MELO3C004864.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C004864.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionCyclin-dependent kinases regulatory subunit
Locationchr12 : 8532039 .. 8533353 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTTTTATCCCCTCAACTTTCCATATTTCTTCCCTTTCCCAAAATTCAAACCACTATTTAAACTTCATCATCTCATTTCCTTCTTCTTCTTCTTCTTCTTCACCCCTTCTCCAAGGTCTGCCATTCTTCTTCTCTCTTCATTTTTCTTCCAATTTTTGGAATCCATTTCTCTAATTTTGTTCCGTTTTCTTCAGATCAAAAGCCCTAGCGATTTTTCTGTCTCTTGTTCGGTGCAATGGGTCAGATTCAGTACTCTGAGAAGTACTTTGATGATATCTATGAGTACAGGTCTGTGATTTCTCTTCTATTCATTTATTTTCATCGTCAAGGTTTGATTCTCATGGTTCCTTTTTTATATATATATACATATTTGTTGTAGGCATGTGGTGCTTACTCCTGAAGTGGCGAAACTTCTCCCCAAGAATCGCCTTCTTTCTGAAGTAAGTATTTCATTATTCTTCTCAGTAGTCATTATTTCTTGTGTGGAATCTTGTTGTGATAATCGGAAAGAACTAAAATTGGAAGTGGAAGAGATCTCTCTCATAATCATCGGCTGCTTTTACTCTGATTGTGCGATAGAAACTGAATACATATGAGATCTGTGTAATTTGTTTAAGCAATAGATTGATTGTGTGATGATTAATCTTGATTAAATATTTCACGATTCTCTCCTCCATATCATAATTTCTTGTGCGAAATCGTGTTCCGCTAATTGAAAAGAAAACGAACTAAAAATTGAAAAAGATCTCTCGTAATCTGAATACCTTTAAGATCAGGTAATGGAATTTGATGTTGATGATGAACAGAATGAATGGAGAGCAATCGGCGTTCAACAAAGCCGTGGATGGGTTCATTATGCAATTCATCGCCCAGAGCCGCACATAATGTTGTTCAGAAGGCCACTCAACTATCAACAGCAGCAAGAGAATCAAGCACAACAGCAGATTTTGGCCAAGTAATTGGTTTATTATCCTTTTCTTTTTTTTTCTTTTTTCTTTTTTTTTTCTTTTTTTTTTGTTACTTTAGACACACTATAATGAGAAATATCTCACTACAAAACCAAAAAAAGAACAAAAAAAATAATTAAGTGTTTGTGGTTTGTTGTGTAGTGTAGTTCCCTTCTCCAATTTGGAGAAGCTTTGTGGCCCAGTTAGATCTTTGTCAGTCATAATCAATTCCCCACCATTGTTGATGAATTTGTGGTTTTAATTTGCTTTTGTTATAAGCATGGTTCTTATCTTCTCTTCTTCTTGGCTGCCATCTCTTCTAGAAATTACTTCTAAATTTATTTTATTTTTTCTTTCTGAGGTTTAA

mRNA sequence

CATTTTTATCCCCTCAACTTTCCATATTTCTTCCCTTTCCCAAAATTCAAACCACTATTTAAACTTCATCATCTCATTTCCTTCTTCTTCTTCTTCTTCTTCACCCCTTCTCCAAGATCAAAAGCCCTAGCGATTTTTCTGTCTCTTGTTCGGTGCAATGGGTCAGATTCAGTACTCTGAGAAGTACTTTGATGATATCTATGAGTACAGGCATGTGGTGCTTACTCCTGAAGTGGCGAAACTTCTCCCCAAGAATCGCCTTCTTTCTGAAGTAATGGAATTTGATGTTGATGATGAACAGAATGAATGGAGAGCAATCGGCGTTCAACAAAGCCGTGGATGGGTTCATTATGCAATTCATCGCCCAGAGCCGCACATAATGTTGTTCAGAAGGCCACTCAACTATCAACAGCAGCAAGAGAATCAAGCACAACAGCAGATTTTGGCCAATGTAGTTCCCTTCTCCAATTTGGAGAAGCTTTGTGGCCCAGTTTAA

Coding sequence (CDS)

ATGGGTCAGATTCAGTACTCTGAGAAGTACTTTGATGATATCTATGAGTACAGGCATGTGGTGCTTACTCCTGAAGTGGCGAAACTTCTCCCCAAGAATCGCCTTCTTTCTGAAGTAATGGAATTTGATGTTGATGATGAACAGAATGAATGGAGAGCAATCGGCGTTCAACAAAGCCGTGGATGGGTTCATTATGCAATTCATCGCCCAGAGCCGCACATAATGTTGTTCAGAAGGCCACTCAACTATCAACAGCAGCAAGAGAATCAAGCACAACAGCAGATTTTGGCCAATGTAGTTCCCTTCTCCAATTTGGAGAAGCTTTGTGGCCCAGTTTAA

Protein sequence

MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILANVVPFSNLEKLCGPV
Homology
[Close]
BLAST of MELO3C004864.2 vs. NCBI nr
Match: XP_016903011.1 (PREDICTED: cyclin-dependent kinases regulatory subunit 1 isoform X1 [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 4.1e-41
Identity = 88/98 (89.80%), Postives = 88/98 (89.80%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSR 60
          MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSE          NEWRAIGVQQSR
Sbjct: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSE----------NEWRAIGVQQSR 60

Query: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAN 99
          GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAN
Sbjct: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAN 88

[Close]
BLAST of MELO3C004864.2 vs. NCBI nr
Match: XP_011654109.1 (PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Cucumis sativus] >XP_016903015.1 PREDICTED: cyclin-dependent kinases regulatory subunit 1 isoform X2 [Cucumis melo] >KGN64861.1 hypothetical protein Csa_1G132710 [Cucumis sativus])

HSP 1 Score: 174.5 bits (441), Expect = 2.1e-40
Identity = 87/97 (89.69%), Postives = 87/97 (89.69%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSR 60
          MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSE          NEWRAIGVQQSR
Sbjct: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSE----------NEWRAIGVQQSR 60

Query: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA 98
          GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
Sbjct: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA 87

[Close]
BLAST of MELO3C004864.2 vs. NCBI nr
Match: XP_022964884.1 (cyclin-dependent kinases regulatory subunit 1-like [Cucurbita moschata] >XP_022964885.1 cyclin-dependent kinases regulatory subunit 1-like [Cucurbita moschata] >XP_022970358.1 cyclin-dependent kinases regulatory subunit 1-like [Cucurbita maxima] >XP_022970359.1 cyclin-dependent kinases regulatory subunit 1-like [Cucurbita maxima] >XP_023519916.1 cyclin-dependent kinases regulatory subunit 1-like [Cucurbita pepo subsp. pepo] >XP_023519917.1 cyclin-dependent kinases regulatory subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 173.3 bits (438), Expect = 4.6e-40
Identity = 86/97 (88.66%), Postives = 87/97 (89.69%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSR 60
          MGQIQYSEKYFDDIYEYRHVVLTP+VAKLLPKNRLLSE          NEWRAIGVQQSR
Sbjct: 1  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSE----------NEWRAIGVQQSR 60

Query: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA 98
          GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
Sbjct: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA 87

[Close]
BLAST of MELO3C004864.2 vs. NCBI nr
Match: GAV69664.1 (CKS domain-containing protein, partial [Cephalotus follicularis])

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39
Identity = 85/98 (86.73%), Postives = 86/98 (87.76%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSR 60
          MGQIQYSEKYFDD YEYRHVVLTPEVAKLLPKNRLLSE          NEWRAIGVQQSR
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLTPEVAKLLPKNRLLSE----------NEWRAIGVQQSR 60

Query: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAN 99
          GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQ +LAN
Sbjct: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQNMLAN 88

[Close]
BLAST of MELO3C004864.2 vs. NCBI nr
Match: GAV69670.1 (CKS domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 169.5 bits (428), Expect = 6.6e-39
Identity = 84/97 (86.60%), Postives = 85/97 (87.63%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSR 60
          MGQIQYSEKYFDD YEYRHVVLTPEVAKLLPKNRLLSE          NEWRAIGVQQSR
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLTPEVAKLLPKNRLLSE----------NEWRAIGVQQSR 60

Query: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA 98
          GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQ +LA
Sbjct: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQNMLA 87

[Close]
BLAST of MELO3C004864.2 vs. TAIR10
Match: AT2G27960.1 (cyclin-dependent kinase-subunit 1)

HSP 1 Score: 160.6 bits (405), Expect = 5.6e-40
Identity = 78/96 (81.25%), Postives = 82/96 (85.42%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSR 60
          MGQIQYSEKYFDD +EYRHVVL PEVAKLLPKNRLLSE          NEWRAIGVQQSR
Sbjct: 1  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSE----------NEWRAIGVQQSR 60

Query: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQIL 97
          GWVHYA+HRPEPHIMLFRRPLNYQQQQENQAQ  ++
Sbjct: 61 GWVHYAVHRPEPHIMLFRRPLNYQQQQENQAQNMLV 86

[Close]
BLAST of MELO3C004864.2 vs. TAIR10
Match: AT2G27970.1 (CDK-subunit 2)

HSP 1 Score: 146.0 bits (367), Expect = 1.4e-35
Identity = 70/90 (77.78%), Postives = 76/90 (84.44%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSR 60
          MGQIQYS+KYFDD +EYRHVVL PEVAKLLPKNR+LSE          +EWRAIGVQQSR
Sbjct: 1  MGQIQYSDKYFDDTFEYRHVVLPPEVAKLLPKNRILSE----------SEWRAIGVQQSR 60

Query: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQ 91
          GWVHYAIHRPEPHIMLFRRPLNYQQ+ + Q
Sbjct: 61 GWVHYAIHRPEPHIMLFRRPLNYQQEHQAQ 80

[Close]
BLAST of MELO3C004864.2 vs. Swiss-Prot
Match: sp|O23249|CKS1_ARATH (Cyclin-dependent kinases regulatory subunit 1 OS=Arabidopsis thaliana OX=3702 GN=CKS1 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.0e-38
Identity = 78/96 (81.25%), Postives = 82/96 (85.42%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSR 60
          MGQIQYSEKYFDD +EYRHVVL PEVAKLLPKNRLLSE          NEWRAIGVQQSR
Sbjct: 1  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSE----------NEWRAIGVQQSR 60

Query: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQIL 97
          GWVHYA+HRPEPHIMLFRRPLNYQQQQENQAQ  ++
Sbjct: 61 GWVHYAVHRPEPHIMLFRRPLNYQQQQENQAQNMLV 86

[Close]
BLAST of MELO3C004864.2 vs. Swiss-Prot
Match: sp|A2XCH8|CKS1_ORYSI (Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. indica OX=39946 GN=CKS1 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.6e-34
Identity = 71/84 (84.52%), Postives = 72/84 (85.71%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSR 60
          MGQIQYSEKYFDD YEYRHVVL PEVAKLLPKNRLLSE          NEWRAIGVQQSR
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE----------NEWRAIGVQQSR 60

Query: 61 GWVHYAIHRPEPHIMLFRRPLNYQ 85
          GWVHYAIHRPEPHIMLFRRPLN+Q
Sbjct: 61 GWVHYAIHRPEPHIMLFRRPLNFQ 74

[Close]
BLAST of MELO3C004864.2 vs. Swiss-Prot
Match: sp|Q6PS57|CKS1_ORYSJ (Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CKS1 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.6e-34
Identity = 71/84 (84.52%), Postives = 72/84 (85.71%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSR 60
          MGQIQYSEKYFDD YEYRHVVL PEVAKLLPKNRLLSE          NEWRAIGVQQSR
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE----------NEWRAIGVQQSR 60

Query: 61 GWVHYAIHRPEPHIMLFRRPLNYQ 85
          GWVHYAIHRPEPHIMLFRRPLN+Q
Sbjct: 61 GWVHYAIHRPEPHIMLFRRPLNFQ 74

[Close]
BLAST of MELO3C004864.2 vs. Swiss-Prot
Match: sp|Q9SJJ5|CKS2_ARATH (Cyclin-dependent kinases regulatory subunit 2 OS=Arabidopsis thaliana OX=3702 GN=CKS2 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.6e-34
Identity = 70/90 (77.78%), Postives = 76/90 (84.44%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSR 60
          MGQIQYS+KYFDD +EYRHVVL PEVAKLLPKNR+LSE          +EWRAIGVQQSR
Sbjct: 1  MGQIQYSDKYFDDTFEYRHVVLPPEVAKLLPKNRILSE----------SEWRAIGVQQSR 60

Query: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQ 91
          GWVHYAIHRPEPHIMLFRRPLNYQQ+ + Q
Sbjct: 61 GWVHYAIHRPEPHIMLFRRPLNYQQEHQAQ 80

[Close]
BLAST of MELO3C004864.2 vs. Swiss-Prot
Match: sp|P55933|CKS1_PHYPO (Probable cyclin-dependent kinases regulatory subunit OS=Physarum polycephalum OX=5791 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.4e-24
Identity = 52/76 (68.42%), Postives = 61/76 (80.26%), Query Frame = 0 

Query: 4  IQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSRGWV 63
          IQYSEKY+DD +EYRHV+L P+VAK +PKNRLLSE           EWR +GVQQS+GWV
Sbjct: 6  IQYSEKYYDDKFEYRHVILPPDVAKEIPKNRLLSE----------GEWRGLGVQQSQGWV 65

Query: 64 HYAIHRPEPHIMLFRR 80
          HYA+HRPEPHI+LFRR
Sbjct: 66 HYALHRPEPHILLFRR 71

[Close]
BLAST of MELO3C004864.2 vs. TrEMBL
Match: tr|A0A1S4E453|A0A1S4E453_CUCME (Cyclin-dependent kinases regulatory subunit OS=Cucumis melo OX=3656 GN=LOC103500769 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.7e-41
Identity = 88/98 (89.80%), Postives = 88/98 (89.80%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSR 60
          MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSE          NEWRAIGVQQSR
Sbjct: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSE----------NEWRAIGVQQSR 60

Query: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAN 99
          GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAN
Sbjct: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAN 88

[Close]
BLAST of MELO3C004864.2 vs. TrEMBL
Match: tr|A0A1S4E4W6|A0A1S4E4W6_CUCME (Cyclin-dependent kinases regulatory subunit OS=Cucumis melo OX=3656 GN=LOC103500769 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.4e-40
Identity = 87/97 (89.69%), Postives = 87/97 (89.69%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSR 60
          MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSE          NEWRAIGVQQSR
Sbjct: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSE----------NEWRAIGVQQSR 60

Query: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA 98
          GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
Sbjct: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA 87

[Close]
BLAST of MELO3C004864.2 vs. TrEMBL
Match: tr|A0A0A0LY04|A0A0A0LY04_CUCSA (Cyclin-dependent kinases regulatory subunit OS=Cucumis sativus OX=3659 GN=Csa_1G132710 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.4e-40
Identity = 87/97 (89.69%), Postives = 87/97 (89.69%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSR 60
          MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSE          NEWRAIGVQQSR
Sbjct: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSE----------NEWRAIGVQQSR 60

Query: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA 98
          GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
Sbjct: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA 87

[Close]
BLAST of MELO3C004864.2 vs. TrEMBL
Match: tr|A0A1Q3BP64|A0A1Q3BP64_CEPFO (Cyclin-dependent kinases regulatory subunit (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_13165 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 8.8e-40
Identity = 85/98 (86.73%), Postives = 86/98 (87.76%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSR 60
          MGQIQYSEKYFDD YEYRHVVLTPEVAKLLPKNRLLSE          NEWRAIGVQQSR
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLTPEVAKLLPKNRLLSE----------NEWRAIGVQQSR 60

Query: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAN 99
          GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQ +LAN
Sbjct: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQNMLAN 88

[Close]
BLAST of MELO3C004864.2 vs. TrEMBL
Match: tr|A0A1Q3BNS5|A0A1Q3BNS5_CEPFO (Cyclin-dependent kinases regulatory subunit OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_13171 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 4.4e-39
Identity = 84/97 (86.60%), Postives = 85/97 (87.63%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSR 60
          MGQIQYSEKYFDD YEYRHVVLTPEVAKLLPKNRLLSE          NEWRAIGVQQSR
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLTPEVAKLLPKNRLLSE----------NEWRAIGVQQSR 60

Query: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA 98
          GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQ +LA
Sbjct: 61 GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQNMLA 87

The following BLAST results are available for this feature:
BLAST of MELO3C004864.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016903011.14.1e-4189.80PREDICTED: cyclin-dependent kinases regulatory subunit 1 isoform X1 [Cucumis mel... [more]
XP_011654109.12.1e-4089.69PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Cucumis sativus] >XP_0... [more]
XP_022964884.14.6e-4088.66cyclin-dependent kinases regulatory subunit 1-like [Cucurbita moschata] >XP_0229... [more]
GAV69664.11.3e-3986.73CKS domain-containing protein, partial [Cephalotus follicularis][more]
GAV69670.16.6e-3986.60CKS domain-containing protein [Cephalotus follicularis][more]
BLAST of MELO3C004864.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G27960.15.6e-4081.25cyclin-dependent kinase-subunit 1[more]
AT2G27970.11.4e-3577.78CDK-subunit 2[more]
BLAST of MELO3C004864.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O23249|CKS1_ARATH1.0e-3881.25Cyclin-dependent kinases regulatory subunit 1 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|A2XCH8|CKS1_ORYSI2.6e-3484.52Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. indica OX=3... [more]
sp|Q6PS57|CKS1_ORYSJ2.6e-3484.52Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. japonica OX... [more]
sp|Q9SJJ5|CKS2_ARATH2.6e-3477.78Cyclin-dependent kinases regulatory subunit 2 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|P55933|CKS1_PHYPO1.4e-2468.42Probable cyclin-dependent kinases regulatory subunit OS=Physarum polycephalum OX... [more]
BLAST of MELO3C004864.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E453|A0A1S4E453_CUCME2.7e-4189.80Cyclin-dependent kinases regulatory subunit OS=Cucumis melo OX=3656 GN=LOC103500... [more]
tr|A0A1S4E4W6|A0A1S4E4W6_CUCME1.4e-4089.69Cyclin-dependent kinases regulatory subunit OS=Cucumis melo OX=3656 GN=LOC103500... [more]
tr|A0A0A0LY04|A0A0A0LY04_CUCSA1.4e-4089.69Cyclin-dependent kinases regulatory subunit OS=Cucumis sativus OX=3659 GN=Csa_1G... [more]
tr|A0A1Q3BP64|A0A1Q3BP64_CEPFO8.8e-4086.73Cyclin-dependent kinases regulatory subunit (Fragment) OS=Cephalotus folliculari... [more]
tr|A0A1Q3BNS5|A0A1Q3BNS5_CEPFO4.4e-3986.60Cyclin-dependent kinases regulatory subunit OS=Cephalotus follicularis OX=3775 G... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
Vocabulary: Molecular Function
TermDefinition
GO:0016538cyclin-dependent protein serine/threonine kinase regulator activity
Vocabulary: INTERPRO
TermDefinition
IPR036858Cyclin-dep_kinase_reg-sub_sf
IPR000789Cyclin-dep_kinase_reg-sub
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007049 cell cycle
biological_process GO:0051301 cell division
biological_process GO:0045859 regulation of protein kinase activity
biological_process GO:0042023 DNA endoreduplication
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0010440 stomatal lineage progression
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
molecular_function GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity
molecular_function GO:0016301 kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004864.2.1MELO3C004864.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000789Cyclin-dependent kinase, regulatory subunitPRINTSPR00296CYCLINKINASEcoord: 18..32
score: 56.41
coord: 65..79
score: 76.41
coord: 3..17
score: 64.1
coord: 50..64
score: 75.9
IPR000789Cyclin-dependent kinase, regulatory subunitSMARTSM01084CKS_2coord: 3..82
e-value: 8.3E-40
score: 148.2
IPR000789Cyclin-dependent kinase, regulatory subunitPFAMPF01111CKScoord: 4..80
e-value: 1.9E-28
score: 98.4
IPR000789Cyclin-dependent kinase, regulatory subunitPROSITEPS00944CKS_1coord: 6..24
IPR036858Cyclin-dependent kinase, regulatory subunit superfamilyGENE3DG3DSA:3.30.170.10coord: 1..94
e-value: 8.8E-36
score: 124.0
IPR036858Cyclin-dependent kinase, regulatory subunit superfamilySUPERFAMILYSSF55637Cell cycle regulatory proteinscoord: 1..93
NoneNo IPR availablePANTHERPTHR23415CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7coord: 1..92
NoneNo IPR availablePANTHERPTHR23415:SF29CYCLIN-DEPENDENT KINASES REGULATORY SUBUNITcoord: 1..92