Cla97C01G007900 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G007900
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	high chlorophyll fluorescence 153
Location	Cla97Chr01 : 8104869 .. 8106618 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGGCTCCTTATCTCGACCCGACTCTTTCCCTTTTCCCCTCCCCCCGTCGCTCCGCCGCGGGCATTCTTCACGCCCTCCAGTTTTTCGCCGCCGGTCAGATTCTCCGCCCACCCATCCGCGTCCAGAACCCTACGAGTGGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCTATCCCTTTATCTCTTATTCTCATCACTGTCCTCACCGCTCTTAAAATCGGCGATAACCTCGACAAGAAGTTTCTTGAGGAGGTACTTTATTTTTATTTTTAATTCAGCTCCATTTTGTTTGTGGGACTAAATTTTGATGGGAGATTCTTGTGGTTTGTCGTTCAAGTTTGGTTTAGATAAGGTTACTTCATACTTGAGTTTTGAAATAAGATTTCTATTAATGTTGAGTTTGTAGGATATTAGTGCACATAACCTGTTTGATTTAAGGCCTACTGTTTAACTGTTGAGGAAATCACATTTGATTATGATTTACTGTTAGAATATGTATGGTTGCTTTATTTTATGGTTTTAGTCTTTGGAGACATGGCTTGGCTTCTAACATGGTAGCACCTAAACTAGGATTATGAAGTGTGTTTTGAGTTTTCTGAGGCCAAATATTACAGGGTTGAGAAATTGTTACTAAGATGCATTCAAGCTAACTCTGCAAGAGCTGATTTTAATACTAAGATTGTTCTAGTTCTTATATCGGGGTGATTGGTTTAATTTGTTAATCACTCTCTTCAAATTCAGTGGGAGCAGAAAAAGGAGAGATACCCCCACCCGCCCACAAGTTGCCCCCTTTGTTCATCAGTGCTCTAAAGCTTGATTTTGTAGATTCATGGTCATTTGATTAGATGACCCCCCACTTGGATAGGATAATCTAGGTATCGAAGGCCCCATTCCTTGTAGTATATATCCTCAGTTCTCACCAATCACCCCCACCACTAAGCTCGAGAGAGGGTACTTTAAGGCCAGTTTTGAATGACCAGAGGATGTTAAATAACTAAGCTTTGGTTTGGTAATTATTTGGTTTTTAAAAATTATACTTGTTTTCTCACCATTTCTTTACCATCATTTTTATCTTTCTTAAAAAAATATTTGAGAATAGCCAAATTTCAAAACCAAAAAACATGTTTTTCGAAACTTAACTTGGGTTTAAAAAACATTCCTAAAAAGTAGATAACAAAATGAAGAGATTCAGATGTGAAAATAGTGTTTATAAGCTTAATTTCAAAAACCAAACTCTAAGGGGACCTAAGTTTTCCATGTGTGAGAGTCCTAAATTAGGACTTTGAAGGCATCTCAAAACATCTCAAAACATCTAAAGTTCTTCCCACCTGGTGACCCCGTAGAGCTGTCTAAAGCAGGAATATTTTGGAAGCATTAAAATAGGGAGAGGGAGAAGATGGCAAAAACCATATTGCTAAGCTCAGGGATACGATCATGGAACTTCACTTAAAGTCTACATCCTAGTTATAAAAGAGATGAAAAAGAAAACCTTGGTTCATTTTTATGTATAGTGATCTGTTTTTGAGGGAAATTGGTTTGTATAAATTGGGGAATGGGCACTGAACTGAGTCTGTTGTATTTTGTTTGTGAACACCAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGAGAACAAAGATGATGGTTCAGAAATATCTTTTGAAGAAAAACCAGCTCTTCCACGAACTCGCAACCGCCCTAAAAGAGAAGCTGAAGTTTAA

mRNA sequence

ATGGCTAGGCTCCTTATCTCGACCCGACTCTTTCCCTTTTCCCCTCCCCCCGTCGCTCCGCCGCGGGCATTCTTCACGCCCTCCAGTTTTTCGCCGCCGGTCAGATTCTCCGCCCACCCATCCGCGTCCAGAACCCTACGAGTGGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCTATCCCTTTATCTCTTATTCTCATCACTGTCCTCACCGCTCTTAAAATCGGCGATAACCTCGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGAGAACAAAGATGATGGTTCAGAAATATCTTTTGAAGAAAAACCAGCTCTTCCACGAACTCGCAACCGCCCTAAAAGAGAAGCTGAAGTTTAA

Coding sequence (CDS)

ATGGCTAGGCTCCTTATCTCGACCCGACTCTTTCCCTTTTCCCCTCCCCCCGTCGCTCCGCCGCGGGCATTCTTCACGCCCTCCAGTTTTTCGCCGCCGGTCAGATTCTCCGCCCACCCATCCGCGTCCAGAACCCTACGAGTGGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCTATCCCTTTATCTCTTATTCTCATCACTGTCCTCACCGCTCTTAAAATCGGCGATAACCTCGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGAGAACAAAGATGATGGTTCAGAAATATCTTTTGAAGAAAAACCAGCTCTTCCACGAACTCGCAACCGCCCTAAAAGAGAAGCTGAAGTTTAA

Protein sequence

MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEENKDDGSEISFEEKPALPRTRNRPKREAEV

Homology

[Close]

BLAST of Cla97C01G007900 vs. NCBI nr
Match: XP_008465810.1 (PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo])

HSP 1 Score: 213.8 bits (543), Expect = 3.7e-52
Identity = 118/134 (88.06%), Postives = 123/134 (91.79%), Query Frame = 0


Query: 1   MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSY 60
           MAR LISTR FPFS  P+APPRAFF P +FSPPVRFSAHPS SRTLRVV TRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEENKDDGSEISFEEKPA 120
           IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDE+ + DG+EISFEEKP 
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEEKPT 120

Query: 121 LPRTRNRPKREAEV 135
           LPRTRNRPKREAEV
Sbjct: 121 LPRTRNRPKREAEV 134

[Close]

BLAST of Cla97C01G007900 vs. NCBI nr
Match: XP_023525740.1 (uncharacterized protein LOC111789252 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 208.0 bits (528), Expect = 2.0e-50
Identity = 115/134 (85.82%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSY 60
           MARLLISTR FPF P P+ P RAFF PS  SP VRFS  PSA+R LRVVTTRAGASTSSY
Sbjct: 1   MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEENKDDGSEISFEEKPA 120
           IFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIMEEDEENKD  SEISFEEKPA
Sbjct: 61  IFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEEKPA 120

Query: 121 LPRTRNRPKREAEV 135
           LPRTRNRPKREAEV
Sbjct: 121 LPRTRNRPKREAEV 134

[Close]

BLAST of Cla97C01G007900 vs. NCBI nr
Match: XP_004140287.1 (PREDICTED: uncharacterized protein LOC101209610 [Cucumis sativus] >KGN51096.1 hypothetical protein Csa_5G440100 [Cucumis sativus])

HSP 1 Score: 206.5 bits (524), Expect = 5.8e-50
Identity = 117/134 (87.31%), Postives = 122/134 (91.04%), Query Frame = 0


Query: 1   MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSY 60
           MAR LISTR FPFS  P+APPR FF PS FSPPVRF A+PS SRTLRVVTTRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEENKDDGSEISFEEKPA 120
           IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDE+  +DGSEISFEEKP 
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDED-YEDGSEISFEEKPT 120

Query: 121 LPRTRNRPKREAEV 135
           +PRTRNRPKREAEV
Sbjct: 121 VPRTRNRPKREAEV 133

[Close]

BLAST of Cla97C01G007900 vs. NCBI nr
Match: XP_022961614.1 (uncharacterized protein LOC111462310 [Cucurbita moschata])

HSP 1 Score: 204.1 bits (518), Expect = 2.9e-49
Identity = 113/133 (84.96%), Postives = 116/133 (87.22%), Query Frame = 0


Query: 1   MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSY 60
           MARLLISTR FPF P P+ P RAFF PS  SP VRFS  PSA+R LRVVTTRAGASTSSY
Sbjct: 12  MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSY 71

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEENKDDGSEISFEEKPA 120
           IFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIMEEDEENKD  SEI FEEKPA
Sbjct: 72  IFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEIPFEEKPA 131

Query: 121 LPRTRNRPKREAE 134
           LPRTRNRPKREAE
Sbjct: 132 LPRTRNRPKREAE 144

[Close]

BLAST of Cla97C01G007900 vs. NCBI nr
Match: XP_022990673.1 (uncharacterized protein LOC111487491 [Cucurbita maxima])

HSP 1 Score: 200.7 bits (509), Expect = 3.2e-48
Identity = 113/132 (85.61%), Postives = 116/132 (87.88%), Query Frame = 0


Query: 1   MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSY 60
           MARLLISTR FPF   P+ P RAFF PS  SP VRFS  PSA+RTLRVVTTRAGASTSSY
Sbjct: 12  MARLLISTRAFPF---PLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSY 71

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEENKDDGSEISFEEKPA 120
           IFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIMEEDEENKD  SEISFEEKPA
Sbjct: 72  IFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEEKPA 131

Query: 121 LPRTRNRPKREA 133
           LPRTRNRPKREA
Sbjct: 132 LPRTRNRPKREA 140

[Close]

BLAST of Cla97C01G007900 vs. TrEMBL
Match: tr|A0A1S3CQ37|A0A1S3CQ37_CUCME (uncharacterized protein LOC103503402 OS=Cucumis melo OX=3656 GN=LOC103503402 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.4e-52
Identity = 118/134 (88.06%), Postives = 123/134 (91.79%), Query Frame = 0


Query: 1   MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSY 60
           MAR LISTR FPFS  P+APPRAFF P +FSPPVRFSAHPS SRTLRVV TRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEENKDDGSEISFEEKPA 120
           IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDE+ + DG+EISFEEKP 
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEEKPT 120

Query: 121 LPRTRNRPKREAEV 135
           LPRTRNRPKREAEV
Sbjct: 121 LPRTRNRPKREAEV 134

[Close]

BLAST of Cla97C01G007900 vs. TrEMBL
Match: tr|A0A0A0KTR1|A0A0A0KTR1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G440100 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.9e-50
Identity = 117/134 (87.31%), Postives = 122/134 (91.04%), Query Frame = 0


Query: 1   MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSY 60
           MAR LISTR FPFS  P+APPR FF PS FSPPVRF A+PS SRTLRVVTTRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEENKDDGSEISFEEKPA 120
           IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDE+  +DGSEISFEEKP 
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDED-YEDGSEISFEEKPT 120

Query: 121 LPRTRNRPKREAEV 135
           +PRTRNRPKREAEV
Sbjct: 121 VPRTRNRPKREAEV 133

[Close]

BLAST of Cla97C01G007900 vs. TrEMBL
Match: tr|A0A2P6S8I2|A0A2P6S8I2_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0319401 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 8.4e-21
Identity = 70/132 (53.03%), Postives = 89/132 (67.42%), Query Frame = 0


Query: 1   MARLLIS-TRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSS 60
           MA+LLIS T   P SPP  +  RA F P    P   F +  S++R +  V TRAG +TS 
Sbjct: 1   MAKLLISNTTSLPLSPPS-SSSRASFNPPHVPPARLFLSGKSSNRGVTTVVTRAGPTTSQ 60

Query: 61  YIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEENKDDGSEISFEEKP 120
           Y+FAF +PLSLI  TV T+++I D LD+ +LEE+A+NQAI E DE   DD  ++S EEK 
Sbjct: 61  YVFAFVLPLSLIAFTVFTSIRIADKLDRDYLEEVAINQAIRETDE---DDEVDMSLEEKA 120

Query: 121 ALPRTRNRPKRE 132
           A+PRTRNRPKRE
Sbjct: 121 AVPRTRNRPKRE 128

[Close]

BLAST of Cla97C01G007900 vs. TrEMBL
Match: tr|A0A251QDA1|A0A251QDA1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G027100 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-20
Identity = 70/133 (52.63%), Postives = 86/133 (64.66%), Query Frame = 0


Query: 1   MARLLISTRLFPFSPPPVAPPRAFFTPS--SFSPPVRFSAHPSASRTLRVVTTRAGASTS 60
           MARLLIS        PP    RA   P     SP  RFS+  +   T   V TRAG +T+
Sbjct: 1   MARLLISNTASLTLSPPAPSSRALLNPPHVPISPATRFSSRQARGLT---VVTRAGPTTN 60

Query: 61  SYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEENKDDGSEISFEEK 120
            Y+FAF +PLSLI +TV T+++I D LD++FLEE+A+NQAI E DE   DD  ++  EEK
Sbjct: 61  QYVFAFVMPLSLIAVTVFTSMRIADKLDEEFLEEIAINQAIRETDE---DDEVDMPIEEK 120

Query: 121 PALPRTRNRPKRE 132
           PALPRTRNRPKRE
Sbjct: 121 PALPRTRNRPKRE 127

[Close]

BLAST of Cla97C01G007900 vs. TrEMBL
Match: tr|A0A2R6R1N8|A0A2R6R1N8_ACTCH (V-set and immunoglobulin domain-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc11147 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 9.3e-20
Identity = 65/119 (54.62%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 17  PVAPPRAFFTPSSF--SPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILIT 76
           P +P R      S   + PVRF    +   +   V TRAG  T++YIFAF +PLSL+ IT
Sbjct: 18  PKSPQRLLLNTLSLPNTAPVRFCLRKTRGSS---VVTRAGPGTNTYIFAFVLPLSLLAIT 77

Query: 77  VLTALKIGDNLDKKFLEELALNQAIMEEDEENKDDGSEISFEEKPALPRTRNRPKREAE 134
           V T+++I D LD++FLEE+A+NQAIME +EE+ D G  +SFEEKP+LPRTRNRPKREAE
Sbjct: 78  VFTSIRIADKLDREFLEEIAVNQAIMEAEEEDGDAG--MSFEEKPSLPRTRNRPKREAE 131

[Close]

BLAST of Cla97C01G007900 vs. TAIR10
Match: AT4G31560.1 (high chlorophyll fluorescence 153)

HSP 1 Score: 78.2 bits (191), Expect = 4.3e-15
Identity = 63/140 (45.00%), Postives = 81/140 (57.86%), Query Frame = 0


Query: 1   MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSA-----SRTLR--VVTTRA 60
           MARL +S    P  P  ++ P +   P   SPP        A     +R +R   V TRA
Sbjct: 1   MARLFVS---IPMQPTQISFPASSSQP-LLSPPANNFTDGGAGGLCLTRRIRDSSVVTRA 60

Query: 61  GASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAI--MEEDEENKDDGS 120
           G STSSY+ AF+IP +LI  TV T++KI D LD+ FLE++ALNQAI   E+ E  + D S
Sbjct: 61  GPSTSSYLLAFAIPATLIAATVFTSIKIADKLDEDFLEDIALNQAIKAAEKGENGEGDIS 120

Query: 121 EISFEEKPALPRTRNRPKRE 132
                ++P L RTRNRPKRE
Sbjct: 121 LDDVIQEPVLQRTRNRPKRE 136

The following BLAST results are available for this feature:

BLAST of Cla97C01G007900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465810.1	3.7e-52	88.06	PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo]	[more]
XP_023525740.1	2.0e-50	85.82	uncharacterized protein LOC111789252 [Cucurbita pepo subsp. pepo]	[more]
XP_004140287.1	5.8e-50	87.31	PREDICTED: uncharacterized protein LOC101209610 [Cucumis sativus] >KGN51096.1 hy...	[more]
XP_022961614.1	2.9e-49	84.96	uncharacterized protein LOC111462310 [Cucurbita moschata]	[more]
XP_022990673.1	3.2e-48	85.61	uncharacterized protein LOC111487491 [Cucurbita maxima]	[more]

BLAST of Cla97C01G007900 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CQ37\|A0A1S3CQ37_CUCME	2.4e-52	88.06	uncharacterized protein LOC103503402 OS=Cucumis melo OX=3656 GN=LOC103503402 PE=...	[more]
tr\|A0A0A0KTR1\|A0A0A0KTR1_CUCSA	3.9e-50	87.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G440100 PE=4 SV=1	[more]
tr\|A0A2P6S8I2\|A0A2P6S8I2_ROSCH	8.4e-21	53.03	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0319401 PE=4...	[more]
tr\|A0A251QDA1\|A0A251QDA1_PRUPE	1.4e-20	52.63	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G027100 PE=4 SV=1	[more]
tr\|A0A2R6R1N8\|A0A2R6R1N8_ACTCH	9.3e-20	54.62	V-set and immunoglobulin domain-containing protein OS=Actinidia chinensis var. c...	[more]

BLAST of Cla97C01G007900 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C01G007900 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G31560.1	4.3e-15	45.00	high chlorophyll fluorescence 153	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0010190	cytochrome b6f complex assembly
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0042651	thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G007900.1	Cla97C01G007900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..134
None	No IPR available	PANTHER	PTHR37753	FAMILY NOT NAMED	coord: 1..132

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G007900	Cla005898	Watermelon (97103) v1	wmwmbB236
Cla97C01G007900	Csa5G440100	Cucumber (Chinese Long) v2	cuwmbB338
Cla97C01G007900	MELO3C005141	Melon (DHL92) v3.5.1	mewmbB009
Cla97C01G007900	ClCG01G007560	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G007900	CSPI05G15530	Wild cucumber (PI 183967)	cpiwmbB351
Cla97C01G007900	Cucsa.335490	Cucumber (Gy14) v1	cgywmbB580
Cla97C01G007900	CmaCh04G022010	Cucurbita maxima (Rimu)	cmawmbB705
Cla97C01G007900	CmaCh15G008300	Cucurbita maxima (Rimu)	cmawmbB289
Cla97C01G007900	CmoCh15G008610	Cucurbita moschata (Rifu)	cmowmbB271
Cla97C01G007900	CmoCh04G023040	Cucurbita moschata (Rifu)	cmowmbB676
Cla97C01G007900	Lsi09G008000	Bottle gourd (USVL1VR-Ls)	lsiwmbB007
Cla97C01G007900	CsGy5G015320	Cucumber (Gy14) v2	cgybwmbB321
Cla97C01G007900	MELO3C005141.2	Melon (DHL92) v3.6.1	medwmbB008
Cla97C01G007900	Carg17734	Silver-seed gourd	carwmbB0501
Cla97C01G007900	Carg01374	Silver-seed gourd	carwmbB0858
Cla97C01G007900	CsaV3_5G024570	Cucumber (Chinese Long) v3	cucwmbB353
Cla97C01G007900	Bhi12G000980	Wax gourd	wgowmbB063

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G007900	Wax gourd	wgowmbB054