MELO3C005088.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005088.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	ethylene-responsive transcription factor LEP
Location	chr09 : 16925694 .. 16926380 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCCATCGCCCTCAAAACCCAAAAGAAAGCACCACCCCCGTTCCCCGGCAGAACCAACGCCCCACCGTTTCCTCGGAGTCCGTCGACGACCCTGGGGTCGTTATGCAGCCGAGATCAGAGACCCTTCAACCAAAGAGCGTCATTGGCTCGGCACCTTCGACACCGCCGAGGAGGCCGCCATTGCCTACGACCGTGCTGCCCGCTCCCTCCGCGGCTCCCTCGCTCGCACCAACTTCCTCTACTCCGACTCTCCGCCGCCTCCTCCGCCACCTTACTCTGCCTCCATTCACCCCAGTCAGCCTCCTCTGTTCCTTCCTCTGCTTCCACCCCCTCCTCCGCCTCTTTTCCACCAATTCCCCCCCGCCGGAGACTCGCCTTCCGGAATAATCTACGGCGATTACGACGGCAGCAGCGCTGAGCTTCCGCCATTTCCTCCGGCAATTTCGTCCGAATCGGAGAATTGTGATTACAATAATTACGGTGCGATGGAATCACAGAACGTTGGATTTGAATGCTTTGATCAATCGTCGATTGGAATGGGGTCGTGTTTGGGATTCGATTCGAGTGGTGATTATATGTATAATCCGATGTTGGGTTCGATGGCGACGGTTTCCGACGCCGGCACCGGTGATCTTCAGTCCCCGGCGGCTAATTTCTATTTGCCTCAGTCTTCAGAGTATTGA

mRNA sequence

ATGAGTCCATCGCCCTCAAAACCCAAAAGAAAGCACCACCCCCGTTCCCCGGCAGAACCAACGCCCCACCGTTTCCTCGGAGTCCGTCGACGACCCTGGGGTCGTTATGCAGCCGAGATCAGAGACCCTTCAACCAAAGAGCGTCATTGGCTCGGCACCTTCGACACCGCCGAGGAGGCCGCCATTGCCTACGACCGTGCTGCCCGCTCCCTCCGCGGCTCCCTCGCTCGCACCAACTTCCTCTACTCCGACTCTCCGCCGCCTCCTCCGCCACCTTACTCTGCCTCCATTCACCCCAGTCAGCCTCCTCTGTTCCTTCCTCTGCTTCCACCCCCTCCTCCGCCTCTTTTCCACCAATTCCCCCCCGCCGGAGACTCGCCTTCCGGAATAATCTACGGCGATTACGACGGCAGCAGCGCTGAGCTTCCGCCATTTCCTCCGGCAATTTCGTCCGAATCGGAGAATTGTGATTACAATAATTACGGTGCGATGGAATCACAGAACGTTGGATTTGAATGCTTTGATCAATCGTCGATTGGAATGGGGTCGTGTTTGGGATTCGATTCGAGTGGTGATTATATGTATAATCCGATGTTGGGTTCGATGGCGACGGTTTCCGACGCCGGCACCGGTGATCTTCAGTCCCCGGCGGCTAATTTCTATTTGCCTCAGTCTTCAGAGTATTGA

Coding sequence (CDS)

ATGAGTCCATCGCCCTCAAAACCCAAAAGAAAGCACCACCCCCGTTCCCCGGCAGAACCAACGCCCCACCGTTTCCTCGGAGTCCGTCGACGACCCTGGGGTCGTTATGCAGCCGAGATCAGAGACCCTTCAACCAAAGAGCGTCATTGGCTCGGCACCTTCGACACCGCCGAGGAGGCCGCCATTGCCTACGACCGTGCTGCCCGCTCCCTCCGCGGCTCCCTCGCTCGCACCAACTTCCTCTACTCCGACTCTCCGCCGCCTCCTCCGCCACCTTACTCTGCCTCCATTCACCCCAGTCAGCCTCCTCTGTTCCTTCCTCTGCTTCCACCCCCTCCTCCGCCTCTTTTCCACCAATTCCCCCCCGCCGGAGACTCGCCTTCCGGAATAATCTACGGCGATTACGACGGCAGCAGCGCTGAGCTTCCGCCATTTCCTCCGGCAATTTCGTCCGAATCGGAGAATTGTGATTACAATAATTACGGTGCGATGGAATCACAGAACGTTGGATTTGAATGCTTTGATCAATCGTCGATTGGAATGGGGTCGTGTTTGGGATTCGATTCGAGTGGTGATTATATGTATAATCCGATGTTGGGTTCGATGGCGACGGTTTCCGACGCCGGCACCGGTGATCTTCAGTCCCCGGCGGCTAATTTCTATTTGCCTCAGTCTTCAGAGTATTGA

Protein sequence

MSPSPSKPKRKHHPRSPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQFPPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIGMGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY

Homology

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BLAST of MELO3C005088.2 vs. NCBI nr
Match: XP_008437672.1 (PREDICTED: ethylene-responsive transcription factor LEP [Cucumis melo])

HSP 1 Score: 355.5 bits (911), Expect = 1.3e-94
Identity = 216/224 (96.43%), Postives = 217/224 (96.88%), Query Frame = 0


Query: 5   PSKPKRKHHPRSPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAY 64
           P  PK    P +PAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAY
Sbjct: 5   PQNPKESTTP-APAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAY 64

Query: 65  DRAARSLRGSLARTNFLYSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFPPAG 124
           DRAARSLRGSLARTNFLYSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFPPAG
Sbjct: 65  DRAARSLRGSLARTNFLYSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFPPAG 124

Query: 125 DSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIGMGSC 184
           DSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIGMGSC
Sbjct: 125 DSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIGMGSC 184

Query: 185 LGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY 229
           LGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY
Sbjct: 185 LGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY 227

[Close]

BLAST of MELO3C005088.2 vs. NCBI nr
Match: XP_004151396.1 (PREDICTED: ethylene-responsive transcription factor LEP-like [Cucumis sativus])

HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83
Identity = 195/229 (85.15%), Postives = 202/229 (88.21%), Query Frame = 0


Query: 1   MSPSPSKPKRKHHPRSPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
           MSPSPSKPKR       AE TPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE+A
Sbjct: 1   MSPSPSKPKRXXXXXXXAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDA 60

Query: 61  AIAYDRAARSLRGSLARTNFLYSD-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 120
           AIAYDRAARSLRGSLARTNFLYSD XXXXXXXXXXXXXXXXXXXX    XXXXXXX   Q
Sbjct: 61  AIAYDRAARSLRGSLARTNFLYSDXXXXXXXXXXXXXXXXXXXXXFLPLXXXXXXXLLHQ 120

Query: 121 FPPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSI 180
           FPPAGDS SGII GDYD +SAELPPFPPAISSES +CDYNNYG MESQNVGFECFDQSSI
Sbjct: 121 FPPAGDSLSGIISGDYD-ASAELPPFPPAISSESVDCDYNNYGVMESQNVGFECFDQSSI 180

Query: 181 GMGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY 229
           G+GSCLGFDSS DY+YNPMLGSM TVSD G GD +SPA NFYLPQSS+Y
Sbjct: 181 GIGSCLGFDSSSDYIYNPMLGSMPTVSDVGAGDFESPAGNFYLPQSSDY 228

[Close]

BLAST of MELO3C005088.2 vs. NCBI nr
Match: XP_023541749.1 (ethylene-responsive transcription factor LEP-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 220.7 bits (561), Expect = 5.1e-54
Identity = 158/228 (69.30%), Postives = 167/228 (73.25%), Query Frame = 0


Query: 1   MSPSPSKPKRKHHPRSPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
           MSPSPSKPK           TPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA
Sbjct: 1   MSPSPSKPK-XXXXXXXXXTTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60

Query: 61  AIAYDRAARSLRGSLARTNFLYSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQF 120
           A+AYD AARSLRGSLARTNFLYSD      XXXXXXXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 61  AVAYDCAARSLRGSLARTNFLYSD----SLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI 120

Query: 121 PPAGDSPSGIIYGDYDGSSAELPPFPPAIS---SESENCDYNNYGAMESQNVGFECFDQS 180
           PP+ DSP  +   D DG  AELPPFPPAIS                ME QN GFE FDQS
Sbjct: 121 PPSRDSPPSLFSVDGDG-GAELPPFPPAISXXXXXXXXXXXXXXXLMELQNSGFEYFDQS 180

Query: 181 SIGMGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQS 226
              +GSC GFDSS +Y++ P+ GSM  VSDAG G+  SPAANFY PQS
Sbjct: 181 PTDIGSCFGFDSSSEYVHGPIFGSMPAVSDAGAGEFLSPAANFYFPQS 222

[Close]

BLAST of MELO3C005088.2 vs. NCBI nr
Match: XP_022141682.1 (ethylene-responsive transcription factor LEP [Momordica charantia])

HSP 1 Score: 220.3 bits (560), Expect = 6.6e-54
Identity = 154/204 (75.49%), Postives = 168/204 (82.35%), Query Frame = 0


Query: 23  HRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGSLARTNFLY 82
           HRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA+AYDRAARSLRGSLARTNFLY
Sbjct: 22  HRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSLRGSLARTNFLY 81

Query: 83  SD-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFPPAGDSPSGIIYGDYDG 142
           SD     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  QFP AGDS S   +  +D 
Sbjct: 82  SDSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDQFPAAGDS-SASFFAGFDD 141

Query: 143 SSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIGMGSCLGFDSSGDYMYNP 202
             AELPPFPPAISSESEN +YNN   ME+QN+G E  DQSS+G+GS  GFDS G+Y+ +P
Sbjct: 142 GGAELPPFPPAISSESENYNYNNC-LMETQNIGLESLDQSSMGIGSYFGFDSGGEYVQSP 201

Query: 203 MLGSMATVSDAGTGDLQSPAANFY 222
           + G+M  VSDA   D +SP ANFY
Sbjct: 202 IFGTMPAVSDALASDFESP-ANFY 222

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BLAST of MELO3C005088.2 vs. NCBI nr
Match: XP_022963669.1 (ethylene-responsive transcription factor LEP-like [Cucurbita moschata])

HSP 1 Score: 214.9 bits (546), Expect = 2.8e-52
Identity = 156/232 (67.24%), Postives = 166/232 (71.55%), Query Frame = 0


Query: 1   MSPSPSKPKRKHHPRSPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
           MSPSPSKPK           TPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA
Sbjct: 1   MSPSPSKPK-XXXXXXXXXTTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60

Query: 61  AIAYDRAARSLRGSLARTNFLYSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQF 120
           A+AYD AARSLRGSLARTNFLYSD      XXXXXXXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 61  AVAYDCAARSLRGSLARTNFLYSD----SLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI 120

Query: 121 PPAGDSPSGIIYGDYDGSSAELPPFPPAIS-------SESENCDYNNYGAMESQNVGFEC 180
           PP+ DSP  +   D DG  AELPPFPPAIS                    ME QN GFE 
Sbjct: 121 PPSRDSPPSLFSVDGDG-GAELPPFPPAISXXXXXXXXXXXXXXXXXXXLMELQNSGFEY 180

Query: 181 FDQSSIGMGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQS 226
           F+QS   +GSC GFDSS +Y++ P+  SM  VSDAG G+  SPAANFY PQS
Sbjct: 181 FNQSPTEIGSCFGFDSSSEYVHGPIFSSMPAVSDAGAGEFPSPAANFYFPQS 226

[Close]

BLAST of MELO3C005088.2 vs. TAIR10
Match: AT5G13910.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 118.2 bits (295), Expect = 6.4e-27
Identity = 60/84 (71.43%), Postives = 69/84 (82.14%), Query Frame = 0


Query: 1  MSPSPSKPKRKHHPRSPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
          M+ + SK K+K       +    RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAEEA
Sbjct: 1  MNTTSSKSKKKQD-----DQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEA 60

Query: 61 AIAYDRAARSLRGSLARTNFLYSD 85
          A+AYDRAARS+RG+ ARTNF+YSD
Sbjct: 61 ALAYDRAARSMRGTRARTNFVYSD 79

[Close]

BLAST of MELO3C005088.2 vs. TAIR10
Match: AT5G18560.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-25
Identity = 52/62 (83.87%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 22  PHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGSLARTNFL 81
           P RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTA EAA+AYDRAA S+RG+ ARTNF+
Sbjct: 52  PGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQARTNFV 111

Query: 82  YS 84
           Y+
Sbjct: 112 YT 113

[Close]

BLAST of MELO3C005088.2 vs. TAIR10
Match: AT1G28160.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 112.5 bits (280), Expect = 3.5e-25
Identity = 50/61 (81.97%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 24 RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGSLARTNFLYS 83
          +++GVRRRPWGRYAAEIR+P+TKER+WLGTFDTAEEAA+AYDRAARS+RG  ARTNF+YS
Sbjct: 38 KYVGVRRRPWGRYAAEIRNPTTKERYWLGTFDTAEEAALAYDRAARSIRGLTARTNFVYS 97

Query: 84 D 85
          D
Sbjct: 98 D 98

[Close]

BLAST of MELO3C005088.2 vs. TAIR10
Match: AT1G12890.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 1.6e-22
Identity = 51/78 (65.38%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 7  KPKRKHHPRSPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDR 66
          K   K   +   +    ++LGVRRRPWGRYAAEIR+P TKERHWLGTFDTAEEAA AYD 
Sbjct: 3  KSSNKRKSKEEKKLQEGKYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAAFAYDV 62

Query: 67 AARSLRGSLARTNFLYSD 85
          AARS+ GSLA TNF Y++
Sbjct: 63 AARSISGSLATTNFFYTE 80

[Close]

BLAST of MELO3C005088.2 vs. TAIR10
Match: AT1G24590.1 (DORNROSCHEN-like)

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-21
Identity = 47/59 (79.66%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 24  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGSLARTNFLY 83
           R+ GVRRRPWGRYAAEIRDP +KER WLGTFDTAEEAA AYD AAR++RG  ARTNF+Y
Sbjct: 57  RYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVY 115

[Close]

BLAST of MELO3C005088.2 vs. Swiss-Prot
Match: sp|Q9M644|LEP_ARATH (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana OX=3702 GN=LEP PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-25
Identity = 60/84 (71.43%), Postives = 69/84 (82.14%), Query Frame = 0


Query: 1  MSPSPSKPKRKHHPRSPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
          M+ + SK K+K       +    RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAEEA
Sbjct: 1  MNTTSSKSKKKQD-----DQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEA 60

Query: 61 AIAYDRAARSLRGSLARTNFLYSD 85
          A+AYDRAARS+RG+ ARTNF+YSD
Sbjct: 61 ALAYDRAARSMRGTRARTNFVYSD 79

[Close]

BLAST of MELO3C005088.2 vs. Swiss-Prot
Match: sp|Q6J9Q2|ERF86_ARATH (Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana OX=3702 GN=ERF086 PE=2 SV=2)

HSP 1 Score: 114.0 bits (284), Expect = 2.2e-24
Identity = 52/62 (83.87%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 22  PHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGSLARTNFL 81
           P RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTA EAA+AYDRAA S+RG+ ARTNF+
Sbjct: 52  PGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQARTNFV 111

Query: 82  YS 84
           Y+
Sbjct: 112 YT 113

[Close]

BLAST of MELO3C005088.2 vs. Swiss-Prot
Match: sp|Q8H3Q1|FZP_ORYSJ (Ethylene-responsive transcription factor FZP OS=Oryza sativa subsp. japonica OX=39947 GN=FZP PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.9e-24
Identity = 51/62 (82.26%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 22  PHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGSLARTNFL 81
           P RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTA+EAA+AYDRAA S++G+ ARTNF+
Sbjct: 55  PGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGAQARTNFV 114

Query: 82  YS 84
           Y+
Sbjct: 115 YT 116

[Close]

BLAST of MELO3C005088.2 vs. Swiss-Prot
Match: sp|Q9FZ90|ERF87_ARATH (Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana OX=3702 GN=ERF087 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.4e-24
Identity = 50/61 (81.97%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 24 RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGSLARTNFLYS 83
          +++GVRRRPWGRYAAEIR+P+TKER+WLGTFDTAEEAA+AYDRAARS+RG  ARTNF+YS
Sbjct: 38 KYVGVRRRPWGRYAAEIRNPTTKERYWLGTFDTAEEAALAYDRAARSIRGLTARTNFVYS 97

Query: 84 D 85
          D
Sbjct: 98 D 98

[Close]

BLAST of MELO3C005088.2 vs. Swiss-Prot
Match: sp|Q3E703|ERF88_ARATH (Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana OX=3702 GN=ERF088 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.0e-21
Identity = 51/78 (65.38%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 7  KPKRKHHPRSPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDR 66
          K   K   +   +    ++LGVRRRPWGRYAAEIR+P TKERHWLGTFDTAEEAA AYD 
Sbjct: 3  KSSNKRKSKEEKKLQEGKYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAAFAYDV 62

Query: 67 AARSLRGSLARTNFLYSD 85
          AARS+ GSLA TNF Y++
Sbjct: 63 AARSISGSLATTNFFYTE 80

[Close]

BLAST of MELO3C005088.2 vs. TrEMBL
Match: tr|A0A1S3AU89|A0A1S3AU89_CUCME (ethylene-responsive transcription factor LEP OS=Cucumis melo OX=3656 GN=LOC103483013 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 8.7e-95
Identity = 216/224 (96.43%), Postives = 217/224 (96.88%), Query Frame = 0


Query: 5   PSKPKRKHHPRSPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAY 64
           P  PK    P +PAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAY
Sbjct: 5   PQNPKESTTP-APAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAY 64

Query: 65  DRAARSLRGSLARTNFLYSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFPPAG 124
           DRAARSLRGSLARTNFLYSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFPPAG
Sbjct: 65  DRAARSLRGSLARTNFLYSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFPPAG 124

Query: 125 DSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIGMGSC 184
           DSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIGMGSC
Sbjct: 125 DSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIGMGSC 184

Query: 185 LGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY 229
           LGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY
Sbjct: 185 LGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY 227

[Close]

BLAST of MELO3C005088.2 vs. TrEMBL
Match: tr|A0A2P6QZY6|A0A2P6QZY6_ROSCH (Putative transcription factor AP2-EREBP family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0428551 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 4.0e-31
Identity = 124/236 (52.54%), Postives = 141/236 (59.75%), Query Frame = 0


Query: 24  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGSLARTNFLYS 83
           RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA+AYDRAARS+RGS ARTNF+YS
Sbjct: 43  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSKARTNFVYS 102

Query: 84  D----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFP 143
           D                          XXXXXXXXXXXXXXXXXXXXXXXX       +P
Sbjct: 103 DMPHGSSVTSIISPDESHRDMSAFFTAXXXXXXXXXXXXXXXXXXXXXXXXTQDPFDAYP 162

Query: 144 PAGDS------PSGIIYGDYDGS-SAELPPFPPAISSESENCDYNNYGAMESQNVGFECF 203
            +G S       SG   GD  GS   ELPP PP++SS         YG  E     F+ F
Sbjct: 163 FSGGSYGSYGPGSGCAVGDGAGSHDNELPPLPPSVSS-------TGYGPGEVMGSDFDGF 222

Query: 204 DQ-------SSIGMGSCLGFDSSGDYMYNPMLGSMATVSDAGTG--DLQSPAANFY 222
            +        S+  GS +GFDS+    ++P+ GSM  VSD+G    DL S +A FY
Sbjct: 223 SEPTTTHGFDSLASGSYMGFDSNEFVQHSPLFGSMPPVSDSGIDGFDLGSSSAYFY 271

[Close]

BLAST of MELO3C005088.2 vs. TrEMBL
Match: tr|A0A218X6G3|A0A218X6G3_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr019827 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.3e-29
Identity = 105/247 (42.51%), Postives = 131/247 (53.04%), Query Frame = 0


Query: 1   MSPSPSKPKRKHHPRSPAE--PTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE 60
           M+PSPSK K+     S  +   +  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE
Sbjct: 1   MNPSPSKGKKTKQSSSSGQSPESSGRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE 60

Query: 61  EAAIAYDRAARSLRGSLARTNFLYSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           EAA+AYD AARS+RG  ARTNF+YSD                        XXXXXXXXXX
Sbjct: 61  EAALAYDLAARSMRGPHARTNFVYSDSPAGSSVTSILSPDEAPHYHNASNXXXXXXXXXX 120

Query: 121 QFPP--------AGDSPSGIIYGDYDGSSAELPPFPPAISSESENC-----------DYN 180
                        G     +   D   SS ELPPFP  +S  S N             + 
Sbjct: 121 XXXXXXXXXXXFQGGFAENVWPADKGSSSYELPPFPSDMSEYSGNAGSGWGHNAEQGTWG 180

Query: 181 NYGAMESQNVGFECFDQSSIGM-----GSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQ 222
           N G++   +     F  S+ G      GS  GF+SSG+Y+++P+   M  VSD+G     
Sbjct: 181 NTGSLACYHDPSSGFSDSTAGFDSGSGGSYFGFESSGEYVHSPLFSQMPPVSDSGPDGFN 240

[Close]

BLAST of MELO3C005088.2 vs. TrEMBL
Match: tr|M5XK05|M5XK05_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G212700 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.9e-29
Identity = 98/238 (41.18%), Postives = 115/238 (48.32%), Query Frame = 0


Query: 24  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGSLARTNFLYS 83
           RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA+AYDRAARS+RGS ARTNF+YS
Sbjct: 43  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSKARTNFVYS 102

Query: 84  --------------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFPPAGDSPSG 143
                         D                                   +P +G S  G
Sbjct: 103 DMPHGSSVTSIISPDESQHDMSAFFATPLQPQPQTTNHQQSFFTQDPFDAYPYSGGSSGG 162

Query: 144 I----------------IYGDYDGSSAELPPFPPAISSESENCDYNNYGAMES-QNVGFE 203
                                   S  ELPP PP +SS    C Y   G M S  ++G+ 
Sbjct: 163 FGXXXXXXXXXXXXXXXXXXXXXXSHTELPPLPPCVSS---TC-YGPDGVMGSDMDMGYF 222

Query: 204 CFDQSSIG-------MGSCLGFDSSGDYMYNPMLGSMATVSDAGTG--DLQSPAANFY 222
            F + +          GS +GFDS+    ++P+ GSM  VSDAG    DL S +A FY
Sbjct: 223 GFSEPTTNNGLDPMMSGSYMGFDSNEFVQHSPLFGSMPPVSDAGIDGFDLGSSSAYFY 276

[Close]

BLAST of MELO3C005088.2 vs. TrEMBL
Match: tr|A0A2C9W391|A0A2C9W391_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G094600 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 7.1e-28
Identity = 124/252 (49.21%), Postives = 145/252 (57.54%), Query Frame = 0


Query: 1   MSPSPSKPKRKHHPRSPAEPTP-----HRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFD 60
           M+PSPSK K+K   + P  PT       RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFD
Sbjct: 1   MNPSPSKTKKKQTHQQPQAPTQAAAGGARFLGVRRRPWGRYAAEIRDPSTKERHWLGTFD 60

Query: 61  TAEEAAIAYDRAARSLRGSLARTNFLYSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           TAEEAA+AYDRAARS+RGS  RTNF+YSD             XXXXXXXXXXXXXXXXXX
Sbjct: 61  TAEEAALAYDRAARSMRGSRTRTNFVYSDMPAGSSVTSIISPXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXQF-----PPA-----------------GDSPSGIIYGDYDGSSA------------- 180
           XXX F     P A                  D  S +  GD  G S+             
Sbjct: 121 XXXXFVSPSQPDAASIINNQQDFSLSQCHFSDEFSSLDGGDIWGCSSITTYNYHEQIPVI 180

Query: 181 ---ELPPFPPAIS-SESENCD-YNNYGAMESQNVGFECFDQSSIGMGSCLGFDSSGDYMY 208
              ELPPFP  IS S S + D     G  ++ + GF   +  + G GS LGFD+S +Y++
Sbjct: 181 TNDELPPFPSDISGSFSSSFDXXXQSGWSDTNSSGFVGLEDQTTG-GSYLGFDTS-EYVH 240

The following BLAST results are available for this feature:

BLAST of MELO3C005088.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437672.1	1.3e-94	96.43	PREDICTED: ethylene-responsive transcription factor LEP [Cucumis melo]	[more]
XP_004151396.1	1.4e-83	85.15	PREDICTED: ethylene-responsive transcription factor LEP-like [Cucumis sativus]	[more]
XP_023541749.1	5.1e-54	69.30	ethylene-responsive transcription factor LEP-like [Cucurbita pepo subsp. pepo]	[more]
XP_022141682.1	6.6e-54	75.49	ethylene-responsive transcription factor LEP [Momordica charantia]	[more]
XP_022963669.1	2.8e-52	67.24	ethylene-responsive transcription factor LEP-like [Cucurbita moschata]	[more]

BLAST of MELO3C005088.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13910.1	6.4e-27	71.43	Integrase-type DNA-binding superfamily protein	[more]
AT5G18560.1	1.2e-25	83.87	Integrase-type DNA-binding superfamily protein	[more]
AT1G28160.1	3.5e-25	81.97	Integrase-type DNA-binding superfamily protein	[more]
AT1G12890.1	1.6e-22	65.38	Integrase-type DNA-binding superfamily protein	[more]
AT1G24590.1	1.1e-21	79.66	DORNROSCHEN-like	[more]

BLAST of MELO3C005088.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M644\|LEP_ARATH	1.2e-25	71.43	Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|Q6J9Q2\|ERF86_ARATH	2.2e-24	83.87	Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q8H3Q1\|FZP_ORYSJ	2.9e-24	82.26	Ethylene-responsive transcription factor FZP OS=Oryza sativa subsp. japonica OX=...	[more]
sp\|Q9FZ90\|ERF87_ARATH	6.4e-24	81.97	Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q3E703\|ERF88_ARATH	3.0e-21	65.38	Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of MELO3C005088.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AU89\|A0A1S3AU89_CUCME	8.7e-95	96.43	ethylene-responsive transcription factor LEP OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
tr\|A0A2P6QZY6\|A0A2P6QZY6_ROSCH	4.0e-31	52.54	Putative transcription factor AP2-EREBP family OS=Rosa chinensis OX=74649 GN=Rch...	[more]
tr\|A0A218X6G3\|A0A218X6G3_PUNGR	1.3e-29	42.51	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr019827 PE=4 SV=1	[more]
tr\|M5XK05\|M5XK05_PRUPE	4.9e-29	41.18	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G212700 PE=4 SV=1	[more]
tr\|A0A2C9W391\|A0A2C9W391_MANES	7.1e-28	49.21	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G094600 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR036955	AP2/ERF_dom_sf
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0010432	bract development
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0010451	floral meristem growth
biological_process	GO:0010102	lateral root morphogenesis
biological_process	GO:0010030	positive regulation of seed germination
biological_process	GO:0009739	response to gibberellin
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0044212	transcription regulatory region DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005088.2.1	MELO3C005088.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 25..36 score: 53.33 coord: 47..63 score: 68.88
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 24..87 e-value: 5.0E-34 score: 129.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 27..73 e-value: 4.8E-11 score: 42.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 24..81 score: 20.468
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 24..80 e-value: 1.62455E-29 score: 105.431
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 23..82 e-value: 6.3E-28 score: 98.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	PANTHER	PTHR31677:SF40	SUBFAMILY NOT NAMED	coord: 2..93
None	No IPR available	PANTHER	PTHR31677	FAMILY NOT NAMED	coord: 2..93
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 25..82

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005088.2	CsaUNG003730	Cucumber (Chinese Long) v2	cumedB079
MELO3C005088.2	CSPIUnG00170	Wild cucumber (PI 183967)	cpimedB562
MELO3C005088.2	Cucsa.300100	Cucumber (Gy14) v1	cgymedB492
MELO3C005088.2	CmaCh04G022290	Cucurbita maxima (Rimu)	cmamedB721
MELO3C005088.2	CmoCh04G023280	Cucurbita moschata (Rifu)	cmomedB714
MELO3C005088.2	Lsi09G008380	Bottle gourd (USVL1VR-Ls)	lsimedB014
MELO3C005088.2	Cp4.1LG01g19260	Cucurbita pepo (Zucchini)	cpemedB419
MELO3C005088.2	CsGy5G013880	Cucumber (Gy14) v2	cgybmedB295
MELO3C005088.2	Cla009063	Watermelon (97103) v1	medwmB031
MELO3C005088.2	ClCG01G007910	Watermelon (Charleston Gray)	medwcgB018
MELO3C005088.2	Cla97C01G008260	Watermelon (97103) v2	medwmbB008
MELO3C005088.2	Bhi12G000936	Wax gourd	medwgoB003
MELO3C005088.2	Carg17759	Silver-seed gourd	carmedB0487
MELO3C005088.2	CsaV3_5G021950	Cucumber (Chinese Long) v3	cucmedB344

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C005088.2	Cucurbita maxima (Rimu)	cmamedB286
MELO3C005088.2	Cucurbita moschata (Rifu)	cmomedB272
MELO3C005088.2	Cucurbita pepo (Zucchini)	cpemedB184
MELO3C005088.2	Silver-seed gourd	carmedB0832