Cucsa.300100 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.300100
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Ethylene-responsive transcription factor, putative
Location	scaffold02925 : 154473 .. 155198 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACCAAACACATTAAAACCTTCTTCTTCTCTTACACAAATGAGTCCATCGCCCTCCAAACCCAAAAGAAAGCACCACCCCCGCCCCCCGCAGAATCTACGCCCCACCGTTTCCTCGGAGTCCGTCGACGACCCTGGGGTCGATATGCCGCCGAGATCAGAGATCCTTCCACCAAAGAGCGTCATTGGCTCGGCACCTTCGACACCGCCGAGGACGCCGCCATTGCCTACGACCGTGCTGCCCGCTCCCTCCGCGGCTCCCTCGCTCGCACCAACTTCCTCTACTCCGACTCTCCGCCCCCTCCTCCCCCACTCTACTCTGCCTCCATTCACCACCCCAATCAGCCTCCTCTGTTTCTTCCTCTGCTTCCACCCACTCCTCCCTCTCTTCTCCACCAATTCCCCCCCGCCGGAGACTCCCTTTCCGGAATCATCTCCGGCGATTACGACGCCAGCGCTGAGCTTCCGCCATTTCCTCCGGCGATTTCCTCGGAATCGGTGGATTGTGATTATAATAATTACGGTGTGATGGAATCGCAGAACGTTGGATTTGAATGCTTTGATCAATCATCAATTGGAATCGGGTCGTGTTTGGGATTTGATTCGAGCAGTGATTATATATATAATCCGATGTTGGGTTCGATGCCGACGGTTTCCGACGTCGGCGCCGGTGATTTTGAGTCCCCGGCGGGTAATTTCTATTTGCCTCAGTCTTCAGATTACTGA

mRNA sequence

CAAACCAAACACATTAAAACCTTCTTCTTCTCTTACACAAATGAGTCCATCGCCCTCCAAACCCAAAAGAAAGCACCACCCCCGCCCCCCGCAGAATCTACGCCCCACCGTTTCCTCGGAGTCCGTCGACGACCCTGGGGTCGATATGCCGCCGAGATCAGAGATCCTTCCACCAAAGAGCGTCATTGGCTCGGCACCTTCGACACCGCCGAGGACGCCGCCATTGCCTACGACCGTGCTGCCCGCTCCCTCCGCGGCTCCCTCGCTCGCACCAACTTCCTCTACTCCGACTctccgccccctcctcccccactctactctgcctccattcaccaccccaatcagcctcctctgtttcttcctctgcttccacccactcctccctctcttcTCCACCAATTCCCCCCCGCCGGAGACTCCCTTTCCGGAATCATCTCCGGCGATTACGACGCCAGCGCTGAGCTTCCGCCATTTCCTCCGGCGATTTCCTCGGAATCGGTGGATTGTGATTATAATAATTACGGTGTGATGGAATCGCAGAACGTTGGATTTGAATGCTTTGATCAATCATCAATTGGAATCGGGTCGTGTTTGGGATTTGATTCGAGCAGTGATTATATATATAATCCGATGTTGGGTTCGATGCCGACGGTTTCCGACGTCGGCGCCGGTGATTTTGAGTCCCCGGCGGGTAATTTCTATTTGCCTCAGTCTTCAGATTACTGA

Coding sequence (CDS)

CAAACCAAACACATTAAAACCTTCTTCTTCTCTTACACAAATGAGTCCATCGCCCTCCAAACCCAAAAGAAAGCACCACCCCCGCCCCCCGCAGAATCTACGCCCCACCGTTTCCTCGGAGTCCGTCGACGACCCTGGGGTCGATATGCCGCCGAGATCAGAGATCCTTCCACCAAAGAGCGTCATTGGCTCGGCACCTTCGACACCGCCGAGGACGCCGCCATTGCCTACGACCGTGCTGCCCGCTCCCTCCGCGGCTCCCTCGCTCGCACCAACTTCCTCTACTCCGACTCTCCGCCCCCTCCTCCCCCACTCTACTCTGCCTCCATTCACCACCCCAATCAGCCTCCTCTGTTTCTTCCTCTGCTTCCACCCACTCCTCCCTCTCTTCTCCACCAATTCCCCCCCGCCGGAGACTCCCTTTCCGGAATCATCTCCGGCGATTACGACGCCAGCGCTGAGCTTCCGCCATTTCCTCCGGCGATTTCCTCGGAATCGGTGGATTGTGATTATAATAATTACGGTGTGATGGAATCGCAGAACGTTGGATTTGAATGCTTTGATCAATCATCAATTGGAATCGGGTCGTGTTTGGGATTTGATTCGAGCAGTGATTATATATATAATCCGATGTTGGGTTCGATGCCGACGGTTTCCGACGTCGGCGCCGGTGATTTTGAGTCCCCGGCGGGTAATTTCTATTTGCCTCAGTCTTCAGATTACTGA

Protein sequence

QTKHIKTFFFSYTNESIALQTQKKAPPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSLSGIISGDYDASAELPPFPPAISSESVDCDYNNYGVMESQNVGFECFDQSSIGIGSCLGFDSSSDYIYNPMLGSMPTVSDVGAGDFESPAGNFYLPQSSDY*

Homology

[Close]

BLAST of Cucsa.300100 vs. Swiss-Prot
Match: LEP_ARATH (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.2e-35
Identity = 92/202 (45.54%), Postives = 114/202 (56.44%), Query Frame = 1


Query: 37  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSLRGSLARTNFLYS 96
           RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAE+AA+AYDRAARS+RG+ ARTNF+YS
Sbjct: 19  RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYDRAARSMRGTRARTNFVYS 78

Query: 97  DSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSLSGIISGDYDASAELP 156
           D PP        SI  P+ PP      PP PP      PP+ D +  ++  +  +S + P
Sbjct: 79  DMPPSSS---VTSIVSPDDPP------PPPPPPA----PPSNDPVDYMMMFNQYSSTDSP 138

Query: 157 PFPPAISSESVDCD-YNNYGVMESQNVGFECFDQSSIG---------IGSC--------L 216
              P        CD  ++Y    SQ+    C+   S             SC         
Sbjct: 139 MLQP-------HCDQVDSYMFGGSQSSNSYCYSNDSSNELPPLPSDLSNSCYSQPQWTWT 198

Query: 217 GFDSSSDYIYNPMLGSMPTVSD 221
           G D SS+Y+++PM   MP VSD
Sbjct: 199 GDDYSSEYVHSPMFSRMPPVSD 200

[Close]

BLAST of Cucsa.300100 vs. Swiss-Prot
Match: ERF87_ARATH (Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana GN=ERF087 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 9.3e-26
Identity = 54/80 (67.50%), Postives = 66/80 (82.50%), Query Frame = 1


Query: 20  QTQKKAPPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDR 79
           Q Q++  P P       +++GVRRRPWGRYAAEIR+P+TKER+WLGTFDTAE+AA+AYDR
Sbjct: 21  QKQQQPQPQPQQHIEEIKYVGVRRRPWGRYAAEIRNPTTKERYWLGTFDTAEEAALAYDR 80

Query: 80  AARSLRGSLARTNFLYSDSP 100
           AARS+RG  ARTNF+YSD P
Sbjct: 81  AARSIRGLTARTNFVYSDMP 100

[Close]

BLAST of Cucsa.300100 vs. Swiss-Prot
Match: ERF86_ARATH (Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana GN=ERF086 PE=2 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 2.7e-25
Identity = 59/98 (60.20%), Postives = 71/98 (72.45%), Query Frame = 1


Query: 32  ESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSLRGSLART 91
           ++ P RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTA +AA+AYDRAA S+RG+ ART
Sbjct: 49  QAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQART 108

Query: 92  NFLYSDSPP----PPPPLYSASIHHPNQPPLFLPLLPP 126
           NF+Y+ +        P L+S  +   N    FLP   P
Sbjct: 109 NFVYTPTDVHTILTNPNLHSLIVSPYNNNQSFLPNSSP 146

[Close]

BLAST of Cucsa.300100 vs. Swiss-Prot
Match: ERF88_ARATH (Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana GN=ERF088 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.7e-22
Identity = 48/62 (77.42%), Postives = 56/62 (90.32%), Query Frame = 1


Query: 37 RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSLRGSLARTNFLYS 96
          ++LGVRRRPWGRYAAEIR+P TKERHWLGTFDTAE+AA AYD AARS+ GSLA TNF Y+
Sbjct: 20 KYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAAFAYDVAARSISGSLATTNFFYT 79

Query: 97 DS 99
          ++
Sbjct: 80 EN 81

[Close]

BLAST of Cucsa.300100 vs. Swiss-Prot
Match: ESR1_ARATH (Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana GN=ESR1 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.8e-22
Identity = 52/79 (65.82%), Postives = 59/79 (74.68%), Query Frame = 1


Query: 31  AESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSLRGSLAR 90
           A S+  R+ GVRRRPWGRYAAEIRDP +KER WLGTFDTAE AA AYD AAR+ RG+ AR
Sbjct: 50  AGSSTTRYRGVRRRPWGRYAAEIRDPMSKERRWLGTFDTAEQAACAYDSAARAFRGAKAR 109

Query: 91  TNFLYSDSPPPPPPLYSAS 110
           TNF Y  +   P P +S S
Sbjct: 110 TNFTYPTAVIMPEPRFSFS 128

[Close]

BLAST of Cucsa.300100 vs. TrEMBL
Match: M5XK05_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018569mg PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.3e-38
Identity = 105/251 (41.83%), Postives = 131/251 (52.19%), Query Frame = 1


Query: 22  QKKAPPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAA 81
           Q + P     +    RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE+AA+AYDRAA
Sbjct: 28  QTQQPQQQQQQQQETRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAA 87

Query: 82  RSLRGSLARTNFLYSDSP--PPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQ------ 141
           RS+RGS ARTNF+YSD P       + S      +    F   L P P +  HQ      
Sbjct: 88  RSMRGSKARTNFVYSDMPHGSSVTSIISPDESQHDMSAFFATPLQPQPQTTNHQQSFFTQ 147

Query: 142 -----FPPAGDSLSGIISGDY-----------------DASAELPPFPPAISSESVDCDY 201
                +P +G S  G  SG Y                  +  ELPP PP +SS      Y
Sbjct: 148 DPFDAYPYSGGSSGGFGSGSYGPVSGGDEPGSGSGSGSQSHTELPPLPPCVSSTC----Y 207

Query: 202 NNYGVMES-QNVGFECFDQSSIG-------IGSCLGFDSSSDYIYNPMLGSMPTVSDVGA 235
              GVM S  ++G+  F + +          GS +GFDS+    ++P+ GSMP VSD G 
Sbjct: 208 GPDGVMGSDMDMGYFGFSEPTTNNGLDPMMSGSYMGFDSNEFVQHSPLFGSMPPVSDAGI 267

[Close]

BLAST of Cucsa.300100 vs. TrEMBL
Match: A0A0A0KYM7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G007070 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.9e-34
Identity = 102/227 (44.93%), Postives = 120/227 (52.86%), Query Frame = 1


Query: 11  SYTNESIALQTQKKAPPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTA 70
           S ++ S   +  K+     P +  P RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTA
Sbjct: 10  SPSSSSSKPRKSKQQDGQQPLQQEPTRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTA 69

Query: 71  EDAAIAYDRAARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTP--- 130
           EDAA+AYDRAARS+RGS ARTNF+YSD P         SI  P++  L+    PPTP   
Sbjct: 70  EDAALAYDRAARSMRGSKARTNFVYSDMPHGSS---VTSIISPDESQLY----PPTPTQP 129

Query: 131 ------PSLLHQFP-----PAGDSLSGII----SGDYDASAELPPFPPAISSESVDC--- 190
                 P     FP     P  DS   +     +G  +  AELPP PP  SS   DC   
Sbjct: 130 NHLCFDPFTTSSFPGNDWLPDSDSYQPVTAFMDNGITNDDAELPPLPPDASSSYNDCAAM 189

Query: 191 -DYNNYGVME-------SQNVGFECFDQSSIGIGSCLGFDSSSDYIY 209
            D++             + N  F  F  +S   G   GF SSS Y Y
Sbjct: 190 VDWSTASSSSTSSFMGFNSNAVFPSFPDTSTSDG--FGFGSSSTYFY 227

[Close]

BLAST of Cucsa.300100 vs. TrEMBL
Match: D7M5X8_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_909345 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.5e-33
Identity = 91/202 (45.05%), Postives = 115/202 (56.93%), Query Frame = 1


Query: 37  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSLRGSLARTNFLYS 96
           RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAE+AA+AYDRAARS+RG+ ARTNF+YS
Sbjct: 19  RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYDRAARSMRGTRARTNFVYS 78

Query: 97  DSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSLSGIISGDYDASAELP 156
           D PP        SI  P+ PP      PP PP      PP+ D +  ++  +  +S + P
Sbjct: 79  DMPPSSS---VTSIISPDDPP------PPPPPPA----PPSNDPVDYMMMFNQYSSTDSP 138

Query: 157 PFPPAISSESVDCD-YNNYGVMESQNVGFECFDQSSIG---------IGSCL-------- 216
              P        CD  ++Y    SQ+    C+  +S             SC         
Sbjct: 139 MLQP-------HCDQVDSYMFGGSQSTNSYCYSNNSSNELPPLPSDLSNSCYSQPQWTWS 198

Query: 217 GFDSSSDYIYNPMLGSMPTVSD 221
           G D S++Y+++PM   MP VSD
Sbjct: 199 GDDYSAEYVHSPMFSRMPPVSD 200

[Close]

BLAST of Cucsa.300100 vs. TrEMBL
Match: A0A087G6X4_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G139300 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.5e-33
Identity = 90/195 (46.15%), Postives = 109/195 (55.90%), Query Frame = 1


Query: 32  ESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSLRGSLART 91
           E    RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE+AA+AYDRAARS+RG+ ART
Sbjct: 13  EEAGTRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGTRART 72

Query: 92  NFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSLSGIISGDYDA 151
           NF+YSD PP        SI  P+ PP   P + P PP          D +  ++  +  +
Sbjct: 73  NFVYSDMPPSSS---VTSIVSPDDPPPPPPPVAPAPPPC-----HVDDPVDYMMMFNQYS 132

Query: 152 SAELPPFPPAISSESVDCDYNNYGVMESQNVGFECFDQSSIGIGSCLGFDSS------SD 211
           S +     P  S +     +       S N   E     S    SC G+D S      SD
Sbjct: 133 STDSTMLQPNHSDQLDSYMFGGSNSCYSNNSTSELPPLPSDLSNSCYGYDYSSATYFESD 192

Query: 212 YIYNPMLGSMPTVSD 221
           Y+++PM   MP VSD
Sbjct: 193 YVHSPMFSRMPPVSD 199

[Close]

BLAST of Cucsa.300100 vs. TrEMBL
Match: A0A059AQP3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01576 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.5e-33
Identity = 98/238 (41.18%), Postives = 122/238 (51.26%), Query Frame = 1


Query: 28  PPPAESTPH---RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSL 87
           PP  ES+     RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE+AA+AYDRAARS+
Sbjct: 15  PPAGESSAAGGGRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSM 74

Query: 88  RGSLARTNFLYSDSPPPPP----------------PLYSASIHHPNQPPL-----FLPLL 147
           RGS ARTNF+YSD P                    P+++ S   P+  P      +    
Sbjct: 75  RGSRARTNFVYSDLPAGSSVTSILSPDEAQQQNFSPIFANSAPRPDPAPQLDAGGYAESA 134

Query: 148 PPTPPSLLHQFP--PAGDSLSGIISGDYDASAELPPFPPAISSES----VDCDYNNYGVM 207
             T      Q    P G    G  S  +  + ELPP P  +S  S     D    +YG  
Sbjct: 135 WSTSAYYSQQADAAPYGGGGGGAYSQCHYDNVELPPLPSDMSGYSGYSGSDTSSYSYGDT 194

Query: 208 ESQNVGFECFDQSSI-GIGSCLGFDSSSDYIYNPMLGSMPTVSDVGAGDFESPAGNFY 235
              N   +  D ++  G G   GFDS+ +Y+++P+   MP VSD     F      F+
Sbjct: 195 VPSNCYSDFHDPAAASGNGPSFGFDSTEEYVHSPLFSRMPPVSDSVPDSFNLGGSYFF 252

[Close]

BLAST of Cucsa.300100 vs. TAIR10
Match: AT5G13910.1 (AT5G13910.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-36
Identity = 92/202 (45.54%), Postives = 114/202 (56.44%), Query Frame = 1


Query: 37  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSLRGSLARTNFLYS 96
           RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAE+AA+AYDRAARS+RG+ ARTNF+YS
Sbjct: 19  RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYDRAARSMRGTRARTNFVYS 78

Query: 97  DSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSLSGIISGDYDASAELP 156
           D PP        SI  P+ PP      PP PP      PP+ D +  ++  +  +S + P
Sbjct: 79  DMPPSSS---VTSIVSPDDPP------PPPPPPA----PPSNDPVDYMMMFNQYSSTDSP 138

Query: 157 PFPPAISSESVDCD-YNNYGVMESQNVGFECFDQSSIG---------IGSC--------L 216
              P        CD  ++Y    SQ+    C+   S             SC         
Sbjct: 139 MLQP-------HCDQVDSYMFGGSQSSNSYCYSNDSSNELPPLPSDLSNSCYSQPQWTWT 198

Query: 217 GFDSSSDYIYNPMLGSMPTVSD 221
           G D SS+Y+++PM   MP VSD
Sbjct: 199 GDDYSSEYVHSPMFSRMPPVSD 200

[Close]

BLAST of Cucsa.300100 vs. TAIR10
Match: AT1G28160.1 (AT1G28160.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 118.6 bits (296), Expect = 5.2e-27
Identity = 54/80 (67.50%), Postives = 66/80 (82.50%), Query Frame = 1


Query: 20  QTQKKAPPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDR 79
           Q Q++  P P       +++GVRRRPWGRYAAEIR+P+TKER+WLGTFDTAE+AA+AYDR
Sbjct: 21  QKQQQPQPQPQQHIEEIKYVGVRRRPWGRYAAEIRNPTTKERYWLGTFDTAEEAALAYDR 80

Query: 80  AARSLRGSLARTNFLYSDSP 100
           AARS+RG  ARTNF+YSD P
Sbjct: 81  AARSIRGLTARTNFVYSDMP 100

[Close]

BLAST of Cucsa.300100 vs. TAIR10
Match: AT5G18560.1 (AT5G18560.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-26
Identity = 59/98 (60.20%), Postives = 71/98 (72.45%), Query Frame = 1


Query: 32  ESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSLRGSLART 91
           ++ P RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTA +AA+AYDRAA S+RG+ ART
Sbjct: 49  QAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQART 108

Query: 92  NFLYSDSPP----PPPPLYSASIHHPNQPPLFLPLLPP 126
           NF+Y+ +        P L+S  +   N    FLP   P
Sbjct: 109 NFVYTPTDVHTILTNPNLHSLIVSPYNNNQSFLPNSSP 146

[Close]

BLAST of Cucsa.300100 vs. TAIR10
Match: AT1G12890.1 (AT1G12890.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-23
Identity = 48/62 (77.42%), Postives = 56/62 (90.32%), Query Frame = 1


Query: 37 RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSLRGSLARTNFLYS 96
          ++LGVRRRPWGRYAAEIR+P TKERHWLGTFDTAE+AA AYD AARS+ GSLA TNF Y+
Sbjct: 20 KYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAAFAYDVAARSISGSLATTNFFYT 79

Query: 97 DS 99
          ++
Sbjct: 80 EN 81

[Close]

BLAST of Cucsa.300100 vs. TAIR10
Match: AT1G12980.1 (AT1G12980.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 106.3 bits (264), Expect = 2.7e-23
Identity = 52/79 (65.82%), Postives = 59/79 (74.68%), Query Frame = 1


Query: 31  AESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAARSLRGSLAR 90
           A S+  R+ GVRRRPWGRYAAEIRDP +KER WLGTFDTAE AA AYD AAR+ RG+ AR
Sbjct: 50  AGSSTTRYRGVRRRPWGRYAAEIRDPMSKERRWLGTFDTAEQAACAYDSAARAFRGAKAR 109

Query: 91  TNFLYSDSPPPPPPLYSAS 110
           TNF Y  +   P P +S S
Sbjct: 110 TNFTYPTAVIMPEPRFSFS 128

[Close]

BLAST of Cucsa.300100 vs. NCBI nr
Match: gi|449467369|ref|XP_004151396.1| (PREDICTED: ethylene-responsive transcription factor LEP-like [Cucumis sativus])

HSP 1 Score: 457.2 bits (1175), Expect = 1.8e-125
Identity = 216/220 (98.18%), Postives = 218/220 (99.09%), Query Frame = 1


Query: 22  QKKAPPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAA 81
           ++K  PPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAA
Sbjct: 9   KRKHHPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAA 68

Query: 82  RSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSL 141
           RSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSL
Sbjct: 69  RSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGDSL 128

Query: 142 SGIISGDYDASAELPPFPPAISSESVDCDYNNYGVMESQNVGFECFDQSSIGIGSCLGFD 201
           SGIISGDYDASAELPPFPPAISSESVDCDYNNYGVMESQNVGFECFDQSSIGIGSCLGFD
Sbjct: 129 SGIISGDYDASAELPPFPPAISSESVDCDYNNYGVMESQNVGFECFDQSSIGIGSCLGFD 188

Query: 202 SSSDYIYNPMLGSMPTVSDVGAGDFESPAGNFYLPQSSDY 242
           SSSDYIYNPMLGSMPTVSDVGAGDFESPAGNFYLPQSSDY
Sbjct: 189 SSSDYIYNPMLGSMPTVSDVGAGDFESPAGNFYLPQSSDY 228

[Close]

BLAST of Cucsa.300100 vs. NCBI nr
Match: gi|659074565|ref|XP_008437672.1| (PREDICTED: ethylene-responsive transcription factor LEP [Cucumis melo])

HSP 1 Score: 397.9 bits (1021), Expect = 1.3e-107
Identity = 191/223 (85.65%), Postives = 201/223 (90.13%), Query Frame = 1


Query: 20  QTQKKAPPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDR 79
           Q  K++  P PAE TPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE+AAIAYDR
Sbjct: 6   QNPKESTTPAPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDR 65

Query: 80  AARSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQFPPAGD 139
           AARSLRGSLARTNFLYSDSPPPPPP YSASI HP+QPPLFLPLLPP PP L HQFPPAGD
Sbjct: 66  AARSLRGSLARTNFLYSDSPPPPPPPYSASI-HPSQPPLFLPLLPPPPPPLFHQFPPAGD 125

Query: 140 SLSGIISGDYD-ASAELPPFPPAISSESVDCDYNNYGVMESQNVGFECFDQSSIGIGSCL 199
           S SGII GDYD +SAELPPFPPAISSES +CDYNNYG MESQNVGFECFDQSSIG+GSCL
Sbjct: 126 SPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIGMGSCL 185

Query: 200 GFDSSSDYIYNPMLGSMPTVSDVGAGDFESPAGNFYLPQSSDY 242
           GFDSS DY+YNPMLGSM TVSD G GD +SPA NFYLPQSS+Y
Sbjct: 186 GFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY 227

[Close]

BLAST of Cucsa.300100 vs. NCBI nr
Match: gi|596268947|ref|XP_007225065.1| (hypothetical protein PRUPE_ppa018569mg [Prunus persica])

HSP 1 Score: 166.4 bits (420), Expect = 6.2e-38
Identity = 105/251 (41.83%), Postives = 131/251 (52.19%), Query Frame = 1


Query: 22  QKKAPPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAA 81
           Q + P     +    RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE+AA+AYDRAA
Sbjct: 28  QTQQPQQQQQQQQETRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAA 87

Query: 82  RSLRGSLARTNFLYSDSP--PPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQ------ 141
           RS+RGS ARTNF+YSD P       + S      +    F   L P P +  HQ      
Sbjct: 88  RSMRGSKARTNFVYSDMPHGSSVTSIISPDESQHDMSAFFATPLQPQPQTTNHQQSFFTQ 147

Query: 142 -----FPPAGDSLSGIISGDY-----------------DASAELPPFPPAISSESVDCDY 201
                +P +G S  G  SG Y                  +  ELPP PP +SS      Y
Sbjct: 148 DPFDAYPYSGGSSGGFGSGSYGPVSGGDEPGSGSGSGSQSHTELPPLPPCVSSTC----Y 207

Query: 202 NNYGVMES-QNVGFECFDQSSIG-------IGSCLGFDSSSDYIYNPMLGSMPTVSDVGA 235
              GVM S  ++G+  F + +          GS +GFDS+    ++P+ GSMP VSD G 
Sbjct: 208 GPDGVMGSDMDMGYFGFSEPTTNNGLDPMMSGSYMGFDSNEFVQHSPLFGSMPPVSDAGI 267

[Close]

BLAST of Cucsa.300100 vs. NCBI nr
Match: gi|657995756|ref|XP_008390226.1| (PREDICTED: ethylene-responsive transcription factor LEP-like [Malus domestica])

HSP 1 Score: 164.9 bits (416), Expect = 1.8e-37
Identity = 110/258 (42.64%), Postives = 138/258 (53.49%), Query Frame = 1


Query: 20  QTQKKAPPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDR 79
           Q Q++   P   + T  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE+AA+AYDR
Sbjct: 25  QQQQQTQQPQTQQET--RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDR 84

Query: 80  AARSLRGSLARTNFLYSDSP--PPPPPLYSASIHHPNQPPLFLPLLPPT---------PP 139
           AARS+RGS ARTNF+YSD P       + S      +    F   LP T          P
Sbjct: 85  AARSMRGSKARTNFVYSDMPHGSSVTSIISPDESQRDMSAFFTTPLPQTHSQSQTHTQQP 144

Query: 140 SLLHQFP------PAGDS----------LSGIISGD--YDASA---ELPPFPPAISSESV 199
              HQ P        G S          +SG+++ +  Y + +   ELPP PP +SS + 
Sbjct: 145 IFTHQDPFDAYTVSGGSSTEFGSGSYGPISGVVADESGYQSQSHTHELPPLPPCVSSSTC 204

Query: 200 DCDYNNYGVMESQNV----GFECFDQ-------SSIGIGSCLGFDSSSDYIYNPMLGSMP 235
              Y   G+M S  V    GF  F Q        S+  GS +GFDS+    ++P+ GSMP
Sbjct: 205 ---YEPEGIMSSDGVWNESGFYGFSQPTTNNGLDSLVSGSYVGFDSNEFVQHSPLFGSMP 264

[Close]

BLAST of Cucsa.300100 vs. NCBI nr
Match: gi|645231303|ref|XP_008222331.1| (PREDICTED: ethylene-responsive transcription factor LEP-like [Prunus mume])

HSP 1 Score: 163.3 bits (412), Expect = 5.3e-37
Identity = 106/251 (42.23%), Postives = 132/251 (52.59%), Query Frame = 1


Query: 20  QTQKKAPPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDR 79
           Q Q+   P    +    RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE+AA+AYDR
Sbjct: 25  QNQQTQQPQQQQQQQETRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDR 84

Query: 80  AARSLRGSLARTNFLYSDSP--PPPPPLYSASIHHPNQPPLFLPLLPPTPPSLLHQ---- 139
           AARS+RGS ARTNF+YSD P       + S      +    F   L P P +  HQ    
Sbjct: 85  AARSMRGSKARTNFVYSDMPHGSSVTSIISPDESQRDMSAFFATPLQPQPQTTNHQQSFF 144

Query: 140 -------FPPAGDSLSG----IISGDYDAS-----------AELPPFPPAISSESVDCDY 199
                  +P +G   SG    +  GD   S            ELPP PP +SS      Y
Sbjct: 145 TQDPFDAYPYSGGFGSGSYGPVSGGDEPGSGSGSGSGSQSHTELPPLPPCVSSTC----Y 204

Query: 200 NNYGVMES-QNVGFECFDQSSIG-------IGSCLGFDSSSDYIYNPMLGSMPTVSDVGA 235
              GVM S  ++G+  F + +          GS +GFDS+    ++P+ GSMP VSD G 
Sbjct: 205 GPDGVMGSDMDMGYFGFSEPTTNNGLDPMMNGSYMGFDSNEFVQHSPLFGSMPPVSDAGI 264

The following BLAST results are available for this feature:

BLAST of Cucsa.300100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LEP_ARATH	2.2e-35	45.54	Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2...	[more]
ERF87_ARATH	9.3e-26	67.50	Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana GN=ERF08...	[more]
ERF86_ARATH	2.7e-25	60.20	Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana GN=ERF08...	[more]
ERF88_ARATH	3.7e-22	77.42	Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana GN=ERF08...	[more]
ESR1_ARATH	4.8e-22	65.82	Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana GN=ESR1 PE...	[more]

BLAST of Cucsa.300100 vs. TrEMBL


Match Name	E-value	Identity	Description
M5XK05_PRUPE	4.3e-38	41.83	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018569mg PE=4 SV=1	[more]
A0A0A0KYM7_CUCSA	4.9e-34	44.93	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G007070 PE=4 SV=1	[more]
D7M5X8_ARALL	2.5e-33	45.05	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]
A0A087G6X4_ARAAL	5.5e-33	46.15	Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G139300 PE=4 SV=1	[more]
A0A059AQP3_EUCGR	5.5e-33	41.18	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01576 PE=4 SV=1	[more]

BLAST of Cucsa.300100 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13910.1	1.2e-36	45.54	Integrase-type DNA-binding superfamily protein	[more]
AT1G28160.1	5.2e-27	67.50	Integrase-type DNA-binding superfamily protein	[more]
AT5G18560.1	1.5e-26	60.20	Integrase-type DNA-binding superfamily protein	[more]
AT1G12890.1	2.1e-23	77.42	Integrase-type DNA-binding superfamily protein	[more]
AT1G12980.1	2.7e-23	65.82	Integrase-type DNA-binding superfamily protein	[more]

BLAST of Cucsa.300100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449467369\|ref\|XP_004151396.1\|	1.8e-125	98.18	PREDICTED: ethylene-responsive transcription factor LEP-like [Cucumis sativus]	[more]
gi\|659074565\|ref\|XP_008437672.1\|	1.3e-107	85.65	PREDICTED: ethylene-responsive transcription factor LEP [Cucumis melo]	[more]
gi\|596268947\|ref\|XP_007225065.1\|	6.2e-38	41.83	hypothetical protein PRUPE_ppa018569mg [Prunus persica]	[more]
gi\|657995756\|ref\|XP_008390226.1\|	1.8e-37	42.64	PREDICTED: ethylene-responsive transcription factor LEP-like [Malus domestica]	[more]
gi\|645231303\|ref\|XP_008222331.1\|	5.3e-37	42.23	PREDICTED: ethylene-responsive transcription factor LEP-like [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010432	bract development
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0010451	floral meristem growth
biological_process	GO:0010102	lateral root morphogenesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0044212	transcription regulatory region DNA binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.300100.1	Cucsa.300100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 60..76 score: 6.9E-8coord: 38..49 score: 6.
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 38..94 score: 3.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 40..86 score: 2.9
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 37..100 score: 7.8
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 37..94 score: 20
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 38..95 score: 7.19
None	No IPR available	PANTHER	PTHR31677	FAMILY NOT NAMED	coord: 37..233 score: 6.6
None	No IPR available	PANTHER	PTHR31677:SF5	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP	coord: 37..233 score: 6.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.300100	Cla009063	Watermelon (97103) v1	cgywmB545
Cucsa.300100	CsaUNG003730	Cucumber (Chinese Long) v2	cgycuB426
Cucsa.300100	MELO3C005088	Melon (DHL92) v3.5.1	cgymeB493
Cucsa.300100	ClCG01G007910	Watermelon (Charleston Gray)	cgywcgB517
Cucsa.300100	CSPIUnG00170	Wild cucumber (PI 183967)	cgycpiB450
Cucsa.300100	Lsi09G008380	Bottle gourd (USVL1VR-Ls)	cgylsiB484
Cucsa.300100	MELO3C005088.2	Melon (DHL92) v3.6.1	cgymedB492
Cucsa.300100	CsaV3_5G021950	Cucumber (Chinese Long) v3	cgycucB463
Cucsa.300100	Cla97C01G008260	Watermelon (97103) v2	cgywmbB518

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None