MELO3C004864 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C004864
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Cyclin-dependent kinases regulatory subunit
Location	chr12 : 8530043 .. 8530964 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTCTCTTCATTTTTCTTCCAATTTTTGGAATCCATTTCTCTAATTTTGTTCCGTTTTCTTCAGATCAAAAGCCCTAGCGATTTTTCTGTCTCTTGTTCGGTGCAATGGGTCAGATTCAGTACTCTGAGAAGTACTTTGATGATATCTATGAGTACAGGTCTGTGATTTCTCTTCTATTCATTTATTTTCATCGTCAAGGTTTGATTCTCATGGTTCCTTTTTTATATATATATACATATTTGTTGTAGGCATGTGGTGCTTACTCCTGAAGTGGCGAAACTTCTCCCCAAGAATCGCCTTCTTTCTGAAGTAAGTATTTCATTATTCTTCTCAGTAGTCATTATTTCTTGTGTGGAATCTTGTTGTGATAATCGGAAAGAACTAAAATTGGAAGTGGAAGAGATCTCTCTCATAATCATCGGCTGCTTTTACTCTGATTGTGCGATAGAAACTGAATACATATGAGATCTGTGTAATTTGTTTAAGCAATAGATTGATTGTGTGATGATTAATCTTGATTAAATATTTCACGATTCTCTCCTCCATATCATAATTTCTTGTGCGAAATCGTGTTCCGCTAATTGAAAAGAAAACGAACTAAAAATTGAAAAAGATCTCTCGTAATCTGAATACCTTTAAGATCAGGTAATGGAATTTGATGTTGATGATGAACAGAATGAATGGAGAGCAATCGGCGTTCAACAAAGCCGTGGATGGGTTCATTATGCAATTCATCGCCCAGAGCCGCACATAATGTTGTTCAGAAGGCCACTCAACTATCAACAGCAGCAAGAGAATCAAGCACAACAGCAGATTTTGGCCAAGTAATTGGTTTATTATCCTTTTCTTTTTTTCTTTTTTCTTTTTTTTCTTTTT

mRNA sequence

CTTCTCTCTTCATTTTTCTTCCAATTTTTGGAATCCATTTCTCTAATTTTGTTCCGTTTTCTTCAGATCAAAAGCCCTAGCGATTTTTCTGTCTCTTGTTCGGTGCAATGGGTCAGATTCAGTACTCTGAGAAGTACTTTGATGATATCTATGAGTACAGGCATGTGGTGCTTACTCCTGAAGTGGCGAAACTTCTCCCCAAGAATCGCCTTCTTTCTGAAAATGAATGGAGAGCAATCGGCGTTCAACAAAGCCGTGGATGGGTTCATTATGCAATTCATCGCCCAGAGCCGCACATAATGTTGTTCAGAAGGCCACTCAACTATCAACAGCAGCAAGAGAATCAAGCACAACAGCAGATTTTGGCCAAGTAATTGGTTTATTATCCTTTTCTTTTTTTCTTTTTTCTTTTTTTTCTTTTT

Coding sequence (CDS)

ATGGGTCAGATTCAGTACTCTGAGAAGTACTTTGATGATATCTATGAGTACAGGCATGTGGTGCTTACTCCTGAAGTGGCGAAACTTCTCCCCAAGAATCGCCTTCTTTCTGAAAATGAATGGAGAGCAATCGGCGTTCAACAAAGCCGTGGATGGGTTCATTATGCAATTCATCGCCCAGAGCCGCACATAATGTTGTTCAGAAGGCCACTCAACTATCAACAGCAGCAAGAGAATCAAGCACAACAGCAGATTTTGGCCAAGTAA

Homology

[Close]

BLAST of MELO3C004864 vs. Swiss-Prot
Match: CKS1_ARATH (Cyclin-dependent kinases regulatory subunit 1 OS=Arabidopsis thaliana GN=CKS1 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 9.9e-42
Identity = 78/86 (90.70%), Postives = 80/86 (93.02%), Query Frame = 1


Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDD +EYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRP
Sbjct: 1  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAVHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQQIL 87
          EPHIMLFRRPLNYQQQQENQAQ  ++
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQNMLV 86

[Close]

BLAST of MELO3C004864 vs. Swiss-Prot
Match: CKS1_ORYSI (Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. indica GN=CKS1 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 2.7e-39
Identity = 76/81 (93.83%), Postives = 75/81 (92.59%), Query Frame = 1


Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDD YEYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQA 82
          EPHIMLFRRPLN+QQQQE  A
Sbjct: 61 EPHIMLFRRPLNFQQQQEAAA 81

[Close]

BLAST of MELO3C004864 vs. Swiss-Prot
Match: CKS1_ORYSJ (Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. japonica GN=CKS1 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 2.7e-39
Identity = 76/81 (93.83%), Postives = 75/81 (92.59%), Query Frame = 1


Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDD YEYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQA 82
          EPHIMLFRRPLN+QQQQE  A
Sbjct: 61 EPHIMLFRRPLNFQQQQEAAA 81

[Close]

BLAST of MELO3C004864 vs. Swiss-Prot
Match: CKS2_ARATH (Cyclin-dependent kinases regulatory subunit 2 OS=Arabidopsis thaliana GN=CKS2 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.3e-37
Identity = 70/80 (87.50%), Postives = 74/80 (92.50%), Query Frame = 1


Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYS+KYFDD +EYRHVVL PEVAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSDKYFDDTFEYRHVVLPPEVAKLLPKNRILSESEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQ 81
          EPHIMLFRRPLNYQQ+ + Q
Sbjct: 61 EPHIMLFRRPLNYQQEHQAQ 80

[Close]

BLAST of MELO3C004864 vs. Swiss-Prot
Match: CKS1_PHYPO (Probable cyclin-dependent kinases regulatory subunit OS=Physarum polycephalum PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 4.0e-27
Identity = 52/66 (78.79%), Postives = 59/66 (89.39%), Query Frame = 1


Query: 4  IQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPH 63
          IQYSEKY+DD +EYRHV+L P+VAK +PKNRLLSE EWR +GVQQS+GWVHYA+HRPEPH
Sbjct: 6  IQYSEKYYDDKFEYRHVILPPDVAKEIPKNRLLSEGEWRGLGVQQSQGWVHYALHRPEPH 65

Query: 64 IMLFRR 70
          I+LFRR
Sbjct: 66 ILLFRR 71

[Close]

BLAST of MELO3C004864 vs. TrEMBL
Match: A0A0A0LY04_CUCSA (Cyclin-dependent kinases regulatory subunit OS=Cucumis sativus GN=Csa_1G132710 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 2.5e-44
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1


Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQQILAK 89
          EPHIMLFRRPLNYQQQQENQAQQQILAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQQILAK 88

[Close]

BLAST of MELO3C004864 vs. TrEMBL
Match: B9SCL8_RICCO (Cyclin-dependent kinases regulatory subunit OS=Ricinus communis GN=RCOM_0475440 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.0e-42
Identity = 84/88 (95.45%), Postives = 85/88 (96.59%), Query Frame = 1


Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKY+DD YEYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYYDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQQILAK 89
          EPHIMLFRRPLNYQQQQENQAQQ ILAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQNILAK 88

[Close]

BLAST of MELO3C004864 vs. TrEMBL
Match: A0A0D2UD86_GOSRA (Cyclin-dependent kinases regulatory subunit OS=Gossypium raimondii GN=B456_009G089700 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.0e-42
Identity = 84/88 (95.45%), Postives = 85/88 (96.59%), Query Frame = 1


Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDD YEYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQQILAK 89
          EPHIMLFRRPLNYQQQQENQAQQ +LAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQSMLAK 88

[Close]

BLAST of MELO3C004864 vs. TrEMBL
Match: A0A061GWB0_THECC (Cyclin-dependent kinases regulatory subunit OS=Theobroma cacao GN=TCM_041571 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 5.3e-42
Identity = 84/88 (95.45%), Postives = 85/88 (96.59%), Query Frame = 1


Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDD YEYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQQILAK 89
          EPHIMLFRRPLNYQQQQENQAQQ +LAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQAMLAK 88

[Close]

BLAST of MELO3C004864 vs. TrEMBL
Match: A0A0B0ML77_GOSAR (Cyclin-dependent kinases regulatory subunit OS=Gossypium arboreum GN=F383_01496 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 9.0e-42
Identity = 83/88 (94.32%), Postives = 85/88 (96.59%), Query Frame = 1


Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDD YEYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQQILAK 89
          EPHIMLFRRPLNYQQQQENQAQQ +L+K
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQSMLSK 88

[Close]

BLAST of MELO3C004864 vs. TAIR10
Match: AT2G27960.1 (AT2G27960.1 cyclin-dependent kinase-subunit 1)

HSP 1 Score: 170.2 bits (430), Expect = 5.6e-43
Identity = 78/86 (90.70%), Postives = 80/86 (93.02%), Query Frame = 1


Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDD +EYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRP
Sbjct: 1  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAVHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQQIL 87
          EPHIMLFRRPLNYQQQQENQAQ  ++
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQNMLV 86

[Close]

BLAST of MELO3C004864 vs. TAIR10
Match: AT2G27970.1 (AT2G27970.1 CDK-subunit 2)

HSP 1 Score: 154.8 bits (390), Expect = 2.4e-38
Identity = 70/80 (87.50%), Postives = 74/80 (92.50%), Query Frame = 1


Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYS+KYFDD +EYRHVVL PEVAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSDKYFDDTFEYRHVVLPPEVAKLLPKNRILSESEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQ 81
          EPHIMLFRRPLNYQQ+ + Q
Sbjct: 61 EPHIMLFRRPLNYQQEHQAQ 80

[Close]

BLAST of MELO3C004864 vs. NCBI nr
Match: gi|659071885|ref|XP_008462400.1| (PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Cucumis melo])

HSP 1 Score: 185.7 bits (470), Expect = 3.6e-44
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1


Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQQILAK 89
          EPHIMLFRRPLNYQQQQENQAQQQILAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQQILAK 88

[Close]

BLAST of MELO3C004864 vs. NCBI nr
Match: gi|720036280|ref|XP_010267302.1| (PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Nelumbo nucifera])

HSP 1 Score: 180.3 bits (456), Expect = 1.5e-42
Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 1


Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDD YEYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQQILAK 89
          EPHIMLFRRPLNYQQQQENQAQQQ+LAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQQMLAK 88

[Close]

BLAST of MELO3C004864 vs. NCBI nr
Match: gi|255565493|ref|XP_002523737.1| (PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Ricinus communis])

HSP 1 Score: 178.3 bits (451), Expect = 5.8e-42
Identity = 84/88 (95.45%), Postives = 85/88 (96.59%), Query Frame = 1


Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKY+DD YEYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYYDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQQILAK 89
          EPHIMLFRRPLNYQQQQENQAQQ ILAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQNILAK 88

[Close]

BLAST of MELO3C004864 vs. NCBI nr
Match: gi|823223912|ref|XP_012444712.1| (PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Gossypium raimondii])

HSP 1 Score: 178.3 bits (451), Expect = 5.8e-42
Identity = 84/88 (95.45%), Postives = 85/88 (96.59%), Query Frame = 1


Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDD YEYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQQILAK 89
          EPHIMLFRRPLNYQQQQENQAQQ +LAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQSMLAK 88

[Close]

BLAST of MELO3C004864 vs. NCBI nr
Match: gi|590587770|ref|XP_007016049.1| (Cyclin-dependent kinases regulatory subunit 1 [Theobroma cacao])

HSP 1 Score: 177.9 bits (450), Expect = 7.6e-42
Identity = 84/88 (95.45%), Postives = 85/88 (96.59%), Query Frame = 1


Query: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDD YEYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQQILAK 89
          EPHIMLFRRPLNYQQQQENQAQQ +LAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQAMLAK 88

The following BLAST results are available for this feature:

BLAST of MELO3C004864 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CKS1_ARATH	9.9e-42	90.70	Cyclin-dependent kinases regulatory subunit 1 OS=Arabidopsis thaliana GN=CKS1 PE...	[more]
CKS1_ORYSI	2.7e-39	93.83	Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. indica GN=C...	[more]
CKS1_ORYSJ	2.7e-39	93.83	Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. japonica GN...	[more]
CKS2_ARATH	4.3e-37	87.50	Cyclin-dependent kinases regulatory subunit 2 OS=Arabidopsis thaliana GN=CKS2 PE...	[more]
CKS1_PHYPO	4.0e-27	78.79	Probable cyclin-dependent kinases regulatory subunit OS=Physarum polycephalum PE...	[more]

BLAST of MELO3C004864 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY04_CUCSA	2.5e-44	100.00	Cyclin-dependent kinases regulatory subunit OS=Cucumis sativus GN=Csa_1G132710 P...	[more]
B9SCL8_RICCO	4.0e-42	95.45	Cyclin-dependent kinases regulatory subunit OS=Ricinus communis GN=RCOM_0475440 ...	[more]
A0A0D2UD86_GOSRA	4.0e-42	95.45	Cyclin-dependent kinases regulatory subunit OS=Gossypium raimondii GN=B456_009G0...	[more]
A0A061GWB0_THECC	5.3e-42	95.45	Cyclin-dependent kinases regulatory subunit OS=Theobroma cacao GN=TCM_041571 PE=...	[more]
A0A0B0ML77_GOSAR	9.0e-42	94.32	Cyclin-dependent kinases regulatory subunit OS=Gossypium arboreum GN=F383_01496 ...	[more]

BLAST of MELO3C004864 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27960.1	5.6e-43	90.70	cyclin-dependent kinase-subunit 1	[more]
AT2G27970.1	2.4e-38	87.50	CDK-subunit 2	[more]

BLAST of MELO3C004864 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659071885\|ref\|XP_008462400.1\|	3.6e-44	100.00	PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Cucumis melo]	[more]
gi\|720036280\|ref\|XP_010267302.1\|	1.5e-42	96.59	PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Nelumbo nucifera]	[more]
gi\|255565493\|ref\|XP_002523737.1\|	5.8e-42	95.45	PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Ricinus communis]	[more]
gi\|823223912\|ref\|XP_012444712.1\|	5.8e-42	95.45	PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Gossypium raimondii]	[more]
gi\|590587770\|ref\|XP_007016049.1\|	7.6e-42	95.45	Cyclin-dependent kinases regulatory subunit 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000789	Cyclin-dep_kinase_reg-sub

Vocabulary: **Biological Process**
Term	Definition
GO:0007049	cell cycle

Vocabulary: **Molecular Function**
Term	Definition
GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0042023	DNA endoreduplication
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0045736	negative regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0051726	regulation of cell cycle
biological_process	GO:0010440	stomatal lineage progression
biological_process	GO:0007049	cell cycle
biological_process	GO:0045859	regulation of protein kinase activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C004864T2	MELO3C004864T2	mRNA
MELO3C004864T1	MELO3C004864T1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C004864	Csa1G132710	Cucumber (Chinese Long) v2	cumeB015
MELO3C004864	Cla001856	Watermelon (97103) v1	mewmB169
MELO3C004864	ClCG01G013880	Watermelon (Charleston Gray)	mewcgB131
MELO3C004864	Cla97C01G012860	Watermelon (97103) v2	mewmbB134
MELO3C004864	Bhi08G000124	Wax gourd	mewgoB174
MELO3C004864	CSPI01G13980	Wild cucumber (PI 183967)	cpimeB011
MELO3C004864	Cucsa.200360	Cucumber (Gy14) v1	cgymeB365
MELO3C004864	CmaCh13G002630	Cucurbita maxima (Rimu)	cmameB194
MELO3C004864	CmoCh13G002700	Cucurbita moschata (Rifu)	cmomeB181
MELO3C004864	Cp4.1LG20g07420	Cucurbita pepo (Zucchini)	cpemeB480
MELO3C004864	CsGy1G013980	Cucumber (Gy14) v2	cgybmeB010
MELO3C004864	Carg23701	Silver-seed gourd	carmeB0171
MELO3C004864	CsaV3_1G014150	Cucumber (Chinese Long) v3	cucmeB010

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C004864	Cucurbita maxima (Rimu)	cmameB148
MELO3C004864	Cucurbita moschata (Rifu)	cmomeB138
MELO3C004864	Cucurbita pepo (Zucchini)	cpemeB744
MELO3C004864	Bottle gourd (USVL1VR-Ls)	lsimeB244