CsaUNG003730 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaUNG003730
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Ethylene-responsive transcription factor; contains IPR016177 (DNA-binding, integrase-type)
Location	Scaffold000122 : 3939 .. 4659 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACACATTAAAACCTTCTTCTTCTCTTACACAAATGAGTCCATCGCCCTCCAAACCCAAAAGAAAGCACCACCCCCCGCCCCCCGCAGAATCTACGCCCCACCGTTTCCTCGGAGTCCGTCGACGACCCTGGGGTCGATATGCCGCCGAGATCAGAGATCCTTCCACCAAAGAGCGTCATTGGCTCGGCACCTTCGACACCGCCGAGGACGCCGCCATTGCCTACGACCGTGCTGCCCGCTCCCTCCGCGGCTCCCTCGCTCGCACCAACTTCCTCTACTCCGACTCTCCGCCCCCTCCTCCCCCACTCTACTCTGCCTCCATTCACCACCCCAATCAGCCTCCTCTGTTTCTTCCTCTGCTTCCACCCACTCCTCCCTCTCTTCTCCACCAATTCCCCCCCGCCGGAGACTCCCTTTCCGGAATCATCTCCGGCGATTACGACGCCAGCGCTGAGCTTCCGCCATTTCCTCCGGCGATTTCCTCGGAATCGGTGGATTGTGATTATAATAATTACGGTGTGATGGAATCGCAGAACGTTGGATTTGAATGCTTTGATCAATCATCAATTGGAATCGGGTCGTGTTTGGGATTTGATTCGAGCAGTGATTATATATATAATCCGATGTTGGGTTCGATGCCGACGGTTTCCGACGTCGGCGCCGGTGATTTTGAGTCCCCGGCGGGTAATTTCTATTTGCCTCAGTCTTCAGATTACTGA

mRNA sequence

ATGAGTCCATCGCCCTCCAAACCCAAAAGAAAGCACCACCCCCCGCCCCCCGCAGAATCTACGCCCCACCGTTTCCTCGGAGTCCGTCGACGACCCTGGGGTCGATATGCCGCCGAGATCAGAGATCCTTCCACCAAAGAGCGTCATTGGCTCGGCACCTTCGACACCGCCGAGGACGCCGCCATTGCCTACGACCGTGCTGCCCGCTCCCTCCGCGGCTCCCTCGCTCGCACCAACTTCCTCTACTCCGACTCTCCGCCCCCTCCTCCCCCACTCTACTCTGCCTCCATTCACCACCCCAATCAGCCTCCTCTGTTTCTTCCTCTGCTTCCACCCACTCCTCCCTCTCTTCTCCACCAATTCCCCCCCGCCGGAGACTCCCTTTCCGGAATCATCTCCGGCGATTACGACGCCAGCGCTGAGCTTCCGCCATTTCCTCCGGCGATTTCCTCGGAATCGGTGGATTGTGATTATAATAATTACGGTGTGATGGAATCGCAGAACGTTGGATTTGAATGCTTTGATCAATCATCAATTGGAATCGGGTCGTGTTTGGGATTTGATTCGAGCAGTGATTATATATATAATCCGATGTTGGGTTCGATGCCGACGGTTTCCGACGTCGGCGCCGGTGATTTTGAGTCCCCGGCGGGTAATTTCTATTTGCCTCAGTCTTCAGATTACTGA

Coding sequence (CDS)

ATGAGTCCATCGCCCTCCAAACCCAAAAGAAAGCACCACCCCCCGCCCCCCGCAGAATCTACGCCCCACCGTTTCCTCGGAGTCCGTCGACGACCCTGGGGTCGATATGCCGCCGAGATCAGAGATCCTTCCACCAAAGAGCGTCATTGGCTCGGCACCTTCGACACCGCCGAGGACGCCGCCATTGCCTACGACCGTGCTGCCCGCTCCCTCCGCGGCTCCCTCGCTCGCACCAACTTCCTCTACTCCGACTCTCCGCCCCCTCCTCCCCCACTCTACTCTGCCTCCATTCACCACCCCAATCAGCCTCCTCTGTTTCTTCCTCTGCTTCCACCCACTCCTCCCTCTCTTCTCCACCAATTCCCCCCCGCCGGAGACTCCCTTTCCGGAATCATCTCCGGCGATTACGACGCCAGCGCTGAGCTTCCGCCATTTCCTCCGGCGATTTCCTCGGAATCGGTGGATTGTGATTATAATAATTACGGTGTGATGGAATCGCAGAACGTTGGATTTGAATGCTTTGATCAATCATCAATTGGAATCGGGTCGTGTTTGGGATTTGATTCGAGCAGTGATTATATATATAATCCGATGTTGGGTTCGATGCCGACGGTTTCCGACGTCGGCGCCGGTGATTTTGAGTCCCCGGCGGGTAATTTCTATTTGCCTCAGTCTTCAGATTACTGA

Protein sequence

MSPSPSKPKRKHHPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSLSGIISGDYDASAELPPFPPAISSESVDCDYNNYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPMLGSMPTVSDVGAGDFESPAGNFYLPQSSDY*

Homology

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BLAST of CsaUNG003730 vs. Swiss-Prot
Match: LEP_ARATH (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.2e-36
Identity = 97/225 (43.11%), Postives = 121/225 (53.78%), Query Frame = 1


Query: 1   MSPSPSKPKRKHHPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDA 60
           M+ + SK K+K       +    RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAE+A
Sbjct: 1   MNTTSSKSKKKQD-----DQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEA 60

Query: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQ 120
           A+AYDRAARS+RG+ ARTNF+YSD PP        SI  P+ PP      PP PP     
Sbjct: 61  ALAYDRAARSMRGTRARTNFVYSDMPPSSS---VTSIVSPDDPP------PPPPPPA--- 120

Query: 121 FPPAGDSLSGIISGDYDASAELPPFPPAISSESVDCD-YNNYGVMESQNVGFECFDQSSI 180
            PP+ D +  ++  +  +S + P   P        CD  ++Y    SQ+    C+   S 
Sbjct: 121 -PPSNDPVDYMMMFNQYSSTDSPMLQP-------HCDQVDSYMFGGSQSSNSYCYSNDSS 180

Query: 181 G---------IGSC--------LGFDSSSDYIYNPMLGSMPTVSD 208
                       SC         G D SS+Y+++PM   MP VSD
Sbjct: 181 NELPPLPSDLSNSCYSQPQWTWTGDDYSSEYVHSPMFSRMPPVSD 200

[Close]

BLAST of CsaUNG003730 vs. Swiss-Prot
Match: ERF86_ARATH (Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana GN=ERF086 PE=2 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 2.6e-25
Identity = 59/98 (60.20%), Postives = 69/98 (70.41%), Query Frame = 1


Query: 19  ESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSLRGSLART 78
           ++ P RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTA +AA+AYDRAA S+RG+ ART
Sbjct: 49  QAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQART 108

Query: 79  NFLYSDSPP----PPPPLYSASIHHPNQPPLFLPLLPP 113
           NF+Y+ +        P L+S  +   N    FLP   P
Sbjct: 109 NFVYTPTDVHTILTNPNLHSLIVSPYNNNQSFLPNSSP 146

[Close]

BLAST of CsaUNG003730 vs. Swiss-Prot
Match: ERF87_ARATH (Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana GN=ERF087 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.4e-25
Identity = 56/90 (62.22%), Postives = 66/90 (73.33%), Query Frame = 1


Query: 4   SPSKPKRKHH-------PPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDT 63
           S S+ K+ H        P P       +++GVRRRPWGRYAAEIR+P+TKER+WLGTFDT
Sbjct: 11  SCSRSKKSHRQKQQQPQPQPQQHIEEIKYVGVRRRPWGRYAAEIRNPTTKERYWLGTFDT 70

Query: 64  AEDAAIAYDRAARSLRGSLARTNFLYSDSP 87
           AE+AA+AYDRAARS+RG  ARTNF+YSD P
Sbjct: 71  AEEAALAYDRAARSIRGLTARTNFVYSDMP 100

[Close]

BLAST of CsaUNG003730 vs. Swiss-Prot
Match: ERF88_ARATH (Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana GN=ERF088 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.5e-22
Identity = 48/62 (77.42%), Postives = 54/62 (87.10%), Query Frame = 1


Query: 24 RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSLRGSLARTNFLYS 83
          ++LGVRRRPWGRYAAEIR+P TKERHWLGTFDTAE+AA AYD AARS+ GSLA TNF Y+
Sbjct: 20 KYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAAFAYDVAARSISGSLATTNFFYT 79

Query: 84 DS 86
          ++
Sbjct: 80 EN 81

[Close]

BLAST of CsaUNG003730 vs. Swiss-Prot
Match: ESR1_ARATH (Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana GN=ESR1 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.5e-22
Identity = 52/79 (65.82%), Postives = 57/79 (72.15%), Query Frame = 1


Query: 18  AESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSLRGSLAR 77
           A S+  R+ GVRRRPWGRYAAEIRDP +KER WLGTFDTAE AA AYD AAR+ RG+ AR
Sbjct: 50  AGSSTTRYRGVRRRPWGRYAAEIRDPMSKERRWLGTFDTAEQAACAYDSAARAFRGAKAR 109

Query: 78  TNFLYSDSPPPPPPLYSAS 97
           TNF Y  +   P P +S S
Sbjct: 110 TNFTYPTAVIMPEPRFSFS 128

[Close]

BLAST of CsaUNG003730 vs. TrEMBL
Match: M5XK05_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018569mg PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 9.1e-38
Identity = 109/263 (41.44%), Postives = 134/263 (50.95%), Query Frame = 1


Query: 4   SPSKPKRKHHPPPPAESTPH-------RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDT 63
           S SK KRK       +           RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDT
Sbjct: 16  SSSKTKRKQQNQQTQQPQQQQQQQQETRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDT 75

Query: 64  AEDAAIAYDRAARSLRGSLARTNFLYSDSP--PPPPPLYSASIHHPNQPPLFLPLLPPTP 123
           AE+AA+AYDRAARS+RGS ARTNF+YSD P       + S      +    F   L P P
Sbjct: 76  AEEAALAYDRAARSMRGSKARTNFVYSDMPHGSSVTSIISPDESQHDMSAFFATPLQPQP 135

Query: 124 PSLLHQ-----------FPPAGDSLSGIISGDY-----------------DASAELPPFP 183
            +  HQ           +P +G S  G  SG Y                  +  ELPP P
Sbjct: 136 QTTNHQQSFFTQDPFDAYPYSGGSSGGFGSGSYGPVSGGDEPGSGSGSGSQSHTELPPLP 195

Query: 184 PAISSESVDCDYNNYGVMES-QNVGFECFDQSSIG-------IGSCLGFDSSSDYIYNPM 222
           P +SS      Y   GVM S  ++G+  F + +          GS +GFDS+    ++P+
Sbjct: 196 PCVSSTC----YGPDGVMGSDMDMGYFGFSEPTTNNGLDPMMSGSYMGFDSNEFVQHSPL 255

[Close]

BLAST of CsaUNG003730 vs. TrEMBL
Match: A0A0A0KYM7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G007070 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.5e-35
Identity = 104/225 (46.22%), Postives = 120/225 (53.33%), Query Frame = 1


Query: 2   SPSPSKPKRKHHPP--PPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAED 61
           S S SKP++        P +  P RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAED
Sbjct: 12  SSSSSKPRKSKQQDGQQPLQQEPTRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAED 71

Query: 62  AAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTP----- 121
           AA+AYDRAARS+RGS ARTNF+YSD P         SI  P++  L+    PPTP     
Sbjct: 72  AALAYDRAARSMRGSKARTNFVYSDMPHGSS---VTSIISPDESQLY----PPTPTQPNH 131

Query: 122 ----PSLLHQFP-----PAGDSLSGII----SGDYDASAELPPFPPAISSESVDC----D 181
               P     FP     P  DS   +     +G  +  AELPP PP  SS   DC    D
Sbjct: 132 LCFDPFTTSSFPGNDWLPDSDSYQPVTAFMDNGITNDDAELPPLPPDASSSYNDCAAMVD 191

Query: 182 YNNYGVME-------SQNVGFECFDQSSIGIGSCLGFDSSSDYIY 196
           ++             + N  F  F  +S   G   GF SSS Y Y
Sbjct: 192 WSTASSSSTSSFMGFNSNAVFPSFPDTSTSDG--FGFGSSSTYFY 227

[Close]

BLAST of CsaUNG003730 vs. TrEMBL
Match: A0A059AQP3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01576 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.7e-34
Identity = 102/250 (40.80%), Postives = 125/250 (50.00%), Query Frame = 1


Query: 2   SPSPSKPKRKHHPPPPAESTPH--RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAED 61
           SPS S    K  PP    S     RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE+
Sbjct: 3   SPSSSSKGNKKQPPAGESSAAGGGRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEE 62

Query: 62  AAIAYDRAARSLRGSLARTNFLYSDSPPPPP----------------PLYSASIHHPNQP 121
           AA+AYDRAARS+RGS ARTNF+YSD P                    P+++ S   P+  
Sbjct: 63  AALAYDRAARSMRGSRARTNFVYSDLPAGSSVTSILSPDEAQQQNFSPIFANSAPRPDPA 122

Query: 122 PL-----FLPLLPPTPPSLLHQFP--PAGDSLSGIISGDYDASAELPPFPPAISSES--- 181
           P      +      T      Q    P G    G  S  +  + ELPP P  +S  S   
Sbjct: 123 PQLDAGGYAESAWSTSAYYSQQADAAPYGGGGGGAYSQCHYDNVELPPLPSDMSGYSGYS 182

Query: 182 -VDCDYNNYGVMESQNVGFECFDQSSI-GIGSCLGFDSSSDYIYNPMLGSMPTVSDVGAG 222
             D    +YG     N   +  D ++  G G   GFDS+ +Y+++P+   MP VSD    
Sbjct: 183 GSDTSSYSYGDTVPSNCYSDFHDPAAASGNGPSFGFDSTEEYVHSPLFSRMPPVSDSVPD 242

[Close]

BLAST of CsaUNG003730 vs. TrEMBL
Match: D7M5X8_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_909345 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.7e-34
Identity = 96/225 (42.67%), Postives = 124/225 (55.11%), Query Frame = 1


Query: 1   MSPSPSKPKRKHHPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDA 60
           M+ + SK K+K       +    RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAE+A
Sbjct: 1   MNTTSSKSKKKQD-----DQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEA 60

Query: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQ 120
           A+AYDRAARS+RG+ ARTNF+YSD PP        SI  P+ PP      PP PP     
Sbjct: 61  ALAYDRAARSMRGTRARTNFVYSDMPPSSS---VTSIISPDDPP------PPPPPPA--- 120

Query: 121 FPPAGDSLSGIISGDYDASAELPPFPPAISSESVDCD-YNNYGVMESQNVGFECFDQSSI 180
            PP+ D +  ++  +  +S + P   P        CD  ++Y    SQ+    C+  +S 
Sbjct: 121 -PPSNDPVDYMMMFNQYSSTDSPMLQP-------HCDQVDSYMFGGSQSTNSYCYSNNSS 180

Query: 181 G---------IGSCL--------GFDSSSDYIYNPMLGSMPTVSD 208
                       SC         G D S++Y+++PM   MP VSD
Sbjct: 181 NELPPLPSDLSNSCYSQPQWTWSGDDYSAEYVHSPMFSRMPPVSD 200

[Close]

BLAST of CsaUNG003730 vs. TrEMBL
Match: A0A067L3S2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26896 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.0e-33
Identity = 104/265 (39.25%), Postives = 131/265 (49.43%), Query Frame = 1


Query: 1   MSPSPSKPKRKHHPPPPAESTPH--RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE 60
           M+PSPSK K+K   P   E      RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAE
Sbjct: 1   MNPSPSKSKKKQATPQQQEPAAQGGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAE 60

Query: 61  DAAIAYDRAARSLRGSLARTNFLYSDSP---------PPPPPLYSASIHHPNQ------- 120
           +AA+AYDRAAR++RGS ARTNF+YSD P          P       S+H   Q       
Sbjct: 61  EAALAYDRAARNMRGSRARTNFVYSDMPAGSSVTSIISPDEQQQIHSLHQQQQQQQLEHY 120

Query: 121 -PPLFLPLLPPTPPSLL--HQFPPAGDSLSGIISGDYDA--------------------S 180
              +F+P      P  L  H F           S D+ +                    +
Sbjct: 121 NASMFVPPAQSNQPDPLSFHDFSSVSQC---HFSNDFSSMIGPDTWSCSSSTYQEPVITN 180

Query: 181 AELPPFPPAIS---SESVDCDYNNYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYN 222
            ELPP P  +S   S SV      +    +   GFE    S  G GS  GFD S +Y+++
Sbjct: 181 DELPPLPCDLSSNFSSSVGSGLMGFEEQTTLTNGFE----SVSGSGSYFGFD-SGEYVHS 240

[Close]

BLAST of CsaUNG003730 vs. TAIR10
Match: AT5G13910.1 (AT5G13910.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 152.9 bits (385), Expect = 2.4e-37
Identity = 97/225 (43.11%), Postives = 121/225 (53.78%), Query Frame = 1


Query: 1   MSPSPSKPKRKHHPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDA 60
           M+ + SK K+K       +    RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAE+A
Sbjct: 1   MNTTSSKSKKKQD-----DQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEA 60

Query: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQ 120
           A+AYDRAARS+RG+ ARTNF+YSD PP        SI  P+ PP      PP PP     
Sbjct: 61  ALAYDRAARSMRGTRARTNFVYSDMPPSSS---VTSIVSPDDPP------PPPPPPA--- 120

Query: 121 FPPAGDSLSGIISGDYDASAELPPFPPAISSESVDCD-YNNYGVMESQNVGFECFDQSSI 180
            PP+ D +  ++  +  +S + P   P        CD  ++Y    SQ+    C+   S 
Sbjct: 121 -PPSNDPVDYMMMFNQYSSTDSPMLQP-------HCDQVDSYMFGGSQSSNSYCYSNDSS 180

Query: 181 G---------IGSC--------LGFDSSSDYIYNPMLGSMPTVSD 208
                       SC         G D SS+Y+++PM   MP VSD
Sbjct: 181 NELPPLPSDLSNSCYSQPQWTWTGDDYSSEYVHSPMFSRMPPVSD 200

[Close]

BLAST of CsaUNG003730 vs. TAIR10
Match: AT5G18560.1 (AT5G18560.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 117.1 bits (292), Expect = 1.4e-26
Identity = 59/98 (60.20%), Postives = 69/98 (70.41%), Query Frame = 1


Query: 19  ESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSLRGSLART 78
           ++ P RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTA +AA+AYDRAA S+RG+ ART
Sbjct: 49  QAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQART 108

Query: 79  NFLYSDSPP----PPPPLYSASIHHPNQPPLFLPLLPP 113
           NF+Y+ +        P L+S  +   N    FLP   P
Sbjct: 109 NFVYTPTDVHTILTNPNLHSLIVSPYNNNQSFLPNSSP 146

[Close]

BLAST of CsaUNG003730 vs. TAIR10
Match: AT1G28160.1 (AT1G28160.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 116.3 bits (290), Expect = 2.5e-26
Identity = 56/90 (62.22%), Postives = 66/90 (73.33%), Query Frame = 1


Query: 4   SPSKPKRKHH-------PPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDT 63
           S S+ K+ H        P P       +++GVRRRPWGRYAAEIR+P+TKER+WLGTFDT
Sbjct: 11  SCSRSKKSHRQKQQQPQPQPQQHIEEIKYVGVRRRPWGRYAAEIRNPTTKERYWLGTFDT 70

Query: 64  AEDAAIAYDRAARSLRGSLARTNFLYSDSP 87
           AE+AA+AYDRAARS+RG  ARTNF+YSD P
Sbjct: 71  AEEAALAYDRAARSIRGLTARTNFVYSDMP 100

[Close]

BLAST of CsaUNG003730 vs. TAIR10
Match: AT1G12890.1 (AT1G12890.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 106.7 bits (265), Expect = 1.9e-23
Identity = 48/62 (77.42%), Postives = 54/62 (87.10%), Query Frame = 1


Query: 24 RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSLRGSLARTNFLYS 83
          ++LGVRRRPWGRYAAEIR+P TKERHWLGTFDTAE+AA AYD AARS+ GSLA TNF Y+
Sbjct: 20 KYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAAFAYDVAARSISGSLATTNFFYT 79

Query: 84 DS 86
          ++
Sbjct: 80 EN 81

[Close]

BLAST of CsaUNG003730 vs. TAIR10
Match: AT1G12980.1 (AT1G12980.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 106.3 bits (264), Expect = 2.5e-23
Identity = 52/79 (65.82%), Postives = 57/79 (72.15%), Query Frame = 1


Query: 18  AESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSLRGSLAR 77
           A S+  R+ GVRRRPWGRYAAEIRDP +KER WLGTFDTAE AA AYD AAR+ RG+ AR
Sbjct: 50  AGSSTTRYRGVRRRPWGRYAAEIRDPMSKERRWLGTFDTAEQAACAYDSAARAFRGAKAR 109

Query: 78  TNFLYSDSPPPPPPLYSAS 97
           TNF Y  +   P P +S S
Sbjct: 110 TNFTYPTAVIMPEPRFSFS 128

[Close]

BLAST of CsaUNG003730 vs. NCBI nr
Match: gi|449467369|ref|XP_004151396.1| (PREDICTED: ethylene-responsive transcription factor LEP-like [Cucumis sativus])

HSP 1 Score: 484.2 bits (1245), Expect = 1.3e-133
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1


Query: 1   MSPSPSKPKRKHHPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDA 60
           MSPSPSKPKRKHHPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDA
Sbjct: 1   MSPSPSKPKRKHHPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDA 60

Query: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQ 120
           AIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQ
Sbjct: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQ 120

Query: 121 FPPAGDSLSGIISGDYDASAELPPFPPAISSESVDCDYNNYGVMESQNVGFECFDQSSIG 180
           FPPAGDSLSGIISGDYDASAELPPFPPAISSESVDCDYNNYGVMESQNVGFECFDQSSIG
Sbjct: 121 FPPAGDSLSGIISGDYDASAELPPFPPAISSESVDCDYNNYGVMESQNVGFECFDQSSIG 180

Query: 181 IGSCLGFDSSSDYIYNPMLGSMPTVSDVGAGDFESPAGNFYLPQSSDY 229
           IGSCLGFDSSSDYIYNPMLGSMPTVSDVGAGDFESPAGNFYLPQSSDY
Sbjct: 181 IGSCLGFDSSSDYIYNPMLGSMPTVSDVGAGDFESPAGNFYLPQSSDY 228

[Close]

BLAST of CsaUNG003730 vs. NCBI nr
Match: gi|659074565|ref|XP_008437672.1| (PREDICTED: ethylene-responsive transcription factor LEP [Cucumis melo])

HSP 1 Score: 396.0 bits (1016), Expect = 4.6e-107
Identity = 192/225 (85.33%), Postives = 200/225 (88.89%), Query Frame = 1


Query: 5   PSKPKRKHHPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAY 64
           P  PK     P PAE TPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE+AAIAY
Sbjct: 5   PQNPKEST-TPAPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAY 64

Query: 65  DRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPA 124
           DRAARSLRGSLARTNFLYSDSPPPPPP YSASI HP+QPPLFLPLLPP PP L HQFPPA
Sbjct: 65  DRAARSLRGSLARTNFLYSDSPPPPPPPYSASI-HPSQPPLFLPLLPPPPPPLFHQFPPA 124

Query: 125 GDSLSGIISGDYD-ASAELPPFPPAISSESVDCDYNNYGVMESQNVGFECFDQSSIGIGS 184
           GDS SGII GDYD +SAELPPFPPAISSES +CDYNNYG MESQNVGFECFDQSSIG+GS
Sbjct: 125 GDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIGMGS 184

Query: 185 CLGFDSSSDYIYNPMLGSMPTVSDVGAGDFESPAGNFYLPQSSDY 229
           CLGFDSS DY+YNPMLGSM TVSD G GD +SPA NFYLPQSS+Y
Sbjct: 185 CLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY 227

[Close]

BLAST of CsaUNG003730 vs. NCBI nr
Match: gi|657995756|ref|XP_008390226.1| (PREDICTED: ethylene-responsive transcription factor LEP-like [Malus domestica])

HSP 1 Score: 166.0 bits (419), Expect = 7.7e-38
Identity = 113/264 (42.80%), Postives = 138/264 (52.27%), Query Frame = 1


Query: 4   SPSKPKRKHHPPP---PAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDA 63
           S SK KRK        P      RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE+A
Sbjct: 17  SSSKTKRKQQQQQTQQPQTQQETRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 76

Query: 64  AIAYDRAARSLRGSLARTNFLYSDSP--PPPPPLYSASIHHPNQPPLFLPLLPPT----- 123
           A+AYDRAARS+RGS ARTNF+YSD P       + S      +    F   LP T     
Sbjct: 77  ALAYDRAARSMRGSKARTNFVYSDMPHGSSVTSIISPDESQRDMSAFFTTPLPQTHSQSQ 136

Query: 124 ----PPSLLHQFP------PAGDS----------LSGIISGD--YDASA---ELPPFPPA 183
                P   HQ P        G S          +SG+++ +  Y + +   ELPP PP 
Sbjct: 137 THTQQPIFTHQDPFDAYTVSGGSSTEFGSGSYGPISGVVADESGYQSQSHTHELPPLPPC 196

Query: 184 ISSESVDCDYNNYGVMESQNV----GFECFDQ-------SSIGIGSCLGFDSSSDYIYNP 222
           +SS +    Y   G+M S  V    GF  F Q        S+  GS +GFDS+    ++P
Sbjct: 197 VSSSTC---YEPEGIMSSDGVWNESGFYGFSQPTTNNGLDSLVSGSYVGFDSNEFVQHSP 256

[Close]

BLAST of CsaUNG003730 vs. NCBI nr
Match: gi|596268947|ref|XP_007225065.1| (hypothetical protein PRUPE_ppa018569mg [Prunus persica])

HSP 1 Score: 165.2 bits (417), Expect = 1.3e-37
Identity = 109/263 (41.44%), Postives = 134/263 (50.95%), Query Frame = 1


Query: 4   SPSKPKRKHHPPPPAESTPH-------RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDT 63
           S SK KRK       +           RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDT
Sbjct: 16  SSSKTKRKQQNQQTQQPQQQQQQQQETRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDT 75

Query: 64  AEDAAIAYDRAARSLRGSLARTNFLYSDSP--PPPPPLYSASIHHPNQPPLFLPLLPPTP 123
           AE+AA+AYDRAARS+RGS ARTNF+YSD P       + S      +    F   L P P
Sbjct: 76  AEEAALAYDRAARSMRGSKARTNFVYSDMPHGSSVTSIISPDESQHDMSAFFATPLQPQP 135

Query: 124 PSLLHQ-----------FPPAGDSLSGIISGDY-----------------DASAELPPFP 183
            +  HQ           +P +G S  G  SG Y                  +  ELPP P
Sbjct: 136 QTTNHQQSFFTQDPFDAYPYSGGSSGGFGSGSYGPVSGGDEPGSGSGSGSQSHTELPPLP 195

Query: 184 PAISSESVDCDYNNYGVMES-QNVGFECFDQSSIG-------IGSCLGFDSSSDYIYNPM 222
           P +SS      Y   GVM S  ++G+  F + +          GS +GFDS+    ++P+
Sbjct: 196 PCVSSTC----YGPDGVMGSDMDMGYFGFSEPTTNNGLDPMMSGSYMGFDSNEFVQHSPL 255

[Close]

BLAST of CsaUNG003730 vs. NCBI nr
Match: gi|694325050|ref|XP_009353495.1| (PREDICTED: ethylene-responsive transcription factor ERF087-like [Pyrus x bretschneideri])

HSP 1 Score: 164.1 bits (414), Expect = 2.9e-37
Identity = 114/264 (43.18%), Postives = 135/264 (51.14%), Query Frame = 1


Query: 4   SPSKPKRKHHPPP---PAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDA 63
           S SK KRK        P      RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE+A
Sbjct: 17  SSSKTKRKQQQQQTQQPQTQQETRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 76

Query: 64  AIAYDRAARSLRGSLARTNFLYSDSP--PPPPPLYSASIHHPNQPPLFLPLLPPT----- 123
           A+AYDRAARS+RGS ARTNF+YSD P       + S      +    F   LP T     
Sbjct: 77  ALAYDRAARSMRGSKARTNFVYSDMPHGSSVTSIISPDESQRDMSAFFTNPLPETHSQSQ 136

Query: 124 ----PPSLLHQFP-----PAGDSLSGIISGDY--------DASA--------ELPPFPPA 183
                P   HQ P      +G S +   SG Y        D S         ELPP PP 
Sbjct: 137 THTQQPFFTHQDPFDAYTVSGGSSTEFGSGSYGPTPGVVADESGYQSESHTHELPPLPPC 196

Query: 184 ISSESVDCDYNNYGVMESQNV----GFECFDQ-------SSIGIGSCLGFDSSSDYIYNP 222
           +SS +    Y   G+M S  V    GF  F +        S+  GS +GFDS+    ++P
Sbjct: 197 VSSSTC---YGPEGIMSSDGVWNESGFYGFSEPTTNNGLDSMVSGSYVGFDSNEFVQHSP 256

The following BLAST results are available for this feature:

BLAST of CsaUNG003730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LEP_ARATH	4.2e-36	43.11	Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2...	[more]
ERF86_ARATH	2.6e-25	60.20	Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana GN=ERF08...	[more]
ERF87_ARATH	4.4e-25	62.22	Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana GN=ERF08...	[more]
ERF88_ARATH	3.5e-22	77.42	Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana GN=ERF08...	[more]
ESR1_ARATH	4.5e-22	65.82	Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana GN=ESR1 PE...	[more]

BLAST of CsaUNG003730 vs. TrEMBL


Match Name	E-value	Identity	Description
M5XK05_PRUPE	9.1e-38	41.44	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018569mg PE=4 SV=1	[more]
A0A0A0KYM7_CUCSA	5.5e-35	46.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G007070 PE=4 SV=1	[more]
A0A059AQP3_EUCGR	2.7e-34	40.80	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01576 PE=4 SV=1	[more]
D7M5X8_ARALL	4.7e-34	42.67	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]
A0A067L3S2_JATCU	1.0e-33	39.25	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26896 PE=4 SV=1	[more]

BLAST of CsaUNG003730 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13910.1	2.4e-37	43.11	Integrase-type DNA-binding superfamily protein	[more]
AT5G18560.1	1.4e-26	60.20	Integrase-type DNA-binding superfamily protein	[more]
AT1G28160.1	2.5e-26	62.22	Integrase-type DNA-binding superfamily protein	[more]
AT1G12890.1	1.9e-23	77.42	Integrase-type DNA-binding superfamily protein	[more]
AT1G12980.1	2.5e-23	65.82	Integrase-type DNA-binding superfamily protein	[more]

BLAST of CsaUNG003730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449467369\|ref\|XP_004151396.1\|	1.3e-133	100.00	PREDICTED: ethylene-responsive transcription factor LEP-like [Cucumis sativus]	[more]
gi\|659074565\|ref\|XP_008437672.1\|	4.6e-107	85.33	PREDICTED: ethylene-responsive transcription factor LEP [Cucumis melo]	[more]
gi\|657995756\|ref\|XP_008390226.1\|	7.7e-38	42.80	PREDICTED: ethylene-responsive transcription factor LEP-like [Malus domestica]	[more]
gi\|596268947\|ref\|XP_007225065.1\|	1.3e-37	41.44	hypothetical protein PRUPE_ppa018569mg [Prunus persica]	[more]
gi\|694325050\|ref\|XP_009353495.1\|	2.9e-37	43.18	PREDICTED: ethylene-responsive transcription factor ERF087-like [Pyrus x bretsch...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010432	bract development
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0010451	floral meristem growth
biological_process	GO:0010102	lateral root morphogenesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010030	positive regulation of seed germination
biological_process	GO:0009739	response to gibberellin
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0044212	transcription regulatory region DNA binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaUNG003730.1	CsaUNG003730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 47..63 score: 6.3E-8coord: 25..36 score: 6.
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 25..81 score: 3.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 27..73 score: 2.7
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 24..87 score: 7.8
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 24..81 score: 20
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 25..82 score: 6.54
None	No IPR available	PANTHER	PTHR31677	FAMILY NOT NAMED	coord: 24..220 score: 6.6
None	No IPR available	PANTHER	PTHR31677:SF5	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP	coord: 24..220 score: 6.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaUNG003730	Cla009063	Watermelon (97103) v1	cuwmB099
CsaUNG003730	MELO3C005088	Melon (DHL92) v3.5.1	cumeB084
CsaUNG003730	ClCG01G007910	Watermelon (Charleston Gray)	cuwcgB090
CsaUNG003730	Lsi09G008380	Bottle gourd (USVL1VR-Ls)	culsiB086
CsaUNG003730	MELO3C005088.2	Melon (DHL92) v3.6.1	cumedB079
CsaUNG003730	Cla97C01G008260	Watermelon (97103) v2	cuwmbB092
CsaUNG003730	CSPIUnG00170	Wild cucumber (PI 183967)	cpicuB359
CsaUNG003730	Cucsa.300100	Cucumber (Gy14) v1	cgycuB426
CsaUNG003730	CmaCh04G022290	Cucurbita maxima (Rimu)	cmacuB691
CsaUNG003730	CmoCh04G023280	Cucurbita moschata (Rifu)	cmocuB681
CsaUNG003730	Cp4.1LG01g19260	Cucurbita pepo (Zucchini)	cpecuB383
CsaUNG003730	CsGy5G013880	Cucumber (Gy14) v2	cgybcuB204
CsaUNG003730	Carg17759	Silver-seed gourd	carcuB0509

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None