MELO3C002120 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C002120
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Pre-mRNA-splicing factor SPF27 like
Location	chr12 : 25024671 .. 25028524 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGAGAGAAATCCCAACAAAATTCGACGCGGGCGGCCGCGGAGTCTTCTTCGTCTTCTCGCGCTCTGAGCTTAGTAAATCCGAAACTCAAAACCTCTATTGTTCGTCGTGGTGACAATGGCGGCTAACAACAATAATGGGGATATCCTAATGCTCGAAGCTCCACCGCAGCCATCTCAACCAGCTTGGCGCGTTTCTGCAGATGCGGAGGTTATCGACGCTTTGCCCTACATTGACGACGACTATGCCGACCCAAGGGTCAAAGCAGAGGTCGATCGCTTGGTCGAGGAAGAGATGCGGCGTAGCTCCAAACGACCCGCCGACTTTCTCAAAGACTTGCCTCCTCTTCCTAAGTTAAAATTCGAGGTAATTTCACTTGCAATTTCCTTTTCCGTCGGAGTTTCCTCTAGGTTATGCTCTTTCTGTTTGATTTCATAGGCTACTGTGCCTGAAAGAACTTACTTCTTTTCCGCTGGATATATTTGCTAGACAGTTACTAATTGATGAGTTTTGAAGCTTTTAGAAGCTCCATCTGCTGTTTTTGCTAGACAGTTACTAATTGACAAGAACATAGATATTGGCATATTGCTTGTCCGAAAGTCACCGTGTGTCATCCAATAATTATGGGACGCCACTCTACATTAGTTCTTTAACCATTACGTTTGATTGATCGTGAGAATATTTCAAAATGTGATAATACTAGCGACAATCTATTCAACTGAACGATGTTTGAACTCAGGATCATCCGATGCTTGCTAGAGAGTATGAGCGTGTAAGAGCTGGGAGGCCTCCAGTCCCTCTTGATGTTGCAAGATATAAATTAGAGACACCACCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTGCTCCGTCATCAAGTGCTGAGGTGAAGTGTTGATACATTTTGATTGTTCTATTATAGGCATTTAAGATTTTTCTTTTGCCCAACTTAATTTTATGGAGATCACAGATCAGTAGAGTTGACTACTTGAACGCATACAGCTCTTCTAATATCTGCAATCCCGAGTCAATATTTTCACGGGTTTTCTTAAGTTGTTAAGTTTGATTTATATTTGGCCCAAAACTCCGTTGAGATAGCCAGCTCCAAGTACTTTATGTTACCTGAACGTGGAAATCACTTTGCTGCACGTAACTCTTTCCCGTTCATCATATTTGTATCCATTTTCTTGGTTGCAGCTGGTTTCTTATATCTAGTTTGTGTACCTTTGGTCATGCTTATGAGAGGTGTGATGTGATTTACACAGTTTTGGTAAGAAAAAGCAAAATACTGAAGATTATGCGTCCAAACCCTGAAAAGAAACATTAGAGAGGTCTTGATGATTCATTAGGAAATAATAAGGAACCTAACCACTGGCGGTCCATCTGTGTCATACTGTAGGCTGGAAAATTTGGATCTGATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAACTGGAAGCACTTCTATCAAGGTTTGTTATAATATATATACTTTTTATGTTATATTTTAATCGAACTACTAATTATGTTTTTATTTTATCACATATGGTTCCTAATCAATCCTTTGCTTTCTAACTTCCAATAGAGTAAATTGTTCCATTACTTGCAAGAAAAAAGAATTTCAAATGGAGAAATAGTTGTTTTACATCATATGTTTGTGCATCTCTCTTTCTTTAATGTACTGCTAGTTGGTTTTTTTTTTATTTTTAATTTTCATTAATCATTATTATTTGTTTTTATAATTAGTACCCAAACTTCTATCAAGAAAATTGAAAGAACACAAGGACATAAAAGAAAAAGAAGAAACTCACAAATGAAGAGACAATCTAAGAAAGGGCCTCAAATCAAGCAAAACATAACCTAACAAGTAGTTACAAAACGACTTTGCCATCAATGAAGGTATACCATATATGATTCTCTGTCTGAACTGAATTCACTCATTAATGAAGGTATACAGTATCTTGTCTCCAATACTCAGCAGACATGAACCATCCACGTAAAGTTGGTCCTGCCTATGGCTCTTTCTTTCTGCATTTATGTTTGCAGAGTAGGGTTCAAATTTGAGAAGGGTTAGCACTTCACATCATTTAAGGACGTAAAGCCTGGTGATTTGGTACTTGGAAAAACATATTTTACAATTTGATGCATTGTTGACAATTCTTTGGTGGTTTCTAGTTTTCTTTATAGTCGTGTCAACGAACGTATGTACATACAGATTGGGATAGGTGCTTATCTAGGGCGGTTTCATAGGTTTACTTACAGACTATGAATCAATCCTCTTAAATGTATAAAACGGGATACACAAGAACTTAATGTTTGGGATCTTCATGGTCTAATAACAATACGATTCTGTGTTCGAATATTATCTACTGTAGATTCCGACATTCACTTGCTTATAAGATTCCGTGTTTGAATATTATCCATGGTAGATTCCAACATTCACTTGTATGGGCATGTTATCTGAGGCAAGGACTGTTGCTATGAAAACTGAAAACTATTGCATCACAGGCATTAGTTTTGTGGTACACTTGGCCACATTTTATCTGTCATTTCTGAGTGAAATGAACATGAAAGTACCAAGTACATCTGTTATCTGACCAAAAATGACCATATATAATTGTTACTTATATTGCCATGATGTTGATTGTTATCAGAATGCAAAAATTAGCTCAGGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAAGTAAGTAGCATCCCTGTAATTCATGTCAATTCTTTGAAATCTTTGGTTGATTATTTATGCAATGCCCAGCAAAACGCTGCATATGAGCTTCATGCTCTGTCCACGCAATGGAAGGAGCTTTGTGAGAAAAATATGGAAATCCAAGTGGCATGCTTTCAATTAGAGGGTCAAATCCAGGAATTAAGGAGAGAAGCAGCAGAAAAGTAATATTACCTTTTCAATTTGATCTATTTTTATTACTCGTGTGTTTGTCATATTTACAACTGAGCTGAGGGTAACGATTCAGGGGCTGGAATTTGGAAGTCAATGTAGAAAATGGTTCTGTTTCCCTTCCAGTATCATAAGGTACGCTTTAGATGTCGTCTCTTGTTCTTAATATCCGACGTTTAACCCAAAGTTCACGTCCATTTCACCTCCGTATATTAGAATTTCTAACTTAACTCTATTTGTACAATATTCTCCTTTCTATTGTTAATTTCCAATATCTCGTATTAAATGAGACATCTGTCATGTGTTACCGTACCCCTCTTCACATTAGTTCAGCAATCTCAGGGCATAAATTAGGACTAATTCTACTCTACCATTAATGTACTCGCATGTTTCCTCTTCCAACATATGAGATAATGCTATAATTCAATCTATATTTATCAAGTTCGTAAAGGAGAAAGCTAAGTTTAGTGATGGTGGAAAATTTATCCTTTTCAGTATTATATCATGTTAATTATACTGGTATATTATAACATGTTTTTTTGTCATCTCAATGGAAAAGGGGAGCGTCTTAACCATGGTTTTTGCTACTCAAAAGTAAAGACTCCCAACGTCTTTTGTTGCCGTTATGATATGCCTACATGGAAGATGAGTTAGATTTCTGCTTATTATAAGAGGTTGGTTGCTTTTCTTGGCCTCCAAAGTTCGTGTCATTTTCAAATTTTATATTGAATTGATTTGTATCTGTACCTTTAGTGAAGTAATTTGAAAACACCTACTTCTGCTAACCGTGTTACTTGGTTACTCTTCGACTTGAATATAGATTATTGTGTAAAAATTATTTAACCCAGACTATCTATCAAATGGTTAATATTTGACTAA

mRNA sequence

GAAAGAGAGAAATCCCAACAAAATTCGACGCGGGCGGCCGCGGAGTCTTCTTCGTCTTCTCGCGCTCTGAGCTTAGTAAATCCGAAACTCAAAACCTCTATTGTTCGTCGTGGTGACAATGGCGGCTAACAACAATAATGGGGATATCCTAATGCTCGAAGCTCCACCGCAGCCATCTCAACCAGCTTGGCGCGTTTCTGCAGATGCGGAGGTTATCGACGCTTTGCCCTACATTGACGACGACTATGCCGACCCAAGGGTCAAAGCAGAGGTCGATCGCTTGGTCGAGGAAGAGATGCGGCGTAGCTCCAAACGACCCGCCGACTTTCTCAAAGACTTGCCTCCTCTTCCTAAGTTAAAATTCGAGGATCATCCGATGCTTGCTAGAGAGTATGAGCGTGTAAGAGCTGGGAGGCCTCCAGTCCCTCTTGATGTTGCAAGATATAAATTAGAGACACCACCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTGCTCCGTCATCAAGTGCTGAGGCTGGAAAATTTGGATCTGATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAACTGGAAGCACTTCTATCAAGAATGCAAAAATTAGCTCAGGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAACAAAACGCTGCATATGAGCTTCATGCTCTGTCCACGCAATGGAAGGAGCTTTGTGAGAAAAATATGGAAATCCAAGTGGCATGCTTTCAATTAGAGGGTCAAATCCAGGAATTAAGGAGAGAAGCAGCAGAAAAGGGCTGGAATTTGGAAGTCAATGTAGAAAATGGTTCTGTTTCCCTTCCAGTATCATAAGGGGAGCGTCTTAACCATGGTTTTTGCTACTCAAAAGTAAAGACTCCCAACGTCTTTTGTTGCCGTTATGATATGCCTACATGGAAGATGAGTTAGATTTCTGCTTATTATAAGAGGTTGGTTGCTTTTCTTGGCCTCCAAAGTTCGTGTCATTTTCAAATTTTATATTGAATTGATTTGTATCTGTACCTTTAGTGAAGTAATTTGAAAACACCTACTTCTGCTAACCGTGTTACTTGGTTACTCTTCGACTTGAATATAGATTATTGTGTAAAAATTATTTAACCCAGACTATCTATCAAATGGTTAATATTTGACTAA

Coding sequence (CDS)

ATGGCGGCTAACAACAATAATGGGGATATCCTAATGCTCGAAGCTCCACCGCAGCCATCTCAACCAGCTTGGCGCGTTTCTGCAGATGCGGAGGTTATCGACGCTTTGCCCTACATTGACGACGACTATGCCGACCCAAGGGTCAAAGCAGAGGTCGATCGCTTGGTCGAGGAAGAGATGCGGCGTAGCTCCAAACGACCCGCCGACTTTCTCAAAGACTTGCCTCCTCTTCCTAAGTTAAAATTCGAGGATCATCCGATGCTTGCTAGAGAGTATGAGCGTGTAAGAGCTGGGAGGCCTCCAGTCCCTCTTGATGTTGCAAGATATAAATTAGAGACACCACCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTGCTCCGTCATCAAGTGCTGAGGCTGGAAAATTTGGATCTGATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAACTGGAAGCACTTCTATCAAGAATGCAAAAATTAGCTCAGGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAACAAAACGCTGCATATGAGCTTCATGCTCTGTCCACGCAATGGAAGGAGCTTTGTGAGAAAAATATGGAAATCCAAGTGGCATGCTTTCAATTAGAGGGTCAAATCCAGGAATTAAGGAGAGAAGCAGCAGAAAAGGGCTGGAATTTGGAAGTCAATGTAGAAAATGGTTCTGTTTCCCTTCCAGTATCATAA

Protein sequence

MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWNLEVNVENGSVSLPVS*

Homology

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BLAST of MELO3C002120 vs. Swiss-Prot
Match: SPF27_ARATH (Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana GN=MOS4 PE=1 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.6e-92
Identity = 162/244 (66.39%), Postives = 202/244 (82.79%), Query Frame = 1


Query: 6   NNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSK 65
           NNGD+LMLEA P+ ++P W  +A+AEVIDALPYIDDDY +P +K+EVDRLVEEEMRRSSK
Sbjct: 4   NNGDVLMLEATPEAARP-WASAANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEMRRSSK 63

Query: 66  RPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDV-ARYKLETPPPNKKNDETA 125
           +PADFLKDLPPLPK  F++ P+L +EYERVRAG+PPV +D  +RYKLE PP NK+ND+ A
Sbjct: 64  KPADFLKDLPPLPKFDFKNCPVLGKEYERVRAGKPPVRIDFESRYKLEMPPANKRNDDAA 123

Query: 126 WKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEK 185
           WKQ LQK Q  L+ +++ LENL+LMSK GP++W+Q+N +LE  L+RMQ+LAQEQNE+IEK
Sbjct: 124 WKQYLQKNQRSLQQKLIELENLELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQNEEIEK 183

Query: 186 VNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWNLEV 245
           VNRERK+HQQ  +YEL+ALS +W++LC KNMEIQ AC  LE QI   ++EAAE+GWNLE 
Sbjct: 184 VNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKKEAAERGWNLEE 243

Query: 246 NVEN 249
            +EN
Sbjct: 244 KLEN 246

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BLAST of MELO3C002120 vs. Swiss-Prot
Match: SPF27_XENTR (Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis GN=bcas2 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.0e-30
Identity = 73/212 (34.43%), Postives = 113/212 (53.30%), Query Frame = 1


Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKLKFEDHPMLARE 91
           V+DALPY D  Y    V+     LVEEE RR   RP        P P     +  ++  E
Sbjct: 12  VVDALPYFDQGYDAQGVREAAAALVEEETRRY--RPTKNYLSYLPTPDYSAFETEIMRNE 71

Query: 92  YERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLDLMSK 151
           +ER+ + +P   L + RY+L  P   ++ND TAW++ +  +   L HQ +R+ENL+LMS+
Sbjct: 72  FERLSSRQPLELLSMKRYELPAPLSGQRNDITAWQECVNNSMAQLEHQAVRIENLELMSQ 131

Query: 152 YGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELC 211
           +G + WK +N+ L  ++   QK  Q+  +KI+ +N +RK  Q  A   L  + + W  L 
Sbjct: 132 HGCNAWKVYNENLLHMIDCAQKDLQKLRKKIQDLNWQRKNSQLTAGARLREMESTWVSLV 191

Query: 212 EKNMEIQVACFQLEGQIQELRREAAEKGWNLE 244
            KN EI+ A  Q+E ++ +L+  + E   N+E
Sbjct: 192 SKNYEIERAIVQMENEVYQLKERSGENKENIE 221

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BLAST of MELO3C002120 vs. Swiss-Prot
Match: SPF27_MOUSE (Pre-mRNA-splicing factor SPF27 OS=Mus musculus GN=Bcas2 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.1e-30
Identity = 72/206 (34.95%), Postives = 110/206 (53.40%), Query Frame = 1


Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKLKFEDHPMLARE 91
           V+DALPY D  Y  P V+     LVEEE RR   RP          P     +  ++  E
Sbjct: 12  VVDALPYFDQGYEAPGVREAAAALVEEETRRY--RPTKNYLSYLTAPDYSAFETDIMRNE 71

Query: 92  YERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLDLMSK 151
           +ER+ A +P   L + RY+L  P   +KND TAW++ +  +   L HQ +R+ENL+LMS+
Sbjct: 72  FERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQ 131

Query: 152 YGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELC 211
           +G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L 
Sbjct: 132 HGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWVSLV 191

Query: 212 EKNMEIQVACFQLEGQIQELRREAAE 238
            KN EI+    QLE +I +++++  E
Sbjct: 192 SKNYEIERTIVQLENEIYQIKQQHGE 215

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BLAST of MELO3C002120 vs. Swiss-Prot
Match: SPF27_HUMAN (Pre-mRNA-splicing factor SPF27 OS=Homo sapiens GN=BCAS2 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.1e-30
Identity = 72/206 (34.95%), Postives = 110/206 (53.40%), Query Frame = 1


Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKLKFEDHPMLARE 91
           V+DALPY D  Y  P V+     LVEEE RR   RP          P     +  ++  E
Sbjct: 12  VVDALPYFDQGYEAPGVREAAAALVEEETRRY--RPTKNYLSYLTAPDYSAFETDIMRNE 71

Query: 92  YERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLDLMSK 151
           +ER+ A +P   L + RY+L  P   +KND TAW++ +  +   L HQ +R+ENL+LMS+
Sbjct: 72  FERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQ 131

Query: 152 YGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELC 211
           +G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L 
Sbjct: 132 HGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWVSLV 191

Query: 212 EKNMEIQVACFQLEGQIQELRREAAE 238
            KN EI+    QLE +I +++++  E
Sbjct: 192 SKNYEIERTIVQLENEIYQIKQQHGE 215

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BLAST of MELO3C002120 vs. Swiss-Prot
Match: SPF27_PONAB (Pre-mRNA-splicing factor SPF27 OS=Pongo abelii GN=BCAS2 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.1e-30
Identity = 74/207 (35.75%), Postives = 111/207 (53.62%), Query Frame = 1


Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKLKFEDHPMLARE 91
           V+DALPY D  Y  P V+     LVEEE RR   RP          P     +  ++  E
Sbjct: 12  VVDALPYFDQGYEAPGVREAAAALVEEETRRY--RPTKNYLSYLTAPDYSAFETDIMRNE 71

Query: 92  YERVRAGRPPVPLDVARYKLETPPPN-KKNDETAWKQTLQKAQCLLRHQVLRLENLDLMS 151
           +ER+ A +P   L + RY+L  PP   KKND TAW++ +  +   L HQ +R+ENL+LMS
Sbjct: 72  FERLAARQPIELLSMKRYELPAPPSGQKKNDITAWQECVNNSMAQLEHQAVRIENLELMS 131

Query: 152 KYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKEL 211
           ++G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L
Sbjct: 132 QHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWVSL 191

Query: 212 CEKNMEIQVACFQLEGQIQELRREAAE 238
             KN EI+    QLE +I +++++  E
Sbjct: 192 VSKNYEIERTIVQLENEIYQIKQQHGE 216

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BLAST of MELO3C002120 vs. TrEMBL
Match: A0A0A0LQG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042680 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 1.3e-144
Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 1


Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPK KFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

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BLAST of MELO3C002120 vs. TrEMBL
Match: A0A067KSC7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05347 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 2.2e-104
Identity = 184/252 (73.02%), Postives = 218/252 (86.51%), Query Frame = 1


Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           M    N+ DILMLEAPP+PS+P W  S +AE++DALPYIDDDY  P VKAEVDRLVEEEM
Sbjct: 1   MTTTGNSSDILMLEAPPEPSRP-WSNSFNAEIVDALPYIDDDYGHPSVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYK-LETPPPNKK 120
           RRS K+PADFLKDLPPL K  FE++PMLA+EYERVRAG+PP  LD +RY  L+ PP NK 
Sbjct: 61  RRSHKKPADFLKDLPPLQKFSFENYPMLAKEYERVRAGKPPSTLDFSRYSHLDLPPANKM 120

Query: 121 NDETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQN 180
           N+ETAWKQ LQKA+CLL+HQV+RLENLDL+SKYGP++W QHN+QLEA+LSRMQKLA+EQN
Sbjct: 121 NEETAWKQALQKAECLLQHQVIRLENLDLISKYGPNVWIQHNQQLEAMLSRMQKLAREQN 180

Query: 181 EKIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKG 240
           EKIE VNRERK+HQQN AYE+ ALS QWKELC+KN+EIQ AC ++E QI+EL++EAAE+G
Sbjct: 181 EKIEAVNRERKYHQQNTAYEMSALSMQWKELCQKNIEIQAACTKIEMQIEELKKEAAERG 240

Query: 241 WNLEVNVENGSV 252
           WNLE N+ENGSV
Sbjct: 241 WNLEANIENGSV 251

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BLAST of MELO3C002120 vs. TrEMBL
Match: A0A151TKA6_CAJCA (Pre-mRNA-splicing factor SPF27 OS=Cajanus cajan GN=KK1_023817 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 5.0e-101
Identity = 179/249 (71.89%), Postives = 212/249 (85.14%), Query Frame = 1


Query: 3   ANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRR 62
           A+ +NG++LMLEAPP   +PA   S+DAE+IDALPYIDDDYADPRVK EVDRLVEEEMRR
Sbjct: 2   ADRSNGEVLMLEAPPSYGKPA---SSDAEIIDALPYIDDDYADPRVKLEVDRLVEEEMRR 61

Query: 63  SSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDE 122
           SSK+P DFLKD PPLP   F+++PM+AREYERVRAGRPPV LD +RY+LE PP NK+NDE
Sbjct: 62  SSKKPTDFLKDFPPLPNSSFQNYPMIAREYERVRAGRPPVALDRSRYELEMPPANKRNDE 121

Query: 123 TAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKI 182
           TAWKQ L +AQ LL++Q++R+ENLDLM KYGPD WK HN++LE  LSRMQKLAQEQNEKI
Sbjct: 122 TAWKQALNRAQRLLQYQMMRMENLDLMLKYGPDTWKLHNQRLEVYLSRMQKLAQEQNEKI 181

Query: 183 EKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWNL 242
           EKVNRERK+HQQN AYEL+ALS QWKELC+KN++I  AC  +E +I EL+REAAE+GWNL
Sbjct: 182 EKVNRERKYHQQNTAYELNALSMQWKELCQKNIDISAACASVENRINELKREAAERGWNL 241

Query: 243 EVNVENGSV 252
           E   ENG +
Sbjct: 242 ESVTENGQL 247

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BLAST of MELO3C002120 vs. TrEMBL
Match: V4UKY4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009263mg PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 5.5e-100
Identity = 175/248 (70.56%), Postives = 216/248 (87.10%), Query Frame = 1


Query: 2   AANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMR 61
           +++NNNGDILMLEAPP  ++P W    +AE+IDALPYIDDDYADPRVK EVDR+VE+EMR
Sbjct: 3   SSSNNNGDILMLEAPPDAARP-W----NAEIIDALPYIDDDYADPRVKEEVDRMVEQEMR 62

Query: 62  RSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKND 121
           RSSK+P+DFLK+LPPL K +FE+HPMLA+EYERVRAG+PP  LD  RY+LE  P NK+ND
Sbjct: 63  RSSKKPSDFLKNLPPLSKFRFENHPMLAKEYERVRAGKPPAVLDTTRYQLEILPANKRND 122

Query: 122 ETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEK 181
           E+AWKQ LQKAQ L +HQ++RLENL+LMSK+GP++W+QHN++LEALL  MQ+LAQEQNEK
Sbjct: 123 ESAWKQALQKAQRLSQHQLIRLENLELMSKHGPEVWRQHNQRLEALLLGMQRLAQEQNEK 182

Query: 182 IEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWN 241
           IE VNRERK+HQQN AYEL+ALSTQW+ELC KN+EIQ AC  +E  I+ELR+EAAE GWN
Sbjct: 183 IEAVNRERKYHQQNTAYELNALSTQWRELCAKNIEIQAACANIESHIEELRKEAAESGWN 242

Query: 242 LEVNVENG 250
           L++++E G
Sbjct: 243 LDIDMEKG 245

[Close]

BLAST of MELO3C002120 vs. TrEMBL
Match: A0A067F653_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025332mg PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 5.5e-100
Identity = 175/248 (70.56%), Postives = 216/248 (87.10%), Query Frame = 1


Query: 2   AANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMR 61
           +++NNNGDILMLEAPP  ++P W    +AE+IDALPYIDDDYADPRVK EVDR+VE+EMR
Sbjct: 3   SSSNNNGDILMLEAPPDAARP-W----NAEIIDALPYIDDDYADPRVKEEVDRMVEQEMR 62

Query: 62  RSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKND 121
           RSSK+P+DFLK+LPPL K +FE+HPMLA+EYERVRAG+PP  LD  RY+LE  P NK+ND
Sbjct: 63  RSSKKPSDFLKNLPPLSKFRFENHPMLAKEYERVRAGKPPAVLDTTRYQLEILPANKRND 122

Query: 122 ETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEK 181
           E+AWKQ LQKAQ L +HQ++RLENL+LMSK+GP++W+QHN++LEALL  MQ+LAQEQNEK
Sbjct: 123 ESAWKQALQKAQRLSQHQLIRLENLELMSKHGPEVWRQHNQRLEALLLGMQRLAQEQNEK 182

Query: 182 IEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWN 241
           IE VNRERK+HQQN AYEL+ALSTQW+ELC KN+EIQ AC  +E  I+ELR+EAAE GWN
Sbjct: 183 IEAVNRERKYHQQNTAYELNALSTQWRELCAKNIEIQAACANIESHIEELRKEAAESGWN 242

Query: 242 LEVNVENG 250
           L++++E G
Sbjct: 243 LDIDMEKG 245

[Close]

BLAST of MELO3C002120 vs. TAIR10
Match: AT3G18165.1 (AT3G18165.1 modifier of snc1,4)

HSP 1 Score: 340.5 bits (872), Expect = 9.0e-94
Identity = 162/244 (66.39%), Postives = 202/244 (82.79%), Query Frame = 1


Query: 6   NNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSK 65
           NNGD+LMLEA P+ ++P W  +A+AEVIDALPYIDDDY +P +K+EVDRLVEEEMRRSSK
Sbjct: 4   NNGDVLMLEATPEAARP-WASAANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEMRRSSK 63

Query: 66  RPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDV-ARYKLETPPPNKKNDETA 125
           +PADFLKDLPPLPK  F++ P+L +EYERVRAG+PPV +D  +RYKLE PP NK+ND+ A
Sbjct: 64  KPADFLKDLPPLPKFDFKNCPVLGKEYERVRAGKPPVRIDFESRYKLEMPPANKRNDDAA 123

Query: 126 WKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEK 185
           WKQ LQK Q  L+ +++ LENL+LMSK GP++W+Q+N +LE  L+RMQ+LAQEQNE+IEK
Sbjct: 124 WKQYLQKNQRSLQQKLIELENLELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQNEEIEK 183

Query: 186 VNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWNLEV 245
           VNRERK+HQQ  +YEL+ALS +W++LC KNMEIQ AC  LE QI   ++EAAE+GWNLE 
Sbjct: 184 VNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKKEAAERGWNLEE 243

Query: 246 NVEN 249
            +EN
Sbjct: 244 KLEN 246

[Close]

BLAST of MELO3C002120 vs. NCBI nr
Match: gi|659066815|ref|XP_008462680.1| (PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis melo])

HSP 1 Score: 521.9 bits (1343), Expect = 6.2e-145
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 1


Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

[Close]

BLAST of MELO3C002120 vs. NCBI nr
Match: gi|449439443|ref|XP_004137495.1| (PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus])

HSP 1 Score: 520.4 bits (1339), Expect = 1.8e-144
Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 1


Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPK KFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

[Close]

BLAST of MELO3C002120 vs. NCBI nr
Match: gi|802599707|ref|XP_012072552.1| (PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Jatropha curcas])

HSP 1 Score: 386.7 bits (992), Expect = 3.1e-104
Identity = 184/252 (73.02%), Postives = 218/252 (86.51%), Query Frame = 1


Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           M    N+ DILMLEAPP+PS+P W  S +AE++DALPYIDDDY  P VKAEVDRLVEEEM
Sbjct: 1   MTTTGNSSDILMLEAPPEPSRP-WSNSFNAEIVDALPYIDDDYGHPSVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYK-LETPPPNKK 120
           RRS K+PADFLKDLPPL K  FE++PMLA+EYERVRAG+PP  LD +RY  L+ PP NK 
Sbjct: 61  RRSHKKPADFLKDLPPLQKFSFENYPMLAKEYERVRAGKPPSTLDFSRYSHLDLPPANKM 120

Query: 121 NDETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQN 180
           N+ETAWKQ LQKA+CLL+HQV+RLENLDL+SKYGP++W QHN+QLEA+LSRMQKLA+EQN
Sbjct: 121 NEETAWKQALQKAECLLQHQVIRLENLDLISKYGPNVWIQHNQQLEAMLSRMQKLAREQN 180

Query: 181 EKIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKG 240
           EKIE VNRERK+HQQN AYE+ ALS QWKELC+KN+EIQ AC ++E QI+EL++EAAE+G
Sbjct: 181 EKIEAVNRERKYHQQNTAYEMSALSMQWKELCQKNIEIQAACTKIEMQIEELKKEAAERG 240

Query: 241 WNLEVNVENGSV 252
           WNLE N+ENGSV
Sbjct: 241 WNLEANIENGSV 251

[Close]

BLAST of MELO3C002120 vs. NCBI nr
Match: gi|1009131528|ref|XP_015882890.1| (PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Ziziphus jujuba])

HSP 1 Score: 386.3 bits (991), Expect = 4.1e-104
Identity = 186/249 (74.70%), Postives = 212/249 (85.14%), Query Frame = 1


Query: 3   ANNNNGDILMLEAPPQ-PSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMR 62
           ANNNNG+ILMLEAPPQ P+ P+WR SA+AE+IDALPYIDDDY +P VK EVDRLVEEEMR
Sbjct: 2   ANNNNGEILMLEAPPQQPTGPSWRPSANAEIIDALPYIDDDYGNPVVKKEVDRLVEEEMR 61

Query: 63  RSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKND 122
           RS K+P DFLKDLPPLPK  F+D+PMLAREYERVRA +PP+ LD +R KLETPP NK+ND
Sbjct: 62  RSFKKPNDFLKDLPPLPKSNFQDNPMLAREYERVRAAKPPIILDFSRDKLETPPVNKRND 121

Query: 123 ETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEK 182
           ETAWKQ LQKAQC  +HQV RLENLD+  KYG + WKQHN++LE LLSRMQKLAQE  EK
Sbjct: 122 ETAWKQALQKAQCSFQHQVFRLENLDVTFKYGSEAWKQHNRRLEVLLSRMQKLAQEHFEK 181

Query: 183 IEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWN 242
           IE VNR+RKFHQQN A+EL+ALS QWKELC+KN+EIQ AC QLE  I EL++EAAE+GWN
Sbjct: 182 IEAVNRDRKFHQQNTAFELNALSAQWKELCQKNIEIQAACAQLENHISELKKEAAERGWN 241

Query: 243 LEVNVENGS 251
           LE   ENGS
Sbjct: 242 LETGAENGS 250

[Close]

BLAST of MELO3C002120 vs. NCBI nr
Match: gi|224135477|ref|XP_002322083.1| (hypothetical protein POPTR_0015s04220g [Populus trichocarpa])

HSP 1 Score: 378.6 bits (971), Expect = 8.5e-102
Identity = 178/250 (71.20%), Postives = 220/250 (88.00%), Query Frame = 1


Query: 3   ANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRR 62
           +N+ NGD+LMLEA P+ S+P W  S++AE+IDALPYIDDDY +P VKAEVDRLVEEEMRR
Sbjct: 4   SNSANGDMLMLEAAPEASRP-WSTSSNAEIIDALPYIDDDYGNPSVKAEVDRLVEEEMRR 63

Query: 63  SSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYK-LETPPPNKKND 122
           SSK+P+DFLK+LPP+PK  FE++PMLA+EYERVRAGRPPV LD +RY  L+ P  NK ND
Sbjct: 64  SSKKPSDFLKELPPVPKFTFENYPMLAKEYERVRAGRPPVTLDFSRYSHLDLPAANKMND 123

Query: 123 ETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEK 182
           ETAWKQ LQ+AQ LL+HQV+RLENL+LMSKYGP++W QHN+QLE +L+R QKLA+EQNEK
Sbjct: 124 ETAWKQALQRAQRLLQHQVIRLENLELMSKYGPEVWIQHNRQLETMLTRTQKLAREQNEK 183

Query: 183 IEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWN 242
           IE VNRERK+HQQN AYEL+ALS QWKELC+KN+EIQ AC ++E QI+EL+RE++E+GWN
Sbjct: 184 IEAVNRERKYHQQNTAYELNALSAQWKELCQKNIEIQEACIKIENQIEELKRESSERGWN 243

Query: 243 LEVNVENGSV 252
           +E N+ENGS+
Sbjct: 244 VEANIENGSL 252

The following BLAST results are available for this feature:

BLAST of MELO3C002120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SPF27_ARATH	1.6e-92	66.39	Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana GN=MOS4 PE=1 SV=1	[more]
SPF27_XENTR	3.0e-30	34.43	Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis GN=bcas2 PE=2 SV=1	[more]
SPF27_MOUSE	5.1e-30	34.95	Pre-mRNA-splicing factor SPF27 OS=Mus musculus GN=Bcas2 PE=1 SV=1	[more]
SPF27_HUMAN	5.1e-30	34.95	Pre-mRNA-splicing factor SPF27 OS=Homo sapiens GN=BCAS2 PE=1 SV=1	[more]
SPF27_PONAB	5.1e-30	35.75	Pre-mRNA-splicing factor SPF27 OS=Pongo abelii GN=BCAS2 PE=2 SV=1	[more]

BLAST of MELO3C002120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQG2_CUCSA	1.3e-144	99.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042680 PE=4 SV=1	[more]
A0A067KSC7_JATCU	2.2e-104	73.02	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05347 PE=4 SV=1	[more]
A0A151TKA6_CAJCA	5.0e-101	71.89	Pre-mRNA-splicing factor SPF27 OS=Cajanus cajan GN=KK1_023817 PE=4 SV=1	[more]
V4UKY4_9ROSI	5.5e-100	70.56	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009263mg PE=4 SV=1	[more]
A0A067F653_CITSI	5.5e-100	70.56	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025332mg PE=4 SV=1	[more]

BLAST of MELO3C002120 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18165.1	9.0e-94	66.39	modifier of snc1,4	[more]

BLAST of MELO3C002120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659066815\|ref\|XP_008462680.1\|	6.2e-145	100.00	PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis melo]	[more]
gi\|449439443\|ref\|XP_004137495.1\|	1.8e-144	99.61	PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus]	[more]
gi\|802599707\|ref\|XP_012072552.1\|	3.1e-104	73.02	PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Jatropha curcas]	[more]
gi\|1009131528\|ref\|XP_015882890.1\|	4.1e-104	74.70	PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Ziziphus jujuba]	[more]
gi\|224135477\|ref\|XP_002322083.1\|	8.5e-102	71.20	hypothetical protein POPTR_0015s04220g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008409	SPF27

Vocabulary: **Biological Process**
Term	Definition
GO:0006397	mRNA processing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009870	defense response signaling pathway, resistance gene-dependent
biological_process	GO:0010204	defense response signaling pathway, resistance gene-independent
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0006397	mRNA processing
biological_process	GO:0001510	RNA methylation
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0071012	catalytic step 1 spliceosome
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0071011	precatalytic spliceosome
cellular_component	GO:0000974	Prp19 complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU50860	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002120T1	MELO3C002120T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU50860	MU50860	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008409	Pre-mRNA-splicing factor SPF27	PFAM	PF05700	BCAS2	coord: 31..237 score: 2.5
None	No IPR available	unknown	Coil	Coil	coord: 214..234 score: -coord: 157..195 scor
None	No IPR available	PANTHER	PTHR13296	BCAS2 PROTEIN	coord: 11..245 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C002120	Csa1G042680	Cucumber (Chinese Long) v2	cumeB027
MELO3C002120	Cla018468	Watermelon (97103) v1	mewmB174
MELO3C002120	ClCG04G010780	Watermelon (Charleston Gray)	mewcgB154
MELO3C002120	Cla97C04G077600	Watermelon (97103) v2	mewmbB159
MELO3C002120	Bhi08G001062	Wax gourd	mewgoB173
MELO3C002120	CSPI01G07080	Wild cucumber (PI 183967)	cpimeB024
MELO3C002120	Cucsa.121810	Cucumber (Gy14) v1	cgymeB185
MELO3C002120	CmaCh13G010010	Cucurbita maxima (Rimu)	cmameB193
MELO3C002120	CmaCh18G000590	Cucurbita maxima (Rimu)	cmameB365
MELO3C002120	CmoCh18G000460	Cucurbita moschata (Rifu)	cmomeB356
MELO3C002120	CmoCh13G010370	Cucurbita moschata (Rifu)	cmomeB180
MELO3C002120	Lsi02G002200	Bottle gourd (USVL1VR-Ls)	lsimeB179
MELO3C002120	Cp4.1LG09g11170	Cucurbita pepo (Zucchini)	cpemeB026
MELO3C002120	Cp4.1LG20g01510	Cucurbita pepo (Zucchini)	cpemeB478
MELO3C002120	CsGy1G006890	Cucumber (Gy14) v2	cgybmeB022
MELO3C002120	Carg22734	Silver-seed gourd	carmeB0516
MELO3C002120	Carg04837	Silver-seed gourd	carmeB0393
MELO3C002120	CsaV3_1G007020	Cucumber (Chinese Long) v3	cucmeB024

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C002120	Watermelon (Charleston Gray)	mewcgB159
MELO3C002120	Watermelon (97103) v1	mewmB180
MELO3C002120	Cucurbita pepo (Zucchini)	cpemeB321
MELO3C002120	Bottle gourd (USVL1VR-Ls)	lsimeB391
MELO3C002120	Cucumber (Gy14) v2	cgybmeB026
MELO3C002120	Silver-seed gourd	carmeB0598
MELO3C002120	Silver-seed gourd	carmeB0783
MELO3C002120	Cucumber (Chinese Long) v3	cucmeB026
MELO3C002120	Watermelon (97103) v2	mewmbB164
MELO3C002120	Wax gourd	mewgoB195
MELO3C002120	Melon (DHL92) v3.5.1	memeB066
MELO3C002120	Cucumber (Gy14) v1	cgymeB157
MELO3C002120	Cucurbita maxima (Rimu)	cmameB054
MELO3C002120	Cucurbita maxima (Rimu)	cmameB090
MELO3C002120	Cucurbita moschata (Rifu)	cmomeB044
MELO3C002120	Cucurbita moschata (Rifu)	cmomeB084
MELO3C002120	Wild cucumber (PI 183967)	cpimeB029
MELO3C002120	Cucumber (Chinese Long) v2	cumeB033