CmoCh13G010370 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh13G010370
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPre-mRNA-splicing factor SPF27 like
LocationCmo_Chr13 : 8722227 .. 8724185 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGGCCGCGGAATCTCAATCTTCTTGAACTTGACCTGTAAATCTAAAGCTCAAAACCTTTGTTGCTTGTTGTTGTGACAATGGCGATCAACAACAATAGCGGGGATATCCTGATGCTCGAGGCTCCACCGCAGCCATCTCAACCAGCGTGGCGCGTTTCTGCAGATGCGGAGGTAATCGACGCCTTGCCCTACATCGACGATGACTATGCGGACCCAAGGGTCAAAGCAGAGGTCGATCGATTAGTGGAGGAAGAGATGCGGCGCAGCTCCAAGCGACCTGCCGATTTTCTCAAAGACTTGCCTCCTCTTCCCAAGTTCAAATTTGAGGTAGGTTAGGCTGCAATTTCCTTTCTCGCCGGAGCTTCTTCTAGGTTACGCACTTGTAGTTCCGCTTGATTTTATAGGTTATCGTGCCTGAAAGAACGAATTACTTTTTCTCACTGGTTTTATTTGATAGACAGTTACTAATGCCGAAACTAGAAGTGTTTAGAAGCTTCATCTGCTAGTTTTCTTCCAAAACATCCTCTATTTGTTTTATCCTCAAGTCACTGTGCGTCATCCAATGAATATATGACGCGCTACTCTACATAAGTTATTTTGCCACTACATTGGATAGATCTTGAAATTATTACGAAGTGTGATAATATTAGCAATAGTCTATTCAACTGACGTAGTTTGAACTCAGGATCATCCAATGCTTGCGAGAGAGTATGAACGTGTAAGAGCTGGGAGGCCTCCAATGCCTCTCGATGTTGCTAGATATAAATTAGAGACACCGCCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAGAGCTCAATGCCTACTCCAGCATCAAGTGCTGAGGTGAATTTTAGCATGTTAAAGTTGTTCCTGGCATTTAAGCTTTGTATTTCTGGAAAACATAATTTTATGGAGAACAGTTAGAGTTGGCTACTTGAACTCATACAGTTCTTCTAATATCTGCCACACATAGTTAACATTTCTATGCCTTTTCTTGGTTGCAGTTGGTTTCTCATATCTAGTTTGTGTACCAATGAGCCATGACTGTGAGAGGTGTAATTTATAAAATTTTGATAAGAAAAGACATAATTCGGAAGATTATACGCCCAAACATGAAATTAAACATTAGAAAGGTTTTGACGATTCATTAGGAGATAATAAGAATATGGTAATCTGATGACTGGTGATGCTGTTGTCTCATACTGCAGGCTGGAAAATTTGGAACTGATGTCAAAATATGCCCCTGATATCTGGAAGCAACACAACAAACAGTTGGAAGCACTTCTATCAAGGTTTGTTACCATATTTCTTTTTGATGTCTTATATTTTGTGTACTAATTTTGTATTTATGTTGATCAAATATGATTCCAAGTCAAATCATTTGGCTTATCTCGTTCTATAGTGTAAATATGATTTCTGAATGAAGTGAACATGAAATTTAAGTACATCTGTGATCTGACCAAAGTAGACGTATATGATTGTTAATATATTGTCATGATGTTATCAGAATGCAAAAATTAGCTCAAGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAAGTAAGTAGCATCCCTGTAATTCATATTTCAATGGGGCAGAGGTCAATTCTTTGGAATGTTTGGTTGATTATTTATGCGATGATCAGCAAAACGCTGCATATGAGCTTCATGCTTTGTCCACACAATGGAAGGAGCTGTGCGAGAAAAATATGGAAATCCAAGTGGCATGCTCTCAAATAGAGGGTCAAATCCAGGAACTAAGGAGTGAGGCAGCAGAAAAGTAATCTTGCCTTCTTCTATTTAATCTATTTTTGTCCTACATATGTTTGGCATGTTTAGTACTGATCTGTGGGTTATGATTCCAGAGGCTGGAATTTAGAAGTCAATGTAGAGAATGGTTCTGTTTCGTTCCCAGTGTCATAA

mRNA sequence

CGGGCCGCGGAATCTCAATCTTCTTGAACTTGACCTGTAAATCTAAAGCTCAAAACCTTTGTTGCTTGTTGTTGTGACAATGGCGATCAACAACAATAGCGGGGATATCCTGATGCTCGAGGCTCCACCGCAGCCATCTCAACCAGCGTGGCGCGTTTCTGCAGATGCGGAGGTAATCGACGCCTTGCCCTACATCGACGATGACTATGCGGACCCAAGGGTCAAAGCAGAGGTCGATCGATTAGTGGAGGAAGAGATGCGGCGCAGCTCCAAGCGACCTGCCGATTTTCTCAAAGACTTGCCTCCTCTTCCCAAGTTCAAATTTGAGGATCATCCAATGCTTGCGAGAGAGTATGAACGTGTAAGAGCTGGGAGGCCTCCAATGCCTCTCGATGTTGCTAGATATAAATTAGAGACACCGCCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAGAGCTCAATGCCTACTCCAGCATCAAGTGCTGAGGCTGGAAAATTTGGAACTGATGTCAAAATATGCCCCTGATATCTGGAAGCAACACAACAAACAGTTGGAAGCACTTCTATCAAGAATGCAAAAATTAGCTCAAGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAACAAAACGCTGCATATGAGCTTCATGCTTTGTCCACACAATGGAAGGAGCTGTGCGAGAAAAATATGGAAATCCAAGTGGCATGCTCTCAAATAGAGGGTCAAATCCAGGAACTAAGGAGTGAGGCAGCAGAAAAAGGCTGGAATTTAGAAGTCAATGTAGAGAATGGTTCTGTTTCGTTCCCAGTGTCATAA

Coding sequence (CDS)

ATGGCGATCAACAACAATAGCGGGGATATCCTGATGCTCGAGGCTCCACCGCAGCCATCTCAACCAGCGTGGCGCGTTTCTGCAGATGCGGAGGTAATCGACGCCTTGCCCTACATCGACGATGACTATGCGGACCCAAGGGTCAAAGCAGAGGTCGATCGATTAGTGGAGGAAGAGATGCGGCGCAGCTCCAAGCGACCTGCCGATTTTCTCAAAGACTTGCCTCCTCTTCCCAAGTTCAAATTTGAGGATCATCCAATGCTTGCGAGAGAGTATGAACGTGTAAGAGCTGGGAGGCCTCCAATGCCTCTCGATGTTGCTAGATATAAATTAGAGACACCGCCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAGAGCTCAATGCCTACTCCAGCATCAAGTGCTGAGGCTGGAAAATTTGGAACTGATGTCAAAATATGCCCCTGATATCTGGAAGCAACACAACAAACAGTTGGAAGCACTTCTATCAAGAATGCAAAAATTAGCTCAAGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAACAAAACGCTGCATATGAGCTTCATGCTTTGTCCACACAATGGAAGGAGCTGTGCGAGAAAAATATGGAAATCCAAGTGGCATGCTCTCAAATAGAGGGTCAAATCCAGGAACTAAGGAGTGAGGCAGCAGAAAAAGGCTGGAATTTAGAAGTCAATGTAGAGAATGGTTCTGTTTCGTTCCCAGTGTCATAA
Homology
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BLAST of CmoCh13G010370 vs. Swiss-Prot
Match: SPF27_ARATH (Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana GN=MOS4 PE=1 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 6.9e-88
Identity = 160/244 (65.57%), Postives = 204/244 (83.61%), Query Frame = 1 

Query: 6   NSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSK 65
           N+GD+LMLEA P+ ++P W  +A+AEVIDALPYIDDDY +P +K+EVDRLVEEEMRRSSK
Sbjct: 4   NNGDVLMLEATPEAARP-WASAANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEMRRSSK 63

Query: 66  RPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDV-ARYKLETPPPNKKNDETA 125
           +PADFLKDLPPLPKF F++ P+L +EYERVRAG+PP+ +D  +RYKLE PP NK+ND+ A
Sbjct: 64  KPADFLKDLPPLPKFDFKNCPVLGKEYERVRAGKPPVRIDFESRYKLEMPPANKRNDDAA 123

Query: 126 WKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQNEKIEK 185
           WKQ LQ+ Q  LQ +++ LENLELMSK  P++W+Q+N +LE  L+RMQ+LAQEQNE+IEK
Sbjct: 124 WKQYLQKNQRSLQQKLIELENLELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQNEEIEK 183

Query: 186 VNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGWNLEV 245
           VNRERK+HQQ  +YEL+ALS +W++LC KNMEIQ AC+ +E QI   + EAAE+GWNLE 
Sbjct: 184 VNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKKEAAERGWNLEE 243

Query: 246 NVEN 249
            +EN
Sbjct: 244 KLEN 246

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BLAST of CmoCh13G010370 vs. Swiss-Prot
Match: SPF27_XENTR (Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis GN=bcas2 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-26
Identity = 73/212 (34.43%), Postives = 116/212 (54.72%), Query Frame = 1 

Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKFKFEDHPMLARE 91
           V+DALPY D  Y    V+     LVEEE RR   RP        P P +   +  ++  E
Sbjct: 12  VVDALPYFDQGYDAQGVREAAAALVEEETRRY--RPTKNYLSYLPTPDYSAFETEIMRNE 71

Query: 92  YERVRAGRPPMPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLQHQVLRLENLELMSK 151
           +ER+ + +P   L + RY+L  P   ++ND TAW++ +  +   L+HQ +R+ENLELMS+
Sbjct: 72  FERLSSRQPLELLSMKRYELPAPLSGQRNDITAWQECVNNSMAQLEHQAVRIENLELMSQ 131

Query: 152 YAPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELC 211
           +  + WK +N+ L  ++   QK  Q+  +KI+ +N +RK  Q  A   L  + + W  L 
Sbjct: 132 HGCNAWKVYNENLLHMIDCAQKDLQKLRKKIQDLNWQRKNSQLTAGARLREMESTWVSLV 191

Query: 212 EKNMEIQVACSQIEGQIQELRSEAAEKGWNLE 244
            KN EI+ A  Q+E ++ +L+  + E   N+E
Sbjct: 192 SKNYEIERAIVQMENEVYQLKERSGENKENIE 221

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BLAST of CmoCh13G010370 vs. Swiss-Prot
Match: SPF27_DANRE (Pre-mRNA-splicing factor SPF27 OS=Danio rerio GN=bcas2 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.4e-26
Identity = 70/206 (33.98%), Postives = 109/206 (52.91%), Query Frame = 1 

Query: 33  IDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKFKFEDHPMLAREY 92
           +DALPY D  Y    V+     LVEEE RR   RP        P P F   +  ++  E+
Sbjct: 13  VDALPYFDQGYDATGVREAAAALVEEETRRY--RPTKNYLSYLPTPDFSAFETEIMRNEF 72

Query: 93  ERVRAGRPPMPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLQHQVLRLENLELMSKY 152
           ER+ A +P   L + RY+L  P   +KND TAW+  +  +   L+HQ +R+ENLELM++Y
Sbjct: 73  ERLAARQPMELLSMKRYELPAPSSGQKNDMTAWQDCVNNSMAQLEHQAVRIENLELMAQY 132

Query: 153 APDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELCE 212
             + WK  N  L  ++   QK  Q   ++I+ +N +RK  Q     +L  L + W  L  
Sbjct: 133 GTNAWKMSNDNLALMIENSQKELQNVRKEIQDLNWQRKNDQLAGGAKLRELESNWVSLVS 192

Query: 213 KNMEIQVACSQIEGQIQELRSEAAEK 239
           KN EI+ A  Q+E ++ +++ +  ++
Sbjct: 193 KNYEIERAIVQLENEVAQMKQQQGDE 216

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BLAST of CmoCh13G010370 vs. Swiss-Prot
Match: SPF27_MOUSE (Pre-mRNA-splicing factor SPF27 OS=Mus musculus GN=Bcas2 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.8e-26
Identity = 71/206 (34.47%), Postives = 112/206 (54.37%), Query Frame = 1 

Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKFKFEDHPMLARE 91
           V+DALPY D  Y  P V+     LVEEE RR   RP          P +   +  ++  E
Sbjct: 12  VVDALPYFDQGYEAPGVREAAAALVEEETRRY--RPTKNYLSYLTAPDYSAFETDIMRNE 71

Query: 92  YERVRAGRPPMPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLQHQVLRLENLELMSK 151
           +ER+ A +P   L + RY+L  P   +KND TAW++ +  +   L+HQ +R+ENLELMS+
Sbjct: 72  FERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQ 131

Query: 152 YAPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELC 211
           +  + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L 
Sbjct: 132 HGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWVSLV 191

Query: 212 EKNMEIQVACSQIEGQIQELRSEAAE 238
            KN EI+    Q+E +I +++ +  E
Sbjct: 192 SKNYEIERTIVQLENEIYQIKQQHGE 215

[Close]
BLAST of CmoCh13G010370 vs. Swiss-Prot
Match: SPF27_HUMAN (Pre-mRNA-splicing factor SPF27 OS=Homo sapiens GN=BCAS2 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.8e-26
Identity = 71/206 (34.47%), Postives = 112/206 (54.37%), Query Frame = 1 

Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKFKFEDHPMLARE 91
           V+DALPY D  Y  P V+     LVEEE RR   RP          P +   +  ++  E
Sbjct: 12  VVDALPYFDQGYEAPGVREAAAALVEEETRRY--RPTKNYLSYLTAPDYSAFETDIMRNE 71

Query: 92  YERVRAGRPPMPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLQHQVLRLENLELMSK 151
           +ER+ A +P   L + RY+L  P   +KND TAW++ +  +   L+HQ +R+ENLELMS+
Sbjct: 72  FERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQ 131

Query: 152 YAPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELC 211
           +  + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L 
Sbjct: 132 HGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWVSLV 191

Query: 212 EKNMEIQVACSQIEGQIQELRSEAAE 238
            KN EI+    Q+E +I +++ +  E
Sbjct: 192 SKNYEIERTIVQLENEIYQIKQQHGE 215

[Close]
BLAST of CmoCh13G010370 vs. TrEMBL
Match: A0A0A0LQG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042680 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 1.4e-135
Identity = 245/256 (95.70%), Postives = 251/256 (98.05%), Query Frame = 1 

Query: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NNN+GDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKY PDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVAC Q+EGQIQELR EAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSFPVS 257
           NLEVNVENGSVS PVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

[Close]
BLAST of CmoCh13G010370 vs. TrEMBL
Match: A0A067KSC7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05347 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 1.1e-100
Identity = 185/252 (73.41%), Postives = 218/252 (86.51%), Query Frame = 1 

Query: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           M    NS DILMLEAPP+PS+P W  S +AE++DALPYIDDDY  P VKAEVDRLVEEEM
Sbjct: 1   MTTTGNSSDILMLEAPPEPSRP-WSNSFNAEIVDALPYIDDDYGHPSVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYK-LETPPPNKK 120
           RRS K+PADFLKDLPPL KF FE++PMLA+EYERVRAG+PP  LD +RY  L+ PP NK 
Sbjct: 61  RRSHKKPADFLKDLPPLQKFSFENYPMLAKEYERVRAGKPPSTLDFSRYSHLDLPPANKM 120

Query: 121 NDETAWKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQN 180
           N+ETAWKQ LQ+A+CLLQHQV+RLENL+L+SKY P++W QHN+QLEA+LSRMQKLA+EQN
Sbjct: 121 NEETAWKQALQKAECLLQHQVIRLENLDLISKYGPNVWIQHNQQLEAMLSRMQKLAREQN 180

Query: 181 EKIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKG 240
           EKIE VNRERK+HQQN AYE+ ALS QWKELC+KN+EIQ AC++IE QI+EL+ EAAE+G
Sbjct: 181 EKIEAVNRERKYHQQNTAYEMSALSMQWKELCQKNIEIQAACTKIEMQIEELKKEAAERG 240

Query: 241 WNLEVNVENGSV 252
           WNLE N+ENGSV
Sbjct: 241 WNLEANIENGSV 251

[Close]
BLAST of CmoCh13G010370 vs. TrEMBL
Match: B9IE93_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s04220g PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 2.6e-97
Identity = 179/249 (71.89%), Postives = 218/249 (87.55%), Query Frame = 1 

Query: 4   NNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRS 63
           N+ +GD+LMLEA P+ S+P W  S++AE+IDALPYIDDDY +P VKAEVDRLVEEEMRRS
Sbjct: 5   NSANGDMLMLEAAPEASRP-WSTSSNAEIIDALPYIDDDYGNPSVKAEVDRLVEEEMRRS 64

Query: 64  SKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYK-LETPPPNKKNDE 123
           SK+P+DFLK+LPP+PKF FE++PMLA+EYERVRAGRPP+ LD +RY  L+ P  NK NDE
Sbjct: 65  SKKPSDFLKELPPVPKFTFENYPMLAKEYERVRAGRPPVTLDFSRYSHLDLPAANKMNDE 124

Query: 124 TAWKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQNEKI 183
           TAWKQ LQRAQ LLQHQV+RLENLELMSKY P++W QHN+QLE +L+R QKLA+EQNEKI
Sbjct: 125 TAWKQALQRAQRLLQHQVIRLENLELMSKYGPEVWIQHNRQLETMLTRTQKLAREQNEKI 184

Query: 184 EKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGWNL 243
           E VNRERK+HQQN AYEL+ALS QWKELC+KN+EIQ AC +IE QI+EL+ E++E+GWN+
Sbjct: 185 EAVNRERKYHQQNTAYELNALSAQWKELCQKNIEIQEACIKIENQIEELKRESSERGWNV 244

Query: 244 EVNVENGSV 252
           E N+ENGS+
Sbjct: 245 EANIENGSL 252

[Close]
BLAST of CmoCh13G010370 vs. TrEMBL
Match: V4UKY4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009263mg PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.1e-95
Identity = 176/246 (71.54%), Postives = 214/246 (86.99%), Query Frame = 1 

Query: 4   NNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRS 63
           +NN+GDILMLEAPP  ++P W    +AE+IDALPYIDDDYADPRVK EVDR+VE+EMRRS
Sbjct: 5   SNNNGDILMLEAPPDAARP-W----NAEIIDALPYIDDDYADPRVKEEVDRMVEQEMRRS 64

Query: 64  SKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKNDET 123
           SK+P+DFLK+LPPL KF+FE+HPMLA+EYERVRAG+PP  LD  RY+LE  P NK+NDE+
Sbjct: 65  SKKPSDFLKNLPPLSKFRFENHPMLAKEYERVRAGKPPAVLDTTRYQLEILPANKRNDES 124

Query: 124 AWKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQNEKIE 183
           AWKQ LQ+AQ L QHQ++RLENLELMSK+ P++W+QHN++LEALL  MQ+LAQEQNEKIE
Sbjct: 125 AWKQALQKAQRLSQHQLIRLENLELMSKHGPEVWRQHNQRLEALLLGMQRLAQEQNEKIE 184

Query: 184 KVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGWNLE 243
            VNRERK+HQQN AYEL+ALSTQW+ELC KN+EIQ AC+ IE  I+ELR EAAE GWNL+
Sbjct: 185 AVNRERKYHQQNTAYELNALSTQWRELCAKNIEIQAACANIESHIEELRKEAAESGWNLD 244

Query: 244 VNVENG 250
           +++E G
Sbjct: 245 IDMEKG 245

[Close]
BLAST of CmoCh13G010370 vs. TrEMBL
Match: A0A067F653_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025332mg PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.1e-95
Identity = 176/246 (71.54%), Postives = 214/246 (86.99%), Query Frame = 1 

Query: 4   NNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRS 63
           +NN+GDILMLEAPP  ++P W    +AE+IDALPYIDDDYADPRVK EVDR+VE+EMRRS
Sbjct: 5   SNNNGDILMLEAPPDAARP-W----NAEIIDALPYIDDDYADPRVKEEVDRMVEQEMRRS 64

Query: 64  SKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKNDET 123
           SK+P+DFLK+LPPL KF+FE+HPMLA+EYERVRAG+PP  LD  RY+LE  P NK+NDE+
Sbjct: 65  SKKPSDFLKNLPPLSKFRFENHPMLAKEYERVRAGKPPAVLDTTRYQLEILPANKRNDES 124

Query: 124 AWKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQNEKIE 183
           AWKQ LQ+AQ L QHQ++RLENLELMSK+ P++W+QHN++LEALL  MQ+LAQEQNEKIE
Sbjct: 125 AWKQALQKAQRLSQHQLIRLENLELMSKHGPEVWRQHNQRLEALLLGMQRLAQEQNEKIE 184

Query: 184 KVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGWNLE 243
            VNRERK+HQQN AYEL+ALSTQW+ELC KN+EIQ AC+ IE  I+ELR EAAE GWNL+
Sbjct: 185 AVNRERKYHQQNTAYELNALSTQWRELCAKNIEIQAACANIESHIEELRKEAAESGWNLD 244

Query: 244 VNVENG 250
           +++E G
Sbjct: 245 IDMEKG 245

[Close]
BLAST of CmoCh13G010370 vs. TAIR10
Match: AT3G18165.1 (AT3G18165.1 modifier of snc1,4)

HSP 1 Score: 325.1 bits (832), Expect = 3.9e-89
Identity = 160/244 (65.57%), Postives = 204/244 (83.61%), Query Frame = 1 

Query: 6   NSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSK 65
           N+GD+LMLEA P+ ++P W  +A+AEVIDALPYIDDDY +P +K+EVDRLVEEEMRRSSK
Sbjct: 4   NNGDVLMLEATPEAARP-WASAANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEMRRSSK 63

Query: 66  RPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDV-ARYKLETPPPNKKNDETA 125
           +PADFLKDLPPLPKF F++ P+L +EYERVRAG+PP+ +D  +RYKLE PP NK+ND+ A
Sbjct: 64  KPADFLKDLPPLPKFDFKNCPVLGKEYERVRAGKPPVRIDFESRYKLEMPPANKRNDDAA 123

Query: 126 WKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQNEKIEK 185
           WKQ LQ+ Q  LQ +++ LENLELMSK  P++W+Q+N +LE  L+RMQ+LAQEQNE+IEK
Sbjct: 124 WKQYLQKNQRSLQQKLIELENLELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQNEEIEK 183

Query: 186 VNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGWNLEV 245
           VNRERK+HQQ  +YEL+ALS +W++LC KNMEIQ AC+ +E QI   + EAAE+GWNLE 
Sbjct: 184 VNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKKEAAERGWNLEE 243

Query: 246 NVEN 249
            +EN
Sbjct: 244 KLEN 246

[Close]
BLAST of CmoCh13G010370 vs. NCBI nr
Match: gi|449439443|ref|XP_004137495.1| (PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus])

HSP 1 Score: 490.3 bits (1261), Expect = 2.0e-135
Identity = 245/256 (95.70%), Postives = 251/256 (98.05%), Query Frame = 1 

Query: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NNN+GDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKY PDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVAC Q+EGQIQELR EAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSFPVS 257
           NLEVNVENGSVS PVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

[Close]
BLAST of CmoCh13G010370 vs. NCBI nr
Match: gi|659066815|ref|XP_008462680.1| (PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis melo])

HSP 1 Score: 488.0 bits (1255), Expect = 9.9e-135
Identity = 244/256 (95.31%), Postives = 250/256 (97.66%), Query Frame = 1 

Query: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NNN+GDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPK KFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKY PDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVAC Q+EGQIQELR EAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSFPVS 257
           NLEVNVENGSVS PVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

[Close]
BLAST of CmoCh13G010370 vs. NCBI nr
Match: gi|802599707|ref|XP_012072552.1| (PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Jatropha curcas])

HSP 1 Score: 374.4 bits (960), Expect = 1.6e-100
Identity = 185/252 (73.41%), Postives = 218/252 (86.51%), Query Frame = 1 

Query: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           M    NS DILMLEAPP+PS+P W  S +AE++DALPYIDDDY  P VKAEVDRLVEEEM
Sbjct: 1   MTTTGNSSDILMLEAPPEPSRP-WSNSFNAEIVDALPYIDDDYGHPSVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYK-LETPPPNKK 120
           RRS K+PADFLKDLPPL KF FE++PMLA+EYERVRAG+PP  LD +RY  L+ PP NK 
Sbjct: 61  RRSHKKPADFLKDLPPLQKFSFENYPMLAKEYERVRAGKPPSTLDFSRYSHLDLPPANKM 120

Query: 121 NDETAWKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQN 180
           N+ETAWKQ LQ+A+CLLQHQV+RLENL+L+SKY P++W QHN+QLEA+LSRMQKLA+EQN
Sbjct: 121 NEETAWKQALQKAECLLQHQVIRLENLDLISKYGPNVWIQHNQQLEAMLSRMQKLAREQN 180

Query: 181 EKIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKG 240
           EKIE VNRERK+HQQN AYE+ ALS QWKELC+KN+EIQ AC++IE QI+EL+ EAAE+G
Sbjct: 181 EKIEAVNRERKYHQQNTAYEMSALSMQWKELCQKNIEIQAACTKIEMQIEELKKEAAERG 240

Query: 241 WNLEVNVENGSV 252
           WNLE N+ENGSV
Sbjct: 241 WNLEANIENGSV 251

[Close]
BLAST of CmoCh13G010370 vs. NCBI nr
Match: gi|1009131528|ref|XP_015882890.1| (PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Ziziphus jujuba])

HSP 1 Score: 364.8 bits (935), Expect = 1.3e-97
Identity = 181/248 (72.98%), Postives = 210/248 (84.68%), Query Frame = 1 

Query: 4   NNNSGDILMLEAPPQ-PSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRR 63
           NNN+G+ILMLEAPPQ P+ P+WR SA+AE+IDALPYIDDDY +P VK EVDRLVEEEMRR
Sbjct: 3   NNNNGEILMLEAPPQQPTGPSWRPSANAEIIDALPYIDDDYGNPVVKKEVDRLVEEEMRR 62

Query: 64  SSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKNDE 123
           S K+P DFLKDLPPLPK  F+D+PMLAREYERVRA +PP+ LD +R KLETPP NK+NDE
Sbjct: 63  SFKKPNDFLKDLPPLPKSNFQDNPMLAREYERVRAAKPPIILDFSRDKLETPPVNKRNDE 122

Query: 124 TAWKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQNEKI 183
           TAWKQ LQ+AQC  QHQV RLENL++  KY  + WKQHN++LE LLSRMQKLAQE  EKI
Sbjct: 123 TAWKQALQKAQCSFQHQVFRLENLDVTFKYGSEAWKQHNRRLEVLLSRMQKLAQEHFEKI 182

Query: 184 EKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGWNL 243
           E VNR+RKFHQQN A+EL+ALS QWKELC+KN+EIQ AC+Q+E  I EL+ EAAE+GWNL
Sbjct: 183 EAVNRDRKFHQQNTAFELNALSAQWKELCQKNIEIQAACAQLENHISELKKEAAERGWNL 242

Query: 244 EVNVENGS 251
           E   ENGS
Sbjct: 243 ETGAENGS 250

[Close]
BLAST of CmoCh13G010370 vs. NCBI nr
Match: gi|224135477|ref|XP_002322083.1| (hypothetical protein POPTR_0015s04220g [Populus trichocarpa])

HSP 1 Score: 363.2 bits (931), Expect = 3.7e-97
Identity = 179/249 (71.89%), Postives = 218/249 (87.55%), Query Frame = 1 

Query: 4   NNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRS 63
           N+ +GD+LMLEA P+ S+P W  S++AE+IDALPYIDDDY +P VKAEVDRLVEEEMRRS
Sbjct: 5   NSANGDMLMLEAAPEASRP-WSTSSNAEIIDALPYIDDDYGNPSVKAEVDRLVEEEMRRS 64

Query: 64  SKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYK-LETPPPNKKNDE 123
           SK+P+DFLK+LPP+PKF FE++PMLA+EYERVRAGRPP+ LD +RY  L+ P  NK NDE
Sbjct: 65  SKKPSDFLKELPPVPKFTFENYPMLAKEYERVRAGRPPVTLDFSRYSHLDLPAANKMNDE 124

Query: 124 TAWKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQNEKI 183
           TAWKQ LQRAQ LLQHQV+RLENLELMSKY P++W QHN+QLE +L+R QKLA+EQNEKI
Sbjct: 125 TAWKQALQRAQRLLQHQVIRLENLELMSKYGPEVWIQHNRQLETMLTRTQKLAREQNEKI 184

Query: 184 EKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGWNL 243
           E VNRERK+HQQN AYEL+ALS QWKELC+KN+EIQ AC +IE QI+EL+ E++E+GWN+
Sbjct: 185 EAVNRERKYHQQNTAYELNALSAQWKELCQKNIEIQEACIKIENQIEELKRESSERGWNV 244

Query: 244 EVNVENGSV 252
           E N+ENGS+
Sbjct: 245 EANIENGSL 252

The following BLAST results are available for this feature:
BLAST of CmoCh13G010370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SPF27_ARATH6.9e-8865.57Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana GN=MOS4 PE=1 SV=1[more]
SPF27_XENTR2.0e-2634.43Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis GN=bcas2 PE=2 SV=1[more]
SPF27_DANRE4.4e-2633.98Pre-mRNA-splicing factor SPF27 OS=Danio rerio GN=bcas2 PE=2 SV=1[more]
SPF27_MOUSE5.8e-2634.47Pre-mRNA-splicing factor SPF27 OS=Mus musculus GN=Bcas2 PE=1 SV=1[more]
SPF27_HUMAN5.8e-2634.47Pre-mRNA-splicing factor SPF27 OS=Homo sapiens GN=BCAS2 PE=1 SV=1[more]
BLAST of CmoCh13G010370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQG2_CUCSA1.4e-13595.70Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042680 PE=4 SV=1[more]
A0A067KSC7_JATCU1.1e-10073.41Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05347 PE=4 SV=1[more]
B9IE93_POPTR2.6e-9771.89Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s04220g PE=4 SV=1[more]
V4UKY4_9ROSI1.1e-9571.54Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009263mg PE=4 SV=1[more]
A0A067F653_CITSI1.1e-9571.54Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025332mg PE=4 SV=1[more]
BLAST of CmoCh13G010370 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18165.13.9e-8965.57 modifier of snc1,4[more]
BLAST of CmoCh13G010370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449439443|ref|XP_004137495.1|2.0e-13595.70PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus][more]
gi|659066815|ref|XP_008462680.1|9.9e-13595.31PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis melo][more]
gi|802599707|ref|XP_012072552.1|1.6e-10073.41PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Jatropha curcas][more]
gi|1009131528|ref|XP_015882890.1|1.3e-9772.98PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Ziziphus jujuba][more]
gi|224135477|ref|XP_002322083.1|3.7e-9771.89hypothetical protein POPTR_0015s04220g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008409SPF27
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009870 defense response signaling pathway, resistance gene-dependent
biological_process GO:0010204 defense response signaling pathway, resistance gene-independent
biological_process GO:0042742 defense response to bacterium
biological_process GO:0050832 defense response to fungus
biological_process GO:0006397 mRNA processing
biological_process GO:0001510 RNA methylation
cellular_component GO:0005730 nucleolus
cellular_component GO:0071013 catalytic step 2 spliceosome
cellular_component GO:0071011 precatalytic spliceosome
cellular_component GO:0000974 Prp19 complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh13G010370.1CmoCh13G010370.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008409Pre-mRNA-splicing factor SPF27PFAMPF05700BCAS2coord: 31..237
score: 3.9
NoneNo IPR availableunknownCoilCoilcoord: 214..234
score: -coord: 157..195
scor
NoneNo IPR availablePANTHERPTHR13296BCAS2 PROTEINcoord: 11..253
score: 8.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh13G010370Cucsa.121810Cucumber (Gy14) v1cgycmoB0314
CmoCh13G010370CmaCh13G010010Cucurbita maxima (Rimu)cmacmoB218
CmoCh13G010370CmaCh18G000590Cucurbita maxima (Rimu)cmacmoB399
CmoCh13G010370Cla018468Watermelon (97103) v1cmowmB194
CmoCh13G010370Csa1G042680Cucumber (Chinese Long) v2cmocuB202
CmoCh13G010370MELO3C002120Melon (DHL92) v3.5.1cmomeB180
CmoCh13G010370ClCG04G010780Watermelon (Charleston Gray)cmowcgB191
CmoCh13G010370CSPI01G07080Wild cucumber (PI 183967)cmocpiB204
CmoCh13G010370Lsi02G002200Bottle gourd (USVL1VR-Ls)cmolsiB198
CmoCh13G010370Cp4.1LG09g11170Cucurbita pepo (Zucchini)cmocpeB183
CmoCh13G010370Cp4.1LG20g01510Cucurbita pepo (Zucchini)cmocpeB201
CmoCh13G010370MELO3C002120.2Melon (DHL92) v3.6.1cmomedB202
CmoCh13G010370CsaV3_1G007020Cucumber (Chinese Long) v3cmocucB0234
CmoCh13G010370Cla97C04G077600Watermelon (97103) v2cmowmbB216
CmoCh13G010370Bhi08G001062Wax gourdcmowgoB0258
CmoCh13G010370CsGy1G006890Cucumber (Gy14) v2cgybcmoB067
CmoCh13G010370Carg22734Silver-seed gourdcarcmoB0698
CmoCh13G010370Carg04837Silver-seed gourdcarcmoB0526
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh13G010370CmoCh18G000460Cucurbita moschata (Rifu)cmocmoB171
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh13G010370Wild cucumber (PI 183967)cmocpiB209
CmoCh13G010370Cucumber (Chinese Long) v2cmocuB207
CmoCh13G010370Melon (DHL92) v3.5.1cmomeB191
CmoCh13G010370Watermelon (Charleston Gray)cmowcgB195
CmoCh13G010370Watermelon (97103) v1cmowmB202
CmoCh13G010370Cucurbita pepo (Zucchini)cmocpeB195
CmoCh13G010370Cucurbita pepo (Zucchini)cmocpeB212
CmoCh13G010370Bottle gourd (USVL1VR-Ls)cmolsiB206
CmoCh13G010370Cucumber (Gy14) v2cgybcmoB071
CmoCh13G010370Melon (DHL92) v3.6.1cmomedB213
CmoCh13G010370Silver-seed gourdcarcmoB0810
CmoCh13G010370Silver-seed gourdcarcmoB1065
CmoCh13G010370Cucumber (Chinese Long) v3cmocucB0238
CmoCh13G010370Watermelon (97103) v2cmowmbB222
CmoCh13G010370Wax gourdcmowgoB0278
CmoCh13G010370Cucurbita moschata (Rifu)cmocmoB055
CmoCh13G010370Cucurbita moschata (Rifu)cmocmoB089
CmoCh13G010370Cucumber (Gy14) v1cgycmoB0263
CmoCh13G010370Cucurbita maxima (Rimu)cmacmoB125