CSPI05G15530 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTGCGTAGATAGTAAGGATTGGGAAGCACTAGCAACCGAAACAACCAAGGAGCCAAGTAATAGCATCGTAGTTTGCTTACATTAATTTTGAAAAATACATAAACTTCACATTTGTTTCAAATGGGTAATTGTGAAGAGGTCCATTGAATTGGAGTTGGGCCATCCATTATCATCACACCCATTTACATAACAAACAACTTCAAGCCTTCAACAATGTCCATTCCAATTCCATACACTTCCAATAGGCAATAGCCATGGCCAGGTTCCTTATCTCCACCCGACCCTTTCCCTTTTCCACTCTCCCCCTTGCTCCCCCACGGCCATTCTTCAGACCCTCCATTTTTTCCCCGCCGGTCAGATTCTTCGCCAACCCATCGCCCTCCAGGACCTTACGAGTCGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCCATCCCTTTATCTCTTATTCTCATCACTGTCCTCACCGCCCTTAAAATCGGCGATAACCTTGACAAGAAGTTTCTTGAGGAGGTAACCTCTATTATTCATTTCTAATTTCGCTTCATTTTGTTTGCGGAACTGAATTTGATGAGATTCTGGTGGTTTGCCGTTCAAGTTTGGTTTAGATAAGTTTACTTGAGCTTTGAAATGAGACTTCTATTGTACTGTGGTTTGTGTTTTATTTAATTAAGGCTTACTGTCAACTGTTGAGGAATATCACATTTGCTTATGTTTTACTGTTACAATATGTATGGTTGTTTTGTTTTATGATTTTAGTCTTTGAAGACATGGCTTGGCTTCTTCACATGGCAGCACCTAAACTAGGATTATGCAGTGTTTTATGGGTTTATTGAGGTCAAATATTACAGGGTTGAGACATTGTTACCAAGATGCATTCGAGCTAGCTCTGCAAGAACTGGTTTTACTTACTTATCCATGGGGGTGATTGCTTCAATTTGTTAAGCACACTTTCAAGTTCAATGGGATCAGAAAAAGGAGAGACACCCCCACGGTCCCACCCACGCTAAAGCTGCCCCCTTTGTTCATCAATGCTCAAAAGCTTATTTTTGTAGATTCATGGCCATTTGATTAGATGATCCCCAATTGAATTGGATAATCTAGTACCAGTAAGCTCGAGAGAGGGCCTCATATGTCCTCATTTCTCGCCAATTACCACTACCACTGAGCTTGAGAGAGAGTACCTTAAGGCCAGTTCTGAGATGTTAAATGACTAGACCATGGTTTAATAACCATTTAGTTTATGAGAACTATGCTCTTTTTTTTTGTCACAACTTGTTTTTATATTTCCTAGAGAAATATATGAATTATTATAGCCAAATTTCAAAATGAAACATGTTTTTCAAAACTTAACTTGGACTTTAAAGCTTAAGAAGTAAATAGCAGGAAAAACAAAATCAGATGTGAAAGTAATATTTATAAGCTTAGTTTTCAAAAACCAAAGTTCTTCCCACCTTGGACACCCCATAGGCCTAATGTTCATAACTTACAAGTTTTCCATGTGTGAAAACCCTAAATTAGGACTTCGAAGGCATCCCAAAGCATCTCAAGTTCTTCCCACCTTGATTACCTCGTAGACCTTGCTTAAAGCAGGAATATTTTGGAAGCATTAAAATAGGGAGAGGAAGAAGATGGCAAAGACCATCATGGATGTGTTCGATCATGTAGCTTCACTTAAATTCCACATTCTTGGTTATGAAAGAGCTGGAAAAACACATGACATGTTTCGTTTTTATGTATGGGGAACTGATTTTTTAGGGAAATTGATTCCTATGATTGGGGAATGGGCACTGAGCCTTCTGTTGAATTTTGTTTGTGAAACAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGATTACAAAGATGGTTCAGAAATATCTTTTGAAGAAAAACCAACTGTTCCACGAACTCGAAATCGACCTAAAAGAGAAGCTGAGGTATAAATAAACTGCTTACTTCTTTTTTAGAGGTGTTTATATGATCGAATCAGGTGGCTAAGAAATGGTTCAAGGAACTAAGAAACTTCCATGTATATTGTATGTAATTTTTCCCCCTTAATAATGATTAGTTAAAAGTTGGTCGGAATGCTGATTAGCTTAGATATGTAATTATGTTATTGCATATTCTTCAAACTGAAATATCTGTGTAATGGCCTTGATTATGTTCATCATTCAGTAAAAATATCATTAATGGTTCAAATTCAGTTCTTAAATCTTTAAT ATGGCCAGGTTCCTTATCTCCACCCGACCCTTTCCCTTTTCCACTCTCCCCCTTGCTCCCCCACGGCCATTCTTCAGACCCTCCATTTTTTCCCCGCCGGTCAGATTCTTCGCCAACCCATCGCCCTCCAGGACCTTACGAGTCGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCCATCCCTTTATCTCTTATTCTCATCACTGTCCTCACCGCCCTTAAAATCGGCGATAACCTTGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGATTACAAAGATGGTTCAGAAATATCTTTTGAAGAAAAACCAACTGTTCCACGAACTCGAAATCGACCTAAAAGAGAAGCTGAGGTATAA ATGGCCAGGTTCCTTATCTCCACCCGACCCTTTCCCTTTTCCACTCTCCCCCTTGCTCCCCCACGGCCATTCTTCAGACCCTCCATTTTTTCCCCGCCGGTCAGATTCTTCGCCAACCCATCGCCCTCCAGGACCTTACGAGTCGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCCATCCCTTTATCTCTTATTCTCATCACTGTCCTCACCGCCCTTAAAATCGGCGATAACCTTGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGATTACAAAGATGGTTCAGAAATATCTTTTGAAGAAAAACCAACTGTTCCACGAACTCGAAATCGACCTAAAAGAGAAGCTGAGGTATAA
BLAST of CSPI05G15530 vs. TrEMBL
Match: A0A0A0KTR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G440100 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 9.7e-64 Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 1
BLAST of CSPI05G15530 vs. TrEMBL
Match: M5X9K9_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026290mg PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 8.0e-18 Identity = 55/100 (55.00%), Postives = 72/100 (72.00%), Query Frame = 1
BLAST of CSPI05G15530 vs. TrEMBL
Match: A0A0V0H127_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.0e-17 Identity = 54/91 (59.34%), Postives = 66/91 (72.53%), Query Frame = 1
BLAST of CSPI05G15530 vs. TrEMBL
Match: M1A8U3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401006753 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.0e-17 Identity = 54/91 (59.34%), Postives = 66/91 (72.53%), Query Frame = 1
BLAST of CSPI05G15530 vs. TrEMBL
Match: A0A0K9R2S2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113190 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 4.0e-17 Identity = 58/109 (53.21%), Postives = 76/109 (69.72%), Query Frame = 1
BLAST of CSPI05G15530 vs. TAIR10
Match: AT4G31560.1 (AT4G31560.1 high chlorophyll fluorescence 153) HSP 1 Score: 80.9 bits (198), Expect = 6.7e-16 Identity = 56/132 (42.42%), Postives = 79/132 (59.85%), Query Frame = 1
BLAST of CSPI05G15530 vs. NCBI nr
Match: gi|449445051|ref|XP_004140287.1| (PREDICTED: uncharacterized protein LOC101209610 [Cucumis sativus]) HSP 1 Score: 250.8 bits (639), Expect = 1.4e-63 Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 1
BLAST of CSPI05G15530 vs. NCBI nr
Match: gi|659072486|ref|XP_008465810.1| (PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo]) HSP 1 Score: 229.2 bits (583), Expect = 4.3e-57 Identity = 124/134 (92.54%), Postives = 128/134 (95.52%), Query Frame = 1
BLAST of CSPI05G15530 vs. NCBI nr
Match: gi|645251101|ref|XP_008231524.1| (PREDICTED: uncharacterized protein LOC103330698 [Prunus mume]) HSP 1 Score: 103.6 bits (257), Expect = 2.7e-19 Identity = 67/136 (49.26%), Postives = 86/136 (63.24%), Query Frame = 1
BLAST of CSPI05G15530 vs. NCBI nr
Match: gi|694384373|ref|XP_009368089.1| (PREDICTED: uncharacterized protein LOC103957632 [Pyrus x bretschneideri]) HSP 1 Score: 101.3 bits (251), Expect = 1.4e-18 Identity = 67/135 (49.63%), Postives = 87/135 (64.44%), Query Frame = 1
BLAST of CSPI05G15530 vs. NCBI nr
Match: gi|470134475|ref|XP_004303075.1| (PREDICTED: uncharacterized protein LOC101296400 [Fragaria vesca subsp. vesca]) HSP 1 Score: 100.9 bits (250), Expect = 1.8e-18 Identity = 66/126 (52.38%), Postives = 83/126 (65.87%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |