcpeB602
CsGy5G015320	MELO3C005141.2	Melon (DHL92) v3.6.1	cgybmedB303
CsGy5G015320	CsaV3_5G024570	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G015320	Cla97C01G007900	Watermelon (97103) v2	cgybwmbB321
CsGy5G015320	Bhi12G000980	Wax gourd	cgybwgoB429
CsGy5G015320	Carg17734	Silver-seed gourd	carcgybB0485
CsGy5G015320	Carg01374	Silver-seed gourd	carcgybB0816

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None